BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6643 (472 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|A0R6R5|A0R6R5_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding p... 914 0.0 tr|B2HFJ2|B2HFJ2_MYCMM Tax_Id=216594 SubName: Full=Transcription... 707 0.0 tr|A0PR73|A0PR73_MYCUA Tax_Id=362242 SubName: Full=Transcription... 707 0.0 tr|A0Q9P6|A0Q9P6_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 698 0.0 tr|Q744P3|Q744P3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 694 0.0 tr|D5YDW7|D5YDW7_MYCTU Tax_Id=520140 SubName: Full=Transcription... 605 e-171 tr|Q7U0L0|Q7U0L0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 605 e-171 tr|O06581|O06581_MYCTU Tax_Id=1773 SubName: Full=DNA-binding pro... 605 e-171 tr|C6DV31|C6DV31_MYCTK Tax_Id=478434 SubName: Full=Transcription... 605 e-171 tr|C1AMC4|C1AMC4_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 605 e-171 tr|A5WLF6|A5WLF6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 605 e-171 tr|A5U1H6|A5U1H6_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 605 e-171 tr|A1KHS0|A1KHS0_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 605 e-171 tr|D6G0A9|D6G0A9_MYCTU Tax_Id=478435 SubName: Full=Transcription... 605 e-171 tr|D6FQH7|D6FQH7_MYCTU Tax_Id=611304 SubName: Full=Transcription... 605 e-171 tr|D6FFX0|D6FFX0_MYCTU Tax_Id=611303 SubName: Full=Transcription... 605 e-171 tr|D6F377|D6F377_MYCTU Tax_Id=611302 SubName: Full=Transcription... 605 e-171 tr|D5ZEM7|D5ZEM7_MYCTU Tax_Id=537210 SubName: Full=Transcription... 605 e-171 tr|D5Z226|D5Z226_MYCTU Tax_Id=537209 SubName: Full=Transcription... 605 e-171 tr|D5YQA7|D5YQA7_MYCTU Tax_Id=515616 SubName: Full=Transcription... 605 e-171 tr|D5Y2B1|D5Y2B1_MYCTU Tax_Id=520141 SubName: Full=Transcription... 605 e-171 tr|D5XS91|D5XS91_MYCTU Tax_Id=515617 SubName: Full=Transcription... 605 e-171 tr|A4KG58|A4KG58_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 605 e-171 tr|A2VH41|A2VH41_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 605 e-171 tr|B1ML40|B1ML40_MYCA9 Tax_Id=561007 SubName: Full=Probable tran... 579 e-163 tr|D0L8Q4|D0L8Q4_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 564 e-159 tr|C0ZQH2|C0ZQH2_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre ... 539 e-151 tr|Q5YRZ9|Q5YRZ9_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-b... 535 e-150 tr|C3JF42|C3JF42_RHOER Tax_Id=596309 SubName: Full=DNA-binding p... 534 e-150 tr|D5PY22|D5PY22_COREQ Tax_Id=525370 SubName: Full=DNA-binding p... 533 e-149 tr|C1B6J2|C1B6J2_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 512 e-143 tr|Q2RRX9|Q2RRX9_RHORT Tax_Id=269796 SubName: Full=Transcription... 486 e-135 tr|A5VFR3|A5VFR3_SPHWW Tax_Id=392499 SubName: Full=Transcription... 481 e-133 tr|Q1N883|Q1N883_9SPHN Tax_Id=314266 SubName: Full=Transcription... 469 e-130 tr|C9CWQ0|C9CWQ0_9RHOB Tax_Id=644076 SubName: Full=DNA-binding p... 469 e-130 tr|B6IXX7|B6IXX7_RHOCS Tax_Id=414684 SubName: Full=Putative unch... 467 e-129 tr|C6QII4|C6QII4_9RHIZ Tax_Id=582899 SubName: Full=Transcription... 465 e-129 tr|A1WR95|A1WR95_VEREI Tax_Id=391735 SubName: Full=Transcription... 459 e-127 tr|D2LF72|D2LF72_RHOVA Tax_Id=648757 SubName: Full=Transcription... 458 e-127 tr|C7MW49|C7MW49_SACVD Tax_Id=471857 SubName: Full=Predicted tra... 451 e-125 tr|B3QGB8|B3QGB8_RHOPT Tax_Id=395960 SubName: Full=Transcription... 446 e-123 tr|A1B1R0|A1B1R0_PARDP Tax_Id=318586 SubName: Full=Transcription... 443 e-122 tr|D5AS47|D5AS47_RHOCB Tax_Id=272942 SubName: Full=Transcription... 440 e-121 tr|A1W6F4|A1W6F4_ACISJ Tax_Id=232721 SubName: Full=Transcription... 440 e-121 tr|Q07LS5|Q07LS5_RHOP5 Tax_Id=316055 SubName: Full=Transcription... 439 e-121 >tr|A0R6R5|A0R6R5_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding protein;[Mycobacterium smegmatis] Length = 472 Score = 914 bits (2361), Expect = 0.0 Identities = 460/472 (97%), Positives = 460/472 (97%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP Sbjct: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA Sbjct: 61 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 Query: 121 MHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAE 180 MHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAE Sbjct: 121 MHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAE 180 Query: 181 LLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAEL 240 LLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAEL Sbjct: 181 LLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAEL 240 Query: 241 IAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEVGF 300 IAELVADADDLSTEAREVARI PYRMFLAAAEELRYDIDRLARRFEVGF Sbjct: 241 IAELVADADDLSTEAREVARIGLANYYAGALLLPYRMFLAAAEELRYDIDRLARRFEVGF 300 Query: 301 ETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQ 360 ETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQ Sbjct: 301 ETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQ 360 Query: 361 PGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDL 420 PGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDL Sbjct: 361 PGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDL 420 Query: 421 ADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVNDPR 472 ADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVNDPR Sbjct: 421 ADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVNDPR 472 >tr|B2HFJ2|B2HFJ2_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 473 Score = 707 bits (1826), Expect = 0.0 Identities = 346/466 (74%), Positives = 391/466 (83%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M KTF G RLRRLRE+HGLTQVALARALGLSTSY+NQLENDQRP+TV VLL+L+ERFDLP Sbjct: 1 MPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 THYF PDSDARLVSDLR++ + AT AQIEELVARMPAVGQTLV LHRRL+DAT ELEA Sbjct: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 Query: 121 MHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAE 180 +H+RA+AD QPMPFEEVRDFFYDRKN++ ELD AAE +F R GLR+GGLDAQLA Sbjct: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 Query: 181 LLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAEL 240 LL D LG VV+DDGQ L+ N KR+++P+ TLY+ARWL+ GQRAFQ+ATQ ALLTQA+L Sbjct: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 Query: 241 IAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEVGF 300 I ++A D LS EAR VARI PYR FL AA RYDID+LARRFEVGF Sbjct: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 Query: 301 ETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQ 360 ET+CHRLSTLQRP+ARGVPFIFVRTD+AGNISKRQSATAFHFSRVGGNCPLWV+HQAFA+ Sbjct: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 Query: 361 PGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDL 420 PG+F+TQVAQMPD R+YFWIARTT S YLGP KSFAIGLGCDLAHA +LIYS G+DL Sbjct: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 Query: 421 ADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 D A IGAGCK+C+RP+CPQRAFPY+GRPV+VDPH S+DLPYP Sbjct: 421 TDTEAIAAIGAGCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 >tr|A0PR73|A0PR73_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 483 Score = 707 bits (1826), Expect = 0.0 Identities = 346/464 (74%), Positives = 390/464 (84%) Query: 3 KTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTH 62 KTF G RLRRLRE+HGLTQVALARALGLSTSY+NQLENDQRP+TV VLL+L+ERFDLPTH Sbjct: 13 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 72 Query: 63 YFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEAMH 122 YF PDSDARLVSDLR++ + AT AQIEELVARMPAVGQTLV LHRRL+DAT ELEA+H Sbjct: 73 YFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEALH 132 Query: 123 TRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAELL 182 +RA+AD QPMPFEEVRDFFYDRKN++ ELD AAE +F R GL +GGLDAQLA LL Sbjct: 133 SRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEQMFGRHGLHLGGLDAQLARLL 192 Query: 183 SDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAELIA 242 D LGI VV+DDGQ L+ N KR+++P+ TLY+ARWL+ GQRAFQ+ATQ ALLTQA+LI Sbjct: 193 GDNLGITVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADLIT 252 Query: 243 ELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEVGFET 302 ++A D LS EAR VARI PYR FL AA RYDID+LARRFEVGFET Sbjct: 253 GIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGFET 312 Query: 303 VCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQPG 362 +CHRLSTLQRP+ARGVPFIFVRTD+AGNISKRQSATAFHFSRVGGNCPLWV+HQAFA+PG Sbjct: 313 ICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFARPG 372 Query: 363 QFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDLAD 422 QF+TQVAQMPD R+YFWIARTT S YLGP KSFAIGLGCDLAHA +LIYS G+DL D Sbjct: 373 QFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDLTD 432 Query: 423 EAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 A IGAGCK+C+RP+CPQRAFPY+GRPV+VDPH S+DLPYP Sbjct: 433 TEAIAAIGAGCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 476 >tr|A0Q9P6|A0Q9P6_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium avium] Length = 474 Score = 698 bits (1802), Expect = 0.0 Identities = 341/474 (71%), Positives = 394/474 (83%), Gaps = 3/474 (0%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 MAKTF G RLRRLREE GLTQVALAR LGLSTSY+NQLENDQRP+TVPVLL+L+ERFDLP Sbjct: 1 MAKTFAGARLRRLREEQGLTQVALARVLGLSTSYVNQLENDQRPITVPVLLTLTERFDLP 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 T YF PDSDARL++DLR++L ++ AT Q+EELVARMPA+GQTLV LHRRL D T +LEA Sbjct: 61 TQYFAPDSDARLIADLREVLAETPATPGQVEELVARMPAIGQTLVNLHRRLHDTTADLEA 120 Query: 121 MHTRAS---ADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 +++RA+ +D P QPMPFEEVRDFFYDRKN++ ELD AAE +FD LRIGGLD Q Sbjct: 121 LYSRANLDISDTPGLPHQPMPFEEVRDFFYDRKNYIGELDVAAEEMFDHNRLRIGGLDGQ 180 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LA+LL ++LG+ VVIDDGQ+L+ N KR++ P+ T+Y+ARWLHPGQRAFQ+ATQ ALLTQ Sbjct: 181 LAQLLGEQLGVAVVIDDGQLLAPNSKRLFDPESKTVYLARWLHPGQRAFQLATQIALLTQ 240 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ELI ++A D LS +AR VARI PYR FL AAE +RYDID+L+RRFE Sbjct: 241 PELITAIIAGDDQLSDDARGVARIGLANYFAGALLLPYRRFLDAAERVRYDIDQLSRRFE 300 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP+ARGVPFIFVRTD+AGNISKRQSATAFHFSRVGGNCPLWVVH A Sbjct: 301 VGFETVCHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVVHHA 360 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 F++PGQF+TQVAQMPD R+YFWIARTT+ S YLGP KSFAIGLGCD+ HA +LIYS G Sbjct: 361 FSRPGQFLTQVAQMPDDRTYFWIARTTSGGPSRYLGPHKSFAIGLGCDVDHADKLIYSVG 420 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVNDP 471 IDL D + VPIGAGCK+C+RPACPQRAFPY+GRPV VDPH S+DLPYP P Sbjct: 421 IDLRDTESIVPIGAGCKICDRPACPQRAFPYLGRPVSVDPHRSTDLPYPPAITP 474 >tr|Q744P3|Q744P3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 502 Score = 694 bits (1792), Expect = 0.0 Identities = 340/474 (71%), Positives = 393/474 (82%), Gaps = 3/474 (0%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 +AKTF G RLRRLREE GLTQVALARALGLSTSY+NQLENDQRP+TVPVLL+L+ERFDLP Sbjct: 29 VAKTFAGARLRRLREEQGLTQVALARALGLSTSYVNQLENDQRPITVPVLLTLTERFDLP 88 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 T YF PDSDARL++DLR++L ++ AT Q+EELVARMPA+GQTLV LHRRL D T +LEA Sbjct: 89 TQYFAPDSDARLIADLREVLAETPATPGQVEELVARMPAIGQTLVNLHRRLHDTTADLEA 148 Query: 121 MHTRAS---ADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 +++RA+ +D P QPMPFEEVRDFFYDRKN++ ELD AAE +FD LRIGGLD Q Sbjct: 149 LYSRANLDISDTPGLPHQPMPFEEVRDFFYDRKNYIGELDVAAEEMFDHNRLRIGGLDGQ 208 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LA LL ++LG+ VVIDDGQ+L+ N KR++ P+ T+Y+ARWLHPGQRAFQ+ATQ ALLTQ Sbjct: 209 LARLLGEQLGVAVVIDDGQLLAPNSKRLFDPESKTVYLARWLHPGQRAFQLATQIALLTQ 268 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ELI ++A D LS +AR VARI PYR FL AAE +RYDID+L+RRFE Sbjct: 269 PELITAIIAGDDQLSDDARGVARIGLANYFAGALLLPYRRFLDAAERVRYDIDQLSRRFE 328 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP+ARGVPFIFVRTD+AGNISKRQSATAFHFSRVGGNCPLWVVH A Sbjct: 329 VGFETVCHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVVHHA 388 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 F++PGQF+TQVAQMPD R+YFWIARTT+ S YLGP KSFAIGLGCD+ HA +LIYS G Sbjct: 389 FSRPGQFLTQVAQMPDDRTYFWIARTTSGGPSRYLGPHKSFAIGLGCDVDHADKLIYSVG 448 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVNDP 471 IDL D + VPIGAGCK+C+R ACPQRAFPY+GRPV VDPH S+DLPYP P Sbjct: 449 IDLRDTESIVPIGAGCKICDRAACPQRAFPYLGRPVSVDPHRSTDLPYPPAITP 502 >tr|D5YDW7|D5YDW7_MYCTU Tax_Id=520140 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis EAS054] Length = 486 Score = 605 bits (1561), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARSVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|Q7U0L0|Q7U0L0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATOR PROTEIN;[Mycobacterium bovis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|O06581|O06581_MYCTU Tax_Id=1773 SubName: Full=DNA-binding protein, putative; SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATOR PROTEIN;[Mycobacterium tuberculosis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|C6DV31|C6DV31_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|C1AMC4|C1AMC4_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulator protein;[Mycobacterium bovis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A5WLF6|A5WLF6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A5U1H6|A5U1H6_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulator protein;[Mycobacterium tuberculosis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A1KHS0|A1KHS0_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulator protein;[Mycobacterium bovis] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D6G0A9|D6G0A9_MYCTU Tax_Id=478435 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis KZN 605] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D6FQH7|D6FQH7_MYCTU Tax_Id=611304 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis K85] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D6FFX0|D6FFX0_MYCTU Tax_Id=611303 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis CPHL_A] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D6F377|D6F377_MYCTU Tax_Id=611302 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T46] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D5ZEM7|D5ZEM7_MYCTU Tax_Id=537210 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T17] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D5Z226|D5Z226_MYCTU Tax_Id=537209 SubName: Full=Transcriptional regulatory protein;[Mycobacterium tuberculosis GM 1503] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D5YQA7|D5YQA7_MYCTU Tax_Id=515616 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis 02_1987] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D5Y2B1|D5Y2B1_MYCTU Tax_Id=520141 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T85] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|D5XS91|D5XS91_MYCTU Tax_Id=515617 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis T92] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A4KG58|A4KG58_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulator protein;[Mycobacterium tuberculosis str. Haarlem] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A2VH41|A2VH41_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 486 Score = 605 bits (1559), Expect = e-171 Identities = 309/468 (66%), Positives = 355/468 (75%), Gaps = 6/468 (1%) Query: 2 AKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPT 61 ++TF G RLRRLR+E GLTQVALA+AL LSTSY+NQLENDQRP+TVPVLL L+ERFDL Sbjct: 14 SRTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSA 73 Query: 62 HYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTE 117 YF+ DSDARLV+DL D+ D A + AQIEE VARMP VG +LV +HRRL AT E Sbjct: 74 QYFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEE 133 Query: 118 LEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQ 177 LE +RA+A+ +P +PMPFEEVRDFFYDR N++ +LD AAE +F G+R GGLD Q Sbjct: 134 LEGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQ 193 Query: 178 LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LAEL+ D GI+VVIDD L KR Y PD L VA WL PGQRAFQIATQ AL+ Q Sbjct: 194 LAELMRDRFGISVVIDDN--LPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQ 251 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 ++LI+ +VA D LSTEAR VARI PYR F AAE+LRYDID L RRF Sbjct: 252 SDLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFG 311 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 312 VGFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDA 371 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FAQP + V QVAQMPDGRSYFW+A+TTA YLGP K+FA+GLGCDLAHAH+L+YS G Sbjct: 372 FAQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTG 431 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 + L D + VPIGAGCK+C R +C QRAFPY+G V VD +A S LPY Sbjct: 432 VVLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|B1ML40|B1ML40_MYCA9 Tax_Id=561007 SubName: Full=Probable transcriptional regulator protein;[Mycobacterium abscessus] Length = 473 Score = 579 bits (1493), Expect = e-163 Identities = 300/473 (63%), Positives = 350/473 (73%), Gaps = 9/473 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M++ F G RLRRLREE GLTQ ALAR L LSTSY+NQLEND RPVTV VLL L+ERFDL Sbjct: 1 MSRPFAGARLRRLREERGLTQAALARVLDLSTSYVNQLENDTRPVTVAVLLRLTERFDLS 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQA---QIEELVARMPAVGQTLVTLHRRLFDATTE 117 HYF+PDSDARLV+DL +I ++A + Q+EELVARMP+VGQTLV +HRRL D T E Sbjct: 61 PHYFSPDSDARLVADLGEIFTEAAVGEVSDLQLEELVARMPSVGQTLVGMHRRLRDVTAE 120 Query: 118 LEAMHTRASADA-----PVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIG 172 LE+ +A+ PL+ PMPFEEVRDFFYD KN++ ELD AAE +F+ GL +G Sbjct: 121 LESYRATENAETIGDSVREPLR-PMPFEEVRDFFYDHKNYLGELDTAAEDLFEHYGLHVG 179 Query: 173 GLDAQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQY 232 GLD QLA +L +LGI V ++ S + KR + L +A WL PGQRAFQ+ATQ Sbjct: 180 GLDIQLATVLKQDLGIAVAVNKAGEPSDSSKRRFDATAGVLRIAHWLTPGQRAFQMATQL 239 Query: 233 ALLTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRL 292 AL+TQ E +A ++A AD LS EA VARI PY+ F AAE RYD+D L Sbjct: 240 ALVTQTETMAAILAGADQLSPEAIGVARIGLANYFAGAFLLPYKQFHHAAESSRYDVDIL 299 Query: 293 ARRFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLW 352 AR+FEVG ETVCHRLSTLQRP RGVPFI VRTD AGNISKRQSATAFHFSRVGGNCPLW Sbjct: 300 ARQFEVGHETVCHRLSTLQRPSMRGVPFILVRTDRAGNISKRQSATAFHFSRVGGNCPLW 359 Query: 353 VVHQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRL 412 VVH+AF+ PGQFVTQVA+MPDGR+YFW+ART++ S +L KSFAIGLGCD+AHAHRL Sbjct: 360 VVHEAFSNPGQFVTQVAEMPDGRTYFWVARTSSTSTGGFLSTPKSFAIGLGCDIAHAHRL 419 Query: 413 IYSAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 +YS GI + D + AVPIG GCKVC R +C QRAFPYIGR V VD ASS LPY Sbjct: 420 VYSTGIAIDDPSTAVPIGPGCKVCVRESCAQRAFPYIGRSVHVDEDASSGLPY 472 >tr|D0L8Q4|D0L8Q4_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 474 Score = 564 bits (1454), Expect = e-159 Identities = 290/468 (61%), Positives = 346/468 (73%), Gaps = 9/468 (1%) Query: 5 FIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTHYF 64 FIG RLRRLR+E GL+Q LAR + LSTSY+NQLENDQRP+TVPVLL+L+ FDL YF Sbjct: 2 FIGARLRRLRDERGLSQAGLARRVELSTSYVNQLENDQRPITVPVLLTLTREFDLDADYF 61 Query: 65 TPDSDARLVSDLRDILV----DSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEA 120 PD DARLV+DL D+L T+A+I ELVARMPAVG+TLV +HRRL A TELE+ Sbjct: 62 APDGDARLVADLADVLTAQPDSGEVTRAEITELVARMPAVGRTLVGMHRRLIAADTELES 121 Query: 121 MHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAE 180 R S+ VP PMPFEEVRDFFYDRKN++ LD+AAE +FDR LRIGGLD QLA+ Sbjct: 122 HRARISSGG-VPATTPMPFEEVRDFFYDRKNYIDSLDEAAETLFDRHRLRIGGLDLQLAD 180 Query: 181 LLSDELGINVVID---DGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQ 237 LL++E GI+V ID D + + + KR + +H +++A L GQRAFQ+ATQ ALLTQ Sbjct: 181 LLAEEFGISVSIDHHADPRDAARSPKRRFDEEHGVIHLAGRLTSGQRAFQLATQLALLTQ 240 Query: 238 AELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFE 297 A +I LV +AD+L + +ARI PY FL AAE +RYD++ L F Sbjct: 241 AAIIDALVTEADNLHPSSVPLARIGLANYFAGALLLPYERFLRAAETVRYDVELLGLTFG 300 Query: 298 VGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQA 357 VGFETVCHRLSTLQRP RG+PFI VRTD AGNISKRQSATAFHFSRVGG+CPLWVVH A Sbjct: 301 VGFETVCHRLSTLQRPRNRGIPFILVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHDA 360 Query: 358 FAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAG 417 FA PG+ VTQV+QMPDGRSYFW+ARTT +L P KSFAIGLGCD+AHA RLIY++G Sbjct: 361 FATPGRIVTQVSQMPDGRSYFWLARTT-DDHHGFLSPRKSFAIGLGCDVAHAQRLIYASG 419 Query: 418 IDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 +DL+D++ VPIGAGCKVC RP CPQRAFP +G P+ VD S +PY Sbjct: 420 VDLSDDSTVVPIGAGCKVCSRPECPQRAFPQLGHPIHVDAAVSDSVPY 467 >tr|C0ZQH2|C0ZQH2_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus erythropolis] Length = 473 Score = 539 bits (1389), Expect = e-151 Identities = 275/471 (58%), Positives = 337/471 (71%), Gaps = 5/471 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K + G RLRRLREE L+Q ALA+AL LS SY+NQLENDQRP+TVPVLL L+ FDL Sbjct: 1 MKKMYAGARLRRLREERNLSQSALAKALELSPSYVNQLENDQRPLTVPVLLKLNAEFDLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSA----ATQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 +F DSDARLV+D+ L +++ + A+++ELVARMPAVG+TLV LHRRL AT Sbjct: 61 VQFFASDSDARLVADVHHALAETSESGEVSLAEVDELVARMPAVGRTLVMLHRRLHAATE 120 Query: 117 ELEAMHTRASADAPVPLQQ-PMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 +L+ T+ S +A + PMP+EEVRDFFYDRKNH+A LD AAE +F GL +G +D Sbjct: 121 QLDQFSTQLSGEAASDVSLVPMPYEEVRDFFYDRKNHIAVLDDAAEQMFVDNGLSVGAVD 180 Query: 176 AQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALL 235 QLA LL D+ G+ V I + KR Y PD + L +AR L GQRAFQIA Q A Sbjct: 181 LQLARLLRDQHGVTVTIRTDEPDKLGPKRFYDPDKSVLTLARRLSAGQRAFQIAMQLAFF 240 Query: 236 TQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARR 295 TQA++I LVA+ + LS E+ +ARI PY FL +AE LRYDID L+ + Sbjct: 241 TQADVIDSLVAEDESLSAESAALARIGLAHYFAGALLLPYTQFLESAEALRYDIDLLSLK 300 Query: 296 FEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVH 355 FEVGFETVCHRLSTLQR RG+PF FVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H Sbjct: 301 FEVGFETVCHRLSTLQRHGQRGIPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVIH 360 Query: 356 QAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYS 415 +AFA PG+ +TQVA+MPDGR+Y W+ARTT YL P ++FA+GLGCD+ +A R++YS Sbjct: 361 EAFASPGRILTQVAKMPDGRTYLWVARTTHSGGLGYLAPERNFAVGLGCDIGYADRMVYS 420 Query: 416 AGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 GI D A VPIGAGCKVC+RPAC QRAFP +GR + V ++SS LPYP Sbjct: 421 HGIQTDDPATIVPIGAGCKVCDRPACSQRAFPQLGRSISVSQNSSSHLPYP 471 >tr|Q5YRZ9|Q5YRZ9_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-binding protein;[Nocardia farcinica] Length = 473 Score = 535 bits (1377), Expect = e-150 Identities = 273/470 (58%), Positives = 330/470 (70%), Gaps = 5/470 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K + G RLRRLREE +TQ ALA++L LS SY+NQLE DQRP+T+PVLL L+ FDL Sbjct: 1 MRKMYAGARLRRLREERRMTQAALAKSLDLSPSYLNQLERDQRPLTIPVLLKLNSTFDLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSA----ATQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 +F DSDARLVSDL D+LVD+A A ++EEL R P V + LV +HRRL AT Sbjct: 61 VQFFAADSDARLVSDLHDVLVDAAGGDSAPLTEVEELATRQPEVARILVAMHRRLRAATD 120 Query: 117 ELEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDA 176 +L+ + R + A P PMP+E+VRDFFYD NH+ +LD AAE +F+ GL IG LD Sbjct: 121 QLDLLSARVATPAGAP-GVPMPYEDVRDFFYDHHNHIPQLDHAAEQMFEECGLTIGSLDR 179 Query: 177 QLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLT 236 QLA + + G+ V++ A KR Y P+ TL +AR L PGQRAFQIA L Sbjct: 180 QLARVAEERAGVTVLVRGDGADPAIPKRHYDPESRTLTLARRLRPGQRAFQIAATLGFLL 239 Query: 237 QAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRF 296 + + ++A+ L+ E+R +AR+ PY FL +AEELRYDID L+ RF Sbjct: 240 HGDQLDAVLAETPSLTGESRALARVGLGNYFAAALILPYGRFLRSAEELRYDIDLLSLRF 299 Query: 297 EVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQ 356 EVGFETVCHRLSTLQR RGVPF VRTD AGNISKRQSATAFHFSRVGG+CPLWVVH+ Sbjct: 300 EVGFETVCHRLSTLQRQGQRGVPFFLVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHE 359 Query: 357 AFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSA 416 AFAQPG+ +TQVA MPDGR Y WIARTTAP+ + T+ FAIGLGCD+ +A RL+YSA Sbjct: 360 AFAQPGRILTQVAAMPDGRRYLWIARTTAPAPRGFGDATREFAIGLGCDIEYADRLVYSA 419 Query: 417 GIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 G+ + D AAAVPIGAGCKVCERPACPQRAFP IG P+ V H S+DLPYP Sbjct: 420 GLPVDDPAAAVPIGAGCKVCERPACPQRAFPQIGSPLTVSEHTSTDLPYP 469 >tr|C3JF42|C3JF42_RHOER Tax_Id=596309 SubName: Full=DNA-binding protein;[Rhodococcus erythropolis SK121] Length = 473 Score = 534 bits (1376), Expect = e-150 Identities = 272/471 (57%), Positives = 336/471 (71%), Gaps = 5/471 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K + G RLRRLREE L+Q ALA+AL LS SY+NQLENDQRP+TVPVLL L+ FDL Sbjct: 1 MKKMYAGARLRRLREERNLSQSALAKALELSPSYVNQLENDQRPLTVPVLLKLNAEFDLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSA----ATQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 +F DSDARLV+D+ L +++ + A+++ELVARMPAVG+TLV LHRRL AT Sbjct: 61 VQFFASDSDARLVADVHHALAETSESGDVSLAEVDELVARMPAVGRTLVMLHRRLHAATE 120 Query: 117 ELEAMHTRASADAPVPLQQ-PMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 +L+ T+ S + + PMP+EEVRDFFYDRKNH+A LD AAE +F GL +G +D Sbjct: 121 QLDQFSTQLSGEPASDVSLVPMPYEEVRDFFYDRKNHIAVLDDAAEQMFLDNGLSVGAVD 180 Query: 176 AQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALL 235 QLA LL D+ G+ V I + KR Y P+ + L +AR L GQRAFQIA Q A Sbjct: 181 LQLARLLRDQHGVTVTIRTDEPDKLGPKRYYDPNKSVLTLARRLSAGQRAFQIAMQLAFF 240 Query: 236 TQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARR 295 TQA++I LVA+ + LS E+ +AR+ PY FL +AE LRYDID L+ + Sbjct: 241 TQADVIDSLVAEDESLSAESAALARVGLAHYFAGALLLPYTQFLQSAEALRYDIDLLSLK 300 Query: 296 FEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVH 355 FEVGFETVCHRLSTLQR RG+PF FVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H Sbjct: 301 FEVGFETVCHRLSTLQRHGQRGIPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVIH 360 Query: 356 QAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYS 415 +AFA PG+ +TQVA+MPDGR+Y W+ARTT YL P ++FA+GLGCD+ +A R++YS Sbjct: 361 EAFASPGRILTQVAKMPDGRTYLWVARTTHSGGLGYLAPERNFAVGLGCDIGYADRMVYS 420 Query: 416 AGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 GI D A VPIGAGCKVC+RPAC QRAFP +GR + V ++SS LPYP Sbjct: 421 HGIQTDDPATIVPIGAGCKVCDRPACSQRAFPQLGRSISVSENSSSHLPYP 471 >tr|D5PY22|D5PY22_COREQ Tax_Id=525370 SubName: Full=DNA-binding protein;[Rhodococcus equi ATCC 33707] Length = 482 Score = 533 bits (1372), Expect = e-149 Identities = 279/467 (59%), Positives = 324/467 (69%), Gaps = 3/467 (0%) Query: 3 KTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTH 62 K + GPRLRRLREE GLTQ+ALAR L LS SY+NQLENDQRP+TVPVLL L+ FDL H Sbjct: 13 KIYGGPRLRRLREERGLTQLALARILDLSASYVNQLENDQRPLTVPVLLKLNTTFDLDAH 72 Query: 63 YFTPDSDARLVSDLRDILVD---SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELE 119 +F +SDARL +DL+D+L A + + IEE VARMP +G LV +HRRL AT +LE Sbjct: 73 FFAAESDARLAADLQDVLTTLGTPAPSASTIEEFVARMPEIGHALVGVHRRLQAATEQLE 132 Query: 120 AMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLA 179 + PMPFEEVRDFFYDR NH+A+LD AAE +F GLRIG LD QL Sbjct: 133 QFSAHLATPTAAGDGVPMPFEEVRDFFYDRHNHIAQLDDAAEQLFVEGGLRIGSLDTQLT 192 Query: 180 ELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAE 239 LL E I V + KR+Y + L ++R L PGQRAFQIATQ A LTQ+ Sbjct: 193 ALLESEHDIVVRLRTDPPHRPGPKRVYDATNRILTLSRHLSPGQRAFQIATQLAFLTQSA 252 Query: 240 LIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEVG 299 +I + A LS ARE+A+I PY FL AAE L YDI+ LA +FEVG Sbjct: 253 VIERQLEAATGLSENARELAKIGLANYFAGALLLPYTQFLDAAEHLHYDIEMLALQFEVG 312 Query: 300 FETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFA 359 FETVCHRLSTLQRP+ RGVPF FVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH AF Sbjct: 313 FETVCHRLSTLQRPNRRGVPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHDAFG 372 Query: 360 QPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGID 419 PG+ VTQVAQMPDGR+Y WIARTT Y P +SFA+GLGCD+ HA RL+YS G+ Sbjct: 373 TPGRIVTQVAQMPDGRTYLWIARTTDDGARPYGTPDRSFAVGLGCDITHADRLVYSRGLR 432 Query: 420 LADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 L ++ + VPIGAGCK+CER C QRAFP IGRPV+VD SS LPYP Sbjct: 433 LDEQVSPVPIGAGCKICERTNCAQRAFPQIGRPVRVDVDFSSRLPYP 479 >tr|C1B6J2|C1B6J2_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 473 Score = 512 bits (1318), Expect = e-143 Identities = 263/469 (56%), Positives = 324/469 (69%), Gaps = 5/469 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K + G RLRRLREE GLTQ ALA+ LGLSTSY+NQLENDQRP+TVPVLL L+ DL Sbjct: 1 MQKMYAGGRLRRLREERGLTQSALAKTLGLSTSYVNQLENDQRPLTVPVLLRLNADLDLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAA----TQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 +F D+DARL++DL+++ ++ + I+EL++R+PA + LV LHRRL AT Sbjct: 61 MSFFAADTDARLLADLQEVFGENPEAADLSTTDIDELISRVPAAARVLVGLHRRLRGATA 120 Query: 117 ELEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDA 176 +LE T P MP+E+VRDFFYD++NH+ ELD AAE +F R L +GG+D Sbjct: 121 QLEQFSTGVDGTLADP-STAMPYEDVRDFFYDQRNHIPELDIAAENLFTSRDLTLGGMDL 179 Query: 177 QLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLT 236 QL+ LL DE I V I KR + P L +AR L PGQRAFQ+ATQ A LT Sbjct: 180 QLSRLLHDEHDITVTIRTDDPDRPGPKRTFDPQTRVLTLARRLAPGQRAFQLATQLAFLT 239 Query: 237 QAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRF 296 QAE I +V + L ++R++ARI PY FLA+AE LRYDID L+ +F Sbjct: 240 QAETIDRIVTRTESLPAQSRDLARIGLANYFAGALILPYTPFLASAEALRYDIDLLSMKF 299 Query: 297 EVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQ 356 EVGFET+CHRLSTLQR RGVPF FVRTD AGNISKRQSATAFHFSRVGG+CPLWVVH Sbjct: 300 EVGFETICHRLSTLQRRGQRGVPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHD 359 Query: 357 AFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSA 416 AFA PG+ TQ+AQMPDGRSY W+ARTT S YL + FAIGLGCDL +A +L+YS Sbjct: 360 AFATPGRIRTQIAQMPDGRSYLWLARTTDESTPGYLAQKRDFAIGLGCDLTYASKLVYSH 419 Query: 417 GIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 G+ + D + AVPIG GCKVCER C QRAFP +GR + VD ++++ +PY Sbjct: 420 GLQIDDPSTAVPIGPGCKVCERAGCAQRAFPQLGRTINVDENSAATIPY 468 >tr|Q2RRX9|Q2RRX9_RHORT Tax_Id=269796 SubName: Full=Transcriptional regulator, XRE family;[Rhodospirillum rubrum] Length = 474 Score = 486 bits (1251), Expect = e-135 Identities = 258/475 (54%), Positives = 317/475 (66%), Gaps = 14/475 (2%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K F+G RL+RLREE GLTQ ALAR L +S SY+NQ+E +QRP+TVPVLL ++ F + Sbjct: 1 MRKAFMGMRLQRLREERGLTQAALARTLEISPSYLNQMERNQRPLTVPVLLRINAAFGVD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAA----TQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 F+ D +ARL++DLR+ L +S T ++I+ L A MP +G L+TLHRR AT Sbjct: 61 VQLFSEDEEARLIADLRETLSESGTGDTITLSEIKGLAADMPMIGHALITLHRRARGATE 120 Query: 117 ELEAMHTRASADAPVPLQQ------PMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLR 170 LEAM +A VP + PMP+EEVRDFFYDR NHVAELD+AAE +F L Sbjct: 121 RLEAM----AASLGVPAESLGVAPPPMPYEEVRDFFYDRHNHVAELDEAAERLFLDADLG 176 Query: 171 IGGLDAQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIAT 230 IG +D L LL D GI VVI ++ N R + D LY++R L GQRAFQ+AT Sbjct: 177 IGAMDISLERLLRDRHGIRVVIQGRDDMAGNEHRRFDGDQRVLYLSRALEAGQRAFQMAT 236 Query: 231 QYALLTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDID 290 Q A L + L+ LV S EAR +ARI PY FL+AAE LRYD+D Sbjct: 237 QLAFLDHSALLDALVGSPRLASAEARALARIGLANYYAGALILPYGEFLSAAERLRYDVD 296 Query: 291 RLARRFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCP 350 L F VG ET+CHRLSTLQR ARGVPF F+R D AGNISKRQSAT FHFSRVGG CP Sbjct: 297 LLGEMFGVGVETICHRLSTLQRSGARGVPFFFIRVDRAGNISKRQSATDFHFSRVGGTCP 356 Query: 351 LWVVHQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAH 410 LW V+ AFA PG+ +TQ+AQMPDGR+Y W+ART ++ + P K+FAIGLGCDL HA Sbjct: 357 LWNVYAAFASPGRVLTQIAQMPDGRTYLWVARTVCHNRGGFGVPGKTFAIGLGCDLRHAD 416 Query: 411 RLIYSAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 RL+Y+ G++L+D + A PIGAGCKVCERPACPQRAFP +G+ + VD S PY Sbjct: 417 RLVYARGLNLSDASTATPIGAGCKVCERPACPQRAFPPLGKGLIVDERRSLFEPY 471 >tr|A5VFR3|A5VFR3_SPHWW Tax_Id=392499 SubName: Full=Transcriptional regulator, XRE family;[Sphingomonas wittichii] Length = 490 Score = 481 bits (1237), Expect = e-133 Identities = 252/468 (53%), Positives = 316/468 (67%), Gaps = 6/468 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K ++G RL+RLREE L QV LA ALG+S+SY+NQLE +QRP+TVPVLL ++ F + Sbjct: 25 MRKAYMGVRLKRLREERNLKQVELANALGISSSYLNQLEQNQRPLTVPVLLKINAAFGID 84 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQ--AQIEELVARMPAVGQTLVTLHRRLFDATTEL 118 F+ D +ARL+++LRD L + + + A+I EL MPAVG+TLV+LHRR ++ Sbjct: 85 VQLFSEDEEARLITELRDALAEGSESVSIAEIRELAMNMPAVGRTLVSLHRRYRESVERG 144 Query: 119 EAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQL 178 EAM + D MPFE+VRDFFY R NHV LD+AAE ++ + L + L Sbjct: 145 EAMAAQLGDDWIAGGPARMPFEQVRDFFYARHNHVEPLDEAAERLYRQANLGPRSVHQGL 204 Query: 179 AELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQA 238 L + G+ +V D+G + +R Y P L+++ L GQ+AFQ+ATQ A L Sbjct: 205 VAWLRERHGVQIVWDEG----GDAQRHYDPVRRILHLSADLRQGQQAFQMATQLAFLELG 260 Query: 239 ELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEV 298 ++I L + EAR +AR+ PY FLAAAE YDI +L RRF V Sbjct: 261 DVIGRLSDSSILTGDEARRLARVGLANYFAGALILPYGDFLAAAEAEGYDIAKLGRRFGV 320 Query: 299 GFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAF 358 GFET+CHRLSTLQRP+ARGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW V++AF Sbjct: 321 GFETICHRLSTLQRPEARGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNVYEAF 380 Query: 359 AQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGI 418 AQPG+ +TQ+AQMPDGRSY WIART + Y P KSFA+GLGCD+ HA RL+YS G+ Sbjct: 381 AQPGRLLTQIAQMPDGRSYLWIARTVDRGSAGYGMPGKSFAVGLGCDIRHAGRLVYSRGL 440 Query: 419 DLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 DL D AAA PIGAGCKVCERPACPQRAFP IGRPV +D + S+ PYP Sbjct: 441 DLTDPAAATPIGAGCKVCERPACPQRAFPPIGRPVAIDENRSAPTPYP 488 >tr|Q1N883|Q1N883_9SPHN Tax_Id=314266 SubName: Full=Transcriptional Regulator, XRE family protein;[Sphingomonas sp. SKA58] Length = 461 Score = 469 bits (1206), Expect = e-130 Identities = 250/463 (53%), Positives = 310/463 (66%), Gaps = 6/463 (1%) Query: 6 IGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTHYFT 65 +G RLRRLREE L QV LA ALG+S+SY+NQLE +QRP+TVPVLL ++ F + F+ Sbjct: 1 MGVRLRRLREERKLKQVDLANALGISSSYLNQLEQNQRPLTVPVLLKINAVFGVDVQLFS 60 Query: 66 PDSDARLVSDLRDILVDSAA--TQAQIEELVARMPAVGQTLVTLHRRLFDATTELEAMHT 123 D +ARL+++LRD L DSA + A+I EL MPAVG+TL++LHRR +A EAM Sbjct: 61 EDEEARLITELRDALSDSAEAISVAEIRELATNMPAVGRTLISLHRRYREAAERSEAMAA 120 Query: 124 RASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAELLS 183 + D M FE+VRDFFY R NHV LD+AAE ++ GL + L L Sbjct: 121 QLGDDWISGGPARMAFEQVRDFFYARHNHVKPLDEAAERIYREAGLAPHSVHPGLVAWLK 180 Query: 184 DELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAELIAE 243 D + +V + S +R Y P TL+V+ LH GQ+AFQ+ATQ A L +I Sbjct: 181 DRHDVQIVWGE----SDTAQRRYDPATRTLHVSAHLHQGQQAFQMATQLAFLELGSVIDR 236 Query: 244 LVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEVGFETV 303 L ++ EAR +AR+ PY FLAAAE YDI++L RRF VGFET+ Sbjct: 237 LADNSLLSGDEARRLARVGLANYFAGALILPYGDFLAAAEAEAYDIEKLGRRFGVGFETI 296 Query: 304 CHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQPGQ 363 CHRLSTLQR +ARG+PF FVR D AGNISKRQSAT FHFSRVGG+CPLW V++AF QPG+ Sbjct: 297 CHRLSTLQRAEARGIPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWKVYEAFTQPGR 356 Query: 364 FVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDLADE 423 + Q+AQMPDGR+Y WIART + + + P K+FA+GLGCD+ HA RLIYS G+DL D Sbjct: 357 VLRQIAQMPDGRTYLWIARTVSSGNAGFDVPGKTFAVGLGCDIRHASRLIYSRGLDLDDP 416 Query: 424 AAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 AAA PIGAGCKVCERPACPQRAFP IGR V VD + S+ PYP Sbjct: 417 AAATPIGAGCKVCERPACPQRAFPAIGRAVAVDENRSTLAPYP 459 >tr|C9CWQ0|C9CWQ0_9RHOB Tax_Id=644076 SubName: Full=DNA-binding protein;[Silicibacter sp. TrichCH4B] Length = 461 Score = 469 bits (1206), Expect = e-130 Identities = 242/467 (51%), Positives = 313/467 (67%), Gaps = 11/467 (2%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K ++G RLRRLREE G+TQ ALAR L LS SY+NQ+E +QRP+TVPVLL L+ F L Sbjct: 1 MKKAYMGVRLRRLREERGMTQAALARTLELSPSYLNQMERNQRPLTVPVLLRLNAVFGLD 60 Query: 61 THYFTPDSDARLVSDLRDILVD--SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTEL 118 F+ +ARL+ DLR L D +AA+ A++ E+ A MP + Q ++++ RL D + ++ Sbjct: 61 VQLFSEAEEARLIPDLRAALADQGAAASLAEVREIAANMPGIAQAIISMQNRLRDTSEQV 120 Query: 119 EAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQL 178 + M R S + +P PFE VRD+FY +N++A LD+A E + +G+R G + L Sbjct: 121 DLMAGRLSGETGA---EPAPFEAVRDYFYHNRNYIAALDEAGEAL--GQGIRAGRMAEGL 175 Query: 179 AELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQA 238 +E L+ GI V +DD A+ R + L+++ L PGQRAFQ+ATQ A L Q Sbjct: 176 SERLAGRHGIRVSMDD----DASALRRFDDSAGVLHLSSRLTPGQRAFQMATQLAFLEQG 231 Query: 239 ELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEV 298 ++IA+L DA +AR + RI PYR FL AAE YDI+RLA RF V Sbjct: 232 DVIAQLADDAGLAGEDARTLLRIGLANYFAGAVILPYRSFLEAAESEGYDIERLAHRFGV 291 Query: 299 GFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAF 358 GFET CHRLSTLQRP+ARGVPF F+R D AGNISKRQSAT FHFSR+GG+CPLW V++AF Sbjct: 292 GFETTCHRLSTLQRPEARGVPFFFIRVDRAGNISKRQSATDFHFSRIGGSCPLWNVYEAF 351 Query: 359 AQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGI 418 ++PG+ +TQVAQMPDGRSY WIART + + P K FA+ LGCDLAHA RL+Y+ G+ Sbjct: 352 SRPGEVLTQVAQMPDGRSYLWIARTVSHGTGGFGAPVKRFAVALGCDLAHAERLVYARGV 411 Query: 419 DLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 DL + A PIGAGCKVC+RPACPQRAFP GRP + D +S PY Sbjct: 412 DLRNPDLATPIGAGCKVCDRPACPQRAFPMSGRPARTDADRTSFAPY 458 >tr|B6IXX7|B6IXX7_RHOCS Tax_Id=414684 SubName: Full=Putative uncharacterized protein;[Rhodospirillum centenum] Length = 484 Score = 467 bits (1202), Expect = e-129 Identities = 257/470 (54%), Positives = 307/470 (65%), Gaps = 14/470 (2%) Query: 3 KTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTH 62 K F+G RLRRLREE GLTQ ALARAL LS SY+NQLE + RP+TVPVLL ++ F + Sbjct: 22 KQFVGVRLRRLREERGLTQAALARALELSPSYLNQLEQNLRPLTVPVLLRINAVFGVDVQ 81 Query: 63 YFTPDSDARLVSDLRDILVDSAATQ----AQIEELVARMPAVGQTLVTLHRRLFDATTEL 118 F+ D +ARL++DLR+ L ++ A++ EL A MPAVG+ L+ LHRR +A L Sbjct: 82 MFSEDDEARLIADLREALSEAGLADGVALAELRELAAGMPAVGRALLALHRRGREAAGRL 141 Query: 119 EAMHTRASA---DAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 E + DA PL MPFEEVRDFFY R NHVAELD+A E + GL G + Sbjct: 142 EQLSGHLGEGWQDAAKPL---MPFEEVRDFFYARHNHVAELDEAGEALQREAGLVAGDMA 198 Query: 176 AQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALL 235 A LA L+ + V+ D A R Y TL ++ L PGQRAFQ+ATQ A L Sbjct: 199 AGLARHLARRHDVRVLADG----EAAVPRRYDAASRTLRLSADLTPGQRAFQMATQLAFL 254 Query: 236 TQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARR 295 + ++ L+A AD EAR +ARI PYR FLAAAE LRYDI+RL R+ Sbjct: 255 DRGAMLDGLIAQADFSGEEARRLARIGLASYFAGAVLLPYRPFLAAAEALRYDIERLERQ 314 Query: 296 FEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVH 355 F VGFETVCHRLSTLQRP RGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW V+ Sbjct: 315 FGVGFETVCHRLSTLQRPGERGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNVY 374 Query: 356 QAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYS 415 +AFAQPG+ + Q A MPDGR Y W+ART + P + FA+GLGCDL HA RL+Y+ Sbjct: 375 EAFAQPGRILIQRAAMPDGRQYLWLARTVGRGAGGFGAPARQFAVGLGCDLRHAARLVYA 434 Query: 416 AGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 G+DLAD AA PIGAGCKVCER C QRAFP IGRP++VD PY Sbjct: 435 KGLDLADPEAATPIGAGCKVCERADCAQRAFPMIGRPLQVDEAVRRFAPY 484 >tr|C6QII4|C6QII4_9RHIZ Tax_Id=582899 SubName: Full=Transcriptional regulator, XRE family;[Hyphomicrobium denitrificans ATCC 51888] Length = 472 Score = 465 bits (1196), Expect = e-129 Identities = 244/471 (51%), Positives = 315/471 (66%), Gaps = 6/471 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K F+G RL+RLREE GLTQVALARAL LS SY+NQ+E +QRP+TVP+LL ++ F + Sbjct: 1 MRKAFMGVRLKRLREERGLTQVALARALELSPSYLNQIEKNQRPLTVPILLKINSVFGVD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQ----AQIEELVARMPAVGQTLVTLHRRLFDATT 116 F+ D +ARL++DL+D+L D + +I E+ A MPAVG+ +V L R A+ Sbjct: 61 VQLFSEDEEARLIADLKDVLADPGLGEHVALTEIREIAANMPAVGRAIVALQARSRQASE 120 Query: 117 ELEAMHTRASADAP-VPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 +AM +R A + MP+E+VRD+FY N++AELD+AAE +FD+ L IG + Sbjct: 121 RADAMASRFGLSAEEIEPATLMPYEKVRDYFYAHHNYIAELDEAAEALFDKAQLVIGDVA 180 Query: 176 AQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALL 235 L E L E G+++VI + +R R TL ++ L+PGQ+AF++ATQ A L Sbjct: 181 TGLREYLRSEHGVDIVIVPATDTLSPQRRFNRA-RRTLELSANLNPGQQAFEMATQLAFL 239 Query: 236 TQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARR 295 + + L DA D S E +ARI PY FL AAE LRYDID L +R Sbjct: 240 DIGDTLDRLAKDAADDSDETFRLARIGLANHFAGALVMPYTPFLEAAEALRYDIDLLGQR 299 Query: 296 FEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVH 355 F VGFETVCHRLSTLQR ++RGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW V+ Sbjct: 300 FGVGFETVCHRLSTLQRSESRGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNVY 359 Query: 356 QAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYS 415 +AF+ PG+ +TQ+AQMPDGR+Y W+ART + + P K+FAIGLGCDL+HA+RL+Y+ Sbjct: 360 EAFSTPGRILTQLAQMPDGRTYLWVARTVSRGHGGFGAPVKTFAIGLGCDLSHANRLVYA 419 Query: 416 AGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 G++LA+ AVPIG GCKVCERP CPQRAFP IG VD + PYP Sbjct: 420 KGLNLANSGVAVPIGVGCKVCERPNCPQRAFPPIGGRTAVDENERRFTPYP 470 >tr|A1WR95|A1WR95_VEREI Tax_Id=391735 SubName: Full=Transcriptional regulator, XRE family;[Verminephrobacter eiseniae] Length = 524 Score = 459 bits (1180), Expect = e-127 Identities = 248/477 (51%), Positives = 307/477 (64%), Gaps = 13/477 (2%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M KTFIG RLRRLREE G+ Q ALA AL LS SY+NQLE +QRP+TV VLL ++ F L Sbjct: 29 MRKTFIGVRLRRLREERGMNQAALAHALELSPSYLNQLEQNQRPLTVAVLLKINRMFGLD 88 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQ----AQIEELVARMPAVGQTLVTLHRRLFDATT 116 F+ D +ARL+SDLR++L +AA A++ EL A MPAV +TL+ +H R +A Sbjct: 89 VQMFSDDDEARLISDLREVLAHAAAPDTVSLAEVRELAAGMPAVARTLIRMHGRQREALA 148 Query: 117 ELEAMHTRASAD-APVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 +E M R + + +P PMP+EEVRDFF R+NH+ ELD+AAE R G + Sbjct: 149 RIEDMALRLGDERSGLPGIPPMPYEEVRDFFTARQNHIGELDEAAE----RMAAEWAGSE 204 Query: 176 AQ---LAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQY 232 + L L + VV D +R Y P L ++ L GQ AFQ+ATQ Sbjct: 205 SVAQGLERRLQQRHAVRVVQTDPDS-GDTVQRCYDPQRRLLQLSASLDAGQAAFQMATQL 263 Query: 233 ALLTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRL 292 A L ++++ L A AD AR +ARI PY FL AAE RYDIDRL Sbjct: 264 AFLEMSDMLHRLSASADLSCEPARALARIGLANYFAGALLLPYTRFLEAAEAWRYDIDRL 323 Query: 293 ARRFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLW 352 RRF VGFETVCHRLSTLQRP AR VPF FVR D AGNISKRQSAT FHFSR GG CPLW Sbjct: 324 GRRFGVGFETVCHRLSTLQRPSARAVPFFFVRVDRAGNISKRQSATHFHFSRAGGTCPLW 383 Query: 353 VVHQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRL 412 V++AFAQPG+ +TQ+A+MPDGR+Y W+AR+ + +Q Y P K+FAIGLGCD+ HA RL Sbjct: 384 NVYEAFAQPGRILTQLARMPDGRAYLWVARSVSSAQEGYGQPGKTFAIGLGCDIQHAPRL 443 Query: 413 IYSAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTVN 469 +Y+ G+DL D PIG GCKVCER ACPQRAFP+IGR + +D + + PYP N Sbjct: 444 VYAKGLDLKDPQVPTPIGMGCKVCEREACPQRAFPFIGRQIDIDENRRTLTPYPVQN 500 >tr|D2LF72|D2LF72_RHOVA Tax_Id=648757 SubName: Full=Transcriptional regulator, XRE family;[Rhodomicrobium vannielii ATCC 17100] Length = 477 Score = 458 bits (1179), Expect = e-127 Identities = 245/472 (51%), Positives = 306/472 (64%), Gaps = 7/472 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K F+G +L+RLREE GLTQ+A A A+GLS SY+NQLE +QRP+TVPVLL ++ F Sbjct: 1 MKKVFVGVKLKRLREERGLTQIAFAEAIGLSASYLNQLEKNQRPLTVPVLLRINATFGAD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQ----AQIEELVARMPAVGQTLVTLHRRLFDATT 116 + +AR+++DL+++ D A+ + A+I E+ A MPA G+ +V LHRRL T Sbjct: 61 MQLLSDGDEARMIADLKEVFSDPASGETVSLAEIREIAASMPAAGRAIVALHRRLRHVTE 120 Query: 117 ELEAM-HTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLD 175 +AM H A + PMPFE+VRDFFY N+ AELD+AAE +F L G + Sbjct: 121 RGDAMAHELGLGAAGLATVAPMPFEQVRDFFYRHHNYFAELDEAAEKLFAEAELVEGEVV 180 Query: 176 AQLAELLSDELGINVVI--DDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYA 233 LA L G+ + + +G+ S R Y P L ++ L GQRAFQ+ATQ A Sbjct: 181 EGLARYLEQRHGVRIGVRKPEGEAPSRQANRDYNPKERVLRLSARLDQGQRAFQMATQLA 240 Query: 234 LLTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLA 293 L E + L +A S +ARI PYR FLAAAE RYDIDRLA Sbjct: 241 FLEMGEPLNRLAREAALGSPATHALARIGLANYFAAALLMPYRAFLAAAEAARYDIDRLA 300 Query: 294 RRFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWV 353 +F VGFET+ HRLS+LQRP A GVPF +R D AGNISKRQSAT FHFSRVGG CPLW Sbjct: 301 EQFGVGFETISHRLSSLQRPSAAGVPFFLIRVDRAGNISKRQSATDFHFSRVGGACPLWN 360 Query: 354 VHQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLI 413 V++AFAQPG+ +TQVAQM DGR+Y WIAR + Y P K+FAIGLGCD+ HA RL+ Sbjct: 361 VYEAFAQPGRTLTQVAQMTDGRTYLWIARAVRHTVGGYGEPDKTFAIGLGCDIRHAPRLV 420 Query: 414 YSAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 YS G+DL D AAA PIGAGCKVCERP+CPQRAFP IGR + V+ + S+ LPY Sbjct: 421 YSKGLDLDDPAAATPIGAGCKVCERPSCPQRAFPMIGRSLAVNENRSTFLPY 472 >tr|C7MW49|C7MW49_SACVD Tax_Id=471857 SubName: Full=Predicted transcriptional regulator;[Saccharomonospora viridis] Length = 475 Score = 451 bits (1161), Expect = e-125 Identities = 231/472 (48%), Positives = 310/472 (65%), Gaps = 5/472 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M+KTF G RLR LRE ++Q LAR L +S SY+NQ+E++ RP+TVPVLL ++E F + Sbjct: 1 MSKTFAGARLRHLRESRSMSQAELARLLEISPSYLNQIEHNTRPLTVPVLLRITEAFGVD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAA----TQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 +F + +RLV+D+R+ L+D + + +I +L +P+V Q LV LHR +A Sbjct: 61 AEFFANNDTSRLVADVREALLDESVNADVSPGEINDLAKNLPSVAQALVKLHRNYRNAIE 120 Query: 117 ELEAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDA 176 A+ T P+P EEVRDFFY+R+N+VAELD+ AE +++ GLR + Sbjct: 121 ATAALVTEDGRGTHGSPAAPLPHEEVRDFFYERENYVAELDERAEKMYEELGLRRDEIRN 180 Query: 177 QLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLT 236 L + L++ G+ V + G L+A + Y PD L +A L GQ+AF++A+Q ALL Sbjct: 181 GLRDRLAEHYGVTVTTE-GLNLAAGEQHRYEPDAKVLRLAPTLRIGQQAFRMASQIALLE 239 Query: 237 QAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRF 296 +LI EL AR +AR+ PY+ FL+AAE RYDI+ L F Sbjct: 240 YDDLITELADSWAFSGPPARSLARVGLANYFAGALILPYKAFLSAAERFRYDIELLCEHF 299 Query: 297 EVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQ 356 VGFETVCHRLSTLQRP RG+PF FVR D AGN+SKRQSA FHFSRVGG CPLWV+++ Sbjct: 300 GVGFETVCHRLSTLQRPKMRGIPFSFVRVDRAGNMSKRQSAAGFHFSRVGGACPLWVIYE 359 Query: 357 AFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSA 416 AF +PG+ + QV +PDG+SYFWIART + + Y P K F++GLGC+L HAHRL+YSA Sbjct: 360 AFTRPGKILPQVVTLPDGKSYFWIARTVSRNIGGYGSPGKMFSVGLGCELRHAHRLVYSA 419 Query: 417 GIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPTV 468 G++L D++AA PIG GCKVCERPACPQRAFP IG+ + VD + S+ +PYP V Sbjct: 420 GLNLDDKSAATPIGMGCKVCERPACPQRAFPTIGKELTVDENTSTFVPYPAV 471 >tr|B3QGB8|B3QGB8_RHOPT Tax_Id=395960 SubName: Full=Transcriptional regulator, XRE family;[Rhodopseudomonas palustris] Length = 474 Score = 446 bits (1146), Expect = e-123 Identities = 236/473 (49%), Positives = 306/473 (64%), Gaps = 6/473 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K ++G RLRRLRE+ G+TQ ALA A+G+S SY+NQ+EN+QRP+TVPVLL L+ + Sbjct: 1 MKKAYVGARLRRLREQRGMTQQALATAVGVSPSYLNQIENNQRPLTVPVLLKLNATLGID 60 Query: 61 THYFTPDSDARLVSDLRDILVD----SAATQAQIEELVARMPAVGQTLVTLHRRLFDATT 116 F+ D +ARL++DL+++L D + T + ELV MPA G+ LV ++RR A Sbjct: 61 VQLFSEDDEARLIADLKEVLSDPMVGESLTANDVRELVTSMPAAGRALVAIYRRYHLALE 120 Query: 117 ELEAMHTRASADAPVPLQQPM--PFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGL 174 + A+ R D M PFEEVRDFFY R N++AELD+AAE G I + Sbjct: 121 QSAALAARLGDDRQDRPTSAMSTPFEEVRDFFYARHNYIAELDEAAERTAAGTGRTIQQV 180 Query: 175 DAQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYAL 234 A LAE L GI+V + + SA+ +R + TL ++ L PGQ+AFQI TQ A Sbjct: 181 AASLAERLKSHHGIDVRVGETGDASADLQRNFDSGDKTLRLSARLQPGQQAFQIGTQLAF 240 Query: 235 LTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLAR 294 L + I LV + +R +ARI PY F AE +RYDI + + Sbjct: 241 LEHRDTIDALVGENPFGDEASRRLARIGLANYFAGALLLPYAGFREKAESVRYDITLIGQ 300 Query: 295 RFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVV 354 F VG+ETVCHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFSR GG CPLW V Sbjct: 301 HFGVGYETVCHRLSTLQRPGARGVPFFFIRVDRAGNISKRQSATDFHFSRGGGTCPLWNV 360 Query: 355 HQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIY 414 ++AF+QP + +TQ+A+MPD R+Y W+ART + Q+ Y P K+FA+ LGCDL HA RL+Y Sbjct: 361 YEAFSQPDRILTQLARMPDHRTYLWVARTVSHDQAGYHAPRKTFAVALGCDLQHAGRLVY 420 Query: 415 SAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPT 467 S G+DL + AAA PIGAGC++CER ACPQRAFP +GRP+ VD + +S PY T Sbjct: 421 SDGLDLTNPAAATPIGAGCRICERQACPQRAFPPVGRPLHVDENRNSFSPYST 473 >tr|A1B1R0|A1B1R0_PARDP Tax_Id=318586 SubName: Full=Transcriptional regulator, XRE family;[Paracoccus denitrificans] Length = 461 Score = 443 bits (1140), Expect = e-122 Identities = 234/467 (50%), Positives = 305/467 (65%), Gaps = 13/467 (2%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M K+F+G RLRRLREE G+TQ ALARALG+S SY+NQ+E +QRP+TVPVLL L+ F L Sbjct: 1 MTKSFMGVRLRRLREERGMTQAALARALGISPSYLNQIEQNQRPLTVPVLLRLNGAFGLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAA--TQAQIEELVARMPAVGQTLVTLHRRLFDATTEL 118 F+ +ARL++DLR L D A A++ EL + MP + + +V + RL + Sbjct: 61 VQLFSDAEEARLITDLRAALADQGAPAATAELRELASNMPGIARAIVAMQARLRETAERA 120 Query: 119 EAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQL 178 + + R + P P FE VRD+FYDR+NHV EL+ +AE + L G + A L Sbjct: 121 DLLAGRLTE--PQAAATPAAFEAVRDWFYDRRNHVPELETSAEAIGS--ALPPGRMAAGL 176 Query: 179 AELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQA 238 + L+ GI + +D A+ R + L++A L+ GQ+AFQIATQ A L Q Sbjct: 177 VDRLAGRHGIRIALD------ADSLRRFDSGARILHLAPHLNEGQQAFQIATQLAFLEQG 230 Query: 239 ELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEV 298 E IA L +D DL+++A+ + RI PY FL AE + YDID ++RRF V Sbjct: 231 ETIARL-SDDPDLASDAQALLRIGLANYFAGALILPYGAFLQEAEAVAYDIDLISRRFGV 289 Query: 299 GFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAF 358 GFET CHRLSTLQRP+ARGVPF F+R D AGNISKRQSAT FHFSR+GG+CPLW V++AF Sbjct: 290 GFETACHRLSTLQRPEARGVPFFFIRVDRAGNISKRQSATDFHFSRIGGSCPLWNVYEAF 349 Query: 359 AQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGI 418 ++PG+ V Q+AQMPDGRSY WIAR + + + P K+FA+ LGCDLAHA RL+Y+ G+ Sbjct: 350 SRPGEIVRQIAQMPDGRSYLWIARVVSHGRGGFGAPVKTFAVALGCDLAHADRLVYARGL 409 Query: 419 DLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 DL + A IG GCKVCERPACPQRAFP +GRP+ V + PY Sbjct: 410 DLKNPELATRIGPGCKVCERPACPQRAFPMVGRPLAVSIAEARFAPY 456 >tr|D5AS47|D5AS47_RHOCB Tax_Id=272942 SubName: Full=Transcriptional regulator, XRE family;[Rhodobacter capsulatus] Length = 460 Score = 440 bits (1132), Expect = e-121 Identities = 235/467 (50%), Positives = 306/467 (65%), Gaps = 13/467 (2%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 MAK F+G RL+RLRE+ G+TQ +LARAL +S SY+NQ+EN+QRP+TVPVLL L+ F L Sbjct: 1 MAKAFMGVRLKRLREDRGITQASLARALEISPSYLNQIENNQRPLTVPVLLKLNAAFGLD 60 Query: 61 THYFTPDSDARLVSDLRDILVD--SAATQAQIEELVARMPAVGQTLVTLHRRLFDATTEL 118 F+ +ARL+++LR L D + A+ A++ E+ A MPAV + +V + RL D + Sbjct: 61 VQLFSDADEARLIAELRGALADQGAGASLAEVREIAANMPAVARAIVAMQARLRDLSDRA 120 Query: 119 EAMHTRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQL 178 +A+ + S A P FE VRD+FY+R+NHV +LD AAE V L G + L Sbjct: 121 DALAGQISTPAS---SSPAAFEAVRDWFYERRNHVPDLDTAAEAV--GADLPAGRMAQPL 175 Query: 179 AELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQA 238 AE L+ GI ++ +G +L R + P L++ L PGQ+AFQIATQ ALL Q Sbjct: 176 AERLATRHGIRILHAEGGIL-----RRFEPGAGLLHLGAHLTPGQQAFQIATQLALLEQG 230 Query: 239 ELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLARRFEV 298 L+A L A A L EA+ + R+ PYR FLAAAE L YDI+ LA RF V Sbjct: 231 GLMARLCA-ATQLDPEAQALLRVGLANYYAGALIMPYRAFLAAAEALSYDIELLAHRFGV 289 Query: 299 GFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAF 358 GFETVCHRLSTLQRP+ARGVPF F+R D AGNISKRQSAT FHFSR+GG+CPLW +++AF Sbjct: 290 GFETVCHRLSTLQRPEARGVPFFFIRVDRAGNISKRQSATDFHFSRIGGSCPLWNIYEAF 349 Query: 359 AQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGI 418 ++P + + QVAQMPDGRSY WIAR + K FA+ LGCDLAHA RL+Y+ G+ Sbjct: 350 SRPDEILRQVAQMPDGRSYLWIARQLRQGGGGFGAAEKRFAVALGCDLAHADRLVYARGL 409 Query: 419 DLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPY 465 +L A IG GCK+CER CPQRAFP +G+P+++ P + PY Sbjct: 410 NLRAPDLATKIGPGCKLCERADCPQRAFPTLGKPLRLRPEETRFAPY 456 >tr|A1W6F4|A1W6F4_ACISJ Tax_Id=232721 SubName: Full=Transcriptional regulator, XRE family;[Acidovorax sp.] Length = 490 Score = 440 bits (1131), Expect = e-121 Identities = 243/484 (50%), Positives = 304/484 (62%), Gaps = 22/484 (4%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M KTF+G RLRRLREE GLTQVALARAL +S SY+NQ+E +QRP+TVPVLL ++ F + Sbjct: 1 MKKTFMGVRLRRLREERGLTQVALARALEISASYLNQIEQNQRPLTVPVLLKINAVFGVD 60 Query: 61 THYFTPDSDARLVSDLRDILVD-------SAATQAQIEELVARMPAVGQTLVTLHRRLFD 113 +F+ +ARL++ LRD+L D A + A++ EL A MPAV + L+ LHR + Sbjct: 61 VQHFSEGDEARLIAGLRDVLADLPPGAPADAVSLAEVRELAANMPAVARVLLALHRGRAE 120 Query: 114 ATTELEAMHTR-------ASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDR 166 A LEA+ A++ A P PM +EEVRDFF+ R NH+AELD AAE + + Sbjct: 121 ARERLEALAAHYGDERGGAASTAQTP---PMAYEEVRDFFFARHNHIAELDDAAEHLAAQ 177 Query: 167 RGLRIGGLDAQLAELLSDELGINVVI---DDGQVLSANGKRIYRPDHAT--LYVARWLHP 221 L G A L L G+ V + DG R D A LY++ L Sbjct: 178 WRLAPGAAGAALQARLEQAHGVRVALLQGGDGDEAGEGAAVQRRFDAAARVLYLSPTLQG 237 Query: 222 GQRAFQIATQYALLTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAA 281 QRAFQ+ATQ A L L+ V A AR +ARI PY FL Sbjct: 238 AQRAFQMATQLAFLEVPHLLQHSVQGAALSGEAARTLARIGLANYFAGALLLPYGAFLRT 297 Query: 282 AEELRYDIDRLARRFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFH 341 AE L YDI+RL + + VGFETVCHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FH Sbjct: 298 AEALHYDIERLGQHWGVGFETVCHRLSTLQRPGARGVPFFFIRVDRAGNISKRQSATHFH 357 Query: 342 FSRVGGNCPLWVVHQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIG 401 FS++GG CPLW V++AFAQPG+ V Q+A+MPDGR Y WIART S + P K+F++ Sbjct: 358 FSKIGGTCPLWNVYEAFAQPGRIVRQLARMPDGRVYLWIARTVTRSTGGWGAPGKTFSVA 417 Query: 402 LGCDLAHAHRLIYSAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASS 461 LGCD+ HA +L+Y+ G+DLAD A VPIG GCKVCER ACPQRAFP +GRP++V+ + Sbjct: 418 LGCDVQHAGQLVYARGLDLADPEAPVPIGMGCKVCERTACPQRAFPPVGRPLEVNEDMAG 477 Query: 462 DLPY 465 PY Sbjct: 478 FTPY 481 >tr|Q07LS5|Q07LS5_RHOP5 Tax_Id=316055 SubName: Full=Transcriptional regulator, XRE family;[Rhodopseudomonas palustris] Length = 472 Score = 439 bits (1128), Expect = e-121 Identities = 236/473 (49%), Positives = 306/473 (64%), Gaps = 9/473 (1%) Query: 1 MAKTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLP 60 M KTF+G RL+RLRE+ LTQ ALA LG+S SY+NQLEN+QRP+T+PV L+L+ F L Sbjct: 1 MKKTFLGVRLKRLREQQRLTQAALAAKLGISLSYLNQLENNQRPLTLPVALALNATFGLD 60 Query: 61 THYFTPDSDARLVSDLRDILVDSAATQ----AQIEELVARMPAVGQTLVTLHRRLFDATT 116 F+ D +ARL++DLR+ + D A + A + EL MPA+G+TLV L +R A Sbjct: 61 IQSFSDDDEARLIADLREAVADPALVETIATADLRELALNMPAIGRTLVALSQRYRQAIE 120 Query: 117 ELEAMHTRASAD--APVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGL 174 + A+ R D A + PFEEVRDFFY N+++ELD+AAE + R L+ G + Sbjct: 121 QSAALSARLGEDRQAASAILPSTPFEEVRDFFYAHHNYISELDEAAEAIALRMNLQPGRM 180 Query: 175 DAQLAELLSDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYAL 234 L LL + GI ++ID + +R + T+ ++ L PGQ+AFQ+ATQ A Sbjct: 181 APALTSLLEGDRGITILIDGST--ESGLQREFDRQSRTVRLSSSLSPGQQAFQLATQIAF 238 Query: 235 LTQAELIAELVADADDLSTEAREVARIXXXXXXXXXXXXPYRMFLAAAEELRYDIDRLAR 294 L + I +V++A S E+R +ARI PY FL A+ RYDI+ L Sbjct: 239 LDFDDAIRSIVSNAAFTSDESRGLARIGLAHYFAGALVLPYSAFLQEAQRRRYDIELLGH 298 Query: 295 RFEVGFETVCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVV 354 F VGFETVCHRLSTLQR +ARGVPF FVR D AGNISKRQSAT FHFSRVGG CPLW V Sbjct: 299 TFGVGFETVCHRLSTLQRHNARGVPFFFVRVDRAGNISKRQSATDFHFSRVGGTCPLWNV 358 Query: 355 HQAFAQPGQFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIY 414 ++AFA PG+ +TQ+A+MPD R+Y WIART + SQ + P K+FA+ LGCD+ HA ++Y Sbjct: 359 YEAFACPGRILTQLARMPDERTYLWIARTVSHSQGGHRAPAKTFAVALGCDVRHAGSVVY 418 Query: 415 SAGIDLADEAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYPT 467 S G+D+ D A A PIG GCKVCERP CPQRAFP IG+ + VD + PY T Sbjct: 419 SEGLDI-DPAVATPIGMGCKVCERPNCPQRAFPPIGQALHVDETRAHFAPYAT 470 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.322 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 3,651,226,920 Number of extensions: 146706566 Number of successful extensions: 397613 Number of sequences better than 10.0: 2330 Number of HSP's gapped: 398532 Number of HSP's successfully gapped: 2381 Length of query: 472 Length of database: 4,236,830,644 Length adjustment: 142 Effective length of query: 330 Effective length of database: 2,460,713,956 Effective search space: 812035605480 Effective search space used: 812035605480 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 83 (36.6 bits)