BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6421 (623 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R646|A0R646_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 513 e-143 tr|A3Q7Q4|A3Q7Q4_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope... 405 e-110 tr|Q1B1U2|Q1B1U2_MYCSS Tax_Id=164756 SubName: Full=Cell envelope... 404 e-110 tr|A1UNA7|A1UNA7_MYCSK Tax_Id=189918 SubName: Full=Cell envelope... 404 e-110 tr|A4T6G5|A4T6G5_MYCGI Tax_Id=350054 SubName: Full=Cell envelope... 384 e-104 tr|A1TGY0|A1TGY0_MYCVP Tax_Id=350058 SubName: Full=Cell envelope... 379 e-103 tr|B2HMM7|B2HMM7_MYCMM Tax_Id=216594 SubName: Full=Transcription... 342 7e-92 tr|D5P234|D5P234_9MYCO Tax_Id=525368 SubName: Full=Transcription... 341 2e-91 tr|A0PX19|A0PX19_MYCUA Tax_Id=362242 SubName: Full=Transcription... 336 7e-90 tr|A0Q992|A0Q992_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 327 3e-87 tr|Q745J4|Q745J4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 323 6e-86 tr|B1MEG4|B1MEG4_MYCA9 Tax_Id=561007 SubName: Full=Possible tran... 313 5e-83 tr|C1B901|C1B901_RHOOB Tax_Id=632772 SubName: Full=Putative LytR... 300 3e-79 tr|C3JR11|C3JR11_RHOER Tax_Id=596309 SubName: Full=Transcription... 298 2e-78 tr|Q0S9G0|Q0S9G0_RHOSR Tax_Id=101510 SubName: Full=Probable tran... 296 6e-78 tr|C0ZLR4|C0ZLR4_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 293 7e-77 tr|D5PVA3|D5PVA3_COREQ Tax_Id=525370 SubName: Full=Transcription... 277 4e-72 tr|Q5Z3M0|Q5Z3M0_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 274 3e-71 tr|C4LLQ8|C4LLQ8_CORK4 Tax_Id=645127 (lytR1)SubName: Full=Putati... 273 7e-71 tr|Q8FLW3|Q8FLW3_COREF Tax_Id=152794 SubName: Full=Putative unch... 265 1e-68 tr|C8NJE3|C8NJE3_COREF Tax_Id=196164 SubName: Full=Transcription... 265 1e-68 tr|D1ACP3|D1ACP3_THECD Tax_Id=471852 SubName: Full=Cell envelope... 257 3e-66 tr|C8NY97|C8NY97_9CORY Tax_Id=585529 SubName: Full=Transcription... 254 2e-65 tr|Q8NLN8|Q8NLN8_CORGL Tax_Id=1718 SubName: Full=Transcriptional... 254 3e-65 tr|Q6M1W2|Q6M1W2_CORGL Tax_Id=1718 SubName: Full=Cell envelope-r... 254 3e-65 tr|D5UQ22|D5UQ22_TSUPA Tax_Id=521096 SubName: Full=Cell envelope... 252 1e-64 tr|C2BIZ3|C2BIZ3_9CORY Tax_Id=525264 SubName: Full=Transcription... 249 7e-64 tr|C5V8N8|C5V8N8_9CORY Tax_Id=553207 SubName: Full=Transcription... 249 9e-64 tr|C0E5U0|C0E5U0_9CORY Tax_Id=566549 SubName: Full=Putative unch... 249 9e-64 tr|Q6NEM2|Q6NEM2_CORDI Tax_Id=1717 SubName: Full=Putative membra... 248 1e-63 tr|C6R7F2|C6R7F2_9CORY Tax_Id=553206 SubName: Full=Transcription... 248 2e-63 tr|C6WBH2|C6WBH2_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 246 6e-63 tr|A4QHU8|A4QHU8_CORGB Tax_Id=340322 SubName: Full=Putative unch... 244 2e-62 tr|C2CRD8|C2CRD8_CORST Tax_Id=525268 SubName: Full=Transcription... 244 3e-62 tr|C0WG87|C0WG87_9CORY Tax_Id=525260 SubName: Full=Transcription... 242 1e-61 tr|C0XNM6|C0XNM6_9CORY Tax_Id=525263 SubName: Full=Transcription... 241 2e-61 tr|C3PK90|C3PK90_CORA7 Tax_Id=548476 (lytR1)SubName: Full=Transc... 241 3e-61 tr|Q4JY39|Q4JY39_CORJK Tax_Id=306537 SubName: Full=Putative unch... 237 3e-60 tr|C8RSW0|C8RSW0_CORJE Tax_Id=525262 SubName: Full=Transcription... 237 3e-60 tr|A4FG61|A4FG61_SACEN Tax_Id=405948 SubName: Full=Probable tran... 237 4e-60 tr|A4FD71|A4FD71_SACEN Tax_Id=405948 SubName: Full=Probable tran... 237 4e-60 tr|A4FN51|A4FN51_SACEN Tax_Id=405948 SubName: Full=Probable tran... 236 6e-60 tr|C7MT33|C7MT33_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 234 2e-59 tr|B1VE97|B1VE97_CORU7 Tax_Id=504474 (lytR1)SubName: Full=Putati... 232 1e-58 tr|Q47LS2|Q47LS2_THEFY Tax_Id=269800 SubName: Full=Cell envelope... 228 2e-57 >tr|A0R646|A0R646_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator;[Mycobacterium smegmatis] Length = 623 Score = 513 bits (1320), Expect = e-143 Identities = 258/295 (87%), Positives = 258/295 (87%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQAS Sbjct: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASLTTGGDLGTGRTDT 388 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIPALGSSTPATMVSIPRDSYVEIPGYGEDKIN QTVESATGLRL Sbjct: 389 ILLVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINAAFALGGAPLLAQTVESATGLRL 448 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV Sbjct: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVRTRATA 508 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW Sbjct: 509 RADLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENAVN 623 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENAVN Sbjct: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENAVN 623 Score = 180 bits (457), Expect = 5e-43 Identities = 94/170 (55%), Positives = 94/170 (55%) Query: 44 HPGPECXXXXXXXXXXXXAHPGAARLGLCQRVGRGDHRRGFPAHPPAPTRHQPHAGVXXX 103 HPGPEC AHPGAARLGLCQRVGRGDHRRGFPAHPPAPTRHQPHAGV Sbjct: 44 HPGPECRRRTRRVVRHVVAHPGAARLGLCQRVGRGDHRRGFPAHPPAPTRHQPHAGVGAL 103 Query: 104 XXXXXXXXXXXXXXXXXXXSGDGPGXXXXXXXXXXXXXXDHRPHSDXXXXXXXXCPVGAT 163 SGDGPG DHRPHSD CPVGAT Sbjct: 104 GAAARGLPPLPGLQRGPGQSGDGPGVRLRVAAHRAAVAADHRPHSDRRGRVRRVCPVGAT 163 Query: 164 SRLVAVAATYIAEMNGFTXXXXXXXXXXXXXXXXXXXXEPSQFIRRDPNY 213 SRLVAVAATYIAEMNGFT EPSQFIRRDPNY Sbjct: 164 SRLVAVAATYIAEMNGFTPADGDRDPRMRRPGTPRPSGEPSQFIRRDPNY 213 >tr|A3Q7Q4|A3Q7Q4_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Mycobacterium sp.] Length = 311 Score = 405 bits (1040), Expect = e-110 Identities = 203/291 (69%), Positives = 220/291 (75%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +WVDTSLQRIPALA YP+RPAAGRGTTWLLVGSDSR GL EQQA Sbjct: 16 VWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDT 75 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+P L SS PATMVSIPRDSYV IPGYGEDKIN QTVE ATG+RL Sbjct: 76 IMLVHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRL 135 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAE+GF GFAS+VDAVGGVT+CPAEPI+DPLAGIDLPAGCQELDGR ALGFV Sbjct: 136 DHYAEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATP 195 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM HQREFMS LLHRAASPAV LNPLRW PM AA G L VD AHVW+LARL W Sbjct: 196 RADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGW 255 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +LRGD T TVPIGEF + G+G VV+WDS+AA RLF+AL TD P+P DVL+ Sbjct: 256 ALRGDLTTTTVPIGEFTNGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLD 306 >tr|Q1B1U2|Q1B1U2_MYCSS Tax_Id=164756 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 311 Score = 404 bits (1039), Expect = e-110 Identities = 203/291 (69%), Positives = 219/291 (75%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +WVDTSLQRIPALA YP+RPAAGRGTTWLLVGSDSR GL EQQA Sbjct: 16 VWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDT 75 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+P L SS PATMVSIPRDSYV IPGYGEDKIN QTVE ATG+RL Sbjct: 76 IMLVHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRL 135 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAE+GF GFAS+VDAVGGVT+CPAEPI+DPLAGIDLPAGCQELDGR ALGFV Sbjct: 136 DHYAEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATP 195 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM HQREFMS LLHRAASPAV LNPLRW PM AA G L VD AHVW+LARL W Sbjct: 196 RADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGW 255 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +LRGD T TVPIGEF G+G VV+WDS+AA RLF+AL TD P+P DVL+ Sbjct: 256 ALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLD 306 >tr|A1UNA7|A1UNA7_MYCSK Tax_Id=189918 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Mycobacterium sp.] Length = 311 Score = 404 bits (1039), Expect = e-110 Identities = 203/291 (69%), Positives = 219/291 (75%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +WVDTSLQRIPALA YP+RPAAGRGTTWLLVGSDSR GL EQQA Sbjct: 16 VWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDT 75 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+P L SS PATMVSIPRDSYV IPGYGEDKIN QTVE ATG+RL Sbjct: 76 IMLVHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRL 135 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAE+GF GFAS+VDAVGGVT+CPAEPI+DPLAGIDLPAGCQELDGR ALGFV Sbjct: 136 DHYAEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATP 195 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM HQREFMS LLHRAASPAV LNPLRW PM AA G L VD AHVW+LARL W Sbjct: 196 RADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGW 255 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +LRGD T TVPIGEF G+G VV+WDS+AA RLF+AL TD P+P DVL+ Sbjct: 256 ALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLD 306 >tr|A4T6G5|A4T6G5_MYCGI Tax_Id=350054 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium gilvum] Length = 409 Score = 384 bits (985), Expect = e-104 Identities = 188/290 (64%), Positives = 214/290 (73%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W+D+SL R+PAL Y RP AG GTTWLLVGSD REGLTPEQQA Sbjct: 116 WIDSSLSRLPALTDYAGRPPAGAGTTWLLVGSDGREGLTPEQQAELTTGGDLGASRTDTI 175 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P +GSSTPATMVSIPRDSYV IP YG DKIN QTVE ATGLR+D Sbjct: 176 LLVHLPGIGSSTPATMVSIPRDSYVPIPEYGSDKINAAFSLGGPPLLAQTVEQATGLRID 235 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAE+GFGGFA +VDAVGGVTVCPAEPI+DPLAGIDLPAGCQELDGR ALG+V Sbjct: 236 HYAEVGFGGFAGMVDAVGGVTVCPAEPINDPLAGIDLPAGCQELDGRNALGYVRSRATAR 295 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDRM +QR+FMS L+ RA+SPAV LNPLRW P+ AA T+AVD+ HVW+LARL W+ Sbjct: 296 ADLDRMANQRQFMSALIERASSPAVLLNPLRWYPLASAAADTVAVDDGDHVWDLARLGWA 355 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 LRGD T+TVPIGEF N +G +V+WDS+ A RLF AL +D+PVP DVLE Sbjct: 356 LRGDVTTVTVPIGEFTENSAGSIVVWDSETAQRLFAALASDSPVPADVLE 405 >tr|A1TGY0|A1TGY0_MYCVP Tax_Id=350058 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium vanbaalenii] Length = 306 Score = 379 bits (974), Expect = e-103 Identities = 188/293 (64%), Positives = 215/293 (73%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W+D++L RI AL Y +RPA G GTTWLLVGSD REGLTPEQQA Sbjct: 12 VWIDSALTRISALTDYSDRPAQGEGTTWLLVGSDGREGLTPEQQAELATGGDLGASRTDT 71 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+P LGS+TPATMVSIPRDSYV IP YG DKIN +TVE ATGLR+ Sbjct: 72 ILVVHLPGLGSATPATMVSIPRDSYVSIPEYGSDKINAAFSVGGPRLLARTVELATGLRI 131 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGFGGFA LVDAVGGVT+CP PISDPLAGIDLPAGCQ LDGRTALG+V Sbjct: 132 DHYAEIGFGGFAELVDAVGGVTMCPEAPISDPLAGIDLPAGCQRLDGRTALGYVRSRATA 191 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM +QR+FMS L+ RAASP V LNPL+W PM RAA T+ V++ H+W+LARLAW Sbjct: 192 RADLDRMANQRQFMSALVDRAASPTVLLNPLKWYPMARAAADTVTVNDGDHIWDLARLAW 251 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENA 621 +LRGD V +TVPIGEF NGSG +V+WDS+AA RLF AL +D PVP DVL+ A Sbjct: 252 ALRGDIVNVTVPIGEFTENGSGSIVVWDSEAAQRLFGALASDTPVPQDVLDAA 304 >tr|B2HMM7|B2HMM7_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 409 Score = 342 bits (878), Expect = 7e-92 Identities = 167/291 (57%), Positives = 198/291 (68%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W+DT+L R P L Y +RP GRGT WL+VGSDSR+GLT EQQ Sbjct: 116 LWLDTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELTTGGDPGDGRTDT 175 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+ LGSSTP +VSIPRDSYV +PGYG DKIN QTVE ATGLR+ Sbjct: 176 ILLVHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRI 235 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGFGGFA LVDA+GGV +C EPI DPLAGIDL GCQ+LDGR+ALG+V Sbjct: 236 DHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATP 295 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRMI+QR+FMS LL RA SPAVWLNP RW + RAA L VD+ AHV++LARL W Sbjct: 296 RADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGW 355 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +L G P +TVPIGEF + G VV+W+ DAA +F+AL +D P+P D + Sbjct: 356 ALHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406 >tr|D5P234|D5P234_9MYCO Tax_Id=525368 SubName: Full=Transcriptional regulator; Flags: Fragment;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 325 Score = 341 bits (874), Expect = 2e-91 Identities = 169/286 (59%), Positives = 193/286 (67%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D+ L R L YP RP GRGT WLLVGSDSR+GL+ EQQ + Sbjct: 36 VWFDSRLHRDDILTDYPGRPGPGRGTNWLLVGSDSRQGLSAEQQENLATGGDIGSSRTDT 95 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+P LGS TMVS+PRDSYV IPG+G DKIN QTVE ATGLRL Sbjct: 96 ILLVHLPELGSGGRVTMVSLPRDSYVPIPGHGRDKINAAFAMGGATLLAQTVELATGLRL 155 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGFGGFA +VDA+GGVTVCP P+ DPLAGIDLPAGCQ+LDGR ALG+V Sbjct: 156 DHYAEIGFGGFAGVVDALGGVTVCPTAPLDDPLAGIDLPAGCQKLDGRNALGYVRTRDTP 215 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM +QR+F++ LLH AASPAVWLNP RW + RA L VD HVW+L RL W Sbjct: 216 RADLDRMANQRQFVAALLHAAASPAVWLNPWRWYSVPRAVADALTVDRGDHVWDLLRLGW 275 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVP 614 L G P TMTVPIGEF S +G VV+W+ +AA RLFEAL +D PVP Sbjct: 276 GLHGSPTTMTVPIGEFTSGDAGSVVVWNHEAASRLFEALASDEPVP 321 >tr|A0PX19|A0PX19_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 409 Score = 336 bits (861), Expect = 7e-90 Identities = 164/291 (56%), Positives = 196/291 (67%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W+DT+L R P L Y +RP GRGT WL+VGSDSR+GLT EQQ Sbjct: 116 LWLDTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQQELTTGGDPGDGRTDT 175 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VH+ LGSSTP +VSIPRDSYV + GYG DKIN QTVE ATGLR+ Sbjct: 176 ILLVHLAGLGSSTPTALVSIPRDSYVPVRGYGRDKINAAFAIGGAPLLVQTVEQATGLRI 235 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGFGGFA LVDA+GGV +C EPI DPLAGIDL GCQ+LDGR+ALG+V Sbjct: 236 DHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATP 295 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRMI+QR+FMS LL RA +PAVWLNP RW + RAA L VD+ AHV++LARL W Sbjct: 296 RADLDRMINQRQFMSALLRRAENPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGW 355 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +L G P + VPIGEF + G VV+W+ DAA +F+AL +D P+P D + Sbjct: 356 ALHGHPTALAVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406 >tr|A0Q992|A0Q992_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator;[Mycobacterium avium] Length = 317 Score = 327 bits (838), Expect = 3e-87 Identities = 161/285 (56%), Positives = 190/285 (66%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W DT L R P LA YP RP GRG+ WL+VGSDSR+GL+ EQQ Sbjct: 22 WFDTKLHREPVLADYPGRPEPGRGSNWLIVGSDSRQGLSAEQQQQLATGGDIGDGRTDTI 81 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P +GS TMVSIPRDSYV IP +G+DKIN +TVE ATGLR+ Sbjct: 82 LLVHLPGVGSGVAPTMVSIPRDSYVPIPEHGKDKINAAFAMGGATLLVRTVEQATGLRIA 141 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGFA+LVDA+GGV VCP P+ DPLAG+DLPAGCQ LDGR AL +V Sbjct: 142 HYAEIGFGGFAALVDALGGVRVCPQAPMHDPLAGLDLPAGCQTLDGRNALAYVRSRDTPR 201 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDRM++QR+F++ LLHRAASPAVWLNP RW RA +L VD H W+LARL W+ Sbjct: 202 ADLDRMVNQRQFVAALLHRAASPAVWLNPWRWYAAPRAVADSLTVDRADHAWDLARLGWA 261 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVP 614 L G P T+TVPIGEF S +G VV+WD A RLF+AL +D +P Sbjct: 262 LHGSPATVTVPIGEFTSGDAGSVVVWDHARAARLFDALSSDGQLP 306 >tr|Q745J4|Q745J4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 401 Score = 323 bits (827), Expect = 6e-86 Identities = 159/285 (55%), Positives = 187/285 (65%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W DT L R P LA YP RP GRG+ WL+VGSDSR+GL+ EQQ Sbjct: 106 WFDTKLHREPVLADYPGRPEPGRGSNWLIVGSDSRQGLSAEQQQQLATGGDIGDGRTDTI 165 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P +GS TMVSIPRDSYV IP +G+DKIN +TVE ATGLR+ Sbjct: 166 LLVHLPGVGSGVAPTMVSIPRDSYVPIPEHGKDKINAAFAMGGATLLVRTVEQATGLRIA 225 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGF +LVDA+GGV VC P+ DPLAG+DLPAGCQ LDGR ALG+V Sbjct: 226 HYAEIGFGGFTALVDALGGVRVCSQAPMHDPLAGLDLPAGCQTLDGRNALGYVRSRDTPR 285 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDRM++QR+F++ LLHRAASP VWLNP RW RA L VD H W+LARL W+ Sbjct: 286 ADLDRMVNQRQFVAALLHRAASPTVWLNPWRWYAAPRAVADALTVDRADHAWDLARLGWA 345 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVP 614 L G P T+TVPIGEF S +G VV+WD A RLF+AL +D +P Sbjct: 346 LHGSPATVTVPIGEFTSGDAGSVVVWDHARAARLFDALSSDGQLP 390 >tr|B1MEG4|B1MEG4_MYCA9 Tax_Id=561007 SubName: Full=Possible transcriptional regulator;[Mycobacterium abscessus] Length = 313 Score = 313 bits (802), Expect = 5e-83 Identities = 152/290 (52%), Positives = 186/290 (64%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W+D L + AL YP+RPA G GT WLLVGSDSR+GLTP+Q+ Sbjct: 16 LWLDGRLHHVDALKDYPDRPATGSGTNWLLVGSDSRQGLTPDQETQLATGGDIGDGRTDT 75 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIPA ATMVS+PRDSYV IP G +K+N +TVE ATGLR+ Sbjct: 76 ILLVHIPAFYDGGAATMVSLPRDSYVSIPENGSNKLNAAYSLGGPALLTRTVEEATGLRI 135 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIGF GFAS+VDA+GGV++C EPI DPLAGIDL GCQ L+G +ALG+V Sbjct: 136 DHYAEIGFNGFASVVDAIGGVSMCLDEPIQDPLAGIDLTPGCQILNGPSALGYVRSRATP 195 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDRM HQR FMS L HR +SPAVW NP RW P+ + + + E H WNLA+L W Sbjct: 196 RADLDRMTHQRAFMSALFHRVSSPAVWANPFRWYPVATSTADAITLAEGDHSWNLAQLGW 255 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 +L G +T+PIG F N +GD+V WD DA+ RLF+ALRT +P D+L Sbjct: 256 ALAGSVQNLTMPIGSFSENWAGDIVTWDQDASSRLFDALRTGQQIPADLL 305 >tr|C1B901|C1B901_RHOOB Tax_Id=632772 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus opacus] Length = 406 Score = 300 bits (769), Expect = 3e-79 Identities = 155/290 (53%), Positives = 188/290 (64%), Gaps = 3/290 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 ++D+SL RI ALA YP R GT WLLVGSDSR GLTPEQ+ Sbjct: 115 YLDSSLNRIDALADYPGRIGDTPGTNWLLVGSDSRTGLTPEQEQQLSTGGNSGPDRTDTI 174 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P+ G PATMVSIPRDSYV IPGYGEDKIN QTVE A+GL +D Sbjct: 175 IVVHVPSGGG--PATMVSIPRDSYVSIPGYGEDKINASFAFGGPQLLTQTVEEASGLHID 232 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGFA +VDA+GGV +C I DPLAGI+L GCQEL G ALGFV Sbjct: 233 HYAEIGFGGFAGIVDAIGGVDMCLDTAIDDPLAGINLAPGCQELSGAQALGFVRSRATAL 292 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 D+DRM HQR FM+ L+ +A SPA WLNP R P++ +L VDE H+WNLA LAW+ Sbjct: 293 ADIDRMNHQRMFMAALMSKATSPATWLNPFRVWPLVTDTAASLRVDESDHIWNLAALAWA 352 Query: 570 LRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 +RGD VT TVP+G F +G+G+V++WD D A + F+AL D VP +++ Sbjct: 353 VRGDMVTTTVPVGGFEDVDGAGNVLLWDHDRASQFFDALANDRQVPAELV 402 >tr|C3JR11|C3JR11_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 341 Score = 298 bits (762), Expect = 2e-78 Identities = 156/290 (53%), Positives = 187/290 (64%), Gaps = 4/290 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 +VD+SL RI AL Y R A GT WL+VGSDSREGLTPEQ+ + Sbjct: 52 YVDSSLNRIDALPDYAGRVAGTPGTNWLIVGSDSREGLTPEQEQALATGGDTGPKRTDTV 111 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P G +T MVSIPRDSYV IPGYG DKIN QTVE ATGLR+D Sbjct: 112 ILVHVPKSGKTT---MVSIPRDSYVPIPGYGSDKINAAFAFGGAPLLVQTVEEATGLRID 168 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGF GFA +VDAVGGV VC A+PI DPLAGI+LPAGCQ+L G ALGFV Sbjct: 169 HYAEIGFSGFAGIVDAVGGVNVCLAQPIDDPLAGINLPAGCQDLKGSDALGFVRTRATAL 228 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDRM +QR+FMS LL +A SP +LNP R P++ +L VDE H+WNLA LAW+ Sbjct: 229 ADLDRMNNQRQFMSALLSKATSPTTFLNPFRLWPLVSDTAKSLQVDEGDHIWNLASLAWA 288 Query: 570 LRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 LRG T TVP+ F +GSG+V++WD A + F+AL D +P D++ Sbjct: 289 LRGGMTTTTVPVAGFEDVDGSGNVLLWDKARASQFFDALANDQQIPQDLI 338 >tr|Q0S9G0|Q0S9G0_RHOSR Tax_Id=101510 SubName: Full=Probable transcriptional regulator, LytR family protein;[Rhodococcus sp.] Length = 403 Score = 296 bits (758), Expect = 6e-78 Identities = 153/290 (52%), Positives = 188/290 (64%), Gaps = 3/290 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 ++D+SL RI ALA YP R GT WLLVGSDSR GLTPEQ+ Sbjct: 112 YLDSSLNRIDALADYPGRIDDTPGTNWLLVGSDSRTGLTPEQEQELSTGGNSGPDRTDTI 171 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P+ G PATMVSIPRDSYV IPGYGEDKIN QTVE A+GL +D Sbjct: 172 IVVHVPSGGG--PATMVSIPRDSYVSIPGYGEDKINASFAFGGPQLLTQTVEEASGLHID 229 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGFA +VDA+GGV +C I DPLAGI+L GCQEL G ALGFV Sbjct: 230 HYAEIGFGGFAGIVDAIGGVDMCLDTAIDDPLAGINLAPGCQELSGAQALGFVRSRATAL 289 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 D+DRM HQR FM+ L+ +A SPA WLNP R P++ +L VDE H+W+LA LAW+ Sbjct: 290 ADIDRMNHQRMFMAALMSKATSPATWLNPFRVWPLVTDTAASLRVDESDHIWHLAALAWA 349 Query: 570 LRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 +RGD VT TVP+G F +G+G+V++WD + A + F+AL D VP +++ Sbjct: 350 VRGDMVTTTVPVGGFEDVDGAGNVLLWDHERASQFFDALANDRQVPAELV 399 >tr|C0ZLR4|C0ZLR4_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 303 Score = 293 bits (749), Expect = 7e-77 Identities = 154/290 (53%), Positives = 186/290 (64%), Gaps = 4/290 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 +VD+SL RI AL Y R A GT WL+VGSDSREGLTPEQ+ + Sbjct: 14 YVDSSLNRIDALPDYAGRVADTPGTNWLIVGSDSREGLTPEQEQALATGGDTGPKRTDTV 73 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VH+P G +T MVSIPRDSYV IPGYG DKIN QTVE ATGLR+D Sbjct: 74 ILVHVPKSGKTT---MVSIPRDSYVPIPGYGSDKINAAFAFGGAPLLVQTVEEATGLRID 130 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGF GFA +VDAVGGV VC + I DPLAGI+LPAGCQ+L G ALGFV Sbjct: 131 HYAEIGFSGFAGIVDAVGGVNVCLTQAIDDPLAGINLPAGCQDLKGSDALGFVRTRATAL 190 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDRM +QR+FMS LL +A SP+ +LNP R P++ +L VDE H+WNLA LAW+ Sbjct: 191 ADLDRMNNQRQFMSALLSKATSPSTFLNPFRLWPLVSDTAKSLQVDEGDHIWNLASLAWA 250 Query: 570 LRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 LRG T TVP+ F +GSG+V++WD A + F+AL D +P D++ Sbjct: 251 LRGGMTTTTVPVAGFEDVDGSGNVLLWDKARASQFFDALANDQQIPQDLI 300 >tr|D5PVA3|D5PVA3_COREQ Tax_Id=525370 SubName: Full=Transcriptional regulator;[Rhodococcus equi ATCC 33707] Length = 307 Score = 277 bits (708), Expect = 4e-72 Identities = 154/295 (52%), Positives = 180/295 (61%), Gaps = 5/295 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +++DT L R+ ALA YP R A GT WLLVGSDSR GL+ E+ Sbjct: 15 VFLDTKLNRVDALADYPGRVADTPGTNWLLVGSDSRAGLSAEEDRQLAAGGDIEGKRTDT 74 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXX-QTVESATGLR 447 VHIP G++T MVSIPRDSYV IPG G KIN QTVE ATGL Sbjct: 75 IMLVHIPKSGATT---MVSIPRDSYVNIPGMGRGKINAAFSQDDGEQVLVQTVEEATGLH 131 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXX 507 +DHYAEIGFGGF+ +VDA+GGV +C PI DPLAGI+L GCQEL G ALGFV Sbjct: 132 IDHYAEIGFGGFSGIVDALGGVDMCVPYPIDDPLAGINLQEGCQELTGPEALGFVRSRAT 191 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 DLDRM +QR FMS LL +A SP +NPLR PMM +L V E H+WNLA LA Sbjct: 192 AMADLDRMNNQRAFMSALLKKATSPWTLVNPLRLWPMMTKTANSLQVAEGDHLWNLAGLA 251 Query: 568 WSLRGDPVTMTVPIGEFG-SNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENA 621 W+LRG VT TVP+G F +G GDV++WD + A FEAL D VPP +L A Sbjct: 252 WALRGKMVTTTVPVGGFDVVDGWGDVLLWDREKASEFFEALANDRQVPPSLLTGA 306 >tr|Q5Z3M0|Q5Z3M0_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 443 Score = 274 bits (700), Expect = 3e-71 Identities = 146/291 (50%), Positives = 178/291 (61%), Gaps = 4/291 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 I +D L RI ALAGY +R GT WLLVGSD R GLT EQ+ Sbjct: 154 IHLDGKLTRIDALAGYADRVGDTPGTNWLLVGSDGRGGLTAEQEQELATGGEVGPERTDT 213 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIP G +T +VS+PRDSYV IPG+G DK+N QTVE ATGLR+ Sbjct: 214 IMLVHIPRSGKTT---LVSLPRDSYVSIPGHGRDKLNASFALGGPQLLVQTVEIATGLRI 270 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYA+IGF GFA++VD +GG+ VC + I DPLAGIDLPAGCQELDG ALGFV Sbjct: 271 DHYAQIGFAGFANVVDTLGGIEVCLPQAIDDPLAGIDLPAGCQELDGPQALGFVRTRATA 330 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 D+DRM +QR FMS LL +A S + NP P+ +L VDE H+W+L RL W Sbjct: 331 LADIDRMNNQRLFMSALLEKATSASTLANPFTLWPLASDIARSLKVDEGDHLWDLGRLGW 390 Query: 569 SLRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 ++RGD V TVP+G F +GSG+VV+WD + A FEAL D +P D+L Sbjct: 391 AMRGDTVATTVPVGGFDDVSGSGNVVLWDKNRAGAFFEALADDRQIPDDLL 441 >tr|C4LLQ8|C4LLQ8_CORK4 Tax_Id=645127 (lytR1)SubName: Full=Putative transcriptional regulator, LytR family;[Corynebacterium kroppenstedtii] Length = 485 Score = 273 bits (697), Expect = 7e-71 Identities = 141/281 (50%), Positives = 176/281 (62%), Gaps = 4/281 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +WVD L R+ AL Y RP+ G GT WLLVGSDSR+GL+ +QQA Sbjct: 208 VWVDLRLHRVDALTNYGGRPSGGSGTNWLLVGSDSRDGLSEDQQAELSTGGDTGGGRTDS 267 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIP +G ATMVSIPRDSYV++PG+G+DK+N QTVE ATGLR+ Sbjct: 268 IILVHIPFVGK---ATMVSIPRDSYVDVPGHGKDKVNASYALGGPQLLQQTVEQATGLRI 324 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV-XXXXX 507 DHYAEIGFGGFA +VDAVGGV +C +P+ DPLAGI+L GCQ+LDG TALGFV Sbjct: 325 DHYAEIGFGGFAGVVDAVGGVKICVEQPMDDPLAGINLQPGCQKLDGPTALGFVRSRHSM 384 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 D+ R +QR F++ L+ +A SP +LNP R+ P + T + VD+ HVWNLARL Sbjct: 385 DDGDIGRARNQRTFLAALVKKALSPTTFLNPFRFFPFVSRMTDSFTVDKHDHVWNLARLG 444 Query: 568 WSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 L P T+PI + S GDV +WD D A LF++LR Sbjct: 445 IGLGMSPRNETIPIASYESTDVGDVDVWDDDGAQELFKSLR 485 >tr|Q8FLW3|Q8FLW3_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 417 Score = 265 bits (678), Expect = 1e-68 Identities = 145/281 (51%), Positives = 172/281 (61%), Gaps = 7/281 (2%) Query: 329 IWVDTSLQRIPALAGYPE-RPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXX 387 +W D+ L R+ A PE R + GT WLLVGSDSR+GL+ E A Sbjct: 143 LWADSQLNRVDAT---PETRVSNTAGTNWLLVGSDSRQGLSEEDIARLGTGGDIGVGRTD 199 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 +HIP G T ++SIPRDSYV IPG+G DKIN QTVE +TGLR Sbjct: 200 TIMVLHIPRSGEPT---LLSIPRDSYVNIPGWGMDKINAAFTVGGPELLAQTVEESTGLR 256 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXX 507 +DHYAEIG GG AS+VDAVGGV +CPAEPI DPLA +D+ AGCQE DG TALG+V Sbjct: 257 VDHYAEIGMGGLASMVDAVGGVEMCPAEPIQDPLANLDIQAGCQEFDGATALGYVRTRAT 316 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 DLDR++ QREF S LL+ A SP LNP R PM+ A GT V E HVW+LARLA Sbjct: 317 AMGDLDRVVRQREFFSSLLNTATSPGTLLNPFRVFPMIGDAVGTFTVGEGDHVWHLARLA 376 Query: 568 WSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++RG T TVPI F G+VV+WD AA LF +LR Sbjct: 377 LAMRGGTQTETVPIATFADYDVGNVVIWDDYAAEELFSSLR 417 >tr|C8NJE3|C8NJE3_COREF Tax_Id=196164 SubName: Full=Transcriptional regulator; Flags: Fragment;[Corynebacterium efficiens YS-314] Length = 361 Score = 265 bits (678), Expect = 1e-68 Identities = 145/281 (51%), Positives = 172/281 (61%), Gaps = 7/281 (2%) Query: 329 IWVDTSLQRIPALAGYPE-RPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXX 387 +W D+ L R+ A PE R + GT WLLVGSDSR+GL+ E A Sbjct: 87 LWADSQLNRVDAT---PETRVSNTAGTNWLLVGSDSRQGLSEEDIARLGTGGDIGVGRTD 143 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 +HIP G T ++SIPRDSYV IPG+G DKIN QTVE +TGLR Sbjct: 144 TIMVLHIPRSGEPT---LLSIPRDSYVNIPGWGMDKINAAFTVGGPELLAQTVEESTGLR 200 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXX 507 +DHYAEIG GG AS+VDAVGGV +CPAEPI DPLA +D+ AGCQE DG TALG+V Sbjct: 201 VDHYAEIGMGGLASMVDAVGGVEMCPAEPIQDPLANLDIQAGCQEFDGATALGYVRTRAT 260 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 DLDR++ QREF S LL+ A SP LNP R PM+ A GT V E HVW+LARLA Sbjct: 261 AMGDLDRVVRQREFFSSLLNTATSPGTLLNPFRVFPMIGDAVGTFTVGEGDHVWHLARLA 320 Query: 568 WSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++RG T TVPI F G+VV+WD AA LF +LR Sbjct: 321 LAMRGGTQTETVPIATFADYDVGNVVIWDDYAAEELFSSLR 361 >tr|D1ACP3|D1ACP3_THECD Tax_Id=471852 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermomonospora curvata] Length = 424 Score = 257 bits (657), Expect = 3e-66 Identities = 142/295 (48%), Positives = 179/295 (60%), Gaps = 10/295 (3%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 ++D+ LQR LA YP RPA GT WL+VGSDSREGLT EQ+ Sbjct: 134 YLDSKLQREAVLADYPGRPADTPGTNWLVVGSDSREGLTKEQRKEYATGNASGRRTDSMM 193 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 +H + G+ T++S+PRDSYVEIPG+G +K+N QTVE ATG+R+D Sbjct: 194 L-LHYGSGGT----TLLSLPRDSYVEIPGHGRNKLNAAFAFGGPKLLVQTVEKATGVRID 248 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGF +VDAVGGV +C +P+ DP AG+DL AGCQ LDG ALGFV Sbjct: 249 HYAEIGFGGFVGVVDAVGGVDICVEKPLKDPKAGLDLKAGCQTLDGGQALGFVRTRNFAN 308 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DL+R+ +QR+F + L+ +A SP V LNP R P+ + VDE H+ +L RL W+ Sbjct: 309 GDLERVENQRKFFAALMKKATSPGVMLNPFRGVPLALNSAANFTVDEGDHLVDLVRLMWA 368 Query: 570 LR----GDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 +R GD VT TVPI FGS G G V WD+ + LF ALR D PVP VL+ Sbjct: 369 MRGVSGGDGVTATVPISGFGSAPGVGSYVRWDTARSEALFAALREDKPVPDSVLD 423 >tr|C8NY97|C8NY97_9CORY Tax_Id=585529 SubName: Full=Transcriptional regulator;[Corynebacterium genitalium ATCC 33030] Length = 298 Score = 254 bits (650), Expect = 2e-65 Identities = 138/281 (49%), Positives = 168/281 (59%), Gaps = 7/281 (2%) Query: 329 IWVDTSLQRIPALAGYPERPAAGR-GTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXX 387 ++VDT L R+ A +P+ A GT WL+VGSDSR+GL+ E Sbjct: 24 LFVDTRLTRVDA---FPDNQVANTAGTNWLIVGSDSRQGLSDEDIERLGTGGDIGQGRTD 80 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 +H+PA G T +VS+PRDSYV IPGYG DKIN +TVE ATGLR Sbjct: 81 TIMLMHLPATGKPT---LVSLPRDSYVNIPGYGMDKINSAFAFGGPKLLTETVEQATGLR 137 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXX 507 +DHYAEIG GG A L DAVGGV +CP+EPI DPLA +D+ AGCQ++DG T+LG+V Sbjct: 138 IDHYAEIGMGGLAGLTDAVGGVELCPSEPIQDPLANLDVQAGCQKMDGPTSLGYVRTRAT 197 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 DLDR+ QREFMS L+ R SP V LNP R PM T L V E HVW+LAR+A Sbjct: 198 AMGDLDRVQRQREFMSALMKRVVSPGVLLNPFRLVPMALRGTDLLIVGEGDHVWHLARMA 257 Query: 568 WSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 LR T TVPIG+F + G V++WD A LF LR Sbjct: 258 LGLRSGVETETVPIGQFADSEVGSVLIWDEVGAQELFAKLR 298 >tr|Q8NLN8|Q8NLN8_CORGL Tax_Id=1718 SubName: Full=Transcriptional regulator;[Corynebacterium glutamicum] Length = 345 Score = 254 bits (649), Expect = 3e-65 Identities = 135/280 (48%), Positives = 165/280 (58%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D+ L R+ A + A GT WLLVGSDSR+GL+ E Sbjct: 71 LWADSKLNRVDATPA--TQVANTAGTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDT 128 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +H+P G T ++SIPRDSYV +PG+G DK N QTVE ATGLR+ Sbjct: 129 IMVLHMPRTGEPT---LLSIPRDSYVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRI 185 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VDAVGGV +CPAEP+ DPLA +D+ AGCQE DG ALG+V Sbjct: 186 DHYAEIGMGGLANMVDAVGGVEMCPAEPMYDPLANLDIQAGCQEFDGAAALGYVRTRATA 245 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR++ QREF S LL A SP LNP R PM+ A GT V E HVW+LARLA Sbjct: 246 LGDLDRVVRQREFFSALLSTATSPGTLLNPFRTFPMISNAVGTFTVGEGDHVWHLARLAL 305 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++RG VT TVPI F G+V +WD A LF ++R Sbjct: 306 AMRGGIVTETVPIASFADYDVGNVAIWDEAGAEALFSSMR 345 >tr|Q6M1W2|Q6M1W2_CORGL Tax_Id=1718 SubName: Full=Cell envelope-related transcriptional regulator;[Corynebacterium glutamicum] Length = 414 Score = 254 bits (649), Expect = 3e-65 Identities = 135/280 (48%), Positives = 165/280 (58%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D+ L R+ A + A GT WLLVGSDSR+GL+ E Sbjct: 140 LWADSKLNRVDATPA--TQVANTAGTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDT 197 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +H+P G T ++SIPRDSYV +PG+G DK N QTVE ATGLR+ Sbjct: 198 IMVLHMPRTGEPT---LLSIPRDSYVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRI 254 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VDAVGGV +CPAEP+ DPLA +D+ AGCQE DG ALG+V Sbjct: 255 DHYAEIGMGGLANMVDAVGGVEMCPAEPMYDPLANLDIQAGCQEFDGAAALGYVRTRATA 314 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR++ QREF S LL A SP LNP R PM+ A GT V E HVW+LARLA Sbjct: 315 LGDLDRVVRQREFFSALLSTATSPGTLLNPFRTFPMISNAVGTFTVGEGDHVWHLARLAL 374 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++RG VT TVPI F G+V +WD A LF ++R Sbjct: 375 AMRGGIVTETVPIASFADYDVGNVAIWDEAGAEALFSSMR 414 >tr|D5UQ22|D5UQ22_TSUPA Tax_Id=521096 SubName: Full=Cell envelope-related transcriptional attenuator;[Tsukamurella paurometabola DSM 20162] Length = 466 Score = 252 bits (643), Expect = 1e-64 Identities = 135/294 (45%), Positives = 163/294 (55%), Gaps = 4/294 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 + D L RI ALA Y R A GT WLLVGSD+REGLTPEQQ Sbjct: 175 YFDGKLTRIDALAAYAGRIADTPGTNWLLVGSDAREGLTPEQQKDLATGGDLGGARTDTI 234 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 VHIP GS ++SIPRD YV +PG G KIN QT ES +R+D Sbjct: 235 MLVHIPKSGSPL---LISIPRDLYVPVPGQGSYKINAAYFLGGPKLLVQTFESKAKVRVD 291 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIGFGGFA++VDA+GG+ +CP PI+DP AGI L AGCQ L G ALG+V Sbjct: 292 HYAEIGFGGFATMVDALGGIEMCPKYPINDPKAGIRLQAGCQNLSGAQALGYVRTRATPN 351 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDR++HQREFM+ L +A SP LNP + A G L VD D H+W+L RLAW+ Sbjct: 352 ADLDRVVHQREFMTALFTKATSPTTLLNPFEMWSLADATVGALTVDTDTHLWDLGRLAWA 411 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENAVN 623 L PVT T P G G+ ++W + F + D PVP +L N Sbjct: 412 LSSSPVTTTTPTGGSSDTDEGNALIWGKNTT-EFFSLIAADQPVPDRLLSGPGN 464 >tr|C2BIZ3|C2BIZ3_9CORY Tax_Id=525264 SubName: Full=Transcriptional regulator;[Corynebacterium pseudogenitalium ATCC 33035] Length = 412 Score = 249 bits (637), Expect = 7e-64 Identities = 137/280 (48%), Positives = 169/280 (60%), Gaps = 7/280 (2%) Query: 330 WVDTSLQRIPALAGYPERPAAGR-GTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 W D L R+ AL PE + GT WLLVGSDSR+GL+ EQQA Sbjct: 139 WADARLTRVEAL---PEDQVSNTAGTNWLLVGSDSRQGLSEEQQAELGTGGDVGEGRTDT 195 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP G A +VSIPRDSYVE+PG+G DKIN QTVE TGL + Sbjct: 196 IMLLHIPRTGK---AKLVSIPRDSYVEVPGFGMDKINAAFTYGGPQLLAQTVEGTTGLHI 252 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VD+VGGV VC EPI+DPLAGIDL GCQ+L GR ALG+V Sbjct: 253 DHYAEIGMGGLANVVDSVGGVDVCVKEPINDPLAGIDLQDGCQKLKGRDALGYVRTRATA 312 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF S LL + ASPA +NP R ++ + VDE HVW+LAR+A Sbjct: 313 MGDLDRVQRQREFFSALLDKVASPATLINPFRAFSLVNHTASSFIVDEGDHVWHLARVAL 372 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++ T TVPIG F G+VV+WD +AA L+++L+ Sbjct: 373 AMGSGVDTETVPIGGFQDTEVGNVVLWDDEAAAGLWDSLK 412 >tr|C5V8N8|C5V8N8_9CORY Tax_Id=553207 SubName: Full=Transcriptional regulator;[Corynebacterium matruchotii ATCC 14266] Length = 448 Score = 249 bits (636), Expect = 9e-64 Identities = 131/279 (46%), Positives = 166/279 (59%), Gaps = 5/279 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W+D+ L R+ A P+ AA GT WLLVGSDSR GL+ Sbjct: 175 WLDSRLNRVAA--DPPQHIAATSGTNWLLVGSDSRTGLSEADAQRLGTGGDIGSMRTDTI 232 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 +HIP G AT+VS+PRDSYV IPGYG DKIN QTVE ATGLR+ Sbjct: 233 MLLHIPLTGK---ATLVSLPRDSYVNIPGYGMDKINAAFTFGGPQLLTQTVEEATGLRIK 289 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIG GG A++VDAV G+ VCP EPI DPLA +D+ AGCQ++DG TALG+V Sbjct: 290 HYAEIGMGGLANVVDAVSGIEVCPKEPIQDPLAHLDIQAGCQKVDGPTALGYVRTRATAM 349 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDR+ QREF + L+ + +S NP R P + TG+ V E HVWNLAR+A + Sbjct: 350 GDLDRVQRQREFFAALVKKVSSAGTLANPFRLLPTITTVTGSFTVGEKDHVWNLARVALA 409 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 +R T TVP+G FG+ G VV+WD + + +LF +L+ Sbjct: 410 MRSGVTTETVPVGGFGNYDVGSVVLWDEEGSQQLFNSLK 448 >tr|C0E5U0|C0E5U0_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 285 Score = 249 bits (636), Expect = 9e-64 Identities = 131/279 (46%), Positives = 166/279 (59%), Gaps = 5/279 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W+D+ L R+ A P+ AA GT WLLVGSDSR GL+ Sbjct: 12 WLDSRLNRVAA--DPPQHIAATSGTNWLLVGSDSRTGLSEADAQRLGTGGDIGSMRTDTI 69 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 +HIP G AT+VS+PRDSYV IPGYG DKIN QTVE ATGLR+ Sbjct: 70 MLLHIPLTGK---ATLVSLPRDSYVNIPGYGMDKINAAFTFGGPQLLTQTVEEATGLRIK 126 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIG GG A++VDAV G+ VCP EPI DPLA +D+ AGCQ++DG TALG+V Sbjct: 127 HYAEIGMGGLANVVDAVSGIEVCPKEPIQDPLAHLDIQAGCQKVDGPTALGYVRTRATAM 186 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDR+ QREF + L+ + +S NP R P + TG+ V E HVWNLAR+A + Sbjct: 187 GDLDRVQRQREFFAALVKKVSSAGTLANPFRLLPTITTVTGSFTVGEKDHVWNLARVALA 246 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 +R T TVP+G FG+ G VV+WD + + +LF +L+ Sbjct: 247 MRSGVTTETVPVGGFGNYDVGSVVLWDEEGSQQLFNSLK 285 >tr|Q6NEM2|Q6NEM2_CORDI Tax_Id=1717 SubName: Full=Putative membrane protein;[Corynebacterium diphtheriae] Length = 431 Score = 248 bits (634), Expect = 1e-63 Identities = 131/280 (46%), Positives = 170/280 (60%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W+DT L R+ A P+ A GT WLLVGSDSR GL+ E Sbjct: 157 LWLDTRLNRVQAAP--PQHIAKTSGTNWLLVGSDSRAGLSEEDVQRLGTGGDIGSMRTDT 214 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP+ G AT++SIPRDSYVEIPGYG DKIN QTVE+ATGLR+ Sbjct: 215 IMVLHIPSSGK---ATLMSIPRDSYVEIPGYGMDKINASFTYGGAPLLTQTVENATGLRI 271 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 +HYAEIG GG A++VDAVGG+ VCPAEPI DPLAG+++ AGCQ++DG TALG+V Sbjct: 272 NHYAEIGMGGLANVVDAVGGIEVCPAEPIDDPLAGLNIAAGCQKVDGPTALGYVRTRHTA 331 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF + L+++ S + NP R P + G+ V + H W+LAR+A Sbjct: 332 LGDLDRVQRQREFFAALVNKVTSTSTLANPFRIMPTINTVAGSFTVGKKDHAWHLARVAL 391 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++R T+TVP F G+VV+WD A+ LF +LR Sbjct: 392 AMREGVETVTVPYAGFADYDVGNVVLWDEVASEELFASLR 431 >tr|C6R7F2|C6R7F2_9CORY Tax_Id=553206 SubName: Full=Transcriptional regulator;[Corynebacterium tuberculostearicum SK141] Length = 414 Score = 248 bits (632), Expect = 2e-63 Identities = 135/279 (48%), Positives = 168/279 (60%), Gaps = 5/279 (1%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 W D L R+ AL E+ + GT WLLVGSDSR+GL+ EQQA Sbjct: 141 WTDARLTRVEALP--QEQVSNTAGTNWLLVGSDSRQGLSEEQQAELGTGGDVGEGRTDTI 198 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 +HIP G A +VSIPRDSYVE+PG+G DKIN QTVE TGL +D Sbjct: 199 MLLHIPRTGK---AKLVSIPRDSYVEVPGFGMDKINAAFTYGGPQLLAQTVEGTTGLHID 255 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXXX 509 HYAEIG GG A++VD+VGGV VC EPI+DPLAGIDL GCQ+L GR ALG+V Sbjct: 256 HYAEIGMGGLANVVDSVGGVDVCVKEPINDPLAGIDLQDGCQKLKGRDALGYVRTRATAM 315 Query: 510 XDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWS 569 DLDR+ QREF S LL + ASPA +NP R ++ + V E HVW+LAR+A + Sbjct: 316 GDLDRVQRQREFFSALLDKVASPATLINPFRAFSLVNHTASSFIVGEGDHVWHLARVALA 375 Query: 570 LRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 + T TVPIG F G+VV+WD +AA L+++L+ Sbjct: 376 MGSGVDTETVPIGGFQDTEVGNVVLWDDEAAAGLWDSLK 414 >tr|C6WBH2|C6WBH2_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 336 Score = 246 bits (629), Expect = 6e-63 Identities = 137/292 (46%), Positives = 179/292 (61%), Gaps = 4/292 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 ++VDTSL R AL Y RPA GT WLLVGSD+R+ LT EQ+ Sbjct: 45 VYVDTSLSRSDALPDYEGRPADTPGTNWLLVGSDARDDLTDEQK-DDLATGDAAGRRTDT 103 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP S +T+VSIPRDSYV+IP G++K+N +TVE ATG+R+ Sbjct: 104 IMLLHIPE--GSGKSTLVSIPRDSYVDIPDNGKNKVNAAFAFGGGPLLARTVEGATGIRI 161 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHY E+GFGGFA++VDAVGGV +C EP+ DPLAG+DLPAGCQEL+G ALGFV Sbjct: 162 DHYMEVGFGGFANVVDAVGGVEMCLDEPLKDPLAGLDLPAGCQELEGSQALGFVRTRAFA 221 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DL R+ +QR F+S L +A S LNP R P++ AAT +++V + H+ +LA +A Sbjct: 222 TADLQRVQNQRAFLSALADKATSAGTLLNPFRSIPLVFAATDSVSVGDGDHLHHLAAMAL 281 Query: 569 SLRGDPVTMTVPIGEFGS-NGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619 + G +TVP+G + G G VV WD + A RLF AL D VP D+L+ Sbjct: 282 GMSGGVDNVTVPVGSTPTMPGVGSVVQWDRENALRLFGALEKDEAVPADLLQ 333 >tr|A4QHU8|A4QHU8_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 348 Score = 244 bits (624), Expect = 2e-62 Identities = 131/280 (46%), Positives = 160/280 (57%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D L R+ A + A GT WLLVGSDSR+GL+ E Sbjct: 74 LWADAKLNRVDATPA--TQVANTAGTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDT 131 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +H+P G T ++SIPRDSYV +PG+G DK N QTVE ATGLR+ Sbjct: 132 IMVLHMPRTGEPT---LLSIPRDSYVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRI 188 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VDAVGGV +CPAE + DPLA +D+ AGCQE DG ALG+V Sbjct: 189 DHYAEIGMGGLANMVDAVGGVEMCPAEAMYDPLANLDIQAGCQEFDGAAALGYVRTRATA 248 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR++ QREF S LL A SP LNP R PM+ A GT V E HVW+L RLA Sbjct: 249 LGDLDRVVRQREFFSALLSTATSPGTLLNPFRTFPMISNAVGTFTVGEGDHVWHLVRLAL 308 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++R T TVPI F G+V +WD A LF ++R Sbjct: 309 AMRSGIQTETVPIASFADYDVGNVAIWDEAGAEALFSSMR 348 >tr|C2CRD8|C2CRD8_CORST Tax_Id=525268 SubName: Full=Transcriptional regulator;[Corynebacterium striatum ATCC 6940] Length = 454 Score = 244 bits (623), Expect = 3e-62 Identities = 129/280 (46%), Positives = 170/280 (60%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D+ L RI A E+ A GT WLLVGSDSR+GLT E+QA Sbjct: 180 LWTDSRLTRIEAKPA--EQVAKTAGTNWLLVGSDSRQGLTEEEQAELGTGGDVGVGRTDT 237 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP+ G A ++SIPRDSYVE+PG+G DKIN +TVE +TGLR+ Sbjct: 238 IMLLHIPSSGK---AKLISIPRDSYVEVPGFGMDKINAAFTYGGPQLLTETVEQSTGLRI 294 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 +HYAEIG GG A++VD+VGGV +C EPI DPLAGI+L AGCQEL GR ALG+V Sbjct: 295 NHYAEIGMGGLANVVDSVGGVDICVKEPIDDPLAGINLQAGCQELRGRDALGYVRTRATA 354 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF + LL + SP +NP R ++ + V E HVW+LAR+A Sbjct: 355 MGDLDRVQRQREFFAALLDKITSPGTLINPFRTISLVNHTATSFVVGEKDHVWHLARVAL 414 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++ T TVPIG F G+VV+WD +A +L+++++ Sbjct: 415 AMASGVETETVPIGGFQDTTVGNVVLWDDEATQQLWDSMK 454 >tr|C0WG87|C0WG87_9CORY Tax_Id=525260 SubName: Full=Transcriptional regulator;[Corynebacterium accolens ATCC 49725] Length = 424 Score = 242 bits (617), Expect = 1e-61 Identities = 129/280 (46%), Positives = 169/280 (60%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W DT L R+ AL E+ A GT WLLVGSDSR+GL+ E Q + Sbjct: 150 LWADTRLTRVDALPD--EQVANTSGTNWLLVGSDSRQGLSEEDQQALGTGGDVGEGRTDT 207 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP G A +VSIPRDSYVE+PG+G DKIN QTVE TGL + Sbjct: 208 IMLLHIPRSGQ---AQLVSIPRDSYVEVPGFGMDKINAAFAYGGPKLLTQTVEGNTGLHI 264 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VD+VGGV +C AEPI+DPLAGIDL GCQ+L+G ALG+V Sbjct: 265 DHYAEIGMGGLANVVDSVGGVDICVAEPINDPLAGIDLQEGCQKLEGSDALGYVRTRATA 324 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF + LL + SPA +NP R ++ + V + HVW+LAR+A Sbjct: 325 MGDLDRVQRQREFFAALLDKITSPATLINPFRSISLINHTASSFIVGDGDHVWHLARVAL 384 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++ T TVPIG F G+VV+WD + A +L+++++ Sbjct: 385 AMGSGVDTETVPIGGFQDTVVGNVVLWDDEGAQQLWDSMK 424 >tr|C0XNM6|C0XNM6_9CORY Tax_Id=525263 SubName: Full=Transcriptional regulator;[Corynebacterium lipophiloflavum DSM 44291] Length = 283 Score = 241 bits (615), Expect = 2e-61 Identities = 131/280 (46%), Positives = 164/280 (58%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 ++ D L R+ AL ER A GT WLLVGSDSR+GL+ + A Sbjct: 9 LFTDARLNRVDALPD--ERIANTAGTNWLLVGSDSRQGLSEDDIARYGTGGDLGVGRTDT 66 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +H+P G PAT+VSIPRDSYV IPGYG DKIN TVE TGLR+ Sbjct: 67 VMLLHLPRTG---PATLVSIPRDSYVSIPGYGMDKINAAFAYGGPKLLATTVEQNTGLRV 123 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 D YAEIG GG A +VDA+GGV +C EPI DPLA + + GCQ++DG T LG+V Sbjct: 124 DRYAEIGMGGLAGVVDAIGGVEICVTEPIQDPLANLYVEPGCQKMDGPTGLGYVRTRATA 183 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF+S +++ SPAV LNP R P+M A G V+ HVWNLAR+ Sbjct: 184 LGDLDRVNRQREFLSAIVNEVTSPAVLLNPFRLIPLMWAVPGMFTVNTGDHVWNLARIPL 243 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++RG T TVP+G F G+V++WD A LF +LR Sbjct: 244 AMRGGLHTETVPLGGFMDTEVGNVMLWDEAGAEALFSSLR 283 >tr|C3PK90|C3PK90_CORA7 Tax_Id=548476 (lytR1)SubName: Full=Transcriptional regulator, LytR family;[Corynebacterium aurimucosum] Length = 479 Score = 241 bits (614), Expect = 3e-61 Identities = 132/280 (47%), Positives = 169/280 (60%), Gaps = 5/280 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W D+ L RI AL E+ A GT WLLVGSDSR+GLT EQQA Sbjct: 205 LWTDSRLTRIDALPN--EQVAQTSGTNWLLVGSDSRQGLTEEQQAELGTGGDVGVGRTDT 262 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP+ G A +VSIPRDSYV++PG+G DK+N QTVE ATGL + Sbjct: 263 IMLLHIPSSGK---AQLVSIPRDSYVDVPGFGIDKVNAAFTYGGPQLLTQTVEQATGLHI 319 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAEIG GG A++VD+VGGV +C EPI+DPLAGIDL AGCQ+L G ALG+V Sbjct: 320 DHYAEIGMGGLANVVDSVGGVEICVKEPINDPLAGIDLQAGCQKLRGPDALGYVRTRATA 379 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF + LL +A S + NP + ++ + V+E HVW+LAR+A Sbjct: 380 MGDLDRVERQREFFAALLDKATSFSTIGNPFKAVSLVNHTADSFIVNEKDHVWHLARVAL 439 Query: 569 SLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 S+ T TVPIG F G+VV+WD A L++++R Sbjct: 440 SMASGVETKTVPIGGFQDTVVGNVVLWDDAEAQALWDSMR 479 >tr|Q4JY39|Q4JY39_CORJK Tax_Id=306537 SubName: Full=Putative uncharacterized protein;[Corynebacterium jeikeium] Length = 447 Score = 237 bits (605), Expect = 3e-60 Identities = 130/282 (46%), Positives = 165/282 (58%), Gaps = 4/282 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQ-QASXXXXXXXXXXXXX 387 +W+DT LQR AL Y R GT WLLVGSDSR GL+ E Sbjct: 168 VWIDTKLQRTDALQDYDGRLGGTSGTNWLLVGSDSRAGLSKEDADRLMAGELNDSVGRTD 227 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 VHIP G ATM+S+PRDS+V+IPG G++K+N QTVE ATG+ Sbjct: 228 TIMVVHIPRFGGE--ATMLSLPRDSWVDIPGNGKNKLNQAFSIGGPALLQQTVEQATGIH 285 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV-XXXX 506 LDHYAEIGFGGFA++VDAVGGV +C EP+ DP+AGI+L AGCQELDG TALG+V Sbjct: 286 LDHYAEIGFGGFANVVDAVGGVEMCLDEPLEDPMAGINLQAGCQELDGPTALGYVRSRYT 345 Query: 507 XXXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARL 566 DLDR+ QR+F++ L + SP LNP + + A + + V+ED HVWNLA L Sbjct: 346 SAQGDLDRVERQRKFLAALSKKIKSPGTLLNPFKNLKVADALSANMTVNEDDHVWNLASL 405 Query: 567 AWSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++ G TVPI + +G+V +WD A +F LR Sbjct: 406 GLAMAGGAKQETVPIAGYEDTYAGNVALWDDAGAEEMFAKLR 447 >tr|C8RSW0|C8RSW0_CORJE Tax_Id=525262 SubName: Full=Transcriptional regulator;[Corynebacterium jeikeium ATCC 43734] Length = 292 Score = 237 bits (605), Expect = 3e-60 Identities = 130/282 (46%), Positives = 165/282 (58%), Gaps = 4/282 (1%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQ-QASXXXXXXXXXXXXX 387 +W+DT LQR AL Y R GT WLLVGSDSR GL+ E Sbjct: 13 VWIDTKLQRTDALQDYDGRLGGTSGTNWLLVGSDSRAGLSKEDADRLMAGELNDSVGRTD 72 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 VHIP G ATM+S+PRDS+V+IPG G++K+N QTVE ATG+ Sbjct: 73 TIMVVHIPRFGGE--ATMLSLPRDSWVDIPGNGKNKLNQAFSIGGPALLQQTVEQATGIH 130 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV-XXXX 506 LDHYAEIGFGGFA++VDAVGGV +C EP+ DP+AGI+L AGCQELDG TALG+V Sbjct: 131 LDHYAEIGFGGFANVVDAVGGVEMCLDEPLEDPMAGINLQAGCQELDGPTALGYVRSRYT 190 Query: 507 XXXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARL 566 DLDR+ QR+F++ L + SP LNP + + A + + V+ED HVWNLA L Sbjct: 191 SAQGDLDRVERQRKFLAALSKKIKSPGTLLNPFKNLKVADALSANMTVNEDDHVWNLASL 250 Query: 567 AWSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 ++ G TVPI + +G+V +WD A +F LR Sbjct: 251 GLAMAGGAKQETVPIAGYEDTYAGNVALWDDAGAEEMFAKLR 292 >tr|A4FG61|A4FG61_SACEN Tax_Id=405948 SubName: Full=Probable transcriptional regulator, LytR family;[Saccharopolyspora erythraea] Length = 384 Score = 237 bits (604), Expect = 4e-60 Identities = 135/297 (45%), Positives = 173/297 (58%), Gaps = 10/297 (3%) Query: 330 WVDTSLQRIPALAGYPERPAAGR-GTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 + D+ LQR AL YP R + GT WLLVGSDSREGL + Q Sbjct: 92 YFDSMLQRTDAL-DYPGRESKDTPGTNWLLVGSDSREGLD-DSQREELSAGNAPGRRTDS 149 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 +HIP G PA M+S+PRDS V IPG+G DK+N QT+E TG+ + Sbjct: 150 MMLIHIPESGGQ-PA-MISLPRDSSVPIPGHGRDKLNSAFSYGGPQLLAQTLEGVTGVHI 207 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV-XXXXX 507 DHYAEIGFGGFA LVDAVGGV VC +PI D +A IDLPAGCQELDG ALGFV Sbjct: 208 DHYAEIGFGGFADLVDAVGGVDVCLDQPIKDDMAHIDLPAGCQELDGPNALGFVRARYAL 267 Query: 508 XXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLA 567 D+ R +QR+ + L+ +A+SPA NP R P+ +A+ T V+ HVW+LA L Sbjct: 268 ADGDIGRAANQRKLLGALVDKASSPATLFNPFRLVPLASSASKTFTVNNGDHVWHLASLG 327 Query: 568 WSL----RGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLEN 620 ++ G VT +VP G FG V++WD + A +F+A+ D P+PP+VL+N Sbjct: 328 LAMGDLSGGQGVTTSVPFGGFGKVNGQSVILWDKERAAAMFDAIAKDQPIPPEVLDN 384 >tr|A4FD71|A4FD71_SACEN Tax_Id=405948 SubName: Full=Probable transcriptional regulator, LytR family;[Saccharopolyspora erythraea] Length = 343 Score = 237 bits (604), Expect = 4e-60 Identities = 134/298 (44%), Positives = 173/298 (58%), Gaps = 8/298 (2%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 ++VD SL+R AL ERP G GT WLLVGSDSRE L E++ Sbjct: 44 LYVDYSLKREQALPVDGERPQDGPGTNWLLVGSDSREDLDQERK-DELGTGDTAGRRTDT 102 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIP G TP TMVS+PRDS V+IPG G+DK+N +TVE+ TG+R+ Sbjct: 103 VMLVHIPESGG-TP-TMVSLPRDSLVKIPGQGKDKLNAAFAYGGSQLLARTVENNTGVRI 160 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAE+G GGFA + DA+GGV +C EP+ DP A +DL GCQ L G ALG+V Sbjct: 161 DHYAEVGLGGFADITDAIGGVDLCVKEPMQDPKANLDLQPGCQTLQGPQALGYVRTRATA 220 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF++ L + + P V NP R P++ + + VD HVW+L L Sbjct: 221 RGDLDRVQRQREFLAALTEKVSGPEVLANPFRLFPLILDTSQSFLVDSGDHVWHLGSLGL 280 Query: 569 SLR----GDPVTMTVPIGEFG-SNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENA 621 +++ G VT TVP G FG ++G VV WD + A +LF AL TD PVP +V+ A Sbjct: 281 AMQGIASGQGVTTTVPFGGFGETDGGASVVEWDDEGAEKLFGALATDTPVPQEVITTA 338 >tr|A4FN51|A4FN51_SACEN Tax_Id=405948 SubName: Full=Probable transcriptional regulator, LytR family;[Saccharopolyspora erythraea] Length = 343 Score = 236 bits (603), Expect = 6e-60 Identities = 134/298 (44%), Positives = 173/298 (58%), Gaps = 8/298 (2%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 ++VD SL+R AL ERP G GT WLLVGSDSRE L E++ Sbjct: 44 LYVDYSLKREQALPVDGERPQDGPGTNWLLVGSDSREDLDQERK-DELGTGDTAGRRTDT 102 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRL 448 VHIP G TP TMVS+PRDS V+IPG G+DK+N +TVE+ TG+R+ Sbjct: 103 VMLVHIPESGG-TP-TMVSLPRDSLVKIPGQGKDKLNAAFAYGGSQLLARTVENNTGVRI 160 Query: 449 DHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXXXXX 508 DHYAE+G GGFA + DA+GGV +C EP+ DP A +DL GCQ L G ALG+V Sbjct: 161 DHYAEVGLGGFADITDAIGGVDLCVKEPMQDPKANLDLRPGCQTLQGPQALGYVRTRATA 220 Query: 509 XXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAW 568 DLDR+ QREF++ L + + P V NP R P++ + + VD HVW+L L Sbjct: 221 RGDLDRVQRQREFLAALTEKVSGPEVLANPFRLFPLILDTSQSFLVDSGDHVWHLGSLGL 280 Query: 569 SLR----GDPVTMTVPIGEFG-SNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLENA 621 +++ G VT TVP G FG ++G VV WD + A +LF AL TD PVP +V+ A Sbjct: 281 AMQGIASGQGVTTTVPFGGFGETDGGASVVEWDDEGAEKLFGALATDTPVPQEVITTA 338 >tr|C7MT33|C7MT33_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related transcriptional attenuator;[Saccharomonospora viridis] Length = 307 Score = 234 bits (598), Expect = 2e-59 Identities = 138/296 (46%), Positives = 172/296 (58%), Gaps = 16/296 (5%) Query: 330 WVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXXX 389 ++D+S+ RI AL Y RPAAG GT WLLVGSDSREGL E+ A Sbjct: 19 YLDSSINRIDALPDYEGRPAAGEGTNWLLVGSDSREGLDEERMAELSTGDTGGKRTDTIM 78 Query: 390 XXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLRLD 449 HIP + TP T++S+PRDS VEIPG+G +KIN +TVE ATGLR+D Sbjct: 79 I-AHIP--DNDTPPTLLSLPRDSRVEIPGHGVNKINAAFSFGGAPLLVRTVEQATGLRID 135 Query: 450 HYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV---XXXX 506 HYAEIGFGGFA +VDA+GGV + E + D GI +PAG Q LDG ALGFV Sbjct: 136 HYAEIGFGGFAEVVDAIGGVEMDIPEEMRDTKTGIVIPAGTQILDGAQALGFVRMRYSEA 195 Query: 507 XXXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARL 566 DLDR+ +QR+F+ L ASPA LNP P++ A L +DED H+ +L L Sbjct: 196 TPRSDLDRVANQRKFIGALASEIASPATLLNPFDVFPLLGAVPDALTLDEDDHLHHLVAL 255 Query: 567 AWSLR----GDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVL 618 AW++R G VT TVP+ S WD + LFEALRTD+P+P +VL Sbjct: 256 AWAMRGIGGGGVVTTTVPV------TSASAENWDPAKSEALFEALRTDSPIPEEVL 305 >tr|B1VE97|B1VE97_CORU7 Tax_Id=504474 (lytR1)SubName: Full=Putative transcriptional regulator (LytR family);[Corynebacterium urealyticum] Length = 508 Score = 232 bits (591), Expect = 1e-58 Identities = 128/282 (45%), Positives = 162/282 (57%), Gaps = 6/282 (2%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQ-QASXXXXXXXXXXXXX 387 +W D+ LQR AL Y R GT WLLVGSDSR GL E Sbjct: 231 LWADSQLQRTEALQNYEGRVGGTAGTNWLLVGSDSRAGLDQETADRLSAGMLDESEGRTD 290 Query: 388 XXXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXXQTVESATGLR 447 VH+P +G ATM+S+PRDS+V IPGYGE+KIN +TVE ATGLR Sbjct: 291 SIILVHLPLVGK---ATMISLPRDSFVNIPGYGENKINAAFALGGPALLQRTVEEATGLR 347 Query: 448 LDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFV-XXXX 506 +DHYAE+GFGGFA+ VD VGGV +C EP+ DP+AGI+LPAGCQ+LDG ALG+V Sbjct: 348 IDHYAEVGFGGFANAVDGVGGVEMCLEEPLEDPMAGINLPAGCQKLDGPNALGYVRSRYT 407 Query: 507 XXXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARL 566 DLDR QR+ ++ L + SP NP R P + +L VD+ H+W+LARL Sbjct: 408 SAGGDLDRAGRQRQLLAALSKKMLSPGTLFNPFRLFPTVGGVAKSLTVDKGDHMWHLARL 467 Query: 567 AWSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALR 608 +RG + VP N +G V++WD AA +LF +LR Sbjct: 468 GVKMRGAKQEV-VPTSGSADNYAGSVLLWDQAAAEQLFSSLR 508 >tr|Q47LS2|Q47LS2_THEFY Tax_Id=269800 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermobifida fusca] Length = 404 Score = 228 bits (582), Expect = 2e-57 Identities = 123/295 (41%), Positives = 171/295 (57%), Gaps = 7/295 (2%) Query: 329 IWVDTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASXXXXXXXXXXXXXX 388 +W ++ L R+ AL Y RP GTT+L+VGSDSREGL+ E + Sbjct: 114 LWANSRLNRVAALVPYEGRPDDQPGTTYLIVGSDSREGLSDEDMEALRTGKAEGKRTDTI 173 Query: 389 XXXVHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINXXXXXXXXXXXX---QTVESATG 445 +++P G PA ++S+PRDSYVEIPG G +KIN +T E A+G Sbjct: 174 MV-LYVPTEGR--PA-IISVPRDSYVEIPGIGANKINAAYAEALGGGPATLVRTFEQASG 229 Query: 446 LRLDHYAEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVXXX 505 +R+DHY EIGF GF +VDAVGGV +CP E + DP AG+D+ AGCQ +DG TALG+V Sbjct: 230 VRIDHYVEIGFAGFVDIVDAVGGVELCPEEAMEDPKAGLDIEAGCQVMDGPTALGYVRTR 289 Query: 506 XXXXXDLDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLAR 565 DLDR+ QREF S L+ +A +P+ NP R P++ + T T +VDE + +LA Sbjct: 290 ATPRADLDRIQRQREFFSALIQQATAPSTLFNPFRSIPLVLSGTSTFSVDEGDSLMDLAW 349 Query: 566 LAWSLRGDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLEN 620 LA ++R P T VP+G + G VV+WD A +F A+R P+P +++ Sbjct: 350 LALAMRDSPATTAVPVGSTPTLDVGSVVLWDEARAEEMFAAMREGRPIPESAMQD 404 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.318 0.136 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,243,549,731 Number of extensions: 111441534 Number of successful extensions: 209882 Number of sequences better than 10.0: 2655 Number of HSP's gapped: 207663 Number of HSP's successfully gapped: 2665 Length of query: 623 Length of database: 4,236,830,644 Length adjustment: 144 Effective length of query: 479 Effective length of database: 2,435,698,228 Effective search space: 1166699451212 Effective search space used: 1166699451212 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 84 (37.0 bits)