BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6275 (337 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R5Q6|A0R5Q6_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 654 0.0 tr|A3Q7A4|A3Q7A4_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 493 e-137 tr|Q1B280|Q1B280_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 492 e-137 tr|A1UMX0|A1UMX0_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 492 e-137 tr|A1TGI5|A1TGI5_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 490 e-136 tr|A4T616|A4T616_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 476 e-132 tr|D5P920|D5P920_9MYCO Tax_Id=525368 (dnaQ)SubName: Full=DNA-dir... 462 e-128 tr|B2HKD6|B2HKD6_MYCMM Tax_Id=216594 (dnaQ)SubName: Full=DNA pol... 461 e-128 tr|A0PVE9|A0PVE9_MYCUA Tax_Id=362242 (dnaQ)SubName: Full=DNA pol... 458 e-127 tr|Q744M8|Q744M8_MYCPA Tax_Id=1770 (dnaQ)SubName: Full=DnaQ;[Myc... 456 e-126 tr|A0Q9T8|A0Q9T8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 454 e-126 tr|B1MFM8|B1MFM8_MYCA9 Tax_Id=561007 SubName: Full=DNA polymeras... 423 e-116 tr|O69678|O69678_MYCTU Tax_Id=1773 (dnaQ)SubName: Full=PROBABLE ... 422 e-116 tr|A5U937|A5U937_MYCTA Tax_Id=419947 (dnaQ)SubName: Full=DNA pol... 422 e-116 tr|D5XNL5|D5XNL5_MYCTU Tax_Id=515617 SubName: Full=DNA polymeras... 422 e-116 tr|A5WTS9|A5WTS9_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 422 e-116 tr|Q7D508|Q7D508_MYCTU Tax_Id=1773 (dnaQ)SubName: Full=DNA polym... 422 e-116 tr|D5ZAT6|D5ZAT6_MYCTU Tax_Id=537209 SubName: Full=DNA polymeras... 422 e-116 tr|A4KMH8|A4KMH8_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 422 e-116 tr|A2VM93|A2VM93_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 422 e-116 tr|Q7TVV5|Q7TVV5_MYCBO Tax_Id=1765 (dnaQ)SubName: Full=PUTATIVE ... 421 e-116 tr|C1AIG5|C1AIG5_MYCBT Tax_Id=561275 (dnaQ)SubName: Full=DNA pol... 421 e-116 tr|A1KQ43|A1KQ43_MYCBP Tax_Id=410289 (dnaQ)SubName: Full=Putativ... 421 e-116 tr|D6FAR5|D6FAR5_MYCTU Tax_Id=611303 SubName: Full=DNA polymeras... 421 e-116 tr|D6FTX6|D6FTX6_MYCTU Tax_Id=611304 SubName: Full=DNA polymeras... 420 e-115 tr|D5YXY4|D5YXY4_MYCTU Tax_Id=515616 SubName: Full=DNA polymeras... 419 e-115 tr|D5Y9W3|D5Y9W3_MYCTU Tax_Id=520141 SubName: Full=DNA polymeras... 419 e-115 tr|C6DNF1|C6DNF1_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 419 e-115 tr|D6G5I7|D6G5I7_MYCTU Tax_Id=478435 SubName: Full=DNA polymeras... 419 e-115 tr|D6EZ64|D6EZ64_MYCTU Tax_Id=611302 SubName: Full=DNA polymeras... 418 e-115 tr|D5YLG1|D5YLG1_MYCTU Tax_Id=520140 SubName: Full=DNA polymeras... 417 e-114 tr|D5ZMQ7|D5ZMQ7_MYCTU Tax_Id=537210 SubName: Full=DNA polymeras... 377 e-103 tr|D1AAU1|D1AAU1_THECD Tax_Id=471852 SubName: Full=DNA polymeras... 224 1e-56 tr|Q0SFP4|Q0SFP4_RHOSR Tax_Id=101510 SubName: Full=Probable DNA ... 221 1e-55 tr|A8LH88|A8LH88_FRASN Tax_Id=298653 SubName: Full=Exonuclease R... 219 3e-55 tr|D6A900|D6A900_9ACTO Tax_Id=566461 SubName: Full=Putative unch... 218 9e-55 tr|D3DAS5|D3DAS5_9ACTO Tax_Id=102897 SubName: Full=Exonuclease R... 216 3e-54 tr|C9ZG17|C9ZG17_STRSW Tax_Id=680198 SubName: Full=Putative DNA ... 210 2e-52 tr|D1BFD5|D1BFD5_SANKS Tax_Id=446469 SubName: Full=DNA polymeras... 207 1e-51 tr|C9NHS4|C9NHS4_9ACTO Tax_Id=591167 SubName: Full=DNA polymeras... 207 2e-51 tr|D6K0X7|D6K0X7_9ACTO Tax_Id=645465 SubName: Full=DNA polymeras... 206 5e-51 tr|B5GGH4|B5GGH4_9ACTO Tax_Id=465543 SubName: Full=DNA polymeras... 204 1e-50 tr|D6AU76|D6AU76_STRFL Tax_Id=457431 SubName: Full=Putative unch... 202 4e-50 tr|D0L8D9|D0L8D9_GORB4 Tax_Id=526226 SubName: Full=Exonuclease R... 202 5e-50 tr|D5ZPY6|D5ZPY6_9ACTO Tax_Id=566461 SubName: Full=DNA polymeras... 201 9e-50 >tr|A0R5Q6|A0R5Q6_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III subunit epsilon;[Mycobacterium smegmatis] Length = 337 Score = 654 bits (1686), Expect = 0.0 Identities = 325/337 (96%), Positives = 325/337 (96%) Query: 1 MSRAPLSSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS 60 MSRAPLSSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS Sbjct: 1 MSRAPLSSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS 60 Query: 61 SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXX 120 SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSF Sbjct: 61 SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFLAAEA 120 Query: 121 XXXXXXXPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK 180 PIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK Sbjct: 121 ELVGAELPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK 180 Query: 181 PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV 240 PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV Sbjct: 181 PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV 240 Query: 241 QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV 300 QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV Sbjct: 241 QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV 300 Query: 301 PLVRDDEFMRLLDHVVGGADVETFVDTTADGDQYALF 337 PLVRDDEFMRLLDHVVGGADVETFVDTTADGDQYALF Sbjct: 301 PLVRDDEFMRLLDHVVGGADVETFVDTTADGDQYALF 337 >tr|A3Q7A4|A3Q7A4_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 330 Score = 493 bits (1269), Expect = e-137 Identities = 236/325 (72%), Positives = 275/325 (84%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA + G+GWAVVDVET+GFRPGQARIVS+AALAVGDDG+VE S+++LLNPGVDPGPT Sbjct: 6 WGRPAVDTGTGWAVVDVETSGFRPGQARIVSLAALAVGDDGNVEQSLATLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTAEMLEG P F D+V +L E+LRGRTLVAHN GFDYSF PID+ Sbjct: 66 HVHGLTAEMLEGAPRFGDIVADLAELLRGRTLVAHNVGFDYSFLTAEAELVGAELPIDSV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LGTENLRLETLAAHWGV Q+KPHDALDDA VLAQILKPTLARAR+R+ W Sbjct: 126 MCTVELARRLDLGTENLRLETLAAHWGVPQLKPHDALDDAQVLAQILKPTLARARERRAW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP R ++R+RWPNG VTHD+L PL++ A+RLPC Y NPG F+AGRPLV+GMRVA++AEV Sbjct: 186 LPTRSVSRRRWPNGRVTHDDLHPLRMVAARLPCAYLNPGRFIAGRPLVKGMRVAVAAEVT 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RT+EEL+ER+L AGLAY+D VD +TSLVICN P EQGKGYQA+ELGVP++ D +F+R L Sbjct: 246 RTYEELIERLLTAGLAYTDAVDTETSLVICNQPDVEQGKGYQAQELGVPVLSDADFLRAL 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 DHVVGG +E F D T GDQ+ALF Sbjct: 306 DHVVGGTGIEEFFDATTVGDQFALF 330 >tr|Q1B280|Q1B280_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 330 Score = 492 bits (1267), Expect = e-137 Identities = 236/325 (72%), Positives = 275/325 (84%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA + G+GWAVVDVET+GFRPGQARIVS+AALAVGDDG+VE S+++LLNPGVDPGPT Sbjct: 6 WGRPAVDTGTGWAVVDVETSGFRPGQARIVSLAALAVGDDGNVEQSLATLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTAEMLEG P F DVV +L E+LRGRTLVAHN GFDYSF PID+ Sbjct: 66 HVHGLTAEMLEGAPRFGDVVADLAELLRGRTLVAHNVGFDYSFLTAEAELVGAELPIDSV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LGTENLRLETLAAHWGV Q+KPHDALDDA VLAQILKPTLARAR+R+ W Sbjct: 126 MCTVELARRLDLGTENLRLETLAAHWGVPQLKPHDALDDAQVLAQILKPTLARARERRAW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP R ++R+RWPNG VTHD+L PL++ A+RLPC Y NPG ++AGRPLV+GMRVA++AEV Sbjct: 186 LPTRSVSRRRWPNGRVTHDDLHPLRMVAARLPCAYLNPGRYIAGRPLVKGMRVAVAAEVT 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RT+EEL+ER+L AGLAY+D VD +TSLVICN P EQGKGYQA+ELGVP++ D +F+R L Sbjct: 246 RTYEELIERLLTAGLAYTDAVDTETSLVICNQPDVEQGKGYQAQELGVPVLSDADFLRAL 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 DHVVGG +E F D T GDQ+ALF Sbjct: 306 DHVVGGTGIEEFFDATTVGDQFALF 330 >tr|A1UMX0|A1UMX0_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 330 Score = 492 bits (1267), Expect = e-137 Identities = 236/325 (72%), Positives = 275/325 (84%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA + G+GWAVVDVET+GFRPGQARIVS+AALAVGDDG+VE S+++LLNPGVDPGPT Sbjct: 6 WGRPAVDTGTGWAVVDVETSGFRPGQARIVSLAALAVGDDGNVEQSLATLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTAEMLEG P F DVV +L E+LRGRTLVAHN GFDYSF PID+ Sbjct: 66 HVHGLTAEMLEGAPRFGDVVADLAELLRGRTLVAHNVGFDYSFLTAEAELVGAELPIDSV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LGTENLRLETLAAHWGV Q+KPHDALDDA VLAQILKPTLARAR+R+ W Sbjct: 126 MCTVELARRLDLGTENLRLETLAAHWGVPQLKPHDALDDAQVLAQILKPTLARARERRAW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP R ++R+RWPNG VTHD+L PL++ A+RLPC Y NPG ++AGRPLV+GMRVA++AEV Sbjct: 186 LPTRSVSRRRWPNGRVTHDDLHPLRMVAARLPCAYLNPGRYIAGRPLVKGMRVAVAAEVT 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RT+EEL+ER+L AGLAY+D VD +TSLVICN P EQGKGYQA+ELGVP++ D +F+R L Sbjct: 246 RTYEELIERLLTAGLAYTDAVDTETSLVICNQPDVEQGKGYQAQELGVPVLSDADFLRAL 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 DHVVGG +E F D T GDQ+ALF Sbjct: 306 DHVVGGTGIEEFFDATTVGDQFALF 330 >tr|A1TGI5|A1TGI5_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 333 Score = 490 bits (1261), Expect = e-136 Identities = 235/331 (70%), Positives = 273/331 (82%) Query: 7 SSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPG 66 S+ WGRPAD+PG+GWAVVDVET+GFRPGQARIVSVAALA+ DDG+VE S+ SLL+PG Sbjct: 3 STAGSRWGRPADQPGAGWAVVDVETSGFRPGQARIVSVAALALSDDGNVEKSLYSLLDPG 62 Query: 67 VDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXX 126 VDPGPTHVHGLTAEML GQP F DVV +LIEVLRGRTLVAHN GFDYSF Sbjct: 63 VDPGPTHVHGLTAEMLAGQPAFGDVVGDLIEVLRGRTLVAHNVGFDYSFLTAEAEMVHAE 122 Query: 127 XPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARA 186 P+DT MCTVELARRL+LG +NLRLETLAAHWGVTQMKPHDALDDA+VLAQILKP L RA Sbjct: 123 LPVDTVMCTVELARRLDLGLDNLRLETLAAHWGVTQMKPHDALDDAMVLAQILKPVLVRA 182 Query: 187 RDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVA 246 ++R+ WLP+ ++R+ WPNG +THDE RPLK A+R+PC YANPG FVAGRPLVQGMRVA Sbjct: 183 QERRKWLPVHPVSRRTWPNGRITHDEFRPLKALAARMPCAYANPGVFVAGRPLVQGMRVA 242 Query: 247 LSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDD 306 LSAEV THEEL+ER+LHAGLA++++VD TSLV+C+DPAPEQGKGYQA GVP + Sbjct: 243 LSAEVGHTHEELVERILHAGLAFTEVVDGHTSLVVCDDPAPEQGKGYQAGGFGVPTLGSA 302 Query: 307 EFMRLLDHVVGGADVETFVDTTADGDQYALF 337 EF+R LD V+GG+ +E F D + GDQ+ LF Sbjct: 303 EFLRHLDTVIGGSAIEEFADQASAGDQFTLF 333 >tr|A4T616|A4T616_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 345 Score = 476 bits (1224), Expect = e-132 Identities = 231/331 (69%), Positives = 271/331 (81%) Query: 7 SSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPG 66 S+ + WGRPA E G+GWAVVDVET+GFRPGQARIVSVAALA+ DDG+VE S+ SLL+PG Sbjct: 15 STAGRRWGRPAHEDGAGWAVVDVETSGFRPGQARIVSVAALALSDDGNVEKSLYSLLDPG 74 Query: 67 VDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXX 126 VDPGPTHVHGLTAEMLEGQP F DVV +L EVLRGRTLVAHN GFDYSF Sbjct: 75 VDPGPTHVHGLTAEMLEGQPTFGDVVGDLCEVLRGRTLVAHNVGFDYSFLSAEAELVGAE 134 Query: 127 XPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARA 186 PIDT MCTVELARRL+LG ENLRLETLAAHWGVTQM+PHDALDDA+VLAQILKP L RA Sbjct: 135 LPIDTVMCTVELARRLDLGLENLRLETLAAHWGVTQMRPHDALDDAMVLAQILKPVLVRA 194 Query: 187 RDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVA 246 ++R+ WLP+ + R+ WPNG VTHDE RPLK A+R+ C YANPG FV+GRPLVQGMRVA Sbjct: 195 QERRKWLPVHPVGRRTWPNGRVTHDEFRPLKALAARMACPYANPGRFVSGRPLVQGMRVA 254 Query: 247 LSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDD 306 L+AEV T++EL+ER++HAGLAY++ VD TSLV+C+ APEQGKGYQA E GVP++ D Sbjct: 255 LAAEVGHTYDELIERIVHAGLAYTESVDAFTSLVVCDAAAPEQGKGYQAGEFGVPMLPSD 314 Query: 307 EFMRLLDHVVGGADVETFVDTTADGDQYALF 337 EF++ LD V+GG+ VE F + + GDQ+ALF Sbjct: 315 EFLQRLDAVIGGSAVEEFAEPSPAGDQFALF 345 >tr|D5P920|D5P920_9MYCO Tax_Id=525368 (dnaQ)SubName: Full=DNA-directed DNA polymerase III epsilon subunit; EC=2.7.7.7; Flags: Fragment;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 330 Score = 462 bits (1188), Expect = e-128 Identities = 221/325 (68%), Positives = 258/325 (79%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA EP GWAV+DVET+GFRPGQAR++S+A L + DDG VE S+ SLLNPGVDPGPT Sbjct: 6 WGRPASEPDGGWAVIDVETSGFRPGQARVISLAVLGLDDDGRVEQSVVSLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA MLE QP FADVVD++++VL GRTLVAHN FDY+F PID+ Sbjct: 66 HVHGLTAAMLEDQPQFADVVDDVVKVLDGRTLVAHNVAFDYAFLAAEAELAEAELPIDSV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA+VL +L L RAR R +W Sbjct: 126 MCTVELARRLDLGIDNLRLETLAAHWGVPQERPHDAFDDAMVLTGVLASALERARQRDIW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLKV ASR+PC Y NPG +V GRPLVQGMRVAL+AEV Sbjct: 186 LPVHPVTRRRWPNGRVTHDELRPLKVLASRMPCPYLNPGHYVRGRPLVQGMRVALAAEVG 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD VD +TSLVICNDPAP+QGKGY A++LG+P++ D +FM + Sbjct: 246 RTHEELVERILHAGLAYSDAVDRETSLVICNDPAPDQGKGYLARQLGIPVISDAQFMESV 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGG +E F DTT Q ALF Sbjct: 306 CAVVGGTSMEEFTDTTTLDQQLALF 330 >tr|B2HKD6|B2HKD6_MYCMM Tax_Id=216594 (dnaQ)SubName: Full=DNA polymerase III (Epsilon subunit) DnaQ;[Mycobacterium marinum] Length = 329 Score = 461 bits (1185), Expect = e-128 Identities = 223/327 (68%), Positives = 259/327 (79%) Query: 11 QLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPG 70 Q WGRPA PG GWAVVDVET+GFRPG AR++SVAAL + G+VEHS+ SLLNPGVDPG Sbjct: 3 QNWGRPASHPGEGWAVVDVETSGFRPGHARVISVAALGLDAAGNVEHSVVSLLNPGVDPG 62 Query: 71 PTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPID 130 PTHVHGLTA MLE QP FAD+V +L E+LRGRTLVAHN FDYSF P+D Sbjct: 63 PTHVHGLTAAMLEDQPQFADIVGDLTELLRGRTLVAHNVAFDYSFLAAEAELADAELPVD 122 Query: 131 TAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRK 190 + MCTVELARRLELG +NLRLETLAAHWGVTQ +PHDA DDALVL+ IL P L RAR+R Sbjct: 123 SVMCTVELARRLELGIDNLRLETLAAHWGVTQERPHDAFDDALVLSGILAPALQRARERD 182 Query: 191 VWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAE 250 VWLP+ +TR+RWPNG VTHDELRPLK ASR+PC Y NPG +V RPLVQGMRVAL+AE Sbjct: 183 VWLPIHPVTRRRWPNGRVTHDELRPLKALASRMPCPYLNPGRYVCDRPLVQGMRVALAAE 242 Query: 251 VVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMR 310 V RTHEEL+ER+LHAGLAYSD VD +TSLV+CN+ AP+QGKGY A++LGVP++ D +FM Sbjct: 243 VGRTHEELVERILHAGLAYSDGVDRETSLVVCNEDAPDQGKGYHARQLGVPVLTDTQFMD 302 Query: 311 LLDHVVGGADVETFVDTTADGDQYALF 337 + V+GG E F D T +Q+ALF Sbjct: 303 RVGCVLGGTSAEKFTDHTLVEEQFALF 329 >tr|A0PVE9|A0PVE9_MYCUA Tax_Id=362242 (dnaQ)SubName: Full=DNA polymerase III (Epsilon subunit) DnaQ;[Mycobacterium ulcerans] Length = 329 Score = 458 bits (1178), Expect = e-127 Identities = 222/327 (67%), Positives = 258/327 (78%) Query: 11 QLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPG 70 Q WGRPA PG GWAVVDVET+GFRPG AR++SVAAL + G+VEHS+ SLLNPG DPG Sbjct: 3 QNWGRPASHPGEGWAVVDVETSGFRPGHARVISVAALGLDAAGNVEHSVVSLLNPGGDPG 62 Query: 71 PTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPID 130 PTHVHGLTA MLE QP FAD+V +L E+LRGRTLVAHN FDYSF P+D Sbjct: 63 PTHVHGLTAAMLEDQPQFADIVGDLTELLRGRTLVAHNVAFDYSFLAAEAELTDAELPVD 122 Query: 131 TAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRK 190 + MCTVELARRLELG +NLRLETLAAHWGVTQ +PHDA DDALVL+ IL P L RAR+R Sbjct: 123 SVMCTVELARRLELGIDNLRLETLAAHWGVTQERPHDAFDDALVLSGILAPALQRARERD 182 Query: 191 VWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAE 250 VWLP+ +TR+RWPNG VTHDELRPLK ASR+PC Y NPG +V RPLVQGMRVAL+AE Sbjct: 183 VWLPIHPVTRRRWPNGRVTHDELRPLKALASRMPCPYLNPGRYVCDRPLVQGMRVALAAE 242 Query: 251 VVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMR 310 V RTHEEL+ER+LHAGLAYSD VD +TSLV+CN+ AP+QGKGY A++LGVP++ D +FM Sbjct: 243 VGRTHEELVERILHAGLAYSDGVDRETSLVVCNEDAPDQGKGYHARQLGVPVLTDTQFMD 302 Query: 311 LLDHVVGGADVETFVDTTADGDQYALF 337 + V+GG E F D T +Q+ALF Sbjct: 303 RVGCVLGGTSAEKFTDHTLVEEQFALF 329 >tr|Q744M8|Q744M8_MYCPA Tax_Id=1770 (dnaQ)SubName: Full=DnaQ;[Mycobacterium paratuberculosis] Length = 329 Score = 456 bits (1174), Expect = e-126 Identities = 217/325 (66%), Positives = 257/325 (79%), Gaps = 1/325 (0%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA EP +GWAV+DVET+GFRPGQARI+S+A L + G VE S+ SLLNPGVDPGPT Sbjct: 6 WGRPASEPDAGWAVIDVETSGFRPGQARIISLAVLGLDAGGKVEQSVVSLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA MLE QP FAD+ +++EVLRGRTLVAHN FDY+F P+DT Sbjct: 66 HVHGLTAAMLEDQPQFADIAGDVVEVLRGRTLVAHNVAFDYAFLAAEAELAGIELPVDTV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGVTQ +PHDA DDA+VL +L L RAR+R +W Sbjct: 126 MCTVELARRLDLGIDNLRLETLAAHWGVTQQRPHDAFDDAMVLTGVLASALQRARERDIW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLKV ASR+PC Y NPGP+V GRPLVQGMRVAL+AEV Sbjct: 186 LPVHPVTRRRWPNGRVTHDELRPLKVLASRMPCPYLNPGPYVGGRPLVQGMRVALAAEVE 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD VD +TSLV+CNDPA E GKGY A++LGVP++ D +F+ + Sbjct: 246 RTHEELVERILHAGLAYSDTVDRETSLVVCNDPAAEHGKGYLARQLGVPVISDAQFLDCV 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 V+GG ++ F D T D Q ALF Sbjct: 306 RAVIGGTSMDEFTDATPD-PQLALF 329 >tr|A0Q9T8|A0Q9T8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III subunit epsilon;[Mycobacterium avium] Length = 329 Score = 454 bits (1168), Expect = e-126 Identities = 216/325 (66%), Positives = 257/325 (79%), Gaps = 1/325 (0%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA EP +GWAV+DVET+GFRPGQARI+S+A L + G VE S+ SLLNPGVDPGPT Sbjct: 6 WGRPASEPDAGWAVIDVETSGFRPGQARIISLAVLGLDAGGKVEQSVVSLLNPGVDPGPT 65 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA MLE QP FAD+ +++EVLRGRTLVAHN FDY+F P+DT Sbjct: 66 HVHGLTAAMLEDQPQFADIAGDVVEVLRGRTLVAHNVAFDYAFLAAEAELAGIELPVDTV 125 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAA+WGVTQ +PHDA DDA+VL +L L RAR+R +W Sbjct: 126 MCTVELARRLDLGIDNLRLETLAAYWGVTQQRPHDAFDDAMVLTGVLASALQRARERDIW 185 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLKV ASR+PC Y NPGP+V GRPLVQGMRVAL+AEV Sbjct: 186 LPVHPVTRRRWPNGRVTHDELRPLKVLASRMPCPYLNPGPYVGGRPLVQGMRVALAAEVE 245 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD VD +TSLV+CNDPA E GKGY A++LGVP++ D +F+ + Sbjct: 246 RTHEELVERILHAGLAYSDTVDRETSLVVCNDPAAEHGKGYLARQLGVPVISDAQFLDCV 305 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 V+GG ++ F D T D Q ALF Sbjct: 306 RAVIGGTSMDEFTDATPD-PQLALF 329 >tr|B1MFM8|B1MFM8_MYCA9 Tax_Id=561007 SubName: Full=DNA polymerase III, epsilon subunit (DnaQ);[Mycobacterium abscessus] Length = 327 Score = 423 bits (1087), Expect = e-116 Identities = 207/326 (63%), Positives = 246/326 (75%), Gaps = 1/326 (0%) Query: 12 LWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGP 71 +WG+ D W VVD+ET+GF+PG+AR++SVAALA+ DG++ S+ SLLNPGVDPGP Sbjct: 3 IWGQTPDHSPK-WVVVDLETSGFQPGRARVISVAALAMDADGTITDSVVSLLNPGVDPGP 61 Query: 72 THVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDT 131 THVHGLT EMLEGQP F+D+ +LI +LRGRTLVAHN GFDYSF P + Sbjct: 62 THVHGLTPEMLEGQPEFSDIAPDLIALLRGRTLVAHNVGFDYSFLAAEAELVGAELPTEA 121 Query: 132 AMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKV 191 MCTVEL RRLEL T NLRLETLAAHWGV Q+K HDA DDA VLA++L L RAR+R Sbjct: 122 VMCTVELTRRLELDTPNLRLETLAAHWGVEQLKAHDAYDDARVLAEVLPKVLERARERGT 181 Query: 192 WLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEV 251 WLP+R+ TRKRWPNG VTHDELRPLK ASR PC + NPGP+ AG+PLVQGMRVALS+EV Sbjct: 182 WLPIRETTRKRWPNGRVTHDELRPLKTLASRQPCHWLNPGPYTAGQPLVQGMRVALSSEV 241 Query: 252 VRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRL 311 RTHEEL+E+++ AGLAY+D VD TSLVICN PEQGKG+ A+ LGVPL+ D FM Sbjct: 242 SRTHEELIEQIMQAGLAYADAVDEDTSLVICNQENPEQGKGFHARSLGVPLLDDRTFMTE 301 Query: 312 LDHVVGGADVETFVDTTADGDQYALF 337 + VVGG D+E F + G QY+LF Sbjct: 302 VRRVVGGTDIEQFTVPSRAGAQYSLF 327 >tr|O69678|O69678_MYCTU Tax_Id=1773 (dnaQ)SubName: Full=PROBABLE DNA POLYMERASE III (EPSILON SUBUNIT) DNAQ; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 329 Score = 422 bits (1086), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKAVAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|A5U937|A5U937_MYCTA Tax_Id=419947 (dnaQ)SubName: Full=DNA polymerase III subunit epsilon DnaQ;[Mycobacterium tuberculosis] Length = 329 Score = 422 bits (1086), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKAVAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D5XNL5|D5XNL5_MYCTU Tax_Id=515617 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis T92] Length = 329 Score = 422 bits (1086), Expect = e-116 Identities = 206/325 (63%), Positives = 241/325 (74%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN+ APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNETAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|A5WTS9|A5WTS9_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis] Length = 329 Score = 422 bits (1085), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|Q7D508|Q7D508_MYCTU Tax_Id=1773 (dnaQ)SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 329 Score = 422 bits (1085), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D5ZAT6|D5ZAT6_MYCTU Tax_Id=537209 SubName: Full=DNA polymerase III (Epsilon subunit) dnaQ;[Mycobacterium tuberculosis GM 1503] Length = 329 Score = 422 bits (1085), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|A4KMH8|A4KMH8_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Epsilon subunit) dnaQ;[Mycobacterium tuberculosis str. Haarlem] Length = 329 Score = 422 bits (1085), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|A2VM93|A2VM93_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Epsilon subunit) dnaQ;[Mycobacterium tuberculosis C] Length = 329 Score = 422 bits (1085), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GTVVGGASVEDFTDVAPVEKQLALF 329 >tr|Q7TVV5|Q7TVV5_MYCBO Tax_Id=1765 (dnaQ)SubName: Full=PUTATIVE DNA POLYMERASE III (EPSILON SUBUNIT) DNAQ; EC=2.7.7.7;[Mycobacterium bovis] Length = 329 Score = 421 bits (1082), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|C1AIG5|C1AIG5_MYCBT Tax_Id=561275 (dnaQ)SubName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7;[Mycobacterium bovis] Length = 329 Score = 421 bits (1082), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|A1KQ43|A1KQ43_MYCBP Tax_Id=410289 (dnaQ)SubName: Full=Putative dna polymerase III (Epsilon subunit) dnaQ; EC=2.7.7.7;[Mycobacterium bovis] Length = 329 Score = 421 bits (1082), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D6FAR5|D6FAR5_MYCTU Tax_Id=611303 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis CPHL_A] Length = 329 Score = 421 bits (1082), Expect = e-116 Identities = 206/325 (63%), Positives = 240/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D6FTX6|D6FTX6_MYCTU Tax_Id=611304 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis K85] Length = 329 Score = 420 bits (1080), Expect = e-115 Identities = 206/325 (63%), Positives = 239/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETLGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D5YXY4|D5YXY4_MYCTU Tax_Id=515616 SubName: Full=DNA polymerase III subunit epsilon;[Mycobacterium tuberculosis 02_1987] Length = 329 Score = 419 bits (1078), Expect = e-115 Identities = 205/325 (63%), Positives = 239/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D5Y9W3|D5Y9W3_MYCTU Tax_Id=520141 SubName: Full=DNA polymerase III subunit epsilon;[Mycobacterium tuberculosis T85] Length = 329 Score = 419 bits (1078), Expect = e-115 Identities = 205/325 (63%), Positives = 239/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|C6DNF1|C6DNF1_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis] Length = 329 Score = 419 bits (1077), Expect = e-115 Identities = 205/325 (63%), Positives = 239/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHW V Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWRVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D6G5I7|D6G5I7_MYCTU Tax_Id=478435 SubName: Full=DNA polymerase III epsilon subunit dnaQ;[Mycobacterium tuberculosis KZN 605] Length = 329 Score = 419 bits (1077), Expect = e-115 Identities = 205/325 (63%), Positives = 239/325 (73%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+GQP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDGQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHW V Q +PHDA DD VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWRVPQQRPHDAFDDVRVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVDTTADGDQYALF 337 VVGGA VE F D Q ALF Sbjct: 305 GAVVGGASVEDFTDVAPVEKQLALF 329 >tr|D6EZ64|D6EZ64_MYCTU Tax_Id=611302 SubName: Full=DNA polymerase III epsilon subunit dnaQ; Flags: Fragment;[Mycobacterium tuberculosis T46] Length = 319 Score = 418 bits (1075), Expect = e-115 Identities = 202/314 (64%), Positives = 237/314 (75%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN+ APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNETAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVD 326 VVGGA VE F D Sbjct: 305 GAVVGGASVEDFTD 318 >tr|D5YLG1|D5YLG1_MYCTU Tax_Id=520140 SubName: Full=DNA polymerase III subunit epsilon; Flags: Fragment;[Mycobacterium tuberculosis EAS054] Length = 330 Score = 417 bits (1071), Expect = e-114 Identities = 202/314 (64%), Positives = 236/314 (75%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN APE GKGY A +LGVP++ + FM + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNATAPEHGKGYHALQLGVPVMPEARFMECI 304 Query: 313 DHVVGGADVETFVD 326 VVGGA VE F D Sbjct: 305 GAVVGGASVEDFTD 318 >tr|D5ZMQ7|D5ZMQ7_MYCTU Tax_Id=537210 SubName: Full=DNA polymerase III epsilon subunit dnaQ; Flags: Fragment;[Mycobacterium tuberculosis T17] Length = 284 Score = 377 bits (969), Expect = e-103 Identities = 181/279 (64%), Positives = 212/279 (75%) Query: 13 WGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPT 72 WGRPA GWAV+DVET+GFRPGQARI+S+A L + G +E S+ SLLNP VDPGPT Sbjct: 5 WGRPASHQDRGWAVIDVETSGFRPGQARIISLAVLGLDAAGRLEQSVVSLLNPKVDPGPT 64 Query: 73 HVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTA 132 HVHGLTA ML+ QP FAD+ E+++VLRGRTLVAHN FDY+F P+D Sbjct: 65 HVHGLTAAMLDDQPQFADIAGEVVDVLRGRTLVAHNVAFDYAFLAAEAEIAEAELPVDFV 124 Query: 133 MCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVW 192 MCTVELARRL+LG +NLRLETLAAHWGV Q +PHDA DDA VL IL L AR+ VW Sbjct: 125 MCTVELARRLQLGVDNLRLETLAAHWGVPQQRPHDAFDDARVLTGILAAALESARELDVW 184 Query: 193 LPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVV 252 LP+ +TR+RWPNG VTHDELRPLK A+R+ C Y NPG +V GRPLVQGMRV L+AEV Sbjct: 185 LPVHPVTRRRWPNGRVTHDELRPLKALAARMACPYLNPGRYVQGRPLVQGMRVGLAAEVK 244 Query: 253 RTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGK 291 RTHEEL+ER+LHAGLAYSD+VD TSLV+CN+ AP + Sbjct: 245 RTHEELVERILHAGLAYSDVVDRDTSLVVCNETAPNTAR 283 >tr|D1AAU1|D1AAU1_THECD Tax_Id=471852 SubName: Full=DNA polymerase III, epsilon subunit;[Thermomonospora curvata] Length = 328 Score = 224 bits (572), Expect = 1e-56 Identities = 124/300 (41%), Positives = 173/300 (57%), Gaps = 5/300 (1%) Query: 24 WAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLE 83 W VVDVET+G RP + R++S+A L + DG + S+LL+PG DPGP H+HGLT E L Sbjct: 16 WTVVDVETSGLRPDRHRVLSLAVLTLRPDGHLVEEFSTLLDPGCDPGPVHIHGLTPERLR 75 Query: 84 GQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLE 143 G P F V + + E+L GR +VAHNA FDY+F P++ +CT+ L RR+ Sbjct: 76 GAPTFDRVAERVAELLSGRVMVAHNAAFDYAFLAHEFGRAGLHLPVEQRLCTLALGRRIG 135 Query: 144 LGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLT-RKR 202 L T +LRL TLAAH+GV Q + HDALDDA VLA +L+ +LA A V LPL + + Sbjct: 136 LPTPDLRLSTLAAHYGVPQHRAHDALDDARVLAGVLRASLADAAALGVPLPLERCSFHSV 195 Query: 203 WPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLERV 262 NG + P++ + PC + PG AG PLVQGM+V + E + +EL +R Sbjct: 196 LRNGAARNGYPPPIR----KTPCAFRCPGRMRAGGPLVQGMKVVFTGETLTPRQELADRA 251 Query: 263 LHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGGADVE 322 AGL V TS+++ D K +A+ GVP++ + F+RLL V G ++ Sbjct: 252 AGAGLNVMSTVSRFTSVLVAADVHAASAKARRARAEGVPIIDEPTFLRLLQDVRPGVRLD 311 >tr|Q0SFP4|Q0SFP4_RHOSR Tax_Id=101510 SubName: Full=Probable DNA polymerase III;[Rhodococcus sp.] Length = 649 Score = 221 bits (563), Expect = 1e-55 Identities = 130/318 (40%), Positives = 175/318 (55%), Gaps = 12/318 (3%) Query: 2 SRAPLSSTPQLWGRPADEP-GSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS 60 SR+ LSS RP P G W VVDVET+G R R++SVAALA+ +DGSVE + Sbjct: 48 SRSVLSSASSTMTRPVRLPTGHRWVVVDVETSGLRSSTHRVLSVAALALREDGSVERELV 107 Query: 61 SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXX 120 +LLNPG DPGP H+H LT + L G P F +V ++L+E+L GRTLVAHNA FDY F Sbjct: 108 TLLNPGCDPGPVHIHNLTPQRLAGAPRFEEVANDLLELLDGRTLVAHNASFDYGFLDAEV 167 Query: 121 XXXXXXXPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK 180 P +CT+ L+RRLE+ N +L TLAAHW V Q + HDA DDALVL ++ Sbjct: 168 RRAGMTMPTRQRLCTLALSRRLEIDVPNHKLSTLAAHWKVRQNRAHDAYDDALVLTEVFA 227 Query: 181 PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV 240 + + A ++ LP+ +R + P +V P R NPG G LV Sbjct: 228 HSASLAESLRLPLPVVGCADRR---------AVYPDRVPRVESPWR--NPGRLDPGVGLV 276 Query: 241 QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV 300 QGM++ +S L R+ AGL + V QT +V+CNDP K +A G+ Sbjct: 277 QGMKLVISGSTDVPRLSLAARLTAAGLDVMNSVSRQTGVVVCNDPHSSSAKVRRAVADGI 336 Query: 301 PLVRDDEFMRLLDHVVGG 318 P++ + + +L HV G Sbjct: 337 PVLTERQLGEMLLHVTPG 354 >tr|A8LH88|A8LH88_FRASN Tax_Id=298653 SubName: Full=Exonuclease RNase T and DNA polymerase III;[Frankia sp.] Length = 389 Score = 219 bits (559), Expect = 3e-55 Identities = 131/299 (43%), Positives = 171/299 (57%), Gaps = 12/299 (4%) Query: 24 WAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLE 83 +AVVDVETTG P + R++SVA + DG+VEH S+LL+PG DPGP H+HGLT + L Sbjct: 77 YAVVDVETTGLSPTRDRVLSVAVVLTAADGTVEHRWSTLLDPGCDPGPVHIHGLTRQRLA 136 Query: 84 GQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLE 143 G P FA V DE+ +L GR LVAHNA FD+ P++ +CT+ LA RL Sbjct: 137 GSPTFAAVADEVAGLLAGRVLVAHNAAFDWRMLAGEAMRIGTTIPVEWRLCTLTLASRLG 196 Query: 144 LGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKRW 203 L +LRL +LAA+WGV Q + HDA DDA VLA +L L RA D+ + LPL + Sbjct: 197 LELPSLRLASLAAYWGVVQRRAHDAQDDAEVLAALLPRILQRAADQYLELPLTRC----- 251 Query: 204 PNGHVTHD--ELRPLKVEAS--RLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELL 259 V HD +RP + A+ PCRY NPG G LVQGMRVA S EL+ Sbjct: 252 ---GVDHDGVTVRPPRFAAAGRTPPCRYRNPGRLDPGAALVQGMRVAFSGPTRTERGELV 308 Query: 260 ERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGG 318 R + AGL ++ V +TSL++ ND K A L P+ +++F+ LL V G Sbjct: 309 GRAVAAGLHVTETVSRRTSLLVTNDARGVTRKVRTAALLNTPVRGEEDFLELLAAVRPG 367 >tr|D6A900|D6A900_9ACTO Tax_Id=566461 SubName: Full=Putative uncharacterized protein;[Streptomyces ghanaensis ATCC 14672] Length = 631 Score = 218 bits (555), Expect = 9e-55 Identities = 121/300 (40%), Positives = 169/300 (56%), Gaps = 10/300 (3%) Query: 24 WAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLE 83 WA+VDVET+G + R++SVA + +G DG S+LLNPG DPGP VHGLT E L+ Sbjct: 20 WALVDVETSGLMARRDRVLSVAVITIGPDGEQTGEFSTLLNPGCDPGPVEVHGLTVERLQ 79 Query: 84 GQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLE 143 G P F V + +L+GR LVAHNA FDY F P+ +CT+ L R+++ Sbjct: 80 GAPTFDQVAGRIGAMLQGRVLVAHNAQFDYDFLAHEFARARMWLPVSQRLCTLALNRQVD 139 Query: 144 LGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKRW 203 T++++L TLAAH+GV++ + HDALDD VLA IL+ +L A + LPL + Sbjct: 140 PPTDDMKLGTLAAHYGVSRQRAHDALDDTRVLAGILRASLREAARLDLPLPLVTCPPR-- 197 Query: 204 PNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLERVL 263 + P + ++ PC Y NPG G PL QGM+VA++ E EL+ R + Sbjct: 198 -----AESQFTP---KPAKTPCAYRNPGRLTPGGPLQQGMKVAITGETAHARAELVGRAV 249 Query: 264 HAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGGADVET 323 AGL V TS+++ N+PA + K +A GVP+V + F+RLL V G ET Sbjct: 250 AAGLNMMTSVSRHTSVLVTNEPAADSAKARRALAEGVPVVDERTFLRLLADVRPGTAHET 309 >tr|D3DAS5|D3DAS5_9ACTO Tax_Id=102897 SubName: Full=Exonuclease RNase T and DNA polymerase III;[Frankia sp. EUN1f] Length = 296 Score = 216 bits (551), Expect = 3e-54 Identities = 127/296 (42%), Positives = 167/296 (56%), Gaps = 6/296 (2%) Query: 29 VETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLEGQPCF 88 +ETTG P + R++SVA + DG+V+ S+LL+PG DPGP H+HGLT E L G P F Sbjct: 1 METTGLWPARDRVLSVAVVLTAPDGAVQGRWSTLLDPGCDPGPVHIHGLTRERLAGSPTF 60 Query: 89 ADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLELGTEN 148 A VVDEL E+L GR LVAHNA FD+ P++ +CT+ LA RL L + Sbjct: 61 AAVVDELSELLAGRVLVAHNAAFDWRMLAGEALRIGRTLPVEWRLCTLTLASRLGLELAS 120 Query: 149 LRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKRWPNGHV 208 LRL LA HWGVTQ + HDA DDA VLA +L L+RA ++ + LPL + +R +G Sbjct: 121 LRLAALAEHWGVTQRRAHDAEDDAEVLAALLPRILSRAAEQFLELPLTRCGVER--DGVA 178 Query: 209 THDELRPLKVEASR-LPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLERVLHAGL 267 + P A R PC Y NPGP G PLVQGMRV + L++R AGL Sbjct: 179 VYP---PRYSAAGRPPPCGYRNPGPLAPGAPLVQGMRVVFTGPTRTERGALVDRAAAAGL 235 Query: 268 AYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGGADVET 323 + V +TSL++ N+ K A +LG+P + EF+ LL+ V G T Sbjct: 236 EVTASVSRRTSLLVTNEKHGATRKARAAAQLGIPTRDEGEFLALLEAVAPGVPEAT 291 >tr|C9ZG17|C9ZG17_STRSW Tax_Id=680198 SubName: Full=Putative DNA polymerase III, epsilon chain (EC 2.7.7.7);[Streptomyces scabies] Length = 613 Score = 210 bits (535), Expect = 2e-52 Identities = 119/289 (41%), Positives = 164/289 (56%), Gaps = 12/289 (4%) Query: 24 WAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLE 83 WA+VDVET+G RPG+ R++S++ L + G+ S+LLNP DPGP HVHGLTA+ L Sbjct: 19 WALVDVETSGLRPGRDRVLSLSILTLDAQGNQTGEFSTLLNPDCDPGPVHVHGLTADRLA 78 Query: 84 GQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLE 143 G P F ++ ++ +L R LVAHNA FDY F P+ +CT+ L R + Sbjct: 79 GAPAFEEIAPQVGALLSSRVLVAHNAQFDYDFLAHEFAQVRSWAPVSRRLCTLALNRLVG 138 Query: 144 LGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKRW 203 T +L+L TLAAH+GV Q K HDA DD VL+ IL+ +L+ A + LP+ Sbjct: 139 PATPDLKLGTLAAHYGVRQEKAHDAQDDVRVLSGILRGSLSAAEQLGLALPVL------- 191 Query: 204 PNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLERVL 263 G + RP + PC Y NPG G PLVQGM+VA++ + + EEL+ R + Sbjct: 192 --GCPPRQDYRPY---VPKTPCAYRNPGRMAPGGPLVQGMKVAITGDTRVSREELVARSV 246 Query: 264 HAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLL 312 AGL V QTS+V+ N P K +A + GVPLV + ++RLL Sbjct: 247 AAGLNMMTSVSGQTSVVVTNAPGTGSAKLKRAADEGVPLVDEPTYLRLL 295 >tr|D1BFD5|D1BFD5_SANKS Tax_Id=446469 SubName: Full=DNA polymerase III epsilon subunit-like 3'-5' exonuclease;[Sanguibacter keddieii] Length = 611 Score = 207 bits (528), Expect = 1e-51 Identities = 120/300 (40%), Positives = 169/300 (56%), Gaps = 6/300 (2%) Query: 23 GWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEML 82 G+AVVDVET+G P R++ VA V DG++ S SSLL+PGVDPGP HVHGLT E L Sbjct: 21 GYAVVDVETSGLSPTHHRVLQVAVTQVEPDGALGRSWSSLLDPGVDPGPVHVHGLTRERL 80 Query: 83 EGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRL 142 G P + DV L E++R R LVAHNA FD+ F +D +CT+ L+RRL Sbjct: 81 AGAPQYQDVAGTLDELVRDRVLVAHNARFDWGFLAAESDRARAPLSVDRRLCTLALSRRL 140 Query: 143 ELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKR 202 +L +LRL T+AAHWGV Q + HDA DD VL ++L+ +LA A + LP+ Sbjct: 141 DLPVSDLRLATVAAHWGVQQRRAHDAEDDVRVLVEVLRHSLAAADRLGMTLPVAAC---- 196 Query: 203 WPNGHVTHDELRPLKVEAS-RLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLER 261 G + + P++ S R+PC +A PG + P VQGM++ + R ++L+ Sbjct: 197 -GPGEPSARDGGPVRPSPSPRVPCDWAWPGRWDGASPWVQGMKIVFTGPTERPRDDLVRL 255 Query: 262 VLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGGADV 321 + AGL + +TS+V+C PA K A+ G+ +V + F+ L+ VV G V Sbjct: 256 AVGAGLDVMNSASSRTSVVVCATPAATTRKLAAARAHGIEIVDERVFLDLVGRVVPGRPV 315 >tr|C9NHS4|C9NHS4_9ACTO Tax_Id=591167 SubName: Full=DNA polymerase III, epsilon subunit;[Streptomyces flavogriseus ATCC 33331] Length = 346 Score = 207 bits (526), Expect = 2e-51 Identities = 132/316 (41%), Positives = 170/316 (53%), Gaps = 14/316 (4%) Query: 16 PADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVH 75 PA P G+AVVDVETTG RI+S A + G VE +L+NP DPGP +H Sbjct: 25 PAAYP-QGYAVVDVETTGLARDD-RIISAAVYRLDARGDVEDHWYTLVNPERDPGPVWIH 82 Query: 76 GLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCT 135 GLT+++LEG P F V EL E L GR LVAHNA FD+S P++ +CT Sbjct: 83 GLTSDVLEGAPLFPQVAAELSERLAGRVLVAHNAAFDWSMIAREYARAAVTAPVEQRLCT 142 Query: 136 VELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPL 195 + LA+ L L N +LE+LAAH+GV Q H ALDDA VLA+ +P+L A V LPL Sbjct: 143 IALAKELRLPLPNHKLESLAAHFGVVQQHAHHALDDARVLAEAFRPSLHAAAKGGVRLPL 202 Query: 196 ---RQLTRKRWPNGHVT-HDELRPLKVEASRLP------CRYANPGPFVAGRPLVQGMRV 245 R LT W + VT RP + + S P C Y NPG + + +PL+QGMRV Sbjct: 203 LECRPLT--EWYDSPVTPRAGYRPSQGQGSWRPSRKRPACPYPNPGRYESDKPLMQGMRV 260 Query: 246 ALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRD 305 A S + E L +R + AGL + V TSL++ NDP K +AK G P++ + Sbjct: 261 AFSGDTSIDRELLEDRAVEAGLHVATSVSRLTSLLVTNDPDSATSKTVKAKSFGTPVLEE 320 Query: 306 DEFMRLLDHVVGGADV 321 F LL V V Sbjct: 321 SAFTHLLRDVAPAVSV 336 >tr|D6K0X7|D6K0X7_9ACTO Tax_Id=645465 SubName: Full=DNA polymerase III, epsilon subunit;[Streptomyces sp. e14] Length = 653 Score = 206 bits (523), Expect = 5e-51 Identities = 118/299 (39%), Positives = 161/299 (53%), Gaps = 10/299 (3%) Query: 24 WAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEMLE 83 WA+VDVET+G + RI+S+A L G DG+ S+L+NPG DPGP H+HGLTAE L Sbjct: 19 WALVDVETSGLIARRDRILSIAVLTFGPDGTQTGEYSTLVNPGCDPGPVHIHGLTAERLR 78 Query: 84 GQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRLE 143 P F V + +L+ R +VAHNA FDY F P++ +CT+ L RR+E Sbjct: 79 DAPAFEQVAGRIGALLQDRVMVAHNAQFDYDFLAHEFARARLCLPVNQRLCTLALNRRVE 138 Query: 144 LGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTRKRW 203 +L L +LAAH+GV Q + HDALDD VLA I + +L+ A V LPL ++ Sbjct: 139 PPAADLSLASLAAHYGVPQTRAHDALDDTRVLAGIFRSSLSEAARLDVPLPLVPCPPRQD 198 Query: 204 PNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLERVL 263 P + + PC Y NPG G PLVQGM++A++ E + EL+ R + Sbjct: 199 PR----------FAPKPPKSPCAYRNPGRPAPGGPLVQGMKIAVTGETATSRAELVARAV 248 Query: 264 HAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGGADVE 322 AGL V TS ++ ND A K +A GVP++ + F+ LL V G E Sbjct: 249 AAGLNIMSSVSRHTSALVTNDAASGSAKARRAIAEGVPILDERTFLGLLSEVRPGTPHE 307 >tr|B5GGH4|B5GGH4_9ACTO Tax_Id=465543 SubName: Full=DNA polymerase III epsilon subunit;[Streptomyces sp. SPB74] Length = 331 Score = 204 bits (519), Expect = 1e-50 Identities = 126/313 (40%), Positives = 165/313 (52%), Gaps = 15/313 (4%) Query: 23 GWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEML 82 G+AVVDVETTG RIVS A V G VE +L+NP DPGP +HGLT+E+L Sbjct: 18 GYAVVDVETTGLARDD-RIVSAAVYRVDARGEVEDHWYTLVNPERDPGPVWIHGLTSEVL 76 Query: 83 EGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARRL 142 EG P F ++ EL L GR LVAHNA FD+S P+ +CT+ LA+ L Sbjct: 77 EGAPLFPEIAGELSRRLDGRVLVAHNAVFDWSMLAREYARAGITAPVRRRLCTIALAKEL 136 Query: 143 ELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPL------- 195 L N +LETLAAH+GV Q + H ALDDA VLA+ +P+L A V LPL Sbjct: 137 ALPLPNHKLETLAAHFGVEQRRAHHALDDARVLAEAFRPSLRAAALGNVRLPLLECRPLT 196 Query: 196 -------RQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALS 248 R + +++ + + + R PC Y NPG + GRPLVQGMRVA S Sbjct: 197 EWSDSPARPVIGRQYGGQYGSRPAAGNWRPSRKRPPCPYPNPGRWEDGRPLVQGMRVAFS 256 Query: 249 AEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEF 308 + E L +R AGL + + TSL++ NDP K +A++ G P+V + F Sbjct: 257 GDTSTERELLEDRATEAGLHVAGSISRLTSLLVTNDPDSGTSKTVRARQYGTPVVDEAAF 316 Query: 309 MRLLDHVVGGADV 321 +LL V V Sbjct: 317 GQLLRDVAPAGSV 329 >tr|D6AU76|D6AU76_STRFL Tax_Id=457431 SubName: Full=Putative uncharacterized protein;[Streptomyces roseosporus NRRL 15998] Length = 641 Score = 202 bits (515), Expect = 4e-50 Identities = 115/298 (38%), Positives = 162/298 (54%), Gaps = 10/298 (3%) Query: 21 GSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAE 80 G WA+VDVET+G + R++SVA + +G DG S+LL+PG DPGP VHGLTAE Sbjct: 17 GYDWALVDVETSGLVARRDRVLSVAVITIGPDGEQTGEFSTLLDPGCDPGPVEVHGLTAE 76 Query: 81 MLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELAR 140 L G P F V + +L+ R LVAHNA FDY F P+ +CT+ L R Sbjct: 77 RLRGAPTFDQVAGRIGAMLQDRVLVAHNAQFDYDFLAHEFARARMWLPVSQRLCTLALNR 136 Query: 141 RLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQLTR 200 +++ T++++L TLA H+ V Q + HDALDD VLA IL+ +L A + LPL Sbjct: 137 QVDPPTDDMKLGTLATHYDVPQQRAHDALDDTRVLAGILRASLREAARLDLPLPLVTCPP 196 Query: 201 KRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELLE 260 + + P + + PC Y NPG + PL QGM+VA++ E EL+ Sbjct: 197 R-------AESQFTP---KPPKTPCAYRNPGRLASDGPLRQGMKVAITGETAHARAELVG 246 Query: 261 RVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGG 318 R + AGL V TS+++ N+PA K +A GVP++ + F+R+L V G Sbjct: 247 RAVAAGLNMMTSVSRHTSVLVTNEPASGSAKVRRALTEGVPVIDEHTFLRMLADVRPG 304 >tr|D0L8D9|D0L8D9_GORB4 Tax_Id=526226 SubName: Full=Exonuclease RNase T and DNA polymerase III;[Gordonia bronchialis] Length = 590 Score = 202 bits (514), Expect = 5e-50 Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 15/299 (5%) Query: 22 SGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPGVDPGPTHVHGLTAEM 81 SGW +VDVETTG + R++S+A + + DG VE ++LLNPG DPGP H+H LT + Sbjct: 8 SGWVLVDVETTGTNARRDRVLSLATMTLDYDGRVEDEYATLLNPGCDPGPVHIHNLTRDR 67 Query: 82 LEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXXXPIDTAMCTVELARR 141 L G P F + L ++L GRT+VAHNA FD+ F PID +CTV LARR Sbjct: 68 LHGAPTFDVTMSPLQQMLAGRTMVAHNATFDHGFLVEEARRLGATLPIDHRLCTVTLARR 127 Query: 142 LELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARARDRKVWLPLRQ--LT 199 L+L N++L TLA +WG+ Q HDA DD LA++ + +L A + LP+ + Sbjct: 128 LQLDVPNVKLGTLATYWGIRQRAAHDARDDVRTLAEVFRRSLDLAETLGLRLPVVACGVN 187 Query: 200 RKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLVQGMRVALSAEVVRTHEELL 259 + +P+ + +R+PC + +PG F L+QG +VA++ EL Sbjct: 188 SRAFPD-------------KVTRVPCPWRDPGRFDPAVGLIQGTKVAITGPTTVPRTELA 234 Query: 260 ERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGVPLVRDDEFMRLLDHVVGG 318 R+ AGL + V +T +VI N +P+ K +A+ G P++ + +RL DH++ G Sbjct: 235 RRLSDAGLDVMNSVSGKTGIVIANPGSPDSRKLQRARLDGTPVLDEGTMLRLADHILPG 293 >tr|D5ZPY6|D5ZPY6_9ACTO Tax_Id=566461 SubName: Full=DNA polymerase III subunit epsilon;[Streptomyces ghanaensis ATCC 14672] Length = 327 Score = 201 bits (512), Expect = 9e-50 Identities = 130/324 (40%), Positives = 171/324 (52%), Gaps = 16/324 (4%) Query: 7 SSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMSSLLNPG 66 +S+P +W PA P G+AVVDVETTG RIVS A + G VE +++NP Sbjct: 9 ASSPTVW--PAAYP-QGYAVVDVETTGLARDD-RIVSAAVYRLDARGEVEDHWYTVVNPE 64 Query: 67 VDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFXXXXXXXXXXX 126 DPGP +HGLT+E LEG P F DV +E L GR LVAHNA FD+ Sbjct: 65 RDPGPVWIHGLTSEALEGAPLFRDVAEEFATRLEGRVLVAHNAVFDWQMIAREYARARSE 124 Query: 127 XPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILKPTLARA 186 P+ +CT+ L++ L L N +LE+LAAH+GV Q + H ALDDA VLA+ +P+L A Sbjct: 125 APVKQRLCTIALSKELGLPLPNHKLESLAAHFGVVQRRAHHALDDARVLAEAFRPSLRAA 184 Query: 187 RDRKVWLPL---RQLTRKRWPNGHVTHDELRP-------LKVEASRLPCRYANPGPFVAG 236 V LPL R LT W + T + P + R C Y NPG + G Sbjct: 185 AASGVRLPLHECRPLT--EWTDRPRTGQQAAPGGYRPTGWRPSRRRPACPYPNPGRYAPG 242 Query: 237 RPLVQGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAK 296 L QGMRVA S + E L +R AGL + + TSL++ NDP K +A+ Sbjct: 243 GRLKQGMRVAFSGDTSVERELLEDRATEAGLHVATSLSRLTSLLVTNDPDSGTSKAVKAR 302 Query: 297 ELGVPLVRDDEFMRLLDHVVGGAD 320 + G P+V + F +LL+ V AD Sbjct: 303 QYGTPVVDEAAFGQLLEDVEPAAD 326 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.319 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 2,807,030,720 Number of extensions: 115049311 Number of successful extensions: 270824 Number of sequences better than 10.0: 4119 Number of HSP's gapped: 269387 Number of HSP's successfully gapped: 4147 Length of query: 337 Length of database: 4,236,830,644 Length adjustment: 138 Effective length of query: 199 Effective length of database: 2,510,745,412 Effective search space: 499638336988 Effective search space used: 499638336988 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 81 (35.8 bits)