BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6159 (67 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|Q1B2I2|Q1B2I2_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DN... 141 2e-32 tr|A3Q721|A3Q721_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DN... 141 2e-32 tr|A1UML6|A1UML6_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DN... 141 2e-32 tr|A0R5E1|A0R5E1_MYCS2 Tax_Id=246196 SubName: Full=Conserved dom... 141 2e-32 tr|Q9KGW0|Q9KGW0_MYCSM Tax_Id=1772 (cspA)SubName: Full=Cold-shoc... 141 2e-32 tr|A1TG69|A1TG69_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DN... 139 9e-32 tr|A4T5R3|A4T5R3_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DN... 139 1e-31 tr|B1MGQ2|B1MGQ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cold... 138 2e-31 tr|O69550|O69550_MYCLE Tax_Id=1769 (cspB)SubName: Full=Putative ... 137 4e-31 tr|B8ZU25|B8ZU25_MYCLB Tax_Id=561304 (cspA)SubName: Full=Putativ... 137 4e-31 tr|B2HJ81|B2HJ81_MYCMM Tax_Id=216594 (cspA_1)SubName: Full=Cold ... 137 4e-31 tr|A0PV86|A0PV86_MYCUA Tax_Id=362242 (cspA_1)SubName: Full=Cold ... 137 4e-31 tr|D5P8S6|D5P8S6_9MYCO Tax_Id=525368 (cspA)SubName: Full=Cold sh... 137 4e-31 sp|P63848|CSPA_MYCTU Tax_Id=1773 (cspA)RecName: Full=Probable co... 135 1e-30 sp|P63849|CSPA_MYCBO Tax_Id=1765 (cspA)RecName: Full=Probable co... 135 1e-30 tr|Q744B8|Q744B8_MYCPA Tax_Id=1770 (cspA)SubName: Full=CspA_1;[M... 135 1e-30 tr|C6DMU9|C6DMU9_MYCTK Tax_Id=478434 SubName: Full=Cold shock pr... 135 1e-30 tr|C1AIA0|C1AIA0_MYCBT Tax_Id=561275 (cspA)SubName: Full=Putativ... 135 1e-30 tr|A5WTL3|A5WTL3_MYCTF Tax_Id=336982 SubName: Full=Cold shock pr... 135 1e-30 tr|A5U8X2|A5U8X2_MYCTA Tax_Id=419947 (cspA)SubName: Full=Putativ... 135 1e-30 tr|A1KPX7|A1KPX7_MYCBP Tax_Id=410289 (cspA)SubName: Full=Probabl... 135 1e-30 tr|A0QA59|A0QA59_MYCA1 Tax_Id=243243 SubName: Full=Conserved dom... 135 1e-30 tr|D6G4Y5|D6G4Y5_MYCTU Tax_Id=478435 SubName: Full=Cold shock pr... 135 1e-30 tr|D6FTQ9|D6FTQ9_MYCTU Tax_Id=611304 SubName: Full=Cold shock pr... 135 1e-30 tr|D6FAJ7|D6FAJ7_MYCTU Tax_Id=611303 SubName: Full=Cold shock pr... 135 1e-30 tr|D6EYZ6|D6EYZ6_MYCTU Tax_Id=611302 SubName: Full=Cold shock pr... 135 1e-30 tr|D5ZMI7|D5ZMI7_MYCTU Tax_Id=537210 SubName: Full=Cold shock pr... 135 1e-30 tr|D5ZAM0|D5ZAM0_MYCTU Tax_Id=537209 SubName: Full=Cold shock pr... 135 1e-30 tr|D5YXR8|D5YXR8_MYCTU Tax_Id=515616 SubName: Full=Cold shock pr... 135 1e-30 tr|D5Y9P5|D5Y9P5_MYCTU Tax_Id=520141 SubName: Full=Cold shock pr... 135 1e-30 tr|D5XNE8|D5XNE8_MYCTU Tax_Id=515617 SubName: Full=Cold shock pr... 135 1e-30 tr|A4KMC0|A4KMC0_MYCTU Tax_Id=395095 SubName: Full=Cold shock pr... 135 1e-30 tr|A2VM31|A2VM31_MYCTU Tax_Id=348776 SubName: Full=Cold shock pr... 135 1e-30 tr|Q5Z2Y3|Q5Z2Y3_NOCFA Tax_Id=37329 SubName: Full=Putative cold ... 129 9e-29 tr|D5PK32|D5PK32_COREQ Tax_Id=525370 (cspA1)SubName: Full=Cold s... 129 1e-28 tr|Q0S8J5|Q0S8J5_RHOSR Tax_Id=101510 (cspA1)SubName: Full=Cold s... 129 2e-28 tr|C1BA05|C1BA05_RHOOB Tax_Id=632772 SubName: Full=Cold shock pr... 129 2e-28 tr|C0ZNG7|C0ZNG7_RHOE4 Tax_Id=234621 SubName: Full=Probable cold... 127 3e-28 tr|C3JWG7|C3JWG7_RHOER Tax_Id=596309 SubName: Full=Putative unch... 127 3e-28 tr|D0LEI4|D0LEI4_GORB4 Tax_Id=526226 SubName: Full=Cold-shock pr... 124 5e-27 tr|Q6NJS3|Q6NJS3_CORDI Tax_Id=1717 (cspA)SubName: Full=Cold-shoc... 122 1e-26 tr|C4LLJ2|C4LLJ2_CORK4 Tax_Id=645127 (cspA)SubName: Full=Cold sh... 122 1e-26 tr|D5UMH9|D5UMH9_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DN... 122 1e-26 tr|D5NVJ7|D5NVJ7_CORAM Tax_Id=649754 SubName: Full=Putative cold... 119 1e-25 tr|C8RV03|C8RV03_CORJE Tax_Id=525262 SubName: Full=Cold shock pr... 119 2e-25 >tr|Q1B2I2|Q1B2I2_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 67 Score = 141 bits (356), Expect = 2e-32 Identities = 67/67 (100%), Positives = 67/67 (100%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVRTI Sbjct: 61 ATGVRTI 67 >tr|A3Q721|A3Q721_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 67 Score = 141 bits (356), Expect = 2e-32 Identities = 67/67 (100%), Positives = 67/67 (100%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVRTI Sbjct: 61 ATGVRTI 67 >tr|A1UML6|A1UML6_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 67 Score = 141 bits (356), Expect = 2e-32 Identities = 67/67 (100%), Positives = 67/67 (100%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVRTI Sbjct: 61 ATGVRTI 67 >tr|A0R5E1|A0R5E1_MYCS2 Tax_Id=246196 SubName: Full=Conserved domain protein;[Mycobacterium smegmatis] Length = 67 Score = 141 bits (356), Expect = 2e-32 Identities = 67/67 (100%), Positives = 67/67 (100%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVRTI Sbjct: 61 ATGVRTI 67 >tr|Q9KGW0|Q9KGW0_MYCSM Tax_Id=1772 (cspA)SubName: Full=Cold-shock protein CspA;[Mycobacterium smegmatis] Length = 67 Score = 141 bits (356), Expect = 2e-32 Identities = 67/67 (100%), Positives = 67/67 (100%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVRTI Sbjct: 61 ATGVRTI 67 >tr|A1TG69|A1TG69_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium vanbaalenii] Length = 67 Score = 139 bits (351), Expect = 9e-32 Identities = 66/67 (98%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR I Sbjct: 61 ATGVRAI 67 >tr|A4T5R3|A4T5R3_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium gilvum] Length = 67 Score = 139 bits (350), Expect = 1e-31 Identities = 65/67 (97%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|B1MGQ2|B1MGQ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cold shock protein A (CspA);[Mycobacterium abscessus] Length = 67 Score = 138 bits (347), Expect = 2e-31 Identities = 64/67 (95%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFEVGQSPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGNGFRTLEENQKVEFEVGQSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|O69550|O69550_MYCLE Tax_Id=1769 (cspB)SubName: Full=Putative cold shock protein; SubName: Full=Small cold-shock protein;[Mycobacterium leprae] Length = 67 Score = 137 bits (345), Expect = 4e-31 Identities = 63/67 (94%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSV 67 >tr|B8ZU25|B8ZU25_MYCLB Tax_Id=561304 (cspA)SubName: Full=Putative cold shock protein;[Mycobacterium leprae] Length = 67 Score = 137 bits (345), Expect = 4e-31 Identities = 63/67 (94%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSV 67 >tr|B2HJ81|B2HJ81_MYCMM Tax_Id=216594 (cspA_1)SubName: Full=Cold shock protein A CspA_1;[Mycobacterium marinum] Length = 67 Score = 137 bits (345), Expect = 4e-31 Identities = 63/67 (94%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSV 67 >tr|A0PV86|A0PV86_MYCUA Tax_Id=362242 (cspA_1)SubName: Full=Cold shock protein A CspA_1;[Mycobacterium ulcerans] Length = 67 Score = 137 bits (345), Expect = 4e-31 Identities = 63/67 (94%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSV 67 >tr|D5P8S6|D5P8S6_9MYCO Tax_Id=525368 (cspA)SubName: Full=Cold shock protein CspA;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 67 Score = 137 bits (345), Expect = 4e-31 Identities = 63/67 (94%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSV 67 >sp|P63848|CSPA_MYCTU Tax_Id=1773 (cspA)RecName: Full=Probable cold shock protein A;[Mycobacterium tuberculosis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >sp|P63849|CSPA_MYCBO Tax_Id=1765 (cspA)RecName: Full=Probable cold shock protein A;[Mycobacterium bovis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|Q744B8|Q744B8_MYCPA Tax_Id=1770 (cspA)SubName: Full=CspA_1;[Mycobacterium paratuberculosis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|C6DMU9|C6DMU9_MYCTK Tax_Id=478434 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|C1AIA0|C1AIA0_MYCBT Tax_Id=561275 (cspA)SubName: Full=Putative cold shock protein A;[Mycobacterium bovis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A5WTL3|A5WTL3_MYCTF Tax_Id=336982 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A5U8X2|A5U8X2_MYCTA Tax_Id=419947 (cspA)SubName: Full=Putative cold shock protein A;[Mycobacterium tuberculosis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A1KPX7|A1KPX7_MYCBP Tax_Id=410289 (cspA)SubName: Full=Probable cold shock protein A cspA;[Mycobacterium bovis] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A0QA59|A0QA59_MYCA1 Tax_Id=243243 SubName: Full=Conserved domain protein;[Mycobacterium avium] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D6G4Y5|D6G4Y5_MYCTU Tax_Id=478435 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis KZN 605] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D6FTQ9|D6FTQ9_MYCTU Tax_Id=611304 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis K85] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D6FAJ7|D6FAJ7_MYCTU Tax_Id=611303 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis CPHL_A] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D6EYZ6|D6EYZ6_MYCTU Tax_Id=611302 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis T46] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D5ZMI7|D5ZMI7_MYCTU Tax_Id=537210 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis T17] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D5ZAM0|D5ZAM0_MYCTU Tax_Id=537209 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis GM 1503] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D5YXR8|D5YXR8_MYCTU Tax_Id=515616 SubName: Full=Cold shock protein A;[Mycobacterium tuberculosis 02_1987] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D5Y9P5|D5Y9P5_MYCTU Tax_Id=520141 SubName: Full=Cold shock protein A;[Mycobacterium tuberculosis T85] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|D5XNE8|D5XNE8_MYCTU Tax_Id=515617 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis T92] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A4KMC0|A4KMC0_MYCTU Tax_Id=395095 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis str. Haarlem] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|A2VM31|A2VM31_MYCTU Tax_Id=348776 SubName: Full=Cold shock protein A cspA;[Mycobacterium tuberculosis C] Length = 67 Score = 135 bits (341), Expect = 1e-30 Identities = 62/67 (92%), Positives = 66/67 (98%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQG+GFRTLEENQKVEFE+G SPKGPQ Sbjct: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEIGHSPKGPQ 60 Query: 61 ATGVRTI 67 ATGVR++ Sbjct: 61 ATGVRSL 67 >tr|Q5Z2Y3|Q5Z2Y3_NOCFA Tax_Id=37329 SubName: Full=Putative cold shock protein;[Nocardia farcinica] Length = 68 Score = 129 bits (325), Expect = 9e-29 Identities = 61/67 (91%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQGSGFRTLEENQKVEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQKVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAL 67 >tr|D5PK32|D5PK32_COREQ Tax_Id=525370 (cspA1)SubName: Full=Cold shock protein A;[Rhodococcus equi ATCC 33707] Length = 67 Score = 129 bits (324), Expect = 1e-28 Identities = 61/67 (91%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQGSGFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR I Sbjct: 61 ATGVRAI 67 >tr|Q0S8J5|Q0S8J5_RHOSR Tax_Id=101510 (cspA1)SubName: Full=Cold shock protein A;[Rhodococcus sp.] Length = 67 Score = 129 bits (323), Expect = 2e-28 Identities = 60/67 (89%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQGSGFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|C1BA05|C1BA05_RHOOB Tax_Id=632772 SubName: Full=Cold shock protein;[Rhodococcus opacus] Length = 67 Score = 129 bits (323), Expect = 2e-28 Identities = 60/67 (89%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQGSGFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|C0ZNG7|C0ZNG7_RHOE4 Tax_Id=234621 SubName: Full=Probable cold shock protein;[Rhodococcus erythropolis] Length = 67 Score = 127 bits (320), Expect = 3e-28 Identities = 59/67 (88%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQG+GFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|C3JWG7|C3JWG7_RHOER Tax_Id=596309 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis SK121] Length = 67 Score = 127 bits (320), Expect = 3e-28 Identities = 59/67 (88%), Positives = 63/67 (94%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQG+GFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|D0LEI4|D0LEI4_GORB4 Tax_Id=526226 SubName: Full=Cold-shock protein DNA-binding protein;[Gordonia bronchialis] Length = 67 Score = 124 bits (310), Expect = 5e-27 Identities = 57/67 (85%), Positives = 62/67 (92%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAP++GS DVFVHY+EIQGSGFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPDEGSDDVFVHYSEIQGSGFRTLEENQRVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAV 67 >tr|Q6NJS3|Q6NJS3_CORDI Tax_Id=1717 (cspA)SubName: Full=Cold-shock protein;[Corynebacterium diphtheriae] Length = 67 Score = 122 bits (307), Expect = 1e-26 Identities = 58/67 (86%), Positives = 61/67 (91%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQG+GFRTLEENQKVEFEVG+ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEENQKVEFEVGEGAKGPQ 60 Query: 61 ATGVRTI 67 A VR I Sbjct: 61 AQQVRAI 67 >tr|C4LLJ2|C4LLJ2_CORK4 Tax_Id=645127 (cspA)SubName: Full=Cold shock protein;[Corynebacterium kroppenstedtii] Length = 67 Score = 122 bits (306), Expect = 1e-26 Identities = 57/67 (85%), Positives = 60/67 (89%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGS DVFVHYTEIQGSGFRTLEENQKVEFE+G+ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSQDVFVHYTEIQGSGFRTLEENQKVEFEIGEGAKGPQ 60 Query: 61 ATGVRTI 67 A VR + Sbjct: 61 AQHVRAL 67 >tr|D5UMH9|D5UMH9_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DNA-binding domain protein;[Tsukamurella paurometabola DSM 20162] Length = 67 Score = 122 bits (306), Expect = 1e-26 Identities = 57/67 (85%), Positives = 61/67 (91%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAP DGS DVFVHY+EIQG+GFRTLEENQ+VEFEVGQ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPADGSDDVFVHYSEIQGNGFRTLEENQQVEFEVGQGTKGPQ 60 Query: 61 ATGVRTI 67 ATGVR + Sbjct: 61 ATGVRAL 67 >tr|D5NVJ7|D5NVJ7_CORAM Tax_Id=649754 SubName: Full=Putative cold shock protein;[Corynebacterium ammoniagenes DSM 20306] Length = 67 Score = 119 bits (298), Expect = 1e-25 Identities = 54/67 (80%), Positives = 60/67 (89%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAPEDGSADVFVHY+EIQG+GFRTLEENQ+V FE+G+ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEENQQVSFEIGEGQKGPQ 60 Query: 61 ATGVRTI 67 AT V + Sbjct: 61 ATNVNAL 67 >tr|C8RV03|C8RV03_CORJE Tax_Id=525262 SubName: Full=Cold shock protein;[Corynebacterium jeikeium ATCC 43734] Length = 67 Score = 119 bits (297), Expect = 2e-25 Identities = 54/67 (80%), Positives = 60/67 (89%) Query: 1 MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEVGQSPKGPQ 60 M QGTVKWFNAEKGFGFIAP+DGS+DVFVHY+EIQGSGFRTLEENQKVEFE+G+ KGPQ Sbjct: 1 MAQGTVKWFNAEKGFGFIAPDDGSSDVFVHYSEIQGSGFRTLEENQKVEFEIGEGAKGPQ 60 Query: 61 ATGVRTI 67 A V + Sbjct: 61 AQNVTAL 67 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.315 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 593,811,923 Number of extensions: 20170411 Number of successful extensions: 44336 Number of sequences better than 10.0: 6789 Number of HSP's gapped: 41707 Number of HSP's successfully gapped: 7004 Length of query: 67 Length of database: 4,236,830,644 Length adjustment: 39 Effective length of query: 28 Effective length of database: 3,749,023,948 Effective search space: 104972670544 Effective search space used: 104972670544 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 75 (33.5 bits)