BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MSMEG_6946 (47 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 12,507,864 sequences; 4,236,830,644 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P0C562|RL34_MYCSM Tax_Id=1772 (rpmH)RecName: Full=50S ribosom... 96 2e-18 sp|A0R7K0|RL34_MYCS2 Tax_Id=246196 (rpmH)RecName: Full=50S ribos... 96 2e-18 sp|A0PX71|RL34_MYCUA Tax_Id=362242 (rpmH)RecName: Full=50S ribos... 90 1e-16 sp|B2HNT9|RL34_MYCMM Tax_Id=216594 (rpmH)RecName: Full=50S ribos... 90 1e-16 sp|Q1B0S1|RL34_MYCSS Tax_Id=164756 (rpmH)RecName: Full=50S ribos... 89 2e-16 sp|A1U8R9|RL34_MYCSK Tax_Id=189918 (rpmH)RecName: Full=50S ribos... 89 2e-16 sp|A3Q8S5|RL34_MYCSJ Tax_Id=164757 (rpmH)RecName: Full=50S ribos... 89 2e-16 sp|Q9L7L8|RL34_MYCPA Tax_Id=1770 (rpmH)RecName: Full=50S ribosom... 89 2e-16 sp|A0QND5|RL34_MYCA1 Tax_Id=243243 (rpmH)RecName: Full=50S ribos... 89 2e-16 tr|D5UPA2|D5UPA2_TSUPA Tax_Id=521096 SubName: Full=Ribosomal pro... 88 3e-16 sp|P46386|RL34_MYCLE Tax_Id=1769 (rpmH)RecName: Full=50S ribosom... 88 4e-16 sp|B8ZTN7|RL34_MYCLB Tax_Id=561304 (rpmH)RecName: Full=50S ribos... 88 4e-16 sp|A1TI30|RL34_MYCVP Tax_Id=350058 (rpmH)RecName: Full=50S ribos... 87 5e-16 sp|A4T4T9|RL34_MYCGI Tax_Id=350054 (rpmH)RecName: Full=50S ribos... 87 5e-16 sp|B1MN97|RL34_MYCA9 Tax_Id=561007 (rpmH)RecName: Full=50S ribos... 87 5e-16 sp|Q0SAG8|RL34_RHOSR Tax_Id=101510 (rpmH)RecName: Full=50S ribos... 86 1e-15 sp|C1B7S6|RL34_RHOOB Tax_Id=632772 (rpmH)RecName: Full=50S ribos... 86 1e-15 sp|Q6M1C1|RL34_CORGL Tax_Id=1718 (rpmH)RecName: Full=50S ribosom... 86 1e-15 sp|A4QIE6|RL34_CORGB Tax_Id=340322 (rpmH)RecName: Full=50S ribos... 86 1e-15 tr|D5P9Z8|D5P9Z8_9MYCO Tax_Id=525368 (rpmH)SubName: Full=50S rib... 86 1e-15 sp|Q4JSC1|RL34_CORJK Tax_Id=306537 (rpmH)RecName: Full=50S ribos... 86 2e-15 sp|Q6NE95|RL34_CORDI Tax_Id=1717 (rpmH)RecName: Full=50S ribosom... 86 2e-15 tr|D0L9D2|D0L9D2_GORB4 Tax_Id=526226 RecName: Full=50S ribosomal... 86 2e-15 tr|C8RVF8|C8RVF8_CORJE Tax_Id=525262 (rpmH)RecName: Full=50S rib... 86 2e-15 sp|C0ZVP8|RL34_RHOE4 Tax_Id=234621 (rpmH)RecName: Full=50S ribos... 86 2e-15 sp|Q5YMR6|RL34_NOCFA Tax_Id=37329 (rpmH)RecName: Full=50S riboso... 86 2e-15 tr|C3JLD6|C3JLD6_RHOER Tax_Id=596309 (rpmH)RecName: Full=50S rib... 86 2e-15 tr|D5PUT9|D5PUT9_COREQ Tax_Id=525370 (rpmH)SubName: Full=50S rib... 85 3e-15 sp|P0A5W4|RL34_MYCTU Tax_Id=1773 (rpmH)RecName: Full=50S ribosom... 85 3e-15 sp|A5U9Q2|RL34_MYCTA Tax_Id=419947 (rpmH)RecName: Full=50S ribos... 85 3e-15 sp|C1AJ64|RL34_MYCBT Tax_Id=561275 (rpmH)RecName: Full=50S ribos... 85 3e-15 sp|P0A5W5|RL34_MYCBO Tax_Id=1765 (rpmH)RecName: Full=50S ribosom... 85 3e-15 sp|Q8FSU7|RL34_COREF Tax_Id=152794 (rpmH)RecName: Full=50S ribos... 85 3e-15 tr|C6DPF4|C6DPF4_MYCTK Tax_Id=478434 RecName: Full=50S ribosomal... 85 3e-15 tr|A5WUE5|A5WUE5_MYCTF Tax_Id=336982 RecName: Full=50S ribosomal... 85 3e-15 tr|A1KEG8|A1KEG8_MYCBP Tax_Id=410289 (rpmH_2)RecName: Full=50S r... 85 3e-15 tr|D6G6I8|D6G6I8_MYCTU Tax_Id=478435 SubName: Full=50S ribosomal... 85 3e-15 tr|D6FVB0|D6FVB0_MYCTU Tax_Id=611304 SubName: Full=50S ribosomal... 85 3e-15 tr|D6FC52|D6FC52_MYCTU Tax_Id=611303 SubName: Full=50S ribosomal... 85 3e-15 tr|D6EZT5|D6EZT5_MYCTU Tax_Id=611302 SubName: Full=LSU ribosomal... 85 3e-15 tr|D5ZB33|D5ZB33_MYCTU Tax_Id=537210 SubName: Full=50S ribosomal... 85 3e-15 tr|D5Z9F3|D5Z9F3_MYCTU Tax_Id=537209 SubName: Full=50S ribosomal... 85 3e-15 tr|D5YYK2|D5YYK2_MYCTU Tax_Id=515616 SubName: Full=50S ribosomal... 85 3e-15 tr|D5YM30|D5YM30_MYCTU Tax_Id=520140 SubName: Full=RpmH;[Mycobac... 85 3e-15 tr|A2VMU3|A2VMU3_MYCTU Tax_Id=348776 RecName: Full=50S ribosomal... 85 3e-15 >sp|P0C562|RL34_MYCSM Tax_Id=1772 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium smegmatis] Length = 47 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/47 (100%), Positives = 47/47 (100%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 >sp|A0R7K0|RL34_MYCS2 Tax_Id=246196 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium smegmatis] Length = 47 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/47 (100%), Positives = 47/47 (100%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 >sp|A0PX71|RL34_MYCUA Tax_Id=362242 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium ulcerans] Length = 47 Score = 89.7 bits (221), Expect = 1e-16 Identities = 44/47 (93%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 >sp|B2HNT9|RL34_MYCMM Tax_Id=216594 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium marinum] Length = 47 Score = 89.7 bits (221), Expect = 1e-16 Identities = 44/47 (93%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 >sp|Q1B0S1|RL34_MYCSS Tax_Id=164756 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/47 (91%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|A1U8R9|RL34_MYCSK Tax_Id=189918 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/47 (91%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|A3Q8S5|RL34_MYCSJ Tax_Id=164757 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/47 (91%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|Q9L7L8|RL34_MYCPA Tax_Id=1770 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium paratuberculosis] Length = 47 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/47 (91%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGRRAL+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA 47 >sp|A0QND5|RL34_MYCA1 Tax_Id=243243 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium avium] Length = 47 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/47 (91%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGRRAL+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA 47 >tr|D5UPA2|D5UPA2_TSUPA Tax_Id=521096 SubName: Full=Ribosomal protein L34;[Tsukamurella paurometabola DSM 20162] Length = 47 Score = 88.2 bits (217), Expect = 3e-16 Identities = 43/47 (91%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV++RRSKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSSRRSKGRAKLTA 47 >sp|P46386|RL34_MYCLE Tax_Id=1769 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium leprae] Length = 47 Score = 87.8 bits (216), Expect = 4e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >sp|B8ZTN7|RL34_MYCLB Tax_Id=561304 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium leprae] Length = 47 Score = 87.8 bits (216), Expect = 4e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >sp|A1TI30|RL34_MYCVP Tax_Id=350058 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium vanbaalenii] Length = 47 Score = 87.4 bits (215), Expect = 5e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRA+VHGFRLRMRTRAGRAIV RR+KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA 47 >sp|A4T4T9|RL34_MYCGI Tax_Id=350054 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium gilvum] Length = 47 Score = 87.4 bits (215), Expect = 5e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRA+VHGFRLRMRTRAGRAIV RR+KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA 47 >sp|B1MN97|RL34_MYCA9 Tax_Id=561007 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium abscessus] Length = 47 Score = 87.4 bits (215), Expect = 5e-16 Identities = 42/47 (89%), Positives = 43/47 (91%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRAR HGFRLRMRTRAGRAI+A RR KGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARTHGFRLRMRTRAGRAIIAGRRRKGRRELTA 47 >sp|Q0SAG8|RL34_RHOSR Tax_Id=101510 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus sp.] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRESLTA 47 >sp|C1B7S6|RL34_RHOOB Tax_Id=632772 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus opacus] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRESLTA 47 >sp|Q6M1C1|RL34_CORGL Tax_Id=1718 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glutamicum] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 43/47 (91%), Positives = 43/47 (91%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVA RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 47 >sp|A4QIE6|RL34_CORGB Tax_Id=340322 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glutamicum] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 43/47 (91%), Positives = 43/47 (91%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVA RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 47 >tr|D5P9Z8|D5P9Z8_9MYCO Tax_Id=525368 (rpmH)SubName: Full=50S ribosomal protein L34;[Mycobacterium parascrofulaceum ATCC BAA-614] Length = 92 Score = 86.3 bits (212), Expect = 1e-15 Identities = 41/47 (87%), Positives = 46/47 (97%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRRAL+A Sbjct: 46 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRALSA 92 >sp|Q4JSC1|RL34_CORJK Tax_Id=306537 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium jeikeium] Length = 47 Score = 85.9 bits (211), Expect = 2e-15 Identities = 41/47 (87%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR+KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRNKGRKSLTA 47 >sp|Q6NE95|RL34_CORDI Tax_Id=1717 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium diphtheriae] Length = 47 Score = 85.9 bits (211), Expect = 2e-15 Identities = 41/47 (87%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRAR HGFR+RMRTRAGRAIVA RR+KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRNKGRKSLTA 47 >tr|D0L9D2|D0L9D2_GORB4 Tax_Id=526226 RecName: Full=50S ribosomal protein L34;[Gordonia bronchialis] Length = 47 Score = 85.9 bits (211), Expect = 2e-15 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV +RR+KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVNSRRTKGRAKLTA 47 >tr|C8RVF8|C8RVF8_CORJE Tax_Id=525262 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium jeikeium ATCC 43734] Length = 47 Score = 85.9 bits (211), Expect = 2e-15 Identities = 41/47 (87%), Positives = 45/47 (95%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR+KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRNKGRKSLTA 47 >sp|C0ZVP8|RL34_RHOE4 Tax_Id=234621 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus erythropolis] Length = 47 Score = 85.5 bits (210), Expect = 2e-15 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRDSLTA 47 >sp|Q5YMR6|RL34_NOCFA Tax_Id=37329 (rpmH)RecName: Full=50S ribosomal protein L34;[Nocardia farcinica] Length = 47 Score = 85.5 bits (210), Expect = 2e-15 Identities = 42/47 (89%), Positives = 43/47 (91%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA 47 >tr|C3JLD6|C3JLD6_RHOER Tax_Id=596309 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus erythropolis SK121] Length = 47 Score = 85.5 bits (210), Expect = 2e-15 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRDSLTA 47 >tr|D5PUT9|D5PUT9_COREQ Tax_Id=525370 (rpmH)SubName: Full=50S ribosomal protein L34;[Rhodococcus equi ATCC 33707] Length = 47 Score = 85.1 bits (209), Expect = 3e-15 Identities = 42/47 (89%), Positives = 43/47 (91%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRAELTA 47 >sp|P0A5W4|RL34_MYCTU Tax_Id=1773 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|A5U9Q2|RL34_MYCTA Tax_Id=419947 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|C1AJ64|RL34_MYCBT Tax_Id=561275 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|P0A5W5|RL34_MYCBO Tax_Id=1765 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|Q8FSU7|RL34_COREF Tax_Id=152794 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium efficiens] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 42/47 (89%), Positives = 42/47 (89%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 MAKGKRTFQPNNRRRARVHGFR RMRTRAGRAIVA RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVAARRRKGREKLTA 47 >tr|C6DPF4|C6DPF4_MYCTK Tax_Id=478434 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A5WUE5|A5WUE5_MYCTF Tax_Id=336982 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A1KEG8|A1KEG8_MYCBP Tax_Id=410289 (rpmH_2)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D6G6I8|D6G6I8_MYCTU Tax_Id=478435 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis KZN 605] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D6FVB0|D6FVB0_MYCTU Tax_Id=611304 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis K85] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D6FC52|D6FC52_MYCTU Tax_Id=611303 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis CPHL_A] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D6EZT5|D6EZT5_MYCTU Tax_Id=611302 SubName: Full=LSU ribosomal protein L34;[Mycobacterium tuberculosis T46] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D5ZB33|D5ZB33_MYCTU Tax_Id=537210 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis T17] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D5Z9F3|D5Z9F3_MYCTU Tax_Id=537209 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis GM 1503] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D5YYK2|D5YYK2_MYCTU Tax_Id=515616 SubName: Full=50S ribosomal protein L34 rpmH;[Mycobacterium tuberculosis 02_1987] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|D5YM30|D5YM30_MYCTU Tax_Id=520140 SubName: Full=RpmH;[Mycobacterium tuberculosis EAS054] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A2VMU3|A2VMU3_MYCTU Tax_Id=348776 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis C] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 M KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV++RR KGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 Database: Amellifera_nr Posted date: Jul 23, 2010 5:10 AM Number of letters in database: 4,236,830,644 Number of sequences in database: 12,507,864 Lambda K H 0.331 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 12507864 Number of Hits to DB: 296,256,914 Number of extensions: 6354990 Number of successful extensions: 18469 Number of sequences better than 10.0: 2022 Number of HSP's gapped: 18526 Number of HSP's successfully gapped: 2022 Length of query: 47 Length of database: 4,236,830,644 Length adjustment: 20 Effective length of query: 27 Effective length of database: 3,986,673,364 Effective search space: 107640180828 Effective search space used: 107640180828 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 75 (33.5 bits)