BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MSMEG_6369
         (276 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           12,507,864 sequences; 4,236,830,644 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|A0R5Z3|A0R5Z3_MYCS2 Tax_Id=246196 SubName: Full=O-antigen exp...   522   e-146
tr|Q1B1Y7|Q1B1Y7_MYCSS Tax_Id=164756 SubName: Full=ABC-2 type tr...   476   e-132
tr|A3Q7L0|A3Q7L0_MYCSJ Tax_Id=164757 SubName: Full=ABC-2 type tr...   476   e-132
tr|A1UN62|A1UN62_MYCSK Tax_Id=189918 SubName: Full=ABC-2 type tr...   476   e-132
tr|A1TGT5|A1TGT5_MYCVP Tax_Id=350058 SubName: Full=ABC-2 type tr...   468   e-130
tr|A4T6C2|A4T6C2_MYCGI Tax_Id=350054 SubName: Full=ABC-2 type tr...   451   e-125
tr|Q745N4|Q745N4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   450   e-125
tr|A0Q9E1|A0Q9E1_MYCA1 Tax_Id=243243 SubName: Full=O-antigen exp...   450   e-125
tr|A0PKI8|A0PKI8_MYCUA Tax_Id=362242 (rfbD)SubName: Full=O-antig...   447   e-124
tr|B2HLL0|B2HLL0_MYCMM Tax_Id=216594 (rfbD)SubName: Full=O-antig...   447   e-124
tr|D5P994|D5P994_9MYCO Tax_Id=525368 (rfbD)SubName: Full=O-antig...   446   e-123
tr|Q7TVN9|Q7TVN9_MYCBO Tax_Id=1765 (rfbD)SubName: Full=PROBABLE ...   443   e-122
tr|P72049|P72049_MYCTU Tax_Id=1773 (rfbD)SubName: Full=O-antigen...   443   e-122
tr|C6DNM6|C6DNM6_MYCTK Tax_Id=478434 SubName: Full=O-antigen/lip...   443   e-122
tr|C1AIN8|C1AIN8_MYCBT Tax_Id=561275 (rfbD)SubName: Full=Putativ...   443   e-122
tr|A5WU03|A5WU03_MYCTF Tax_Id=336982 SubName: Full=O-antigen/lip...   443   e-122
tr|A5U9B2|A5U9B2_MYCTA Tax_Id=419947 (rfbD)SubName: Full=O-antig...   443   e-122
tr|A1KQB7|A1KQB7_MYCBP Tax_Id=410289 (rfbD)SubName: Full=Probabl...   443   e-122
tr|D6G5R1|D6G5R1_MYCTU Tax_Id=478435 SubName: Full=O-antigen/lip...   443   e-122
tr|D6FUI4|D6FUI4_MYCTU Tax_Id=611304 SubName: Full=O-antigen/lip...   443   e-122
tr|D6FBC5|D6FBC5_MYCTU Tax_Id=611303 SubName: Full=O-antigen/lip...   443   e-122
tr|D6EZD8|D6EZD8_MYCTU Tax_Id=611302 SubName: Full=O-antigen/lip...   443   e-122
tr|D5ZMY4|D5ZMY4_MYCTU Tax_Id=537210 SubName: Full=O-antigen/lip...   443   e-122
tr|D5Z905|D5Z905_MYCTU Tax_Id=537209 SubName: Full=O-antigen/lip...   443   e-122
tr|D5YLN7|D5YLN7_MYCTU Tax_Id=520140 SubName: Full=O-antigen/lip...   443   e-122
tr|D5YA41|D5YA41_MYCTU Tax_Id=520141 SubName: Full=O-antigen/lip...   443   e-122
tr|D5XNU0|D5XNU0_MYCTU Tax_Id=515617 SubName: Full=O-antigen/lip...   443   e-122
tr|A4KMQ2|A4KMQ2_MYCTU Tax_Id=395095 SubName: Full=O-antigen/lip...   443   e-122
tr|A2VMG4|A2VMG4_MYCTU Tax_Id=348776 SubName: Full=O-antigen/lip...   443   e-122
tr|Q9CDA2|Q9CDA2_MYCLE Tax_Id=1769 SubName: Full=Putative ABC tr...   439   e-121
tr|B8ZTW7|B8ZTW7_MYCLB Tax_Id=561304 SubName: Full=Putative ABC ...   439   e-121
tr|C3JQ90|C3JQ90_RHOER Tax_Id=596309 SubName: Full=O-antigen exp...   378   e-103
tr|B1MEN7|B1MEN7_MYCA9 Tax_Id=561007 SubName: Full=Probable O-an...   372   e-101
tr|Q0S974|Q0S974_RHOSR Tax_Id=101510 SubName: Full=ABC O-antigen...   337   9e-91
tr|C1B972|C1B972_RHOOB Tax_Id=632772 SubName: Full=Putative ABC ...   337   9e-91
tr|C0ZLZ1|C0ZLZ1_RHOE4 Tax_Id=234621 SubName: Full=Putative ABC ...   333   2e-89
tr|D5PKX3|D5PKX3_COREQ Tax_Id=525370 (rfbD2)SubName: Full=O-anti...   333   2e-89
tr|Q5Z3D0|Q5Z3D0_NOCFA Tax_Id=37329 SubName: Full=Putative ABC t...   328   6e-88
tr|D0LC98|D0LC98_GORB4 Tax_Id=526226 SubName: Full=ABC-2 type tr...   322   3e-86
tr|A4QAJ7|A4QAJ7_CORGB Tax_Id=340322 SubName: Full=Putative unch...   319   2e-85
tr|Q6M8F3|Q6M8F3_CORGL Tax_Id=1718 SubName: Full=Polysaccharide/...   319   3e-85
tr|Q8NTV1|Q8NTV1_CORGL Tax_Id=1718 SubName: Full=ABC-type transp...   315   3e-84
tr|Q8FU43|Q8FU43_COREF Tax_Id=152794 SubName: Full=Putative O-an...   315   4e-84
tr|C8NRC6|C8NRC6_COREF Tax_Id=196164 (rfbD)SubName: Full=O-antig...   315   4e-84
tr|Q6NK62|Q6NK62_CORDI Tax_Id=1717 SubName: Full=Putative ABC tr...   312   2e-83

>tr|A0R5Z3|A0R5Z3_MYCS2 Tax_Id=246196 SubName: Full=O-antigen export
           system, permease protein;[Mycobacterium smegmatis]
          Length = 276

 Score =  522 bits (1345), Expect = e-146
 Identities = 259/276 (93%), Positives = 259/276 (93%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA
Sbjct: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH
Sbjct: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT
Sbjct: 121 VYRLVWRQIILFAHNIIIFVIIAIIYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV
Sbjct: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276


>tr|Q1B1Y7|Q1B1Y7_MYCSS Tax_Id=164756 SubName: Full=ABC-2 type
           transporter;[Mycobacterium sp.]
          Length = 276

 Score =  476 bits (1226), Expect = e-132
 Identities = 231/276 (83%), Positives = 244/276 (88%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           M+F +A+AQSKTMARA RDL EGF KRELW HLGWQDIKQRYRRSVLGPFWITIATGATA
Sbjct: 1   MSFDEASAQSKTMARAWRDLREGFGKRELWLHLGWQDIKQRYRRSVLGPFWITIATGATA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG+LYSKLFKLELSEHLPYVT+GLI+WNLINASILEGAEVFIANEGLIKQLPTPLSVH
Sbjct: 61  VAMGLLYSKLFKLELSEHLPYVTMGLIVWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW WTDLAV PAL LIMLN VWV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIIIFVVIAIIYPKPWHWTDLAVFPALALIMLNCVWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL S+VQLLFFMTPIIWNE+TLQ QGAG WAKIVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLNSIVQLLFFMTPIIWNEATLQAQGAGQWAKIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           DQE+RHW+VVL  TVIGWTFAAFAM+QYR RVPYWV
Sbjct: 241 DQEVRHWIVVLVLTVIGWTFAAFAMKQYRARVPYWV 276


>tr|A3Q7L0|A3Q7L0_MYCSJ Tax_Id=164757 SubName: Full=ABC-2 type
           transporter;[Mycobacterium sp.]
          Length = 276

 Score =  476 bits (1226), Expect = e-132
 Identities = 231/276 (83%), Positives = 244/276 (88%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           M+F +A+AQSKTMARA RDL EGF KRELW HLGWQDIKQRYRRSVLGPFWITIATGATA
Sbjct: 1   MSFDEASAQSKTMARAWRDLREGFGKRELWLHLGWQDIKQRYRRSVLGPFWITIATGATA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG+LYSKLFKLELSEHLPYVT+GLI+WNLINASILEGAEVFIANEGLIKQLPTPLSVH
Sbjct: 61  VAMGLLYSKLFKLELSEHLPYVTMGLIVWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW WTDLAV PAL LIMLN VWV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIIIFVVIAIIYPKPWHWTDLAVFPALALIMLNCVWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL S+VQLLFFMTPIIWNE+TLQ QGAG WAKIVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLNSIVQLLFFMTPIIWNEATLQAQGAGQWAKIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           DQE+RHW+VVL  TVIGWTFAAFAM+QYR RVPYWV
Sbjct: 241 DQEVRHWIVVLVLTVIGWTFAAFAMKQYRARVPYWV 276


>tr|A1UN62|A1UN62_MYCSK Tax_Id=189918 SubName: Full=ABC-2 type
           transporter;[Mycobacterium sp.]
          Length = 276

 Score =  476 bits (1226), Expect = e-132
 Identities = 231/276 (83%), Positives = 244/276 (88%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           M+F +A+AQSKTMARA RDL EGF KRELW HLGWQDIKQRYRRSVLGPFWITIATGATA
Sbjct: 1   MSFDEASAQSKTMARAWRDLREGFGKRELWLHLGWQDIKQRYRRSVLGPFWITIATGATA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG+LYSKLFKLELSEHLPYVT+GLI+WNLINASILEGAEVFIANEGLIKQLPTPLSVH
Sbjct: 61  VAMGLLYSKLFKLELSEHLPYVTMGLIVWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW WTDLAV PAL LIMLN VWV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIIIFVVIAIIYPKPWHWTDLAVFPALALIMLNCVWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL S+VQLLFFMTPIIWNE+TLQ QGAG WAKIVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLNSIVQLLFFMTPIIWNEATLQAQGAGQWAKIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           DQE+RHW+VVL  TVIGWTFAAFAM+QYR RVPYWV
Sbjct: 241 DQEVRHWIVVLVLTVIGWTFAAFAMKQYRARVPYWV 276


>tr|A1TGT5|A1TGT5_MYCVP Tax_Id=350058 SubName: Full=ABC-2 type
           transporter;[Mycobacterium vanbaalenii]
          Length = 276

 Score =  468 bits (1204), Expect = e-130
 Identities = 229/276 (82%), Positives = 236/276 (85%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MT  DAAAQS+T ARA  DLV GF KRELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTIMDAAAQSRTFARAWGDLVAGFGKRELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG LYS LFKLELSEHLPYVTLGLI+WNLINASILEGAEVFIANEGLIKQLPTPLSVH
Sbjct: 61  VAMGGLYSMLFKLELSEHLPYVTLGLIVWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW W DLAVIPALGLI  N VWVALCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIIIFVIIAIVYPKPWNWADLAVIPALGLIAANCVWVALCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL S+VQLLFFMTPIIWNESTLQ QGAG WAK+VE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLGSLVQLLFFMTPIIWNESTLQAQGAGGWAKVVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           DQELRHW+VVL  TV+GWTFAA AMRQYR RVPYWV
Sbjct: 241 DQELRHWVVVLVLTVVGWTFAALAMRQYRARVPYWV 276


>tr|A4T6C2|A4T6C2_MYCGI Tax_Id=350054 SubName: Full=ABC-2 type
           transporter;[Mycobacterium gilvum]
          Length = 276

 Score =  451 bits (1159), Expect = e-125
 Identities = 220/276 (79%), Positives = 233/276 (84%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MT  DAAA+S+T  RA  DLV GF KRELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTIMDAAARSRTFGRAWGDLVAGFGKRELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG LYS LFKLELSEHLPYVTLGLI+WNLINASILEGA+VF+ANEGLIKQLPTPLSVH
Sbjct: 61  VAMGGLYSMLFKLELSEHLPYVTLGLIVWNLINASILEGADVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW+W DL+VIPAL L+ LN VWVALCFGILAT
Sbjct: 121 VYRLVWRQMLLFAHNIIIFVIIAIIYPKPWSWADLSVIPALLLLALNCVWVALCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDI PLL S+VQLLFFMTPIIWNESTLQ QGAG WAKIVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDISPLLGSLVQLLFFMTPIIWNESTLQAQGAGGWAKIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           +QELRHW+VVL  TV+GW FAA AMRQYR RV YWV
Sbjct: 241 EQELRHWVVVLVLTVVGWGFAALAMRQYRARVAYWV 276


>tr|Q745N4|Q745N4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 276

 Score =  450 bits (1158), Expect = e-125
 Identities = 216/276 (78%), Positives = 234/276 (84%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T+ RAR DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTFLDAAAQSRTLRRARSDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG LYSKLF LELS HLPYVTLGLIIWNLINA+ILEGA+VF+ANEGLIKQLPTPLSVH
Sbjct: 61  VAMGGLYSKLFHLELSVHLPYVTLGLIIWNLINAAILEGADVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW+W DL+VIPAL LI+LN +WV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIVIYVVIAMIYPKPWSWADLSVIPALALIVLNCIWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL SVVQLLFFMTPIIWN+ TL+QQGAG W+ IVE+NPLLHYLDIVRAPLLG+
Sbjct: 181 RYRDIGPLLFSVVQLLFFMTPIIWNDDTLRQQGAGRWSSIVELNPLLHYLDIVRAPLLGS 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHW VVL  T +GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWAVVLVLTAVGWLLAAFAMRQYRARVPYWV 276


>tr|A0Q9E1|A0Q9E1_MYCA1 Tax_Id=243243 SubName: Full=O-antigen export
           system, permease protein;[Mycobacterium avium]
          Length = 276

 Score =  450 bits (1158), Expect = e-125
 Identities = 216/276 (78%), Positives = 234/276 (84%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T+ RAR DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTFLDAAAQSRTLRRARSDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG LYSKLF LELS HLPYVTLGLIIWNLINA+ILEGA+VF+ANEGLIKQLPTPLSVH
Sbjct: 61  VAMGGLYSKLFHLELSVHLPYVTLGLIIWNLINAAILEGADVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW+W DL+VIPAL LI+LN +WV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIVIYVVIAMIYPKPWSWADLSVIPALALIVLNCIWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL SVVQLLFFMTPIIWN+ TL+QQGAG W+ IVE+NPLLHYLDIVRAPLLG+
Sbjct: 181 RYRDIGPLLFSVVQLLFFMTPIIWNDDTLRQQGAGRWSSIVELNPLLHYLDIVRAPLLGS 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHW VVL  T +GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWAVVLVLTAVGWLLAAFAMRQYRARVPYWV 276


>tr|A0PKI8|A0PKI8_MYCUA Tax_Id=362242 (rfbD)SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter RfbD;[Mycobacterium
           ulcerans]
          Length = 318

 Score =  447 bits (1150), Expect = e-124
 Identities = 211/276 (76%), Positives = 236/276 (85%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T ARAR DL+EGF + ELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 43  MTFIDAAAQSRTFARARGDLLEGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 102

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           +AMG LYSKLF LELS HLPYVTLGLIIWNLINA+IL+GA+VF++NEGLIKQLP PLSVH
Sbjct: 103 LAMGGLYSKLFHLELSAHLPYVTLGLIIWNLINAAILDGADVFVSNEGLIKQLPAPLSVH 162

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           +YRLVWRQ                 +PKPW+W DL+V+PALGLI+LN VWV+LCFGI+AT
Sbjct: 163 IYRLVWRQMIFFAHNIVIYFVVAIIFPKPWSWADLSVVPALGLIVLNCVWVSLCFGIVAT 222

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDI PLL S+VQLLFFMTPIIWN+ TL +QGAG WA+IVE+NPLLHYLDIVRAPLLGA
Sbjct: 223 RYRDIAPLLNSLVQLLFFMTPIIWNDETLHRQGAGRWARIVELNPLLHYLDIVRAPLLGA 282

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHWLVV+A T++GW  AAFAMRQYR RVPYWV
Sbjct: 283 HQELRHWLVVIALTIVGWVLAAFAMRQYRARVPYWV 318


>tr|B2HLL0|B2HLL0_MYCMM Tax_Id=216594 (rfbD)SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter RfbD;[Mycobacterium
           marinum]
          Length = 276

 Score =  447 bits (1149), Expect = e-124
 Identities = 211/276 (76%), Positives = 236/276 (85%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T ARAR DL+EGF + ELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTFIDAAAQSRTFARARGDLLEGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           +AMG LYSKLF LELS HLPYVTLGLIIWNLINA+IL+GA+VF++NEGLIKQLP PLSVH
Sbjct: 61  LAMGGLYSKLFHLELSAHLPYVTLGLIIWNLINAAILDGADVFVSNEGLIKQLPAPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 +PKPW+W DL+V+PALGLI+LN VWV++CFGILAT
Sbjct: 121 VYRLVWRQVIFFAHNIVIYFVVAIIFPKPWSWADLSVVPALGLIVLNCVWVSICFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDI PLL S+VQLLFFMTPIIWN+ TL +QGAG W++IVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIAPLLNSLVQLLFFMTPIIWNDETLHRQGAGRWSRIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHWLVV+A T++GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWLVVIALTIVGWVLAAFAMRQYRARVPYWV 276


>tr|D5P994|D5P994_9MYCO Tax_Id=525368 (rfbD)SubName: Full=O-antigen
           export system;[Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 276

 Score =  446 bits (1148), Expect = e-123
 Identities = 215/276 (77%), Positives = 232/276 (84%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T  RAR DLV GF + ELW HLGWQDIKQRYRRSVLGPFWITIATG TA
Sbjct: 1   MTFLDAAAQSRTFTRARGDLVAGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTA 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           VAMG LYSKLF LELS HLPYVTLGLI+WNLINA+ILEGA+VF+ANEGLIKQLPTPLSVH
Sbjct: 61  VAMGGLYSKLFHLELSVHLPYVTLGLIVWNLINAAILEGADVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 YPKPW+W DL+VIPAL LI+LN +WV+LCFGILAT
Sbjct: 121 VYRLVWRQMILFAHNIVIYVVIAMIYPKPWSWADLSVIPALALIVLNCIWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL SVVQLLFFMTPIIWN+ TL+ QGAG W++IVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLFSVVQLLFFMTPIIWNDDTLRAQGAGRWSRIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHW VV A T +GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWAVVGALTAVGWVLAAFAMRQYRARVPYWV 276


>tr|Q7TVN9|Q7TVN9_MYCBO Tax_Id=1765 (rfbD)SubName: Full=PROBABLE
           O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT INTEGRAL MEMBRANE
           PROTEIN ABC TRANSPORTER RFBD;[Mycobacterium bovis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|P72049|P72049_MYCTU Tax_Id=1773 (rfbD)SubName: Full=O-antigen
           export system, permease protein; SubName: Full=PROBABLE
           O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT INTEGRAL MEMBRANE
           PROTEIN ABC TRANSPORTER RFBD;[Mycobacterium
           tuberculosis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|C6DNM6|C6DNM6_MYCTK Tax_Id=478434 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium
           tuberculosis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|C1AIN8|C1AIN8_MYCBT Tax_Id=561275 (rfbD)SubName: Full=Putative
           O-antigen/lipopolysaccharide transport integral membrane
           protein ABC transporter;[Mycobacterium bovis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|A5WU03|A5WU03_MYCTF Tax_Id=336982 SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter rfbD;[Mycobacterium
           tuberculosis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|A5U9B2|A5U9B2_MYCTA Tax_Id=419947 (rfbD)SubName:
           Full=O-antigen/lipopolysaccharide ABC transporter
           permease protein RfbD;[Mycobacterium tuberculosis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|A1KQB7|A1KQB7_MYCBP Tax_Id=410289 (rfbD)SubName: Full=Probable
           O-antigen/lipopolysaccharide transport integral membrane
           protein ABC transporter rfbD;[Mycobacterium bovis]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D6G5R1|D6G5R1_MYCTU Tax_Id=478435 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           KZN 605]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D6FUI4|D6FUI4_MYCTU Tax_Id=611304 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           K85]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D6FBC5|D6FBC5_MYCTU Tax_Id=611303 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           CPHL_A]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D6EZD8|D6EZD8_MYCTU Tax_Id=611302 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           T46]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D5ZMY4|D5ZMY4_MYCTU Tax_Id=537210 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           T17]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D5Z905|D5Z905_MYCTU Tax_Id=537209 SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter rfbD;[Mycobacterium
           tuberculosis GM 1503]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D5YLN7|D5YLN7_MYCTU Tax_Id=520140 SubName:
           Full=O-antigen/lipopolysaccharide ABC transporter
           permease RfbD;[Mycobacterium tuberculosis EAS054]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D5YA41|D5YA41_MYCTU Tax_Id=520141 SubName:
           Full=O-antigen/lipopolysaccharide ABC transporter
           permease RfbD;[Mycobacterium tuberculosis T85]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|D5XNU0|D5XNU0_MYCTU Tax_Id=515617 SubName:
           Full=O-antigen/lipopolysaccharide transport membrane
           protein ABC transporter rfbD;[Mycobacterium tuberculosis
           T92]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|A4KMQ2|A4KMQ2_MYCTU Tax_Id=395095 SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter rfbD;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|A2VMG4|A2VMG4_MYCTU Tax_Id=348776 SubName:
           Full=O-antigen/lipopolysaccharide transport integral
           membrane protein ABC transporter rfbD;[Mycobacterium
           tuberculosis C]
          Length = 280

 Score =  443 bits (1139), Expect = e-122
 Identities = 214/280 (76%), Positives = 234/280 (83%), Gaps = 4/280 (1%)

Query: 1   MTFTDAAA----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIAT 56
           MTF DA A    QS+T+AR R DLV+GF + ELW HLGWQDIKQRYRRSVLGPFWITIAT
Sbjct: 1   MTFMDAQASFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITIAT 60

Query: 57  GATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTP 116
           G TAVAMG LYSKLF+LELSEHLPYVTLGLI+WNLINA+IL+GAEVF+ANEGLIKQLP P
Sbjct: 61  GTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFVANEGLIKQLPAP 120

Query: 117 LSVHVYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFG 176
           LSVHVYRLVWRQ                 +PKPW+W DL+ +PAL LI LN VWV+LCFG
Sbjct: 121 LSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWADLSFLPALALIFLNCVWVSLCFG 180

Query: 177 ILATRYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAP 236
           ILATRYRDIGPLL SVVQLLFFMTPIIWN+ TL++QGAG W+ IVE+NPLLHYLDIVRAP
Sbjct: 181 ILATRYRDIGPLLFSVVQLLFFMTPIIWNDETLRRQGAGRWSSIVELNPLLHYLDIVRAP 240

Query: 237 LLGADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LLGA QELRHWLVVL  TV+GW  AAFAMRQYR RVPYWV
Sbjct: 241 LLGAHQELRHWLVVLVLTVVGWMLAAFAMRQYRARVPYWV 280


>tr|Q9CDA2|Q9CDA2_MYCLE Tax_Id=1769 SubName: Full=Putative ABC
           transporter component;[Mycobacterium leprae]
          Length = 276

 Score =  439 bits (1129), Expect = e-121
 Identities = 209/276 (75%), Positives = 230/276 (83%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T+ARAR DL+EG  + ELW HLGWQDIKQRYRRSVLGPFWITIATG T+
Sbjct: 1   MTFVDAAAQSRTLARARSDLIEGLHRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTS 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           +AMG LYSKLF L+LS HLPYVTLGLIIWNLINA+ILEGAEVF+ANEGLIKQLPTPLSVH
Sbjct: 61  IAMGGLYSKLFHLDLSVHLPYVTLGLIIWNLINAAILEGAEVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 +PKPW+W DL+V PAL L++LN VWV+LCFGILAT
Sbjct: 121 VYRLVWRQTILFTHNIIIYLVVGILFPKPWSWADLSVFPALALVILNSVWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL SVVQLLFF+TPIIWN+  L+QQG G W+ IVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLFSVVQLLFFITPIIWNDDALRQQGEGRWSSIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHW VV+  T  GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWAVVVTLTAAGWLLAAFAMRQYRARVPYWV 276


>tr|B8ZTW7|B8ZTW7_MYCLB Tax_Id=561304 SubName: Full=Putative ABC
           transporter component;[Mycobacterium leprae]
          Length = 276

 Score =  439 bits (1129), Expect = e-121
 Identities = 209/276 (75%), Positives = 230/276 (83%)

Query: 1   MTFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATA 60
           MTF DAAAQS+T+ARAR DL+EG  + ELW HLGWQDIKQRYRRSVLGPFWITIATG T+
Sbjct: 1   MTFVDAAAQSRTLARARSDLIEGLHRHELWLHLGWQDIKQRYRRSVLGPFWITIATGTTS 60

Query: 61  VAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVH 120
           +AMG LYSKLF L+LS HLPYVTLGLIIWNLINA+ILEGAEVF+ANEGLIKQLPTPLSVH
Sbjct: 61  IAMGGLYSKLFHLDLSVHLPYVTLGLIIWNLINAAILEGAEVFVANEGLIKQLPTPLSVH 120

Query: 121 VYRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILAT 180
           VYRLVWRQ                 +PKPW+W DL+V PAL L++LN VWV+LCFGILAT
Sbjct: 121 VYRLVWRQTILFTHNIIIYLVVGILFPKPWSWADLSVFPALALVILNSVWVSLCFGILAT 180

Query: 181 RYRDIGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGA 240
           RYRDIGPLL SVVQLLFF+TPIIWN+  L+QQG G W+ IVE+NPLLHYLDIVRAPLLGA
Sbjct: 181 RYRDIGPLLFSVVQLLFFITPIIWNDDALRQQGEGRWSSIVELNPLLHYLDIVRAPLLGA 240

Query: 241 DQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            QELRHW VV+  T  GW  AAFAMRQYR RVPYWV
Sbjct: 241 HQELRHWAVVVTLTAAGWLLAAFAMRQYRARVPYWV 276


>tr|C3JQ90|C3JQ90_RHOER Tax_Id=596309 SubName: Full=O-antigen export
           system, permease protein;[Rhodococcus erythropolis
           SK121]
          Length = 282

 Score =  378 bits (971), Expect = e-103
 Identities = 183/270 (67%), Positives = 209/270 (77%)

Query: 7   AAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVL 66
           A  S+T ARA +DL EG   RELW HLGWQDIKQRYRRS+LGPFWITIATG TAVAMG+L
Sbjct: 13  APASRTFARAIQDLREGLGHRELWFHLGWQDIKQRYRRSILGPFWITIATGTTAVAMGIL 72

Query: 67  YSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVW 126
           YS LF L+++E LPYVTLG I+WN+I+ +ILEGAEVFI+NEGLIKQLPTPLSVHVYRLVW
Sbjct: 73  YSSLFNLDVAEFLPYVTLGFIVWNMISGAILEGAEVFISNEGLIKQLPTPLSVHVYRLVW 132

Query: 127 RQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIG 186
           RQ                 +PK  +WTDL+ IPAL LI +N VWV+L FGIL+TRYRDIG
Sbjct: 133 RQLILFAHNFVIYIVILIVFPKQLSWTDLSFIPALALIAINAVWVSLVFGILSTRYRDIG 192

Query: 187 PLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGADQELRH 246
           PLLASVVQLLFFMTPIIW E +LQ       A+I E+NPL H+LDIVR PLLG DQ+L H
Sbjct: 193 PLLASVVQLLFFMTPIIWTEKSLQGTANAERARIAELNPLYHFLDIVRTPLLGGDQQLYH 252

Query: 247 WLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           W++VLA TV+GW  A  AMR YR RV YWV
Sbjct: 253 WVIVLAVTVVGWGLALLAMRNYRSRVAYWV 282


>tr|B1MEN7|B1MEN7_MYCA9 Tax_Id=561007 SubName: Full=Probable
           O-antigen/lipopolysaccharide transport integral membrane
           protein ABC transporter RfbD;[Mycobacterium abscessus]
          Length = 295

 Score =  372 bits (954), Expect = e-101
 Identities = 177/272 (65%), Positives = 212/272 (77%), Gaps = 1/272 (0%)

Query: 5   DAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMG 64
           + ++ S+T  RA RDL EGF  R+LW  LGWQDIKQRYRRSVLGPFWITIATG+TA+AMG
Sbjct: 25  ELSSDSRTFKRAWRDLSEGFEHRQLWLQLGWQDIKQRYRRSVLGPFWITIATGSTALAMG 84

Query: 65  VLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRL 124
           +LYS+LFKL L+EHLPYVT+GLI+WNL NA+ILEG++VF+ANEGLIKQLPTPLSVHVYRL
Sbjct: 85  ILYSQLFKLPLAEHLPYVTIGLIVWNLFNAAILEGSDVFVANEGLIKQLPTPLSVHVYRL 144

Query: 125 VWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRD 184
           VWRQ                 Y   W +TDL+ IPAL LI LN +WV+L FG+LATRYRD
Sbjct: 145 VWRQLLLFAHNIIIFLIVVAVYTPHWHFTDLSFIPALVLITLNCLWVSLVFGVLATRYRD 204

Query: 185 IGPLLASVVQLLFFMTPIIWNESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGADQEL 244
           I PLL S+VQLLFFMTPIIWNE+ L Q+  G  A +V++NP +H+L I+R PLLG DQ+L
Sbjct: 205 ISPLLGSLVQLLFFMTPIIWNENMLNQR-VGKLATVVQLNPFVHFLAIIRDPLLGLDQQL 263

Query: 245 RHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
            HW++ L+ TV+GW  A   MRQYR RVPYWV
Sbjct: 264 HHWIIALSITVVGWIVAIVVMRQYRARVPYWV 295


>tr|Q0S974|Q0S974_RHOSR Tax_Id=101510 SubName: Full=ABC O-antigen
           transporter, permease component;[Rhodococcus sp.]
          Length = 292

 Score =  337 bits (864), Expect = 9e-91
 Identities = 164/274 (59%), Positives = 200/274 (72%), Gaps = 4/274 (1%)

Query: 7   AAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVL 66
           A+ S+T  RA +DL +GFA+RELW  LGWQDIKQRYRRSV+GPFWITIATG  A AMG+L
Sbjct: 19  ASDSQTFRRAFKDLRDGFAQRELWLSLGWQDIKQRYRRSVIGPFWITIATGVQAAAMGIL 78

Query: 67  YSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVW 126
           YS L  + L E LPYVT+GLI+WNLI+ASILEG+EVFIANEGLIKQLP+ LSVHVYRLVW
Sbjct: 79  YSALLDIPLDEFLPYVTVGLIVWNLISASILEGSEVFIANEGLIKQLPSALSVHVYRLVW 138

Query: 127 RQXXXXXXXXXXXXXXXXXYP--KPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRD 184
           RQ                 +   +  TW  LA IPA+ LI++N  WV++ FGI +TRYRD
Sbjct: 139 RQLLLFAHNLVIYVIMLFAFGVWRHLTWMSLAAIPAIALIVVNAAWVSIMFGIFSTRYRD 198

Query: 185 IGPLLASVVQLLFFMTPIIWNESTLQQQG--AGSWAKIVEINPLLHYLDIVRAPLLGADQ 242
           I P+L S+  LLF +TPI+W   +L+ QG  A    K+ E+NPL HYLDIVRAP++G DQ
Sbjct: 199 IAPILGSMTLLLFVLTPIMWTTQSLEAQGGQAAERVKLAELNPLFHYLDIVRAPMIGQDQ 258

Query: 243 ELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           +  HW +VLA TV+GW  A  A+R+YR RVPYWV
Sbjct: 259 QAYHWYIVLAITVVGWAAAILALRKYRARVPYWV 292


>tr|C1B972|C1B972_RHOOB Tax_Id=632772 SubName: Full=Putative ABC
           transporter permease protein;[Rhodococcus opacus]
          Length = 290

 Score =  337 bits (864), Expect = 9e-91
 Identities = 164/274 (59%), Positives = 200/274 (72%), Gaps = 4/274 (1%)

Query: 7   AAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVL 66
           A+ S+T  RA +DL +GFA+RELW  LGWQDIKQRYRRSV+GPFWITIATG  A AMG+L
Sbjct: 17  ASDSQTFRRAFKDLRDGFAQRELWLSLGWQDIKQRYRRSVIGPFWITIATGVQAAAMGIL 76

Query: 67  YSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVW 126
           YS L  + L E LPYVT+GLI+WNLI+ASILEG+EVFIANEGLIKQLP+ LSVHVYRLVW
Sbjct: 77  YSALLDIPLDEFLPYVTVGLIVWNLISASILEGSEVFIANEGLIKQLPSALSVHVYRLVW 136

Query: 127 RQXXXXXXXXXXXXXXXXXYP--KPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRD 184
           RQ                 +   +  TW  LA IPA+ LI++N  WV++ FGI +TRYRD
Sbjct: 137 RQLLLFAHNLVIYVIMLFAFGVWRHLTWMSLAAIPAIALIVVNAAWVSIMFGIFSTRYRD 196

Query: 185 IGPLLASVVQLLFFMTPIIWNESTLQQQG--AGSWAKIVEINPLLHYLDIVRAPLLGADQ 242
           I P+L S+  LLF +TPI+W   +L+ QG  A    K+ E+NPL HYLDIVRAP++G DQ
Sbjct: 197 IAPILGSMTLLLFVLTPIMWTTQSLEAQGGQAAERVKLAELNPLFHYLDIVRAPMIGQDQ 256

Query: 243 ELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           +  HW +VLA TV+GW  A  A+R+YR RVPYWV
Sbjct: 257 QAYHWYIVLAITVVGWAAAILALRKYRARVPYWV 290


>tr|C0ZLZ1|C0ZLZ1_RHOE4 Tax_Id=234621 SubName: Full=Putative ABC
           transporter permease protein;[Rhodococcus erythropolis]
          Length = 290

 Score =  333 bits (853), Expect = 2e-89
 Identities = 160/273 (58%), Positives = 199/273 (72%), Gaps = 4/273 (1%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           + S+T  RA +DL +G  +RELW  LGWQDIKQRYRRSV+GPFWITIATG  A A+G+LY
Sbjct: 18  SDSQTFRRAFKDLRDGLNQRELWLSLGWQDIKQRYRRSVIGPFWITIATGVQATAIGILY 77

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           + L  + L E LPYVT+GLI+WNLINASI+EG+EVF+ANEGLIKQLP+ LSVH+YRLVWR
Sbjct: 78  AALLDMPLQEFLPYVTVGLIVWNLINASIIEGSEVFVANEGLIKQLPSALSVHIYRLVWR 137

Query: 128 QXXXXXXXXXXXXXXXXXYP--KPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDI 185
           Q                 +   +  +W  LA IPALGLI+LN +WV++ FGI ATRYRDI
Sbjct: 138 QMLFFAHNLLIYVIMVIAFGVWRNLSWASLAAIPALGLIVLNALWVSIVFGIFATRYRDI 197

Query: 186 GPLLASVVQLLFFMTPIIWNESTLQQQGAG--SWAKIVEINPLLHYLDIVRAPLLGADQE 243
            P+L+S+  LLF +TPI+W   +L+ QG      AKI E+NPL HYLDIVRAP++G  QE
Sbjct: 198 APILSSLTLLLFVLTPIMWTTQSLEAQGGAVRDRAKIAELNPLFHYLDIVRAPMIGQPQE 257

Query: 244 LRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           L HW +V+  TV+GW  A  A+R+YR RVPYWV
Sbjct: 258 LYHWYIVITITVVGWAVALLALRKYRARVPYWV 290


>tr|D5PKX3|D5PKX3_COREQ Tax_Id=525370 (rfbD2)SubName: Full=O-antigen
           export system;[Rhodococcus equi ATCC 33707]
          Length = 293

 Score =  333 bits (853), Expect = 2e-89
 Identities = 162/273 (59%), Positives = 199/273 (72%), Gaps = 4/273 (1%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           + S+T  RA +DL +GFA+RELW +LGWQDIKQRYRRSV+GPFWITIATG  A AMG+LY
Sbjct: 21  SDSQTFRRAFKDLRDGFAQRELWLNLGWQDIKQRYRRSVIGPFWITIATGVQATAMGILY 80

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           S L  + + E LPYVT+GLI+W +I+ASILEG+EVFIANEGLIKQLP+ LSVHVYRLVWR
Sbjct: 81  SALLGMSIKEFLPYVTVGLIVWAMISASILEGSEVFIANEGLIKQLPSALSVHVYRLVWR 140

Query: 128 QXXXXXXXXXXXXXXXXXYP--KPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDI 185
           Q                 +   +  TW DLA IPAL L++LN +WV++ FGI ATRYRDI
Sbjct: 141 QILFFAHNLLIYVIMLVAFGVWRNLTWPDLAAIPALALLVLNALWVSIVFGIFATRYRDI 200

Query: 186 GPLLASVVQLLFFMTPIIWNESTLQQQG--AGSWAKIVEINPLLHYLDIVRAPLLGADQE 243
            P+L S+  LLF +TPI W+   L+ QG      AKI E+NPL H+L+IVRAP+LG DQ+
Sbjct: 201 APILGSLTLLLFVLTPIFWSTEALKAQGGQVAERAKIAELNPLFHFLEIVRAPMLGKDQQ 260

Query: 244 LRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
             HW +VLA T +GW  A FA+R+YR RV YWV
Sbjct: 261 AYHWYIVLAITAVGWAIALFALRKYRARVAYWV 293


>tr|Q5Z3D0|Q5Z3D0_NOCFA Tax_Id=37329 SubName: Full=Putative ABC
           transporter membrane protein;[Nocardia farcinica]
          Length = 294

 Score =  328 bits (840), Expect = 6e-88
 Identities = 162/273 (59%), Positives = 200/273 (73%), Gaps = 4/273 (1%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           + S+T  RA RD+ +GF +RELW  LGWQDIKQRYRRSVLGPFWITIATG  A AMG+LY
Sbjct: 22  SDSQTFRRAFRDMRDGFGQRELWLSLGWQDIKQRYRRSVLGPFWITIATGVQAAAMGILY 81

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           + L    L E+LPYVT+GLI+WN+I+ASILEG++VFIANEGLIKQLP+ LSVHVYRLVWR
Sbjct: 82  ATLLGQPLREYLPYVTVGLIVWNVISASILEGSDVFIANEGLIKQLPSALSVHVYRLVWR 141

Query: 128 QXXXXXXXXXXXXXXXXXYP--KPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDI 185
           Q                 +   +   W+ L  +PA+GLI LN +WV++ FGI +TRYRDI
Sbjct: 142 QMLFFAHNLVIYLVLLAAFGVWENLGWSSLLALPAIGLIFLNSMWVSIVFGIFSTRYRDI 201

Query: 186 GPLLASVVQLLFFMTPIIWNESTLQQQ-GAGS-WAKIVEINPLLHYLDIVRAPLLGADQE 243
            P+L S+  +LF +TP++W   TL+ Q G GS  A++VEI P  HYL+IVRAPLLG  Q 
Sbjct: 202 APILGSMTLMLFVLTPVMWTTKTLEDQIGTGSERARLVEIIPTFHYLEIVRAPLLGEPQA 261

Query: 244 LRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           LRHW++V A TV+GW  A FAM+QYR RVPYWV
Sbjct: 262 LRHWVIVGAITVVGWIVAVFAMKQYRSRVPYWV 294


>tr|D0LC98|D0LC98_GORB4 Tax_Id=526226 SubName: Full=ABC-2 type
           transporter;[Gordonia bronchialis]
          Length = 288

 Score =  322 bits (825), Expect = 3e-86
 Identities = 158/273 (57%), Positives = 193/273 (70%), Gaps = 3/273 (1%)

Query: 7   AAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVL 66
           ++ S+T+ RA +DL +G   RELW HLGWQDIKQRYRRSVLGP WITIATG TA+AMG+L
Sbjct: 16  SSDSRTLKRAVKDLRDGLDNRELWLHLGWQDIKQRYRRSVLGPLWITIATGVTAIAMGLL 75

Query: 67  YSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVW 126
           Y +LF  +L + LPYV LG I W  I +SILEG+E+F  NEGLIKQLP P+SVHVYR+VW
Sbjct: 76  YGELFDQDLHKFLPYVALGFIFWGFIESSILEGSEIFAKNEGLIKQLPAPVSVHVYRVVW 135

Query: 127 RQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIG 186
           RQ                 +P P+ ++ L VIPAL L +LN VWV++ FGIL+TR+RDIG
Sbjct: 136 RQLIIFAHNVVIIVIIFIVFPPPFGFSQLLVIPALLLFVLNAVWVSIVFGILSTRFRDIG 195

Query: 187 PLLASVVQLLFFMTPIIWNESTLQQQGAG---SWAKIVEINPLLHYLDIVRAPLLGADQE 243
            LL +VV+L+FFMTPIIW+  +L    AG   S  +IVEINP+ HYL+I R  LLG   E
Sbjct: 196 QLLTTVVRLVFFMTPIIWSAQSLSSTKAGESSSRLRIVEINPMFHYLEISRGELLGDHVE 255

Query: 244 LRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           L HWL+VL  T +GW  A F MR YR RV YWV
Sbjct: 256 LYHWLIVLGCTAVGWLMAMFVMRNYRARVAYWV 288


>tr|A4QAJ7|A4QAJ7_CORGB Tax_Id=340322 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium glutamicum]
          Length = 298

 Score =  319 bits (818), Expect = 2e-85
 Identities = 154/271 (56%), Positives = 196/271 (72%), Gaps = 2/271 (0%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           +QS T   A  D+V GF + ELW  LGWQDIKQRYRRSVLGP WITIATG  A+A+G+LY
Sbjct: 28  SQSMTFGAAWNDIVRGFKQHELWLQLGWQDIKQRYRRSVLGPLWITIATGVMALALGLLY 87

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           S LFK+ ++E LP+VT+GLIIWN I+  I EG+++FI NEGLIKQLP+ LSVHVYRLVW+
Sbjct: 88  SVLFKIPIAEFLPHVTVGLIIWNFISGCIKEGSDIFIDNEGLIKQLPSALSVHVYRLVWK 147

Query: 128 QXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIGP 187
           Q                 +P+P  W  L +IPA+ L+++N VWV + FGI+ATRYRD+ P
Sbjct: 148 QALFLAHNLVIWVILMMIFPRPLGWDVLLIIPAMFLLVINGVWVVMFFGIIATRYRDVSP 207

Query: 188 LLASVVQLLFFMTPIIWNESTLQQQGA--GSWAKIVEINPLLHYLDIVRAPLLGADQELR 245
           LL +  QLLF++TPI+W  STLQ Q A  G+ A++ E+NPL HYL+IVRAP++GAD    
Sbjct: 208 LLEAGTQLLFYVTPIVWMTSTLQSQSAEIGNRARLAELNPLYHYLEIVRAPMIGADLPAY 267

Query: 246 HWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           HW +VLAFT +G   A  AM+Q+R RV YWV
Sbjct: 268 HWWIVLAFTFVGLGLALLAMKQWRFRVSYWV 298


>tr|Q6M8F3|Q6M8F3_CORGL Tax_Id=1718 SubName:
           Full=Polysaccharide/polyol phosphate export systems,
           permease component;[Corynebacterium glutamicum]
          Length = 298

 Score =  319 bits (817), Expect = 3e-85
 Identities = 154/271 (56%), Positives = 196/271 (72%), Gaps = 2/271 (0%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           +QS T   A  D+V GF + ELW  LGWQDIKQRYRRSVLGP WITIATG  A+A+G+LY
Sbjct: 28  SQSMTFGAAWNDIVRGFKQHELWLQLGWQDIKQRYRRSVLGPLWITIATGVMALALGLLY 87

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           S LFK+ ++E LP+VT+GLIIWN I+  I EG+++FI NEGLIKQLP+ LSVHVYRLVW+
Sbjct: 88  SVLFKIPIAEFLPHVTVGLIIWNFISGCIKEGSDIFIDNEGLIKQLPSALSVHVYRLVWK 147

Query: 128 QXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIGP 187
           Q                 +P+P  W  L +IPA+ L+++N VWV + FGI+ATRYRD+ P
Sbjct: 148 QALFLAHNLVIWVILMMIFPRPLGWDVLLIIPAMFLLVINGVWVVMFFGIIATRYRDVSP 207

Query: 188 LLASVVQLLFFMTPIIWNESTLQQQGA--GSWAKIVEINPLLHYLDIVRAPLLGADQELR 245
           LL +  QLLF++TPI+W  STLQ Q A  G+ A++ E+NPL HYL+IVRAP++GAD    
Sbjct: 208 LLEAGTQLLFYVTPIVWMTSTLQSQSAEIGNRARLAELNPLYHYLEIVRAPMVGADLPAY 267

Query: 246 HWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           HW +VLAFT +G   A  AM+Q+R RV YWV
Sbjct: 268 HWWIVLAFTFVGLGLALLAMKQWRFRVSYWV 298


>tr|Q8NTV1|Q8NTV1_CORGL Tax_Id=1718 SubName: Full=ABC-type
           transporter, permease components;[Corynebacterium
           glutamicum]
          Length = 268

 Score =  315 bits (808), Expect = 3e-84
 Identities = 152/267 (56%), Positives = 193/267 (72%), Gaps = 2/267 (0%)

Query: 12  TMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLYSKLF 71
           T   A  D+V GF + ELW  LGWQDIKQRYRRSVLGP WITIATG  A+A+G+LYS LF
Sbjct: 2   TFGAAWNDIVRGFKQHELWLQLGWQDIKQRYRRSVLGPLWITIATGVMALALGLLYSVLF 61

Query: 72  KLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWRQXXX 131
           K+ ++E LP+VT+GLIIWN I+  I EG+++FI NEGLIKQLP+ LSVHVYRLVW+Q   
Sbjct: 62  KIPIAEFLPHVTVGLIIWNFISGCIKEGSDIFIDNEGLIKQLPSALSVHVYRLVWKQALF 121

Query: 132 XXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIGPLLAS 191
                         +P+P  W  L +IPA+ L+++N VWV + FGI+ATRYRD+ PLL +
Sbjct: 122 LAHNLVIWVILMMIFPRPLGWDVLLIIPAMFLLVINGVWVVMFFGIIATRYRDVSPLLEA 181

Query: 192 VVQLLFFMTPIIWNESTLQQQGA--GSWAKIVEINPLLHYLDIVRAPLLGADQELRHWLV 249
             QLLF++TPI+W  STLQ Q A  G+ A++ E+NPL HYL+IVRAP++GAD    HW +
Sbjct: 182 GTQLLFYVTPIVWMTSTLQSQSAEIGNRARLAELNPLYHYLEIVRAPMVGADLPAYHWWI 241

Query: 250 VLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           VLAFT +G   A  AM+Q+R RV YWV
Sbjct: 242 VLAFTFVGLGLALLAMKQWRFRVSYWV 268


>tr|Q8FU43|Q8FU43_COREF Tax_Id=152794 SubName: Full=Putative
           O-antigen export system permease
           protein;[Corynebacterium efficiens]
          Length = 323

 Score =  315 bits (807), Expect = 4e-84
 Identities = 154/271 (56%), Positives = 193/271 (71%), Gaps = 2/271 (0%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           +QS T   A  D+V GF + ELW  LGWQDIKQRYRRSVLGP WITIATG  AVA+G+LY
Sbjct: 53  SQSMTFRAAWDDIVRGFKQHELWLQLGWQDIKQRYRRSVLGPLWITIATGVMAVALGLLY 112

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           S LFK+ L+E LP+VT+GLIIWN I+  I EGA++FI NEGLIKQLP+ LSVHVYRLVW+
Sbjct: 113 SVLFKIPLAEFLPHVTVGLIIWNFISGCIKEGADIFIDNEGLIKQLPSALSVHVYRLVWK 172

Query: 128 QXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIGP 187
           Q                 +P+P  W  L +IP + L+++N VWVA+ FGI+ATRYRD+ P
Sbjct: 173 QALFLGHNLVIWVILMLIFPRPLGWDVLLIIPGMFLLIVNGVWVAMFFGIIATRYRDVSP 232

Query: 188 LLASVVQLLFFMTPIIWNESTLQ--QQGAGSWAKIVEINPLLHYLDIVRAPLLGADQELR 245
           LL +  QLLF++TPI+W  STLQ   +  G  A++ E+NPL HYL++VRAP++G+D    
Sbjct: 233 LLEAGTQLLFYVTPIVWMTSTLQNHSEEMGGRARLAELNPLYHYLEVVRAPMIGSDLPAY 292

Query: 246 HWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           HW +VL FTV G   A  AMRQ+R RV YWV
Sbjct: 293 HWWIVLGFTVAGLGLALLAMRQWRFRVSYWV 323


>tr|C8NRC6|C8NRC6_COREF Tax_Id=196164 (rfbD)SubName: Full=O-antigen
           export system, permease protein;[Corynebacterium
           efficiens YS-314]
          Length = 300

 Score =  315 bits (807), Expect = 4e-84
 Identities = 154/271 (56%), Positives = 193/271 (71%), Gaps = 2/271 (0%)

Query: 8   AQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAVAMGVLY 67
           +QS T   A  D+V GF + ELW  LGWQDIKQRYRRSVLGP WITIATG  AVA+G+LY
Sbjct: 30  SQSMTFRAAWDDIVRGFKQHELWLQLGWQDIKQRYRRSVLGPLWITIATGVMAVALGLLY 89

Query: 68  SKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHVYRLVWR 127
           S LFK+ L+E LP+VT+GLIIWN I+  I EGA++FI NEGLIKQLP+ LSVHVYRLVW+
Sbjct: 90  SVLFKIPLAEFLPHVTVGLIIWNFISGCIKEGADIFIDNEGLIKQLPSALSVHVYRLVWK 149

Query: 128 QXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATRYRDIGP 187
           Q                 +P+P  W  L +IP + L+++N VWVA+ FGI+ATRYRD+ P
Sbjct: 150 QALFLGHNLVIWVILMLIFPRPLGWDVLLIIPGMFLLIVNGVWVAMFFGIIATRYRDVSP 209

Query: 188 LLASVVQLLFFMTPIIWNESTLQ--QQGAGSWAKIVEINPLLHYLDIVRAPLLGADQELR 245
           LL +  QLLF++TPI+W  STLQ   +  G  A++ E+NPL HYL++VRAP++G+D    
Sbjct: 210 LLEAGTQLLFYVTPIVWMTSTLQNHSEEMGGRARLAELNPLYHYLEVVRAPMIGSDLPAY 269

Query: 246 HWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           HW +VL FTV G   A  AMRQ+R RV YWV
Sbjct: 270 HWWIVLGFTVAGLGLALLAMRQWRFRVSYWV 300


>tr|Q6NK62|Q6NK62_CORDI Tax_Id=1717 SubName: Full=Putative ABC
           transport system, permease protein;[Corynebacterium
           diphtheriae]
          Length = 286

 Score =  312 bits (800), Expect = 2e-83
 Identities = 156/277 (56%), Positives = 194/277 (70%), Gaps = 2/277 (0%)

Query: 2   TFTDAAAQSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITIATGATAV 61
           T  D  +QSKT+A A  DLV GF++RELW  LGWQDIKQRYRRSVLGP WITIATG  A+
Sbjct: 10  TTADEPSQSKTLAAAWADLVRGFSQRELWLQLGWQDIKQRYRRSVLGPLWITIATGVMAL 69

Query: 62  AMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFIANEGLIKQLPTPLSVHV 121
           A+G+LYS LFK+ +++ LP+VT+GLI+WN I   I EG+EVFIANEGLIKQLP+ LSVHV
Sbjct: 70  ALGLLYSVLFKIPVAQFLPHVTVGLIMWNFIAGCIKEGSEVFIANEGLIKQLPSALSVHV 129

Query: 122 YRLVWRQXXXXXXXXXXXXXXXXXYPKPWTWTDLAVIPALGLIMLNMVWVALCFGILATR 181
           YRLVW+Q                 +P+P  W  L  IPAL L++ N VWV + FGI+ATR
Sbjct: 130 YRLVWKQTLFLMHNMVIWVILMAIFPRPLGWDILLGIPALALLIANGVWVTMFFGIVATR 189

Query: 182 YRDIGPLLASVVQLLFFMTPIIWNESTLQQQG--AGSWAKIVEINPLLHYLDIVRAPLLG 239
           YRD  PLL ++ QLLF++TPI+W   TL  QG      AK+  +NPL HY++++RAPL+G
Sbjct: 190 YRDFSPLLEALTQLLFYVTPIVWTTETLYSQGGAVSERAKLAMLNPLYHYMEVIRAPLIG 249

Query: 240 ADQELRHWLVVLAFTVIGWTFAAFAMRQYRGRVPYWV 276
           A     +W+VV   TVIG   A  AMRQ+R RV YWV
Sbjct: 250 APIHPLNWIVVGCCTVIGLFIAMLAMRQWRFRVSYWV 286


  Database: Amellifera_nr
    Posted date:  Jul 23, 2010  5:10 AM
  Number of letters in database: 4,236,830,644
  Number of sequences in database:  12,507,864
  
Lambda     K      H
   0.328    0.140    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 12507864
Number of Hits to DB: 2,147,248,612
Number of extensions: 82160637
Number of successful extensions: 250471
Number of sequences better than 10.0: 1037
Number of HSP's gapped: 250499
Number of HSP's successfully gapped: 1110
Length of query: 276
Length of database: 4,236,830,644
Length adjustment: 136
Effective length of query: 140
Effective length of database: 2,535,761,140
Effective search space: 355006559600
Effective search space used: 355006559600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 80 (35.4 bits)