BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0002 (402 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA pol... 778 0.0 tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA pol... 771 0.0 sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polyme... 681 0.0 tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Myc... 668 0.0 sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polyme... 667 0.0 tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 667 0.0 tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA pol... 667 0.0 tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 667 0.0 tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 667 0.0 tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 667 0.0 sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polyme... 664 0.0 tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA pol... 664 0.0 tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA p... 664 0.0 tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA pol... 652 0.0 sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polyme... 644 0.0 tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putativ... 644 0.0 tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 630 e-179 tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 630 e-178 tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 630 e-178 tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 627 e-177 tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 617 e-174 sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polyme... 616 e-174 tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA pol... 616 e-174 tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA pol... 568 e-160 tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-dir... 519 e-145 tr|C2AIV3|C2AIV3_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 518 e-145 tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA pol... 516 e-144 tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA pol... 511 e-143 tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA pol... 511 e-143 tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative... 509 e-142 tr|D0LA34|D0LA34_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 496 e-138 tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putativ... 448 e-124 tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA pol... 445 e-123 tr|C6WCF5|C6WCF5_ACTMD Tax_Id=446462 SubName: Full=DNA polymeras... 438 e-121 tr|Q9ZB90|Q9ZB90_MYCAV Tax_Id=1764 (dnaN)SubName: Full=DnaN; Fla... 432 e-119 tr|C7MRN4|C7MRN4_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 431 e-119 tr|Q4JYF6|Q4JYF6_CORJK Tax_Id=306537 (dnaN)SubName: Full=DNA pol... 422 e-116 tr|C8RVG0|C8RVG0_CORJE Tax_Id=525262 (dnaN)SubName: Full=DNA pol... 422 e-116 tr|B1VDX3|B1VDX3_CORU7 Tax_Id=504474 SubName: Full=DNA polymeras... 417 e-114 tr|C4LGB1|C4LGB1_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras... 413 e-113 tr|Q0GNI3|Q0GNI3_9ZZZZ Tax_Id=155900 SubName: Full=Smu19B; Flags... 408 e-112 tr|Q8FUL5|Q8FUL5_COREF Tax_Id=152794 SubName: Full=Putative DNA ... 407 e-111 tr|C8NRV4|C8NRV4_COREF Tax_Id=196164 (dnaN)SubName: Full=DNA pol... 407 e-111 tr|C0U7U5|C0U7U5_9ACTO Tax_Id=526225 SubName: Full=DNA polymeras... 406 e-111 tr|C5V917|C5V917_9CORY Tax_Id=553207 (dnaN)SubName: Full=DNA pol... 402 e-110 tr|C0E1N3|C0E1N3_9CORY Tax_Id=566549 SubName: Full=Putative unch... 402 e-110 tr|Q8NUD6|Q8NUD6_CORGL Tax_Id=1718 (dnaN)SubName: Full=DNA polym... 400 e-109 tr|A4Q9S1|A4Q9S1_CORGB Tax_Id=340322 SubName: Full=Putative unch... 400 e-109 tr|C8XHU9|C8XHU9_NAKMY Tax_Id=479431 SubName: Full=DNA polymeras... 384 e-105 tr|C2CSS7|C2CSS7_CORST Tax_Id=525268 SubName: Full=DNA polymeras... 384 e-104 >tr|B2HI47|B2HI47_MYCMM Tax_Id=216594 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium marinum] Length = 402 Score = 778 bits (2009), Expect = 0.0 Identities = 402/402 (100%), Positives = 402/402 (100%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD Sbjct: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT Sbjct: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA Sbjct: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL Sbjct: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG Sbjct: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >tr|A0PKB3|A0PKB3_MYCUA Tax_Id=362242 (dnaN)SubName: Full=DNA polymerase III (Beta chain) DnaN;[Mycobacterium ulcerans] Length = 402 Score = 771 bits (1992), Expect = 0.0 Identities = 399/402 (99%), Positives = 399/402 (99%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTRAGLTDLKFRLV ESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD Sbjct: 1 MDAATTRAGLTDLKFRLVPESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALP KPVDFYVDGNRVALTCGNARFSLPT Sbjct: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPKKPVDFYVDGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAI AGRDDTLPMLTGIRVEISGEKVVLAA Sbjct: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAITAGRDDTLPMLTGIRVEISGEKVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL Sbjct: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG Sbjct: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 >sp|Q9L7L6|DPO3B_MYCPA Tax_Id=1770 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium paratuberculosis] Length = 399 Score = 681 bits (1757), Expect = 0.0 Identities = 349/402 (86%), Positives = 377/402 (93%), Gaps = 3/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATT AGL+DLKFRLVRESFADAVSWVAK+LP+RPAVPVLSGVLL+G+DEGLTISGFD Sbjct: 1 MDAATTTAGLSDLKFRLVRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEIASPG+VLVSGRLLSDI RALPNKP+DFYVDGNRVAL CG+ARFSLPT Sbjct: 61 YEVSAEAQVAAEIASPGSVLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLPE+TGTLPA+LF+EAIGQVAIAAGRDDTLPMLTGIRVEISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPEETGTLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+A SPDIEAAVLVPAKTL EAA+ DGS+VRLSLGAG GVGKDGLL Sbjct: 181 TDRFRLAVRELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ +VAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 F++G LRLSAGADDVGRAEED+AV+FAG+PLTIAFNPTYL DGL S+ SERVSFGFTTPG Sbjct: 301 FSEGSLRLSAGADDVGRAEEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRPAS +D S P GPF+A+PTDYVYLLMPVRLPG Sbjct: 361 KPALLRPASDDD---SPPSGSGPFSALPTDYVYLLMPVRLPG 399 >tr|Q9EVN6|Q9EVN6_MYCTU Tax_Id=1773 (dnaN)SubName: Full=DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 668 bits (1724), Expect = 0.0 Identities = 346/402 (86%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPGTVLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGTVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >sp|Q50790|DPO3B_MYCTU Tax_Id=1773 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C6DQ77|C6DQ77_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase subunit III beta dnaN;[Mycobacterium tuberculosis] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5TY70|A5TY70_MYCTA Tax_Id=419947 (dnaN)SubName: Full=DNA polymerase III subunit beta DnaN;[Mycobacterium tuberculosis] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A5WI56|A5WI56_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III beta subunit dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A4KN34|A4KN34_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis str. Haarlem] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A2VMU4|A2VMU4_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Beta chain) dnaN (DNA nucleotidyltransferase);[Mycobacterium tuberculosis C] Length = 402 Score = 667 bits (1720), Expect = 0.0 Identities = 345/402 (85%), Positives = 364/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPVD +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >sp|O33914|DPO3B_MYCBO Tax_Id=1765 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 664 bits (1713), Expect = 0.0 Identities = 344/402 (85%), Positives = 363/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPV +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|C1AIZ9|C1AIZ9_MYCBT Tax_Id=561275 (dnaN)SubName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 664 bits (1713), Expect = 0.0 Identities = 344/402 (85%), Positives = 363/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPV +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A1KEE3|A1KEE3_MYCBP Tax_Id=410289 (dnaN_1)SubName: Full=DNA polymerase III subunit beta dnaN; EC=2.7.7.7;[Mycobacterium bovis] Length = 402 Score = 664 bits (1713), Expect = 0.0 Identities = 344/402 (85%), Positives = 363/402 (90%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATTR GLTDL FRL+RESFADAVSWVAKNLP RPAVPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEI SPG+VLVSGRLLSDITRALPNKPV +V+GNRVALTCGNARFSLPT Sbjct: 61 YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVGVHVEGNRVALTCGNARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYPTLPTLPE+TG LPAELF+EAI QVAIAAGRDDTLPMLTGIRVEI GE VVLAA Sbjct: 121 MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+A SPDIEAAVLVPAKTL EAAKA GS+VRLSLG G GVGKDGLL Sbjct: 181 TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG+GKRSTTRLLDAEFPKFRQLLP EHTAVA+ DVAEL EAIKLVALVADRGAQVRME Sbjct: 241 GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FADG +RLSAGADDVGRAEED+ V++AG+PLTIAFNPTYL DGL+SL SERVSFGFTT G Sbjct: 301 FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +DR V+G GPF AV TDYVYLLMPVRLPG Sbjct: 361 KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG 402 >tr|A0Q8R7|A0Q8R7_MYCA1 Tax_Id=243243 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium avium] Length = 382 Score = 652 bits (1681), Expect = 0.0 Identities = 333/385 (86%), Positives = 361/385 (93%), Gaps = 3/385 (0%) Query: 18 VRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAEIASPG 77 +RESFADAVSWVAK+LP+RPAVPVLSGVLL+G+DEGLTISGFDYEVSAE +V AEIASPG Sbjct: 1 MRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFDYEVSAEAQVAAEIASPG 60 Query: 78 TVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTLPEDTG 137 +VLVSGRLLSDI RALPNKP+DFYVDGNRVAL CG+ARFSLPTMAVEDYPTLPTLPE+TG Sbjct: 61 SVLVSGRLLSDIVRALPNKPIDFYVDGNRVALNCGSARFSLPTMAVEDYPTLPTLPEETG 120 Query: 138 TLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELTWNALS 197 TLPA+LF+EAIGQVAIAAGRDDTLPMLTGIRVEISG+ VVLAATDRFRLAVRELTW+A S Sbjct: 121 TLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAATDRFRLAVRELTWSAAS 180 Query: 198 PDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTRLLDAE 257 PDIEAAVLVPAKTL EAA+ DGS+VRLSLGAG GVGKDGLLGISG+GKRSTTRLLDAE Sbjct: 181 PDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGLLGISGNGKRSTTRLLDAE 240 Query: 258 FPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGADDVGR 317 FPKFRQLLPAEHTAVA+ +VAELTEAIKLVALVADRGAQVRMEF++G LRLSAGADDVGR Sbjct: 241 FPKFRQLLPAEHTAVATINVAELTEAIKLVALVADRGAQVRMEFSEGSLRLSAGADDVGR 300 Query: 318 AEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASAEDRIVSG 377 AEED+AV+FAG+PLTIAFNPTYL DGL S+ SERVSFGFTTPGKPALLRPAS +D S Sbjct: 301 AEEDLAVDFAGEPLTIAFNPTYLTDGLGSVRSERVSFGFTTPGKPALLRPASDDD---SP 357 Query: 378 PGDQGPFAAVPTDYVYLLMPVRLPG 402 P GPF+A+PTDYVYLLMPVRLPG Sbjct: 358 PSGSGPFSALPTDYVYLLMPVRLPG 382 >sp|P46387|DPO3B_MYCLE Tax_Id=1769 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 644 bits (1660), Expect = 0.0 Identities = 335/402 (83%), Positives = 357/402 (88%), Gaps = 3/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD A T G +DLKF L RESFA AVSWVAK LPTRP VPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEV+V AEIAS G+VLVSGRLLSDITRALPNKPV FYVDGNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLP++TGTLP+++F+EAIGQVAIAAGRD TLPMLTGIR+EISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+ LS D EA+VLVPAKTL E AKA TDGS V LSLGAG+GVGKDGL Sbjct: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ DVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 F DG+LRLSAGADDVGRAEED+AV F G+PLTIAFNP YL DGLAS+HSERVSFGFTTP Sbjct: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +D P GPF A+PTDYVYLLMPVRLPG Sbjct: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 >tr|B8ZTN9|B8ZTN9_MYCLB Tax_Id=561304 (dnaN)SubName: Full=Putative DNA polymerase III, [beta] subunit; EC=2.7.7.7;[Mycobacterium leprae] Length = 399 Score = 644 bits (1660), Expect = 0.0 Identities = 335/402 (83%), Positives = 357/402 (88%), Gaps = 3/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD A T G +DLKF L RESFA AVSWVAK LPTRP VPVLSGVLLTGSD GLTISGFD Sbjct: 1 MDLAKTNVGCSDLKFCLARESFASAVSWVAKYLPTRPTVPVLSGVLLTGSDSGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEV+V AEIAS G+VLVSGRLLSDITRALPNKPV FYVDGNRVALTCG+ARFSLPT Sbjct: 61 YEVSAEVQVAAEIASSGSVLVSGRLLSDITRALPNKPVHFYVDGNRVALTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLP++TGTLP+++F+EAIGQVAIAAGRD TLPMLTGIR+EISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPDETGTLPSDVFAEAIGQVAIAAGRDYTLPMLTGIRIEISGDTVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+ LS D EA+VLVPAKTL E AKA TDGS V LSLGAG+GVGKDGL Sbjct: 181 TDRFRLAVRELKWSVLSSDFEASVLVPAKTLVEVAKAGTDGSGVCLSLGAGVGVGKDGLF 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GISG GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ DVAELTEAIKLVALVADRGAQVRME Sbjct: 241 GISGGGKRSTTRLLDAEFPKFRQLLPAEHTAVATIDVAELTEAIKLVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 F DG+LRLSAGADDVGRAEED+AV F G+PLTIAFNP YL DGLAS+HSERVSFGFTTP Sbjct: 301 FGDGILRLSAGADDVGRAEEDLAVAFTGEPLTIAFNPNYLTDGLASVHSERVSFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 KPALLRP S +D P GPF A+PTDYVYLLMPVRLPG Sbjct: 361 KPALLRPTSNDD---VHPTHDGPFPALPTDYVYLLMPVRLPG 399 >tr|A3PSD8|A3PSD8_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 630 bits (1625), Expect = e-179 Identities = 323/402 (80%), Positives = 356/402 (88%), Gaps = 4/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD T AG TDLKFRLVRE FADAV+WVA+NLPTRP VPVL+GVLLTG D+GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEVRV AEIASPG+VLVSGRLLSDIT+ALP KPVD V+G RV+LTCG+ARFSLPT Sbjct: 61 YEVSAEVRVAAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYP LPTLP++TG + A+LF+EAIGQVA+AAGRDDTLPMLTGIRVEI+GE VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+ SPD+EAAVLVPAKTL EAAKA TDG++V L+LGAG VGK+GLL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GI +GKRSTTRLLDAEFPKFRQLLP+EHTAVA+ VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FAD +LRLSAGADDVGRAEED+AV F+G+PLTIAFNPTYL DGL SLHSERV+FGFTTP Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA+LRPA ED G GPF A+ TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT----GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|Q1BG60|Q1BG60_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 630 bits (1624), Expect = e-178 Identities = 323/402 (80%), Positives = 356/402 (88%), Gaps = 4/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD T AG TDLKFRLVRE FADAV+WVA+NLPTRP VPVL+GVLLTG D+GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEVRV AEIASPG+VLVSGRLLSDIT+ALP KPVD V+G RV+LTCG+ARFSLPT Sbjct: 61 YEVSAEVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYP LPTLP++TG + A+LF+EAIGQVA+AAGRDDTLPMLTGIRVEI+GE VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+ SPD+EAAVLVPAKTL EAAKA TDG++V L+LGAG VGK+GLL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GI +GKRSTTRLLDAEFPKFRQLLP+EHTAVA+ VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FAD +LRLSAGADDVGRAEED+AV F+G+PLTIAFNPTYL DGL SLHSERV+FGFTTP Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA+LRPA ED G GPF A+ TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT----GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A1U8S1|A1U8S1_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 398 Score = 630 bits (1624), Expect = e-178 Identities = 323/402 (80%), Positives = 356/402 (88%), Gaps = 4/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD T AG TDLKFRLVRE FADAV+WVA+NLPTRP VPVL+GVLLTG D+GLTISGFD Sbjct: 1 MDVVPTTAGHTDLKFRLVREDFADAVAWVARNLPTRPTVPVLAGVLLTGDDDGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEVRV AEIASPG+VLVSGRLLSDIT+ALP KPVD V+G RV+LTCG+ARFSLPT Sbjct: 61 YEVSAEVRVVAEIASPGSVLVSGRLLSDITKALPAKPVDVSVEGTRVSLTCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYP LPTLP++TG + A+LF+EAIGQVA+AAGRDDTLPMLTGIRVEI+GE VVLAA Sbjct: 121 MAVEDYPALPTLPDETGVIGADLFAEAIGQVAVAAGRDDTLPMLTGIRVEITGESVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+ SPD+EAAVLVPAKTL EAAKA TDG++V L+LGAG VGK+GLL Sbjct: 181 TDRFRLAVRELTWSTSSPDVEAAVLVPAKTLAEAAKAGTDGTDVHLALGAGSAVGKEGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GI +GKRSTTRLLDAEFPKFRQLLP+EHTAVA+ VAELTEAIK VALVADRGAQVRME Sbjct: 241 GIRSEGKRSTTRLLDAEFPKFRQLLPSEHTAVATIGVAELTEAIKRVALVADRGAQVRME 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FAD +LRLSAGADDVGRAEED+AV F+G+PLTIAFNPTYL DGL SLHSERV+FGFTTP Sbjct: 301 FADDVLRLSAGADDVGRAEEDLAVAFSGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA+LRPA ED G GPF A+ TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPAGDEDT----GGGAGPFPALQTDYVYLLMPVRLPG 398 >tr|A1T103|A1T103_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 398 Score = 627 bits (1616), Expect = e-177 Identities = 319/397 (80%), Positives = 354/397 (89%), Gaps = 3/397 (0%) Query: 6 TRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSA 65 T AGLTDLKFRL RE FADAV+WVA+NLP+RP VPVL+GVLLTGSDEGLTISGFDYEVSA Sbjct: 5 TTAGLTDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTISGFDYEVSA 64 Query: 66 EVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVED 125 EV++PAEIASPG+VLVSGRLLSDI RALP KPVD V+G RV+LTCG+ARFSLPTM VED Sbjct: 65 EVQIPAEIASPGSVLVSGRLLSDIVRALPAKPVDVSVEGTRVSLTCGSARFSLPTMPVED 124 Query: 126 YPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 185 YPTLPTLP++TG + ++LF+EAIGQVA+AAGRDDTLPMLTGIRVEISGEKVVLAATDRFR Sbjct: 125 YPTLPTLPDETGVVSSDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAATDRFR 184 Query: 186 LAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGD 245 LAVRELTW+ + +EAAVLVPAKTL EAAKA TDG+EV L+LGAG VGK+GLLGI Sbjct: 185 LAVRELTWSTGAAGVEAAVLVPAKTLAEAAKAGTDGNEVHLALGAGPSVGKEGLLGIRSK 244 Query: 246 GKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGM 305 GKRSTTRLLDAEFPKFRQLLP EHTA+A+ VAELTEAIK VALVADRGAQVRMEFADG+ Sbjct: 245 GKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRMEFADGV 304 Query: 306 LRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALL 365 LRLSAGADDVGRAEED+ VEF+G PLTIAFNPTYL DGL+SLH+ERV+FGFTTP +PA+L Sbjct: 305 LRLSAGADDVGRAEEDLPVEFSGDPLTIAFNPTYLTDGLSSLHAERVTFGFTTPSRPAVL 364 Query: 366 RPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 RPA+ +D G G GPF A TDYVYLLMPVRLPG Sbjct: 365 RPAAEDD---GGAGGSGPFPAAQTDYVYLLMPVRLPG 398 >tr|A4T4T7|A4T4T7_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 398 Score = 617 bits (1590), Expect = e-174 Identities = 316/402 (78%), Positives = 356/402 (88%), Gaps = 4/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 M+ ATT AGL+DLKFRL RE FADAV+WVA+NLP+RP VPVL+GVLLTGSDEGLT+SGFD Sbjct: 1 MNVATT-AGLSDLKFRLTREDFADAVAWVARNLPSRPTVPVLAGVLLTGSDEGLTVSGFD 59 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAEV++PAEIASPG+VLVSGRLLSDI R+LP KPVD V+G RV+LTCG+ARFSLPT Sbjct: 60 YEVSAEVQIPAEIASPGSVLVSGRLLSDIVRSLPAKPVDVSVEGTRVSLTCGSARFSLPT 119 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLP++TG + A+LF+EAIGQVA+AAGRDDTLPMLTGIRVEISGEKVVLAA Sbjct: 120 MAVEDYPTLPTLPDETGVVSADLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGEKVVLAA 179 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+A + +EAAVLVPAKTL EAAKA TDG+EV L+LG G VGK+GLL Sbjct: 180 TDRFRLAVRELTWSAGAAGVEAAVLVPAKTLAEAAKAGTDGTEVHLALGQGPTVGKEGLL 239 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GI GKRSTTRLLDAEFPKFRQLLP EHTA+A+ VAELTEAIK VALVADRGAQVRME Sbjct: 240 GIRSKGKRSTTRLLDAEFPKFRQLLPTEHTAIATIGVAELTEAIKRVALVADRGAQVRME 299 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 FAD +LRLSAGADDVGRAEED+ V+F+G PLTIAFNP+YL DGL SLH+ERV+FGFTTP Sbjct: 300 FADDVLRLSAGADDVGRAEEDLPVQFSGDPLTIAFNPSYLTDGLGSLHAERVTFGFTTPS 359 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA+LRPA +D +G GP+ A TDYVYLLMPVRLPG Sbjct: 360 RPAVLRPAGDDDGSAAG---SGPYPAAQTDYVYLLMPVRLPG 398 >sp|P52851|DPO3B_MYCSM Tax_Id=1772 (dnaN)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 616 bits (1588), Expect = e-174 Identities = 313/399 (78%), Positives = 352/399 (88%), Gaps = 3/399 (0%) Query: 4 ATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEV 63 ATT AGLTDLKFR+VRE FADAV+WVA++LPTRP +PVL+GVLLTG+DEGLTISGFDYEV Sbjct: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 Query: 64 SAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAV 123 SAEV+V AEIAS G+VLVSGRLLSDIT+ALP KPV+ V+G RV+LTCG+ARFSLPT+AV Sbjct: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 Query: 124 EDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDR 183 EDYP LP LPE+TG + ++LF+EAIGQVA+AAGRDDTLPMLTGIRVEISGE VVLAATDR Sbjct: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 Query: 184 FRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGIS 243 FRLAVRELTW + D+EAAVLVPAKTL EAAKA TDG++V L+LG+G VGKDGLLGI Sbjct: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 Query: 244 GDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFAD 303 +GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ VAELTEAIK VALVADRGAQ+RMEF+D Sbjct: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 Query: 304 GMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPA 363 L+LSAGADDVGRAEED+ V+FAG+PLTIAFNPTYL DGL SLHSERV+FGFTTP +PA Sbjct: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 Query: 364 LLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +LRPA +D G GPF A TDYVYLLMPVRLPG Sbjct: 362 VLRPAGEDD---GANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|A0QND6|A0QND6_MYCS2 Tax_Id=246196 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 397 Score = 616 bits (1588), Expect = e-174 Identities = 313/399 (78%), Positives = 352/399 (88%), Gaps = 3/399 (0%) Query: 4 ATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEV 63 ATT AGLTDLKFR+VRE FADAV+WVA++LPTRP +PVL+GVLLTG+DEGLTISGFDYEV Sbjct: 2 ATTTAGLTDLKFRVVREDFADAVAWVARSLPTRPTIPVLAGVLLTGTDEGLTISGFDYEV 61 Query: 64 SAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAV 123 SAEV+V AEIAS G+VLVSGRLLSDIT+ALP KPV+ V+G RV+LTCG+ARFSLPT+AV Sbjct: 62 SAEVKVSAEIASAGSVLVSGRLLSDITKALPAKPVEVSVEGTRVSLTCGSARFSLPTLAV 121 Query: 124 EDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDR 183 EDYP LP LPE+TG + ++LF+EAIGQVA+AAGRDDTLPMLTGIRVEISGE VVLAATDR Sbjct: 122 EDYPALPALPEETGVIASDLFAEAIGQVAVAAGRDDTLPMLTGIRVEISGESVVLAATDR 181 Query: 184 FRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGIS 243 FRLAVRELTW + D+EAAVLVPAKTL EAAKA TDG++V L+LG+G VGKDGLLGI Sbjct: 182 FRLAVRELTWVTTAGDVEAAVLVPAKTLAEAAKAGTDGNQVHLALGSGASVGKDGLLGIR 241 Query: 244 GDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFAD 303 +GKRSTTRLLDAEFPKFRQLLPAEHTAVA+ VAELTEAIK VALVADRGAQ+RMEF+D Sbjct: 242 SEGKRSTTRLLDAEFPKFRQLLPAEHTAVATIGVAELTEAIKRVALVADRGAQIRMEFSD 301 Query: 304 GMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPA 363 L+LSAGADDVGRAEED+ V+FAG+PLTIAFNPTYL DGL SLHSERV+FGFTTP +PA Sbjct: 302 DTLKLSAGADDVGRAEEDLPVDFAGEPLTIAFNPTYLTDGLGSLHSERVTFGFTTPSRPA 361 Query: 364 LLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +LRPA +D G GPF A TDYVYLLMPVRLPG Sbjct: 362 VLRPAGEDD---GANGGSGPFPAAKTDYVYLLMPVRLPG 397 >tr|B1MDH7|B1MDH7_MYCA9 Tax_Id=561007 (dnaN)SubName: Full=DNA polymerase III, beta subunit (DnaN);[Mycobacterium abscessus] Length = 399 Score = 568 bits (1463), Expect = e-160 Identities = 284/402 (70%), Positives = 338/402 (84%), Gaps = 3/402 (0%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MD A+ A T LKFR+ R+ FAD+V+WVA++LP+RP VPVL+GVLLT D GLT+SGFD Sbjct: 1 MDLASPTAADTSLKFRVARDDFADSVAWVARSLPSRPTVPVLAGVLLTAHDTGLTLSGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSA+V+VPAE+A+ G LVSGRLLSDITR+LPNKPVD ++G R+ ++CG+A+FSLP+ Sbjct: 61 YEVSAQVKVPAEVAAAGNALVSGRLLSDITRSLPNKPVDVALEGTRLLISCGSAKFSLPS 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYP LP+LPE+TG L A++FSEAIGQVA+AAG+DDTLPMLTGIRVEI+G+ VVLAA Sbjct: 121 MPVEDYPALPSLPEETGALGADVFSEAIGQVAVAAGKDDTLPMLTGIRVEINGDTVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W + S + AAVLVPAKTL EAAK+ + GS+V+L+LGAG +G +GLL Sbjct: 181 TDRFRLAVRELNWTSGSGETSAAVLVPAKTLSEAAKSASSGSDVQLALGAGSAIGSEGLL 240 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 GI DGKRSTTRLLDAEFPKFRQLLP EHTA+A+ ++EL EAIK VALVADRGAQ+R+E Sbjct: 241 GIVSDGKRSTTRLLDAEFPKFRQLLPTEHTALATIAISELVEAIKRVALVADRGAQIRLE 300 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 F G+LRLSAGADDVGRAEE++ VEF G+PLTIAFNPTYL DGL SLHS RV+FGFTTP Sbjct: 301 FEPGLLRLSAGADDVGRAEEELEVEFVGEPLTIAFNPTYLTDGLGSLHSNRVTFGFTTPS 360 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA+LRPA + S P GPF A TDYVYLLMPVRLPG Sbjct: 361 RPAVLRPADDDQ---SSPEGSGPFTAAQTDYVYLLMPVRLPG 399 >tr|Q0SAG6|Q0SAG6_RHOSR Tax_Id=101510 (dnaN)SubName: Full=DNA-directed DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 394 Score = 519 bits (1337), Expect = e-145 Identities = 267/395 (67%), Positives = 321/395 (81%), Gaps = 5/395 (1%) Query: 10 LTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRV 69 L LKFR+ RE FAD+V+WVA++LP+RP VPVL GVLL +++GLT+SGFDYEVSA+VRV Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRV 62 Query: 70 PAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTL 129 AE+ S G VLVSG+LL+DIT++LPNKPVD ++G RV +TCG+A+FSLPTM VEDYP L Sbjct: 63 AAEVGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQL 122 Query: 130 PTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVR 189 P LP+ TG++PA++FSEAI QVA+AAG+DDTLPMLTGIRVEI +VLAATDRFRLAVR Sbjct: 123 PQLPQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVR 182 Query: 190 ELTWNALSPDIEAAVLVPAKTLGEAAK--ANTDGSEVRLSLGAGMGVGKDGLLGISGDGK 247 EL W+ +PD AAVL+PAKTL E+AK A S V L+LG+G VG DGLLGI DG+ Sbjct: 183 ELEWSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGR 242 Query: 248 RSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLR 307 R+TTRLLDAEFPKFRQLLP+EHTA+A+ ++A L EAIK VALVA+RGAQVR++F+ L Sbjct: 243 RTTTRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLL 302 Query: 308 LSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRP 367 LSAG DD GRAEE + F G+PLTIAFNP YLIDGL+SLHSE+V FGFTTP +PA+LRP Sbjct: 303 LSAGGDDAGRAEEGLNAVFQGEPLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRP 362 Query: 368 ASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 A+ ED I P D G FAA + Y YLLMPVRLPG Sbjct: 363 AT-EDEI--EPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|C2AIV3|C2AIV3_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 387 Score = 518 bits (1334), Expect = e-145 Identities = 261/390 (66%), Positives = 312/390 (80%), Gaps = 3/390 (0%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 +KFR+ E FA++V+WVA++LP+RP VPVL GVLLT D+GLT+SGFDYEVSA+VRV AE Sbjct: 1 MKFRVPHEEFAESVAWVARSLPSRPPVPVLGGVLLTAGDDGLTVSGFDYEVSAQVRVGAE 60 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 +A G VLVSGRLL+DIT+ALPNKPVD +D RVA++CG+A+FSLPTM VEDYP LP L Sbjct: 61 VADEGQVLVSGRLLADITKALPNKPVDVELDVTRVAISCGSAKFSLPTMPVEDYPQLPEL 120 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P+ TG + +F+EAI QVAIAAG+DDTLPMLTGIRVEI G++VVLAATDRFRLAVRE Sbjct: 121 PQQTGAIERSMFAEAISQVAIAAGKDDTLPMLTGIRVEIEGQRVVLAATDRFRLAVREFD 180 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTR 252 W S D++AAVLVPAKTL EAAK SEV ++LGAG VG DGLLG+ G +R+TTR Sbjct: 181 WQPQSGDVKAAVLVPAKTLSEAAKTFAGDSEVGIALGAGSAVGADGLLGVVGPDRRTTTR 240 Query: 253 LLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGA 312 LLDA+FPKFRQLLPA HTA+A+ ++A L EAIK VALVADRGAQVRMEF DG LRLSAG Sbjct: 241 LLDADFPKFRQLLPASHTAIATMEIAPLLEAIKRVALVADRGAQVRMEFGDGTLRLSAGG 300 Query: 313 DDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASAED 372 DD G+AEE++ +F G+PLTIAFNP YL DGLA++H++ V+FGFTTP +PA+LRP Sbjct: 301 DDAGKAEEELPADFQGEPLTIAFNPGYLQDGLAAIHTDSVTFGFTTPSRPAVLRPTVEN- 359 Query: 373 RIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 P D G F A + Y YLLMPVRLPG Sbjct: 360 --AFQPDDSGAFPAPQSAYTYLLMPVRLPG 387 >tr|C1B7S8|C1B7S8_RHOOB Tax_Id=632772 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 394 Score = 516 bits (1329), Expect = e-144 Identities = 264/395 (66%), Positives = 319/395 (80%), Gaps = 5/395 (1%) Query: 10 LTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRV 69 L LKFR+ RE FAD+V+WVA++LP+RP VPVL GVLL +++GLT+SGFDYEVSA+VRV Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEQGLTVSGFDYEVSAQVRV 62 Query: 70 PAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTL 129 AE+ S G VLVSG+LL+DIT++LPNKPVD ++G RV +TCG+A+FSLPTM VEDYP L Sbjct: 63 AAEVGSAGQVLVSGKLLADITKSLPNKPVDVTLEGTRVLITCGSAKFSLPTMPVEDYPQL 122 Query: 130 PTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVR 189 P LP+ TG++PA++FSEAI QVA+AAG+DDTLPMLTGIRVEI +VLAATDRFRLAVR Sbjct: 123 PQLPQQTGSIPADVFSEAISQVAVAAGKDDTLPMLTGIRVEIERNAIVLAATDRFRLAVR 182 Query: 190 ELTWNALSPDIEAAVLVPAKTLGEAAK--ANTDGSEVRLSLGAGMGVGKDGLLGISGDGK 247 EL W+ +PD AAVL+PAKTL E+AK A S V L+LG+G VG DGLLGI DG+ Sbjct: 183 ELEWSPANPDTTAAVLIPAKTLSESAKTLAGDATSPVELALGSGSAVGNDGLLGIVNDGR 242 Query: 248 RSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLR 307 R+TTRLLDAEFPKFRQLLP+EHTA+A+ ++A L EAIK VALVA+RGAQVR++F+ L Sbjct: 243 RTTTRLLDAEFPKFRQLLPSEHTALATVEIAPLVEAIKRVALVAERGAQVRLQFSTEGLL 302 Query: 308 LSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRP 367 LSAG DD GRAEE + F G+ LTIAFNP YLIDGL+SLHSE+V FGFTTP +PA+LRP Sbjct: 303 LSAGGDDAGRAEEGLNAVFQGESLTIAFNPGYLIDGLSSLHSEQVLFGFTTPSRPAVLRP 362 Query: 368 ASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 A+ E+ P D G FAA + Y YLLMPVRLPG Sbjct: 363 ATEEE---IEPDDSGNFAAPESAYTYLLMPVRLPG 394 >tr|C0ZLE2|C0ZLE2_RHOE4 Tax_Id=234621 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 394 Score = 511 bits (1316), Expect = e-143 Identities = 262/396 (66%), Positives = 318/396 (80%), Gaps = 7/396 (1%) Query: 10 LTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRV 69 L LKFR+ RE FAD+V+WVA++LP+RP VPVL GVLL ++ GLT+SGFDYEVSA+VRV Sbjct: 3 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRV 62 Query: 70 PAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTL 129 A++ + G LVSGRLL+DIT++LPNKPVD ++G RV ++CG+A+FSLPTM VEDYP L Sbjct: 63 SADVTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQL 122 Query: 130 PTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVR 189 PTLP+ +G++P +LFSEAI QVA+AAG+DDTLPMLTGIRVEI +VLAATDRFRLAVR Sbjct: 123 PTLPQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVR 182 Query: 190 ELTWNALSPDIEAAVLVPAKTLGEAAK--ANTDGSEVRLSLGAGMGVGKDGLLGISGDGK 247 EL W +PD++AAVL+PAKTL E+AK A S V L+LG+G +G DGLLGI DG+ Sbjct: 183 ELEWTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGR 242 Query: 248 RSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEF-ADGML 306 R+TTRLLDAEFPKFRQLLPA+HTA+A+ +V L EAIK VALVA+RGAQVRM+F ADG+L Sbjct: 243 RTTTRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLL 302 Query: 307 RLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLR 366 LSAG DD GRAEE + F G+ LTIAFNP YLIDGL SLHSE V FGFTTP +PA+LR Sbjct: 303 -LSAGGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLR 361 Query: 367 PASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 PA+ E+ + G FAA ++Y YLLMPVRLPG Sbjct: 362 PAAEEEPTAD---ESGNFAAPSSEYTYLLMPVRLPG 394 >tr|C3JLE0|C3JLE0_RHOER Tax_Id=596309 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 403 Score = 511 bits (1316), Expect = e-143 Identities = 262/396 (66%), Positives = 318/396 (80%), Gaps = 7/396 (1%) Query: 10 LTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRV 69 L LKFR+ RE FAD+V+WVA++LP+RP VPVL GVLL ++ GLT+SGFDYEVSA+VRV Sbjct: 12 LGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQVRV 71 Query: 70 PAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTL 129 A++ + G LVSGRLL+DIT++LPNKPVD ++G RV ++CG+A+FSLPTM VEDYP L Sbjct: 72 SADVTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYPQL 131 Query: 130 PTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVR 189 PTLP+ +G++P +LFSEAI QVA+AAG+DDTLPMLTGIRVEI +VLAATDRFRLAVR Sbjct: 132 PTLPQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLAVR 191 Query: 190 ELTWNALSPDIEAAVLVPAKTLGEAAK--ANTDGSEVRLSLGAGMGVGKDGLLGISGDGK 247 EL W +PD++AAVL+PAKTL E+AK A S V L+LG+G +G DGLLGI DG+ Sbjct: 192 ELEWTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVNDGR 251 Query: 248 RSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEF-ADGML 306 R+TTRLLDAEFPKFRQLLPA+HTA+A+ +V L EAIK VALVA+RGAQVRM+F ADG+L Sbjct: 252 RTTTRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADGLL 311 Query: 307 RLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLR 366 LSAG DD GRAEE + F G+ LTIAFNP YLIDGL SLHSE V FGFTTP +PA+LR Sbjct: 312 -LSAGGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVLR 370 Query: 367 PASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 PA+ E+ + G FAA ++Y YLLMPVRLPG Sbjct: 371 PAAEEEPTAD---ESGNFAAPSSEYTYLLMPVRLPG 403 >tr|Q5Z3Z7|Q5Z3Z7_NOCFA Tax_Id=37329 (dnaN)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 386 Score = 509 bits (1311), Expect = e-142 Identities = 258/390 (66%), Positives = 312/390 (80%), Gaps = 4/390 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 +KFR+ RE FA++V+WVA++LP+RP VPVL GVLL +++GLT+SGFDYEVSA++RV AE Sbjct: 1 MKFRVAREDFAESVAWVARSLPSRPPVPVLGGVLLVANEDGLTVSGFDYEVSAQMRVAAE 60 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 +A PG VLVSGRLL+DIT+AL NKPVD VDG RV +TCG+A+FSLPTM VEDYP LP + Sbjct: 61 VAGPGEVLVSGRLLADITKALSNKPVDVSVDGTRVLITCGSAKFSLPTMPVEDYPQLPEV 120 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P+ TG L ++F+EA+GQVA+AAGRDDTLPMLTGIRVEI G +VVLAATDRFRLAVR + Sbjct: 121 PQQTGELSVDVFAEAVGQVAVAAGRDDTLPMLTGIRVEIEGSQVVLAATDRFRLAVRHIE 180 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTR 252 W PDIE AVL+PA+TL EAAK S+ + L G G G DGLLGI G+R+TTR Sbjct: 181 WTPARPDIETAVLIPARTLSEAAK-TLGASDAPVQLSLGTGAGSDGLLGIVNAGRRTTTR 239 Query: 253 LLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGA 312 LLDAEFPKFRQLLP EHT+VA+ VA LTEAIK VALVA+RGAQVR+EF+ L LSAG Sbjct: 240 LLDAEFPKFRQLLPKEHTSVATLAVAALTEAIKRVALVAERGAQVRLEFSTEGLLLSAGG 299 Query: 313 DDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASAED 372 DD GRAEE + +F G+PLTIAFNP YL+DGL++LH++RV+FGFTTP +PA+L PAS E+ Sbjct: 300 DDAGRAEEWLEADFRGEPLTIAFNPGYLVDGLSALHADRVTFGFTTPSRPAVLLPASEEE 359 Query: 373 RIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 D G FAA+ +Y YLLMPVRLPG Sbjct: 360 PQTL---DSGAFAALTGNYTYLLMPVRLPG 386 >tr|D0LA34|D0LA34_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Gordonia bronchialis] Length = 388 Score = 496 bits (1278), Expect = e-138 Identities = 254/392 (64%), Positives = 313/392 (79%), Gaps = 6/392 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 +KFR+ R+ FAD+V+WVA++LP+RP VPVL V+L G+D+GLTISGFDYEVSA+ + AE Sbjct: 1 MKFRVARDEFADSVAWVARSLPSRPPVPVLGCVVL-GADDGLTISGFDYEVSAQESIAAE 59 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 IA PG VLVSGRLL+DIT+ALPNKPVD +DG RVA+ CG+A+FSLPTM VEDYP LP + Sbjct: 60 IAEPGQVLVSGRLLADITKALPNKPVDVTLDGARVAIACGSAKFSLPTMPVEDYPQLPDV 119 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P +GT+P +LF+EAI QVAIAAGRDDTLPMLTG+RVEI G VVLAATDRFRLAVREL Sbjct: 120 PAISGTIPTQLFAEAISQVAIAAGRDDTLPMLTGVRVEIEGSTVVLAATDRFRLAVRELQ 179 Query: 193 WNALSPDIEAAVLVPAKTLGEAAK-ANTDGS-EVRLSLGAGMGVGKDGLLGISGDGKRST 250 W PD AVLVPAKTL E+AK A +G+ V L+ G G +G DG+LGI G+ KR+T Sbjct: 180 WEPTDPDTSGAVLVPAKTLSESAKTAGAEGTGVVSLAFGNGSAIGNDGILGILGETKRTT 239 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TRLLDAEFPKFRQLLPA HTA+A+ D A L EAIK VALVA+RGAQVR+EF +G + L+A Sbjct: 240 TRLLDAEFPKFRQLLPASHTAIATIDSAPLIEAIKRVALVAERGAQVRLEFGEGSVLLTA 299 Query: 311 GADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASA 370 G D+ G+AEE++ V+FAG+ LTIAFNP YL+DGL++++++ V FGFTTP +PA+LRP+S Sbjct: 300 GGDEAGKAEEELPVQFAGEALTIAFNPGYLLDGLSAINADTVDFGFTTPSRPAVLRPSSG 359 Query: 371 EDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + G FAA + + YLLMPVRLPG Sbjct: 360 EQ---PAADESGAFAAPESAFTYLLMPVRLPG 388 >tr|Q5YSM7|Q5YSM7_NOCFA Tax_Id=37329 (dnaN2)SubName: Full=Putative DNA polymerase III beta subunit;[Nocardia farcinica] Length = 381 Score = 448 bits (1152), Expect = e-124 Identities = 231/390 (59%), Positives = 288/390 (73%), Gaps = 11/390 (2%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 ++FR+ R ADA +WVA++LP+RP VPVL G L D+GLTIS FDYEVSA++R+ AE Sbjct: 3 IRFRVARGDLADAATWVARSLPSRPPVPVLGGAHLRADDDGLTISVFDYEVSAQMRIAAE 62 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 +A G VLVSG+LL+DIT+ALPNKPVD DG+RV + CG+A+FSLPTM VEDYP LP + Sbjct: 63 VAHDGEVLVSGKLLADITKALPNKPVDITFDGSRVLIACGSAKFSLPTMPVEDYPKLPDV 122 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P +G L A+LF+ A+ QVA+AAGRDDTLPMLTGIRVEI G +V LAATDR+RLAVR L Sbjct: 123 PARSGELAADLFATAVSQVAVAAGRDDTLPMLTGIRVEIDGAEVTLAATDRYRLAVRTLE 182 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTR 252 W+ P +E VLVPA+TL EA KA + RL++ D + G+ +R+TTR Sbjct: 183 WSPTDPSVETQVLVPARTLAEAVKALESAAPARLAI-------DDSMFGLVNARRRTTTR 235 Query: 253 LLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGA 312 LLDAEFPKFRQLLP EHT+VA+ V +L +AIK VALVA+RGAQVR+EF++ L LSAG Sbjct: 236 LLDAEFPKFRQLLPKEHTSVATVFVPDLVDAIKRVALVAERGAQVRLEFSEDGLLLSAGG 295 Query: 313 DDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASAED 372 DD GRAEE + EF G+PLTIAFNP YL+DGL +LHS V+ GFTTP +PA+L P+ Sbjct: 296 DDAGRAEEAVPAEFRGEPLTIAFNPGYLMDGLTALHSTSVTLGFTTPTRPAVLVPSGD-- 353 Query: 373 RIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 V G FAA+ +VY+LMPVR+PG Sbjct: 354 --VEVKESSGGFAALSGPFVYMLMPVRIPG 381 >tr|A4F5N3|A4F5N3_SACEN Tax_Id=405948 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 374 Score = 445 bits (1144), Expect = e-123 Identities = 228/392 (58%), Positives = 292/392 (74%), Gaps = 20/392 (5%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSD-EGLTISGFDYEVSAEVRVPA 71 +K R+ R+ ADAV+WVA++LP+RP VPVL GVLL S E LTISGFDYEVSA+V + A Sbjct: 1 MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDASSGEALTISGFDYEVSAQVTIDA 60 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 I S G LVSGRLL+DIT+ALPN+PV+ VDG+RV +TCG++RFSLPTM VEDYP LP Sbjct: 61 SIDSTGRTLVSGRLLADITKALPNRPVEITVDGSRVTITCGSSRFSLPTMPVEDYPELPA 120 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 +P+ G++P +LFSEA+ QVA+AAG+DDTLPMLTG+R+EI+ +++ + ATDRFRLA+RE Sbjct: 121 MPDHAGSVPGDLFSEAVSQVAVAAGKDDTLPMLTGVRMEINADRLTMVATDRFRLAMREF 180 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKA-NTDGSEVRLSLGAGMGVGKDGLLGISGDGKRST 250 TW + + +VLVPAKTL ++AK T G++V +SL +G DGLLG+SG+ +RST Sbjct: 181 TWEPGTTIEDTSVLVPAKTLSDSAKTLGTGGNKVEISLASG-----DGLLGLSGNSRRST 235 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TRLLDAEFPK+RQLLP+E A DVA L EAIK V+LVA+RG QVR+EF+D LRL+A Sbjct: 236 TRLLDAEFPKYRQLLPSESAVTAVVDVAPLVEAIKRVSLVAERGTQVRLEFSDAGLRLTA 295 Query: 311 GADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASA 370 G DD G AEE++ VE G+ LTIAFNP YL+DGL +L S+R FTT +PA+L+P Sbjct: 296 GGDDEGSAEEELPVELVGEALTIAFNPAYLLDGLGALKSDRAQMLFTTSNRPAVLKPVGE 355 Query: 371 EDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 + + G Y+YLLMPVRLPG Sbjct: 356 DGEVAEG-------------YLYLLMPVRLPG 374 >tr|C6WCF5|C6WCF5_ACTMD Tax_Id=446462 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Actinosynnema mirum] Length = 378 Score = 438 bits (1126), Expect = e-121 Identities = 225/396 (56%), Positives = 290/396 (73%), Gaps = 24/396 (6%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLT-----GSDEGLTISGFDYEVSAEV 67 +K R+ R+ ADAV+WVA++LP+RP VPVL GVLL GS + LT+SGFDYEVSA+ Sbjct: 1 MKIRVERDGLADAVAWVARSLPSRPPVPVLGGVLLDAGAEDGSGDALTVSGFDYEVSAQC 60 Query: 68 RVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYP 127 VPA I+ G LVSG+LL+DIT+ALPN PV+ VDG R+ +TCG+A+FSLPTM VEDYP Sbjct: 61 GVPATISDGGKALVSGKLLADITKALPNHPVEINVDGARMTITCGSAKFSLPTMPVEDYP 120 Query: 128 TLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLA 187 LP++P+ G LP E+F EA+ QVA+AAG+DDTLPMLTG+R+EI+ K+VL ATDRFRLA Sbjct: 121 ALPSMPQLAGELPGEVFGEAVAQVAVAAGKDDTLPMLTGVRLEIADGKLVLVATDRFRLA 180 Query: 188 VRELTWNALSPDIEAAVLVPAKTLGEAAKA-NTDGSEVRLSLGAGMGVGKDGLLGISGDG 246 +RE W + AVLVPAKTL ++AK G+++ LSL A DGLLG+SG+G Sbjct: 181 MREFEWTPDETLGDVAVLVPAKTLNDSAKTLGASGAKIELSLAA-----NDGLLGLSGNG 235 Query: 247 KRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGML 306 +R+TTRLLDA+FPK+RQLLP+EH+A A V L +AIK V+LVA+RG QVR+EF D L Sbjct: 236 RRTTTRLLDADFPKYRQLLPSEHSAAAIISVDTLVQAIKRVSLVAERGTQVRLEFGDAGL 295 Query: 307 RLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLR 366 +LSAG DD G AEE++ V++ G P+TIAFNPTYL++GL ++ + R FTTP +PALL+ Sbjct: 296 KLSAGGDDEGSAEEELPVDYQGDPVTIAFNPTYLLEGLQAVRTPRAHLSFTTPSRPALLK 355 Query: 367 PASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 P + + + G YVYLLMPVRLPG Sbjct: 356 PVNEDGEVAEG-------------YVYLLMPVRLPG 378 >tr|Q9ZB90|Q9ZB90_MYCAV Tax_Id=1764 (dnaN)SubName: Full=DnaN; Flags: Fragment;[Mycobacterium avium] Length = 258 Score = 432 bits (1111), Expect = e-119 Identities = 221/258 (85%), Positives = 239/258 (92%) Query: 1 MDAATTRAGLTDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD 60 MDAATT AGL+DLKFRLVRESFADAVSWVAK+LP+RPAVPVLSGVLL+G+DEGLTISGFD Sbjct: 1 MDAATTTAGLSDLKFRLVRESFADAVSWVAKSLPSRPAVPVLSGVLLSGTDEGLTISGFD 60 Query: 61 YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 YEVSAE +V AEIASPG+VLVSGRLLSDI RALPNKP+DFYVDGN+VAL CG+ARFSLPT Sbjct: 61 YEVSAEAQVAAEIASPGSVLVSGRLLSDIVRALPNKPIDFYVDGNQVALNCGSARFSLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 MAVEDYPTLPTLPE+TGTLPA+LF+EAIGQVAIAAGRDDTLPMLTGIRVEISG+ VVLAA Sbjct: 121 MAVEDYPTLPTLPEETGTLPADLFAEAIGQVAIAAGRDDTLPMLTGIRVEISGDTVVLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVRELTW+A SPDIEAAVLVPAKTL EAA+ DGS+VR G GKDGLL Sbjct: 181 TDRFRLAVRELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRCRWGRAQVCGKDGLL 240 Query: 241 GISGDGKRSTTRLLDAEF 258 GISG+GKRSTTRLLDAEF Sbjct: 241 GISGNGKRSTTRLLDAEF 258 >tr|C7MRN4|C7MRN4_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, beta subunit;[Saccharomonospora viridis] Length = 379 Score = 431 bits (1109), Expect = e-119 Identities = 226/397 (56%), Positives = 290/397 (73%), Gaps = 25/397 (6%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLL-TGSDEG-----LTISGFDYEVSAE 66 +K R+ R+ A+AV+WVA++LP+RP VPVL GVLL G D G LTISGFDYEVSA Sbjct: 1 MKIRVERDGLAEAVAWVARSLPSRPPVPVLGGVLLDAGGDSGDGADTLTISGFDYEVSAT 60 Query: 67 VRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDY 126 VP+ IA G LVSGRLL+DIT+ALP +PVD V+G RV++TCGNA+FSLPTM VEDY Sbjct: 61 AGVPSTIAEGGRTLVSGRLLADITKALPAQPVDISVEGARVSITCGNAKFSLPTMPVEDY 120 Query: 127 PTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRL 186 P LP PE G + + F++A+ QVA+AAG+DDTLPMLTG+RVEI+G + L ATDRFRL Sbjct: 121 PELPAQPELAGEVAGDAFAQAVAQVAVAAGKDDTLPMLTGMRVEITGSTLTLVATDRFRL 180 Query: 187 AVRELTWNALSPDIEAAVLVPAKTLGEAAKA-NTDGSEVRLSLGAGMGVGKDGLLGISGD 245 A+RE +W ++AVLVPA+TL +AAK+ + G+ V++ L G DGLLG+SG Sbjct: 181 AMREFSWQPAEGITDSAVLVPARTLADAAKSLGSAGTTVQIGLAGG-----DGLLGLSGG 235 Query: 246 GKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGM 305 GK +TTRL+DAEFP +RQLLP+++++ A V LTEAIK V+LVA+RG QVR+EF DG Sbjct: 236 GKFTTTRLIDAEFPPYRQLLPSDYSSRAILHVPALTEAIKRVSLVAERGTQVRLEFEDGS 295 Query: 306 LRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALL 365 LRL+AG DD G AEE++ V++ G+P+TIAFNP+YL DGL +LH+ER FTTP +PAL+ Sbjct: 296 LRLAAGGDDEGSAEEELPVDYEGEPVTIAFNPSYLADGLGALHAERAELTFTTPNRPALI 355 Query: 366 RPASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 +PA +V G Y+YLLMPVRLPG Sbjct: 356 KPADDNGEVVPG-------------YLYLLMPVRLPG 379 Score = 36.6 bits (83), Expect = 5.8 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 16/179 (8%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSG--VLLTGSDEGLTISG-FDYEVSAEVR 68 +L + ++FA AV+ VA +P+L+G V +TGS L + F + Sbjct: 128 ELAGEVAGDAFAQAVAQVAVAAGKDDTLPMLTGMRVEITGSTLTLVATDRFRLAMREFSW 187 Query: 69 VPAEIASPGTVLVSGRLLSDITRALPNKPVDFYV---DGNRVALTCGNARFSLPTMAVED 125 PAE + VLV R L+D ++L + + G+ + G +F+ + + Sbjct: 188 QPAEGITDSAVLVPARTLADAAKSLGSAGTTVQIGLAGGDGLLGLSGGGKFTTTRLIDAE 247 Query: 126 YP----TLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 +P LP+ L +EAI +V++ A R T +R+E + LAA Sbjct: 248 FPPYRQLLPSDYSSRAILHVPALTEAIKRVSLVAERG------TQVRLEFEDGSLRLAA 300 >tr|Q4JYF6|Q4JYF6_CORJK Tax_Id=306537 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium jeikeium] Length = 394 Score = 422 bits (1086), Expect = e-116 Identities = 210/394 (53%), Positives = 279/394 (70%), Gaps = 9/394 (2%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + F + ++ FA A+ WVA++LP++P P+L GV++ DEGL +SGFD EVS VR+ AE Sbjct: 6 VSFIVPKDDFASALGWVARSLPSKPTQPILRGVMIVADDEGLELSGFDREVSTRVRINAE 65 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG +LV+G+L SDI +LPNKP++ DG V L G ++F LP M +EDYP LP L Sbjct: 66 VNEPGKILVAGKLASDIVGSLPNKPINIEFDGTTVILKTGKSKFELPAMTIEDYPVLPEL 125 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE TGT+ LF+E+I QVA+AAGRDDTLPMLTG+ VEI GE V++ ATDRFRLAVR Sbjct: 126 PEVTGTIDPNLFAESISQVAVAAGRDDTLPMLTGVHVEIDGENVIMVATDRFRLAVRSFQ 185 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKA----NTDGSEVRLSLGAGMGVGKDGLLGISGDGKR 248 WN D +A +L+PA+TL + A++ NTD + +++G+G +G DGLLGIS + + Sbjct: 186 WNPAQADAQAKLLIPARTLADTARSMDPNNTD--PIEIAVGSGEDIGADGLLGISTESRH 243 Query: 249 STTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRL 308 +TTRLLDAEFPKFR LLP HTA+AS ++A L EAIK V++VA+R +Q+RM+F D + L Sbjct: 244 TTTRLLDAEFPKFRPLLPKTHTALASVEIAPLQEAIKRVSIVAERNSQIRMDFKDNTVTL 303 Query: 309 SAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPA 368 SAG DVG A E + FAG+PL IAFNP+YL +GLA++H+ RV FGFT +PA+L P Sbjct: 304 SAGGSDVGSATETLDCAFAGEPLVIAFNPSYLKEGLAAIHTPRVVFGFTMASRPAILLPD 363 Query: 369 SAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + +G FA TD+ YLLMPVRLPG Sbjct: 364 PGE---LPEADAEGNFATPETDFTYLLMPVRLPG 394 >tr|C8RVG0|C8RVG0_CORJE Tax_Id=525262 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734] Length = 394 Score = 422 bits (1086), Expect = e-116 Identities = 210/394 (53%), Positives = 279/394 (70%), Gaps = 9/394 (2%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + F + ++ FA A+ WVA++LP++P P+L GV++ DEGL +SGFD EVS VR+ AE Sbjct: 6 VSFIVPKDDFASALGWVARSLPSKPTQPILRGVMIVADDEGLELSGFDREVSTRVRINAE 65 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG +LV+G+L SDI +LPNKP++ DG V L G ++F LP M +EDYP LP L Sbjct: 66 VNEPGKILVAGKLASDIVGSLPNKPINIEFDGTTVILKTGKSKFELPAMTIEDYPVLPEL 125 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE TGT+ LF+E+I QVA+AAGRDDTLPMLTG+ VEI GE V++ ATDRFRLAVR Sbjct: 126 PEVTGTIDPNLFAESISQVAVAAGRDDTLPMLTGVHVEIDGENVIMVATDRFRLAVRSFQ 185 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKA----NTDGSEVRLSLGAGMGVGKDGLLGISGDGKR 248 WN D +A +L+PA+TL + A++ NTD + +++G+G +G DGLLGIS + + Sbjct: 186 WNPAQADAQAKLLIPARTLADTARSMDPNNTD--PIEIAVGSGEDIGADGLLGISTESRH 243 Query: 249 STTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRL 308 +TTRLLDAEFPKFR LLP HTA+AS ++A L EAIK V++VA+R +Q+RM+F D + L Sbjct: 244 TTTRLLDAEFPKFRPLLPKTHTALASVEIAPLQEAIKRVSIVAERNSQIRMDFKDNTVTL 303 Query: 309 SAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPA 368 SAG DVG A E + FAG+PL IAFNP+YL +GLA++H+ RV FGFT +PA+L P Sbjct: 304 SAGGSDVGSATETLDCAFAGEPLVIAFNPSYLKEGLAAIHTPRVVFGFTMASRPAILLPD 363 Query: 369 SAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + +G FA TD+ YLLMPVRLPG Sbjct: 364 PGE---LPEADAEGNFATPETDFTYLLMPVRLPG 394 >tr|B1VDX3|B1VDX3_CORU7 Tax_Id=504474 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium urealyticum] Length = 394 Score = 417 bits (1071), Expect = e-114 Identities = 209/393 (53%), Positives = 279/393 (70%), Gaps = 5/393 (1%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPA 71 ++ F + ++ FA A++WVA+ LPT+P P+L GV++ D+GL +SGFD EVS VRV A Sbjct: 5 NVSFSVAKDDFASALAWVARALPTKPTQPILRGVMILADDDGLELSGFDREVSTRVRVNA 64 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 + PG +LV+G+L SDI ALP K + G+ V + ++RF LP M +EDYP LP Sbjct: 65 NVDEPGRILVAGKLASDIVGALPGKEITMEYSGSTVLVRSSSSRFELPAMTIEDYPVLPD 124 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 +P TGT+ LF+EAI QVAIAAG+DDTLPMLTGIR+EI GE VVLAATDRFRLAVR Sbjct: 125 MPAVTGTIDPNLFTEAISQVAIAAGKDDTLPMLTGIRMEIEGENVVLAATDRFRLAVRSF 184 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKA--NTDGSEVRLSLGAGMGVGKDGLLGISGDGKRS 249 WN S D +A +L+PA+TL + A+ ++ + +++G+G +G DGLLGI D +R+ Sbjct: 185 QWNPASADAKAELLIPARTLADTARTLDHSLNDPIEIAIGSGEDIGADGLLGIVTDARRT 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLS 309 TTRLLDA+FPKFR LLPA H A+AS ++A L +AI+ V+LVA+R +Q+RM F + L LS Sbjct: 245 TTRLLDADFPKFRPLLPARHNAMASVEIAPLLDAIRRVSLVAERNSQIRMHFEESTLTLS 304 Query: 310 AGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 AG DVG+AEE + + G+PLTIAFNP YL DGL+++H+ERV FGFT P +PA+L PA Sbjct: 305 AGGSDVGQAEEVLNCAYHGEPLTIAFNPAYLKDGLSAIHTERVVFGFTQPSRPAILIPAP 364 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 AE + + G F T++ YLLMPVRLPG Sbjct: 365 AE---LPEAEEDGTFPDPETNFKYLLMPVRLPG 394 >tr|C4LGB1|C4LGB1_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium kroppenstedtii] Length = 394 Score = 413 bits (1062), Expect = e-113 Identities = 201/392 (51%), Positives = 282/392 (71%), Gaps = 5/392 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + FR+ ++ + A+SWVA++L ++P P+L GV++T DEGL ++GFDYEVS VR+ AE Sbjct: 6 VSFRVAKDDLSAALSWVARSLASKPTQPILRGVMMTADDEGLLLAGFDYEVSTRVRISAE 65 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG VLV+G+L +DI +LP+K V VDG +V +TCG + F LP M +EDYP LP+L Sbjct: 66 VLEPGQVLVAGKLANDIIGSLPHKDVAISVDGTKVHVTCGQSNFELPAMTIEDYPELPSL 125 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE+TG + +F+ AIGQVA AAG+DD++PMLTGI++E+ G+ VVLAATDRFRLAVRE T Sbjct: 126 PEETGHIDPHVFTAAIGQVASAAGKDDSMPMLTGIKMEVKGDNVVLAATDRFRLAVREFT 185 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKA--NTDGSEVRLSLGAGMGVGKDGLLGISGDGKRST 250 W SPD++A +L+PA+TL ++A+ ++L++GA VGKDGLLGI + +++T Sbjct: 186 WEPSSPDVDAEILIPARTLADSARTLDTRLNDPIQLAMGAAQDVGKDGLLGIVSENRQTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TRL+DA+FPKFR LLP H+++A ++A L +AI+ V+LVA+R AQV++EF++ L LSA Sbjct: 246 TRLIDADFPKFRPLLPKSHSSMAIVEIAPLLDAIRRVSLVAERNAQVKLEFSEDQLVLSA 305 Query: 311 GADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASA 370 G + G AEE + +FAG+PL IAFN YL +GLAS+ ++ V FGFT P +PA+L P Sbjct: 306 GGSEAGTAEETLPAQFAGEPLLIAFNANYLKEGLASIDTKNVVFGFTQPSRPAILIP--- 362 Query: 371 EDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + G F T + YLLMPVRLPG Sbjct: 363 EPETMPEQDSDGQFPTPSTYFTYLLMPVRLPG 394 >tr|Q0GNI3|Q0GNI3_9ZZZZ Tax_Id=155900 SubName: Full=Smu19B; Flags: Fragment;[uncultured organism] Length = 357 Score = 408 bits (1048), Expect = e-112 Identities = 210/362 (58%), Positives = 260/362 (71%), Gaps = 7/362 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 +KFR+ R+ ADAV+WVAK+LP+RP VPVL G+LL LT+SGFDYEVS + + Sbjct: 1 MKFRVARDDLADAVAWVAKSLPSRPPVPVLGGILLEVDGGTLTVSGFDYEVSTRAELSVD 60 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 G VLVSGRLLS+ITRALP KPVDF VDG+RV++ G+ARF+LPTM V+DYP LP + Sbjct: 61 AEDDGRVLVSGRLLSEITRALPAKPVDFAVDGSRVSIVGGSARFTLPTMPVDDYPPLPEM 120 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P +GT+ + +EA+ Q +AAGRDDTLPMLTGIRVEI G+K+ LAATDRFRLAVREL Sbjct: 121 PAGSGTVESAALAEAVAQSVVAAGRDDTLPMLTGIRVEIEGDKLTLAATDRFRLAVRELG 180 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTR 252 W +PD+ AVLVPA+TL +AAK + V ++LG DGLLG+ G+R+T R Sbjct: 181 WTPDTPDMSTAVLVPARTLSDAAKTLGGAASVIVALG-------DGLLGLQAGGRRTTVR 233 Query: 253 LLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGA 312 LLD EF K+R LLP+EHT V+EL EAI+ VALV DRG +RM+ DG+L L+AG Sbjct: 234 LLDVEFVKYRSLLPSEHTTTVDVPVSELVEAIRRVALVTDRGHHLRMQVTDGLLTLTAGG 293 Query: 313 DDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPASAED 372 DD G+AEE++ VE G L IAFNP YLIDGL LHSERV FTTP +PALL P ++ Sbjct: 294 DDEGKAEEELPVEADGAELLIAFNPGYLIDGLGVLHSERVRMAFTTPSRPALLLPMDSDG 353 Query: 373 RI 374 I Sbjct: 354 AI 355 >tr|Q8FUL5|Q8FUL5_COREF Tax_Id=152794 SubName: Full=Putative DNA polymerase III beta subunit;[Corynebacterium efficiens] Length = 394 Score = 407 bits (1046), Expect = e-111 Identities = 203/393 (51%), Positives = 278/393 (70%), Gaps = 5/393 (1%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPA 71 ++ FR+ RE +V WVA+NLPT+P PVL +L+T DEGL ++G+DYEVS VRV A Sbjct: 5 NVSFRVAREDLVTSVGWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYEVSTRVRVSA 64 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 E+A PG + V+G++LS+I LPNKPVDF +DG++V ++CG+A F LP++ ++DYP LP+ Sbjct: 65 EVAVPGRIAVAGKILSEIIGTLPNKPVDFRLDGSKVLVSCGSASFELPSIPLDDYPPLPS 124 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 LPE TG++ +LF+EA+ QVA AAGRDD+LPMLTG+ +EI G ++ LAATDRFRLA+R Sbjct: 125 LPERTGSINPKLFTEAVTQVASAAGRDDSLPMLTGVNMEIHGNQISLAATDRFRLALRTF 184 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKANTDG--SEVRLSLGAGMGVGKDGLLGISGDGKRS 249 W+ S IEA +L+PAKTL E A+ G E+ +++G G VG++GL GI D + S Sbjct: 185 EWDPASSGIEAKLLIPAKTLLENARTLDTGLNEEIGIAVGTGEQVGREGLFGIRTDNRES 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLS 309 TTR+LDA+FP + LLP EHTA+AS ++A L +A++ V+LVADR AQ+ MEF+DG + LS Sbjct: 245 TTRMLDADFPNIQPLLPKEHTAIASVEIAPLLDAVRRVSLVADRNAQIIMEFSDGQVILS 304 Query: 310 AGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 AG D G A+E + F G+ L IAFNP YL DGL+ + + R FGFT P +PA++ P Sbjct: 305 AGGSDAGHAQEVLPCAFTGKDLKIAFNPGYLKDGLSVIPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E ++G F T + YLLMPVRLPG Sbjct: 365 EE---FPEADERGVFQTPDTYFTYLLMPVRLPG 394 >tr|C8NRV4|C8NRV4_COREF Tax_Id=196164 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium efficiens YS-314] Length = 394 Score = 407 bits (1046), Expect = e-111 Identities = 203/393 (51%), Positives = 278/393 (70%), Gaps = 5/393 (1%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPA 71 ++ FR+ RE +V WVA+NLPT+P PVL +L+T DEGL ++G+DYEVS VRV A Sbjct: 5 NVSFRVAREDLVTSVGWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYEVSTRVRVSA 64 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 E+A PG + V+G++LS+I LPNKPVDF +DG++V ++CG+A F LP++ ++DYP LP+ Sbjct: 65 EVAVPGRIAVAGKILSEIIGTLPNKPVDFRLDGSKVLVSCGSASFELPSIPLDDYPPLPS 124 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 LPE TG++ +LF+EA+ QVA AAGRDD+LPMLTG+ +EI G ++ LAATDRFRLA+R Sbjct: 125 LPERTGSINPKLFTEAVTQVASAAGRDDSLPMLTGVNMEIHGNQISLAATDRFRLALRTF 184 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKANTDG--SEVRLSLGAGMGVGKDGLLGISGDGKRS 249 W+ S IEA +L+PAKTL E A+ G E+ +++G G VG++GL GI D + S Sbjct: 185 EWDPASSGIEAKLLIPAKTLLENARTLDTGLNEEIGIAVGTGEQVGREGLFGIRTDNRES 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLS 309 TTR+LDA+FP + LLP EHTA+AS ++A L +A++ V+LVADR AQ+ MEF+DG + LS Sbjct: 245 TTRMLDADFPNIQPLLPKEHTAIASVEIAPLLDAVRRVSLVADRNAQIIMEFSDGQVILS 304 Query: 310 AGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 AG D G A+E + F G+ L IAFNP YL DGL+ + + R FGFT P +PA++ P Sbjct: 305 AGGSDAGHAQEVLPCAFTGKDLKIAFNPGYLKDGLSVIPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E ++G F T + YLLMPVRLPG Sbjct: 365 EE---FPEADERGVFQTPDTYFTYLLMPVRLPG 394 >tr|C0U7U5|C0U7U5_9ACTO Tax_Id=526225 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Geodermatophilus obscurus DSM 43160] Length = 390 Score = 406 bits (1044), Expect = e-111 Identities = 212/395 (53%), Positives = 279/395 (70%), Gaps = 14/395 (3%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 +KFR+ RE ADAV+W A++LP RP+VPVL+G+LL L++SGFDYEVSA V + Sbjct: 5 MKFRVAREVLADAVAWTARSLPPRPSVPVLAGILLEVDGSQLSVSGFDYEVSARAEVDVQ 64 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 G VLV GRLL++ITRALP PVD +G R++++CGNARFSLPT+ VEDYP+LP + Sbjct: 65 ATESGRVLVPGRLLAEITRALPPHPVDLTAEGPRLSISCGNARFSLPTLPVEDYPSLPAM 124 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 P G + +++F+EA+GQVA+AAGRDDTLPMLTG+R+EI + V LAATDR+RLAVRE Sbjct: 125 PSSAGVVDSDVFAEAVGQVAVAAGRDDTLPMLTGVRLEIEDDLVTLAATDRYRLAVREFA 184 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTR 252 W +P + AVLVPA+TL +AAK T G E+ LSL +G +G+LG+SG +++TTR Sbjct: 185 WRPDTPGLTTAVLVPARTLADAAKTLTSGPEITLSLSSGS--SGEGILGLSGKDRQTTTR 242 Query: 253 LLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA-G 311 LLDAEF K+R ++P E + A+ V T+A K VALVA+RG +R EF G + L A G Sbjct: 243 LLDAEFVKYRAIMPNESASNATLPVGLFTDAAKRVALVAERGTPLRCEFTPGQVTLRAGG 302 Query: 312 ADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALL----RP 367 DD G+AEE VEF G+PLTI FNPT+L+DGLA++H+ R FT+P KPA+L P Sbjct: 303 TDDEGQAEERCDVEFEGEPLTIGFNPTFLLDGLAAVHTPRARMDFTSPLKPAVLSGVPEP 362 Query: 368 ASAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 A+ +D S P ++ P Y YL+MPVRLPG Sbjct: 363 AT-DDEAASRPAER------PGSYRYLIMPVRLPG 390 >tr|C5V917|C5V917_9CORY Tax_Id=553207 (dnaN)SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Corynebacterium matruchotii ATCC 14266] Length = 418 Score = 402 bits (1033), Expect = e-110 Identities = 205/394 (52%), Positives = 269/394 (68%), Gaps = 7/394 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + F + +E A AVSWVA+NLPT+PA PVL +L+T D+GL +GFDYEVS +VR+PAE Sbjct: 28 VSFVVAKEDLASAVSWVARNLPTKPAQPVLRAMLITADDDGLEFAGFDYEVSTKVRIPAE 87 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG + V+G+L++DIT LPNKPV+ +VDG+ V L CG++RF LP++ ++DYPTLPTL Sbjct: 88 VNQPGRIAVAGKLIADITATLPNKPVEIFVDGSTVQLKCGSSRFELPSIPLDDYPTLPTL 147 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE TG + LF +A+ QVA AAG+DDTLPMLTG+ +EI GE + L ATDRFRLA+R Sbjct: 148 PEVTGAINPRLFIDAVTQVATAAGKDDTLPMLTGVHMEIEGEDITLTATDRFRLALRRFQ 207 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGS--EVRLSLGAGMGVGKDGLLGISGDGKRST 250 W PD +A +L+PAK E A+ S V +++G+G +G +GL GI D +++T Sbjct: 208 WIPAFPDAQAKLLIPAKNFVENARTLDANSTEPVEIAVGSGDSIGAEGLFGIHVDARQTT 267 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TRLLDAEFP LLP H +AS +++ L +AIK VALVADR AQ+RM F G + LSA Sbjct: 268 TRLLDAEFPNVNPLLPKFHKCLASVEISSLQDAIKRVALVADRNAQIRMHFTPGEVLLSA 327 Query: 311 GADDVGRAEEDIAVEFAG--QPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPA 368 G D G AEE + EF G + L IAFNP YL DGL + ++RV FGFT +PA+L P Sbjct: 328 GGSDAGHAEESVPCEFIGTEEELLIAFNPAYLRDGLHVVRTQRVVFGFTESSRPAILIP- 386 Query: 369 SAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + D G + TD+ YLLMPVRLPG Sbjct: 387 --EPEKLPELNDDGLYPTPDTDFTYLLMPVRLPG 418 >tr|C0E1N3|C0E1N3_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 396 Score = 402 bits (1033), Expect = e-110 Identities = 205/394 (52%), Positives = 269/394 (68%), Gaps = 7/394 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + F + +E A AVSWVA+NLPT+PA PVL +L+T D+GL +GFDYEVS +VR+PAE Sbjct: 6 VSFVVAKEDLASAVSWVARNLPTKPAQPVLRAMLITADDDGLEFAGFDYEVSTKVRIPAE 65 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG + V+G+L++DIT LPNKPV+ +VDG+ V L CG++RF LP++ ++DYPTLPTL Sbjct: 66 VNQPGRIAVAGKLIADITATLPNKPVEIFVDGSTVQLKCGSSRFELPSIPLDDYPTLPTL 125 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE TG + LF +A+ QVA AAG+DDTLPMLTG+ +EI GE + L ATDRFRLA+R Sbjct: 126 PEVTGAINPRLFIDAVTQVATAAGKDDTLPMLTGVHMEIEGEDITLTATDRFRLALRRFQ 185 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTDGS--EVRLSLGAGMGVGKDGLLGISGDGKRST 250 W PD +A +L+PAK E A+ S V +++G+G +G +GL GI D +++T Sbjct: 186 WIPAFPDAQAKLLIPAKNFVENARTLDANSTEPVEIAVGSGDSIGAEGLFGIHVDARQTT 245 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TRLLDAEFP LLP H +AS +++ L +AIK VALVADR AQ+RM F G + LSA Sbjct: 246 TRLLDAEFPNVNPLLPKFHKCLASVEISSLQDAIKRVALVADRNAQIRMHFTPGEVLLSA 305 Query: 311 GADDVGRAEEDIAVEFAG--QPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPA 368 G D G AEE + EF G + L IAFNP YL DGL + ++RV FGFT +PA+L P Sbjct: 306 GGSDAGHAEESVPCEFIGTEEELLIAFNPAYLRDGLHVVRTQRVVFGFTESSRPAILIP- 364 Query: 369 SAEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + D G + TD+ YLLMPVRLPG Sbjct: 365 --EPEKLPELNDDGLYPTPDTDFTYLLMPVRLPG 396 >tr|Q8NUD6|Q8NUD6_CORGL Tax_Id=1718 (dnaN)SubName: Full=DNA polymerase III beta subunit; EC=2.7.7.7; SubName: Full=DNA POLYMERASE III, BETA SUBUNIT; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 394 Score = 400 bits (1027), Expect = e-109 Identities = 194/393 (49%), Positives = 278/393 (70%), Gaps = 5/393 (1%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPA 71 ++ FR+ RE AV+WVA+NLPT+P PVL +L+T DEGL ++G+DY+VS VR+ A Sbjct: 5 NVSFRVAREDLVTAVAWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYDVSTRVRLSA 64 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 E++ PG + V+G+LLS+IT +LPNKPVDF +DG++ +TCG++RF LP + ++DYP LP Sbjct: 65 EVSQPGRIAVAGKLLSEITGSLPNKPVDFRIDGSKAFVTCGSSRFELPLIPLDDYPMLPK 124 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 LP TG++ A+LF+EA+ QVA AAG+DD+LPMLTG+ +EI G ++ LAATDRFRLA+R Sbjct: 125 LPAGTGSINAKLFTEAVSQVASAAGKDDSLPMLTGVSMEIVGNQINLAATDRFRLALRTF 184 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKANTDG--SEVRLSLGAGMGVGKDGLLGISGDGKRS 249 W A P++ +L+PA+TL + A++ G + +++G G VG++GL G+ D + + Sbjct: 185 EWEANDPELNVKLLIPARTLLDNARSLDSGLNDSIDIAVGTGDQVGREGLFGVHTDNRET 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLS 309 TTRLLDA+FP LLP EHTA+AS ++A L +AI+ V+LVA+R AQ+ + F++G + L+ Sbjct: 245 TTRLLDADFPNIAPLLPKEHTAIASVEIAPLVDAIRRVSLVAERNAQIVLHFSEGQVILT 304 Query: 310 AGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 AGA + G AEE + F G+ LTIAFNP YL DGL+ + + R FGFT P +PA++ P Sbjct: 305 AGATEAGHAEETLPCAFTGKELTIAFNPGYLKDGLSVVPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + + G F T + YLLMPVRLPG Sbjct: 365 EE---MPSANENGIFQTPDTYFTYLLMPVRLPG 394 >tr|A4Q9S1|A4Q9S1_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 394 Score = 400 bits (1027), Expect = e-109 Identities = 194/393 (49%), Positives = 278/393 (70%), Gaps = 5/393 (1%) Query: 12 DLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPA 71 ++ FR+ RE AV+WVA+NLPT+P PVL +L+T DEGL ++G+DY+VS VR+ A Sbjct: 5 NVSFRVAREDLVTAVAWVARNLPTKPTQPVLRAMLITADDEGLELAGYDYDVSTRVRLSA 64 Query: 72 EIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPT 131 E++ PG + V+G+LLS+IT +LPNKPVDF +DG++ +TCG++RF LP + ++DYP LP Sbjct: 65 EVSQPGRIAVAGKLLSEITGSLPNKPVDFRIDGSKAFVTCGSSRFELPLIPLDDYPMLPK 124 Query: 132 LPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVREL 191 LP TG++ A+LF+EA+ QVA AAG+DD+LPMLTG+ +EI G ++ LAATDRFRLA+R Sbjct: 125 LPAGTGSINAKLFTEAVSQVASAAGKDDSLPMLTGVSMEIVGNQINLAATDRFRLALRTF 184 Query: 192 TWNALSPDIEAAVLVPAKTLGEAAKANTDG--SEVRLSLGAGMGVGKDGLLGISGDGKRS 249 W A P++ +L+PA+TL + A++ G + +++G G VG++GL G+ D + + Sbjct: 185 EWEANDPELNVKLLIPARTLLDNARSLDSGLNDSIDIAVGTGDQVGREGLFGVHTDNRET 244 Query: 250 TTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLS 309 TTRLLDA+FP LLP EHTA+AS ++A L +AI+ V+LVA+R AQ+ + F++G + L+ Sbjct: 245 TTRLLDADFPNIAPLLPKEHTAIASVEIAPLVDAIRRVSLVAERNAQIVLHFSEGQVILT 304 Query: 310 AGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 AGA + G AEE + F G+ LTIAFNP YL DGL+ + + R FGFT P +PA++ P Sbjct: 305 AGATEAGHAEETLPCAFTGKELTIAFNPGYLKDGLSVVPTSRAVFGFTEPSRPAIMIPEP 364 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + + G F T + YLLMPVRLPG Sbjct: 365 EE---MPSANENGIFQTPDTYFTYLLMPVRLPG 394 >tr|C8XHU9|C8XHU9_NAKMY Tax_Id=479431 SubName: Full=DNA polymerase III, beta subunit; EC=2.7.7.7;[Nakamurella multipartita] Length = 408 Score = 384 bits (987), Expect = e-105 Identities = 211/415 (50%), Positives = 264/415 (63%), Gaps = 32/415 (7%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSA------- 65 +KFR+ R+ ADAV+WVAK+LP RP VPVL G+LL S LT++GFDYEVS Sbjct: 1 MKFRVARDDLADAVAWVAKSLPARPPVPVLGGILLEVSGSTLTVAGFDYEVSTRATLTVD 60 Query: 66 -----EVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPT 120 E P A VLVSGRLL++ITR+LP KPVD V G +V++ G+ARF+LPT Sbjct: 61 TLDELEPDAPGGPAGTDRVLVSGRLLAEITRSLPAKPVDLAVLGPKVSIVAGSARFTLPT 120 Query: 121 MAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAA 180 M VEDYP LP +P +GT+ + F+EA+ Q AIAAGRDDTLPMLTGIRVEI G+++ LAA Sbjct: 121 MPVEDYPPLPQMPAASGTVDSAEFAEAVAQTAIAAGRDDTLPMLTGIRVEIDGDRLTLAA 180 Query: 181 TDRFRLAVRELTWNALSPDIEAAVLVPAKTLGEAAKANTDGSEVRLSLGAGMGVGKDGLL 240 TDRFRLAVREL W+ ++ AVLVPA+TL +AAK +V ++LG +GLL Sbjct: 181 TDRFRLAVRELGWHPDQENLSTAVLVPARTLADAAKTLGGAKQVTVALG-------EGLL 233 Query: 241 GISGDGKRSTTRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRME 300 G+ +R+T RLLD EF K+R LLP HT VA L E+IK VALV DRG +R++ Sbjct: 234 GLDAGDRRTTVRLLDVEFVKYRSLLPTSHTTTVEVPVAALGESIKRVALVTDRGHHLRLQ 293 Query: 301 FADGMLRLSAGADDVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPG 360 +G L L+AG DD GRAEED+ E G+ L IAFNP+YL+DGL +H++ V FTTP Sbjct: 294 VGEGALTLTAGGDDEGRAEEDLPAEVDGEELLIAFNPSYLLDGLGVVHADTVRLSFTTPA 353 Query: 361 KPALLRPASAEDRIVSGPGDQGPFAAVP-------------TDYVYLLMPVRLPG 402 +PALL P D AA P Y YL+MP RLPG Sbjct: 354 RPALLVPIVKSDEPAESAEAAAEAAATPDIDADGVGSDEDTPAYRYLVMPARLPG 408 >tr|C2CSS7|C2CSS7_CORST Tax_Id=525268 SubName: Full=DNA polymerase III subunit beta; EC=2.7.7.7;[Corynebacterium striatum ATCC 6940] Length = 393 Score = 384 bits (985), Expect = e-104 Identities = 194/393 (49%), Positives = 269/393 (68%), Gaps = 7/393 (1%) Query: 13 LKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFDYEVSAEVRVPAE 72 + FR+ ++ A+AV+WVA++LP++ PVL +L+T D GL +GFDYEVS VR+ A Sbjct: 5 VSFRVAKDDLANAVAWVARSLPSKVTQPVLRAMLITADDNGLEFTGFDYEVSTRVRIAAM 64 Query: 73 IASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALTCGNARFSLPTMAVEDYPTLPTL 132 + PG + V+G+LL+DI +LPNK V+ ++V LTCG++RF LP + ++DYP LP L Sbjct: 65 VDEPGRIAVAGKLLADIVASLPNKEVEMTQQDSKVLLTCGSSRFELPVIPLDDYPQLPVL 124 Query: 133 PEDTGTLPAELFSEAIGQVAIAAGRDDTLPMLTGIRVEISGEKVVLAATDRFRLAVRELT 192 PE TGT+ +LF EAI QVA AAG+DDTLPMLTG+ +EI G V + ATDRFRLA+R Sbjct: 125 PEVTGTVNPQLFVEAISQVASAAGKDDTLPMLTGVHMEIHGSHVEMTATDRFRLAMRTFE 184 Query: 193 WNALSPDIEAAVLVPAKTLGEAAKANTD--GSEVRLSLGAGMGVGKDGLLGISGDGKRST 250 W SPD+EA +LVPAKTL + ++ V +++G G +G +GL G+ D + +T Sbjct: 185 WEPTSPDVEAKLLVPAKTLQDTGRSLDTHLNIPVEIAVGTGENIGAEGLFGLHADNRETT 244 Query: 251 TRLLDAEFPKFRQLLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSA 310 TR+LDA+FP LLP HTA+AS +VA L EAI+ V+L+ DR AQ+RMEF++G + L+A Sbjct: 245 TRMLDADFPNVSPLLPKTHTAMASIEVAPLQEAIRRVSLLTDRNAQIRMEFSEGQVTLAA 304 Query: 311 GADDVGRAEEDIAVEFAGQ-PLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPALLRPAS 369 GAD G+A+E + F G+ IAFNP+YL DGLA +H++RV FGFT P +PA++ P Sbjct: 305 GADS-GKADETLPCAFTGRDEFVIAFNPSYLKDGLAVVHTDRVVFGFTEPSRPAIMIPEP 363 Query: 370 AEDRIVSGPGDQGPFAAVPTDYVYLLMPVRLPG 402 E + + G F T++ YLLMPVRLPG Sbjct: 364 EEMPLAD---EDGVFPTPETNFTYLLMPVRLPG 393 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.317 0.135 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,021,735,991 Number of extensions: 134318644 Number of successful extensions: 398505 Number of sequences better than 10.0: 2162 Number of HSP's gapped: 393689 Number of HSP's successfully gapped: 2186 Length of query: 402 Length of database: 3,846,993,858 Length adjustment: 140 Effective length of query: 262 Effective length of database: 2,268,465,438 Effective search space: 594337944756 Effective search space used: 594337944756 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 81 (35.8 bits)