BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0003 (385 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA repli... 636 e-180 sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA repli... 633 e-179 sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replica... 551 e-155 sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA repli... 550 e-155 sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA replica... 533 e-149 sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA repli... 533 e-149 tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replicati... 533 e-149 tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replicati... 533 e-149 tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replicati... 533 e-149 tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replicati... 533 e-149 sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA repli... 532 e-149 sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA replica... 532 e-149 tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA r... 532 e-149 sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA replica... 524 e-147 sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA repli... 524 e-147 sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA repli... 516 e-144 sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA repli... 515 e-144 sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA repli... 515 e-144 sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA repli... 514 e-144 sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA repli... 508 e-142 sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA replica... 503 e-140 sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA repli... 503 e-140 tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA rep... 465 e-129 tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replicati... 394 e-107 tr|B1A028|B1A028_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 394 e-107 tr|B1A027|B1A027_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 394 e-107 tr|B1A022|B1A022_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 394 e-107 tr|B1A021|B1A021_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 394 e-107 tr|B1A019|B1A019_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 394 e-107 sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA repli... 392 e-107 tr|B1A026|B1A026_MYCAV Tax_Id=44282 (recF)RecName: Full=DNA repl... 392 e-107 tr|B1A025|B1A025_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA repl... 392 e-107 tr|B1A023|B1A023_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 392 e-107 tr|B1A020|B1A020_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA rep... 392 e-107 sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA repli... 392 e-107 tr|B1A029|B1A029_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA repli... 392 e-107 sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA repli... 391 e-107 tr|B1A024|B1A024_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA repl... 390 e-106 tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replicati... 390 e-106 sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA replic... 382 e-104 sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA repli... 367 1e-99 tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replicati... 365 7e-99 tr|C2AIV1|C2AIV1_TSUPA Tax_Id=521096 RecName: Full=DNA replicati... 360 2e-97 tr|D0LA35|D0LA35_GORB4 Tax_Id=526226 SubName: Full=DNA replicati... 358 6e-97 sp|Q8FUL4|RECF_COREF Tax_Id=152794 (recF)RecName: Full=DNA repli... 358 8e-97 tr|C8NRV3|C8NRV3_COREF Tax_Id=196164 (recF)SubName: Full=RecF pr... 358 8e-97 tr|D1ADA3|D1ADA3_THECU Tax_Id=471852 SubName: Full=DNA replicati... 355 4e-96 sp|A8LVH1|RECF_SALAI Tax_Id=391037 (recF)RecName: Full=DNA repli... 351 8e-95 sp|Q6M8X7|RECF_CORGL Tax_Id=1718 (recF)RecName: Full=DNA replica... 350 2e-94 sp|A4X0U0|RECF_SALTO Tax_Id=369723 (recF)RecName: Full=DNA repli... 348 8e-94 >sp|B2HI48|RECF_MYCMM Tax_Id=216594 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium marinum] Length = 385 Score = 636 bits (1641), Expect = e-180 Identities = 335/385 (87%), Positives = 336/385 (87%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL Sbjct: 1 MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE Sbjct: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYR Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 RVT VCLVGPHRDDLELRLGDQPAKGFASHGESWS Sbjct: 241 DDAAPDRVTLEEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP Sbjct: 301 MAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 SGWDARKVHIDLRDSADGRVSVVQS Sbjct: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 >sp|A0PKB4|RECF_MYCUA Tax_Id=362242 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium ulcerans] Length = 385 Score = 633 bits (1632), Expect = e-179 Identities = 333/385 (86%), Positives = 334/385 (86%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL Sbjct: 1 MYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE Sbjct: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL Sbjct: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYR Sbjct: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRASMDAFVAA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 RV VCLVGPHRDDLELRLGDQPAKGFASHGESWS Sbjct: 241 DDAAPDRVALEEGLLAALAARRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP Sbjct: 301 MAVALRLAAFALLRADGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 SGWDARKVHIDLRDSADGRVS VQS Sbjct: 361 SGWDARKVHIDLRDSADGRVSAVQS 385 >sp|Q9L7L5|RECF_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium paratuberculosis] Length = 385 Score = 551 bits (1419), Expect = e-155 Identities = 287/381 (75%), Positives = 312/381 (81%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWAHADLEL PGRTVF+G NGFGKTN++EALWYS+TLGSHRVGTDAPL Sbjct: 1 MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVLRAVLFAPE Sbjct: 61 IRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR RGDRGAL Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAASA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R +CLVGPHRDDLEL LG+Q AKGFASHGESWS Sbjct: 241 EVNAGDRDYLEAALLAGLAAHRDAELERGMCLVGPHRDDLELWLGEQVAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + D S+PVLLLDDVFAELDAARR ALA VAESAEQVLVTAAVLEDIP Sbjct: 301 LALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVS 381 +GW AR++ ++LRD+ GRVS Sbjct: 361 TGWQARRLFVELRDTDAGRVS 381 >sp|A0Q8R8|RECF_MYCA1 Tax_Id=243243 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium avium] Length = 385 Score = 550 bits (1418), Expect = e-155 Identities = 287/381 (75%), Positives = 311/381 (81%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWAHADLEL PGRTVF+G NGFGKTN++EALWYS+TLGSHRVGTDAPL Sbjct: 1 MYVRHLGLRDFRSWAHADLELQPGRTVFIGSNGFGKTNLLEALWYSSTLGSHRVGTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGADR V+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVLRAVLFAPE Sbjct: 61 IRAGADRTVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR RGDRGAL Sbjct: 121 DLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGARHRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 181 DTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRSSLGAAAAA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDLEL LG+Q AKGFASHGESWS Sbjct: 241 EVNAGDRDYLEAALLAGLAARRYAELERGVCLVGPHRDDLELWLGEQVAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + D S+PVLLLDDVFAELDAARR ALA VAESAEQVLVTAAVLEDIP Sbjct: 301 LALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALAAVAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVS 381 +GW AR++ ++LRD+ GRVS Sbjct: 361 AGWQARRLFVELRDTDAGRVS 381 >sp|Q59586|RECF_MYCTU Tax_Id=1773 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >sp|A5TY71|RECF_MYCTA Tax_Id=419947 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >tr|C6DQ78|C6DQ78_MYCTK Tax_Id=478434 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >tr|A5WI57|A5WI57_MYCTF Tax_Id=336982 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >tr|A4KN35|A4KN35_MYCTU Tax_Id=395095 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis str. Haarlem] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >tr|A2VMU5|A2VMU5_MYCTU Tax_Id=348776 RecName: Full=DNA replication and repair protein recF;[Mycobacterium tuberculosis C] Length = 385 Score = 533 bits (1374), Expect = e-149 Identities = 277/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++VLRQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >sp|C1AJ00|RECF_MYCBT Tax_Id=561275 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 532 bits (1371), Expect = e-149 Identities = 276/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++V+RQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >sp|Q7U314|RECF_MYCBO Tax_Id=1765 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 532 bits (1371), Expect = e-149 Identities = 276/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++V+RQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >tr|A1KEE4|A1KEE4_MYCBP Tax_Id=410289 (recF_1)RecName: Full=DNA replication and repair protein recF;[Mycobacterium bovis] Length = 385 Score = 532 bits (1371), Expect = e-149 Identities = 276/383 (72%), Positives = 298/383 (77%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHLGLRDFRSWA DLEL PGRTVFVGPNG+GKTN+IEALWYS TLGSHRV D PL Sbjct: 1 MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G DRAVISTIVVNDGRECAVDLEIA GR NKARLNRS VRSTR+V+GVLRAVLFAPE Sbjct: 61 IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL LVRGDPADRRRYLDDLA +RRP IA VRA+Y++V+RQRTALLKSV GAR+RGDRG Sbjct: 121 DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVVRQRTALLKSVPGARYRGDRGVF 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWDSRLA+HGAEL+AARIDLV LAPEV+KAYQLLAPESRSA+I YR Sbjct: 181 DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDL LRLGDQPAKGFASHGE+WS Sbjct: 241 EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG EPVLLLDDVFAELD RR ALA AESAEQVLVTAAVLEDIP Sbjct: 301 LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 +GWDAR+VHID+R G +SVV Sbjct: 361 AGWDARRVHIDVRADDTGSMSVV 383 >sp|P46391|RECF_MYCLE Tax_Id=1769 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium leprae] Length = 385 Score = 524 bits (1350), Expect = e-147 Identities = 272/383 (71%), Positives = 299/383 (78%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRH GLRDFRSW H DLEL PGRTVF GPNG GKTN+IEALWYS TL SHRVGTD PL Sbjct: 1 MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAG RA++STIVVN+GRECA+DLEIAAGRAN+ARLNRS VR REV+GVLRAVLFAPE Sbjct: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALV GDPA+RRRYLDDLAT+R+P IA VRADYDKVLRQRTALLKS++ AR+R D+G L Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWD+RLA+HGAELMAARIDLV LAPEVEKAYQLLAP SR+A+I+YR Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R +CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG+EPVLLLDDVFAELDAAR ALA VAESAEQVLVT+A EDIP Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 GWDA+ V +DLRDS GRVSVV Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 >sp|B8ZTP0|RECF_MYCLB Tax_Id=561304 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium leprae] Length = 385 Score = 524 bits (1350), Expect = e-147 Identities = 272/383 (71%), Positives = 299/383 (78%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRH GLRDFRSW H DLEL PGRTVF GPNG GKTN+IEALWYS TL SHRVGTD PL Sbjct: 1 MYVRHFGLRDFRSWDHVDLELNPGRTVFFGPNGNGKTNLIEALWYSTTLSSHRVGTDIPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAG RA++STIVVN+GRECA+DLEIAAGRAN+ARLNRS VR REV+GVLRAVLFAPE Sbjct: 61 IRAGTIRAIVSTIVVNEGRECAIDLEIAAGRANRARLNRSLVRGMREVVGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALV GDPA+RRRYLDDLAT+R+P IA VRADYDKVLRQRTALLKS++ AR+R D+G L Sbjct: 121 DLALVCGDPANRRRYLDDLATVRQPVIAAVRADYDKVLRQRTALLKSLAAARYRSDQGVL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTLDVWD+RLA+HGAELMAARIDLV LAPEVEKAYQLLAP SR+A+I+YR Sbjct: 181 DTLDVWDTRLAEHGAELMAARIDLVNQLAPEVEKAYQLLAPGSRTASISYRASLDIGGIA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R +CLVGPHRD+LELRLGDQPAKGFASHGESWS Sbjct: 241 GVGSSDRALLQADLLAGLSTRRNVELERGICLVGPHRDELELRLGDQPAKGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG+EPVLLLDDVFAELDAAR ALA VAESAEQVLVT+A EDIP Sbjct: 301 LAIALRLAAYELLRADGNEPVLLLDDVFAELDAARCRALATVAESAEQVLVTSAAQEDIP 360 Query: 361 SGWDARKVHIDLRDSADGRVSVV 383 GWDA+ V +DLRDS GRVSVV Sbjct: 361 VGWDAKWVTVDLRDSDSGRVSVV 383 >sp|A3PSE0|RECF_MYCSJ Tax_Id=164757 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 516 bits (1330), Expect = e-144 Identities = 273/385 (70%), Positives = 298/385 (77%), Gaps = 5/385 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VRHL L DFRSWA ADLEL PGRTVFVGPNGFGKTN++EALWYSATLGSHRV +DAPL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGA RAV+STIVVN+GRE AVDLEI GRANKARLNRSPVRS REV+GVLRAVLFAPE Sbjct: 61 IRAGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP +RRRYLD+LAT RRP+IAGVRADYD+V+RQRTALLKS +GAR+RGDR L Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 +TLDVWD LA HGA LMAAR DLV LAPEVEKAYQLLAP SR AAI YR Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 VCLVGPHRDDLELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAA-----LLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DGS+PVLLLDDVFAELDAARR ALA VA SAEQVLVTAAV EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 + WDAR++ I ++D DGRVS+V+S Sbjct: 356 ADWDARRIVIRMQDDDDGRVSMVES 380 >sp|Q1BG58|RECF_MYCSS Tax_Id=164756 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 515 bits (1327), Expect = e-144 Identities = 272/385 (70%), Positives = 297/385 (77%), Gaps = 5/385 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VRHL L DFRSWA ADLEL PGRTVFVGPNGFGKTN++EALWYSATLGSHRV +DAPL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR GA RAV+STIVVN+GRE AVDLEI GRANKARLNRSPVRS REV+GVLRAVLFAPE Sbjct: 61 IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP +RRRYLD+LAT RRP+IAGVRADYD+V+RQRTALLKS +GAR+RGDR L Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 +TLDVWD LA HGA LMAAR DLV LAPEVEKAYQLLAP SR AAI YR Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 VCLVGPHRDDLELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAA-----LLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DGS+PVLLLDDVFAELDAARR ALA VA SAEQVLVTAAV EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 + WDAR++ I ++D DGRVS+V+S Sbjct: 356 ADWDARRIMIRMQDDDDGRVSMVES 380 >sp|A1U8S3|RECF_MYCSK Tax_Id=189918 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium sp.] Length = 380 Score = 515 bits (1327), Expect = e-144 Identities = 272/385 (70%), Positives = 297/385 (77%), Gaps = 5/385 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VRHL L DFRSWA ADLEL PGRTVFVGPNGFGKTN++EALWYSATLGSHRV +DAPL Sbjct: 1 MFVRHLTLTDFRSWARADLELEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR GA RAV+STIVVN+GRE AVDLEI GRANKARLNRSPVRS REV+GVLRAVLFAPE Sbjct: 61 IRVGAPRAVVSTIVVNEGRELAVDLEITTGRANKARLNRSPVRSPREVLGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP +RRRYLD+LAT RRP+IAGVRADYD+V+RQRTALLKS +GAR+RGDR L Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPSIAGVRADYDRVIRQRTALLKSAAGARYRGDRSVL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 +TLDVWD LA HGA LMAAR DLV LAPEVEKAYQLLAP SR AAI YR Sbjct: 181 ETLDVWDGHLAAHGALLMAARADLVHHLAPEVEKAYQLLAPGSRPAAIRYRTSIDAEDDV 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 VCLVGPHRDDLELRLGDQ AKG+ASHGESWS Sbjct: 241 SAEYYEAA-----LLDAMTRRRDAELERGVCLVGPHRDDLELRLGDQMAKGYASHGESWS 295 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DGS+PVLLLDDVFAELDAARR ALA VA SAEQVLVTAAV EDIP Sbjct: 296 MALSLRLAAYELLRTDGSDPVLLLDDVFAELDAARRRALAEVAASAEQVLVTAAVAEDIP 355 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 + WDAR++ I ++D DGRVS+V+S Sbjct: 356 ADWDARRIMIRMQDDDDGRVSMVES 380 >sp|A4T4U1|RECF_MYCGI Tax_Id=350054 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium gilvum] Length = 389 Score = 514 bits (1323), Expect = e-144 Identities = 268/384 (69%), Positives = 297/384 (77%), Gaps = 1/384 (0%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHL L DFRSW+ +LEL PGRTVFVGPNGFGKTN++EALWYSATLGSHRV +DAPL Sbjct: 1 MYVRHLALTDFRSWSRVELELSPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGA+RAV+STI+VN+GRE AVDL+I +GRANKARLNRSPVRS RE++GVLRAVLFAPE Sbjct: 61 IRAGAERAVVSTIIVNEGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP DRRRYLD+LAT RRP IA VRADYDKV+RQRTALLK+ S ARFRGDRGAL Sbjct: 121 DLALVRGDPGDRRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASSARFRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYR-XXXXXXXX 239 +TLDVWD LA HGA+L+AAR+DLV LAPEVEKAYQLLAP SR A + YR Sbjct: 181 ETLDVWDGHLAAHGAQLIAARVDLVHELAPEVEKAYQLLAPASRPATVRYRSGVEVVEAE 240 Query: 240 XXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESW 299 VCLVGPHRDDLELRLGDQPAKGFASHGESW Sbjct: 241 AAAGNSDPEVFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESW 300 Query: 300 SMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDI 359 SM DGS+PVLLLDDVFAELD+ARR ALA+VA SAEQVLVTAAV EDI Sbjct: 301 SMALSLRLAAYELLRADGSDPVLLLDDVFAELDSARRQALAQVAASAEQVLVTAAVGEDI 360 Query: 360 PSGWDARKVHIDLRDSADGRVSVV 383 P WDAR++ I + DS GRVSV+ Sbjct: 361 PVDWDARRIEIAMTDSDLGRVSVL 384 >sp|A1T105|RECF_MYCVP Tax_Id=350058 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium vanbaalenii] Length = 386 Score = 508 bits (1308), Expect = e-142 Identities = 266/386 (68%), Positives = 300/386 (77%), Gaps = 1/386 (0%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHL L DFRSWA +LEL PGRTVFVG NGFGKTN+IEALWYSATLGSHRV +DAPL Sbjct: 1 MYVRHLALTDFRSWARVELELEPGRTVFVGSNGFGKTNLIEALWYSATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGA+RAV+STIVVNDGRE AVDL+I +GRANKARLNRSPVRS RE++GVLRAVLFAPE Sbjct: 61 IRAGAERAVVSTIVVNDGRELAVDLDITSGRANKARLNRSPVRSAREILGVLRAVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP +RRRYLD+LAT RRP IA VRADYDKV+RQRTALLK+ SGAR+RGDRGAL Sbjct: 121 DLALVRGDPGERRRYLDELATTRRPRIAAVRADYDKVVRQRTALLKTASGARYRGDRGAL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYR-XXXXXXXX 239 +TLDVW+ LA HGA+L++AR+ LV LAPEVEKAYQLLAP SR AAI YR Sbjct: 181 ETLDVWNGHLASHGAQLISARVQLVNELAPEVEKAYQLLAPGSRPAAIRYRSGVDVVEAE 240 Query: 240 XXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESW 299 VCLVGPHRDDLELRLGDQ AKGFASHGESW Sbjct: 241 AAAGNSDEEMFEAALLDALSRRRDAELERGVCLVGPHRDDLELRLGDQVAKGFASHGESW 300 Query: 300 SMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDI 359 SM +GS+PVLLLDDVFAELD+ARR ALA+VA +AEQVLVTAAV EDI Sbjct: 301 SMALALRLAAYELLRVEGSDPVLLLDDVFAELDSARRQALAQVAATAEQVLVTAAVEEDI 360 Query: 360 PSGWDARKVHIDLRDSADGRVSVVQS 385 P+ WDAR++ I ++DS GR+SVV++ Sbjct: 361 PAEWDARRIGITMQDSDGGRISVVRT 386 >sp|P0C561|RECF_MYCSM Tax_Id=1772 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium smegmatis] Length = 384 Score = 503 bits (1296), Expect = e-140 Identities = 262/385 (68%), Positives = 292/385 (75%), Gaps = 1/385 (0%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++ RHLGL DFRSWA DL+L PGRTVFVGPNGFGKTN++EALWYSATLGSHRV TDAPL Sbjct: 1 MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGA+RA++STIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE++GVLRAVLF+PE Sbjct: 61 IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL+LVRGDP DRRRYLD+LAT RRP +AGVRADYDKV+RQRTALLK+ +GAR+RGDR + Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWD LA HGA L+A+R+ LV L PEVEKAYQLLAP SR AAI YR Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 VCLVGPHRDDLELRLGDQPAKGFASHGESWS Sbjct: 241 PGPESVEF-YEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DG EPVLLLDDVFAELD +RR ALA VA SAEQVLVTAAV EDIP Sbjct: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 WDAR+V I + + GRVS+V S Sbjct: 360 EDWDARRVEIRMVEDDGGRVSMVAS 384 >sp|A0QND8|RECF_MYCS2 Tax_Id=246196 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium smegmatis] Length = 384 Score = 503 bits (1296), Expect = e-140 Identities = 262/385 (68%), Positives = 292/385 (75%), Gaps = 1/385 (0%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++ RHLGL DFRSWA DL+L PGRTVFVGPNGFGKTN++EALWYSATLGSHRV TDAPL Sbjct: 1 MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IRAGA+RA++STIVVN+GRE AVDLEI +GRANKARLNRSPVRS RE++GVLRAVLF+PE Sbjct: 61 IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL+LVRGDP DRRRYLD+LAT RRP +AGVRADYDKV+RQRTALLK+ +GAR+RGDR + Sbjct: 121 DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 DTL+VWD LA HGA L+A+R+ LV L PEVEKAYQLLAP SR AAI YR Sbjct: 181 DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 VCLVGPHRDDLELRLGDQPAKGFASHGESWS Sbjct: 241 PGPESVEF-YEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWS 299 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 M DG EPVLLLDDVFAELD +RR ALA VA SAEQVLVTAAV EDIP Sbjct: 300 MALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALATVAGSAEQVLVTAAVGEDIP 359 Query: 361 SGWDARKVHIDLRDSADGRVSVVQS 385 WDAR+V I + + GRVS+V S Sbjct: 360 EDWDARRVEIRMVEDDGGRVSMVAS 384 >tr|B1ME43|B1ME43_MYCA9 Tax_Id=561007 (recF)RecName: Full=DNA replication and repair protein recF;[Mycobacterium abscessus] Length = 401 Score = 465 bits (1196), Expect = e-129 Identities = 249/383 (65%), Positives = 280/383 (73%), Gaps = 5/383 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 VYVR LGLRDFRSW +LEL PGRTVFVGPNG+GKTN++EALWYS+TLGSHRV TDAPL Sbjct: 20 VYVRQLGLRDFRSWERVNLELEPGRTVFVGPNGYGKTNLVEALWYSSTLGSHRVATDAPL 79 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR GA+RAV+STIVVNDGRE A+DLEIAAGRANKAR+NRSPVRS REV+G+L AVLFAPE Sbjct: 80 IRTGAERAVVSTIVVNDGRELAIDLEIAAGRANKARVNRSPVRSPREVLGILHAVLFAPE 139 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGA-RFRGDRGA 179 DL+LVRGDPADRRR+LDDL RRP +AGVRADYDKVLRQRTALLK+ A R R D+ Sbjct: 140 DLSLVRGDPADRRRFLDDLLIQRRPRMAGVRADYDKVLRQRTALLKTAMAALRQRHDQSV 199 Query: 180 LDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXX 239 LDTLDVWD L HGAEL++ARI+LV L P VEK+YQLLAP SR A IAYR Sbjct: 200 LDTLDVWDGHLVAHGAELLSARIELVGELHPLVEKSYQLLAPASRPADIAYRSSVEGVEA 259 Query: 240 XXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESW 299 VCLVGPHRDDLELRLGD PAKGFASHGESW Sbjct: 260 GLSVEH----LADALQAGLVAKRSAEIERGVCLVGPHRDDLELRLGDGPAKGFASHGESW 315 Query: 300 SMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDI 359 S DG++PVL+LDDVFAELD ARR +LA VA AEQVLVTAAV +D+ Sbjct: 316 SFALALRLAAFDLLRADGTDPVLMLDDVFAELDGARRRSLATVAADAEQVLVTAAVPDDV 375 Query: 360 PSGWDARKVHIDLRDSADGRVSV 382 P AR V +++++ GR SV Sbjct: 376 PEELSARTVTVEVQEGPAGRKSV 398 >tr|C6WCF7|C6WCF7_ACTMD Tax_Id=446462 RecName: Full=DNA replication and repair protein recF;[Actinosynnema mirum] Length = 371 Score = 394 bits (1012), Expect = e-107 Identities = 209/370 (56%), Positives = 249/370 (67%), Gaps = 7/370 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHL + DFRSW HADL PG V VG NG GKTN++EAL Y ATLGSHRV +DAPL Sbjct: 1 MYVRHLQVTDFRSWEHADLAFEPGVNVLVGRNGHGKTNLVEALGYVATLGSHRVASDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR+GA RAV+ T VVN+GRE V+LEI GRAN+AR+NR PV R+V+G+LR VLFAPE Sbjct: 61 IRSGAQRAVVRTAVVNEGRELLVELEITPGRANRARVNRGPVPRPRDVLGILRTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DL+LVRGDP +RRR+LD+L TLR P AGVR+DY++VLRQR ALLK+V R L Sbjct: 121 DLSLVRGDPGERRRFLDELLTLRAPRYAGVRSDYERVLRQRGALLKTVRSVR----SAEL 176 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 TLDVWD LA+HGAEL+AAR+DLV +AP AY +APESR A ++YR Sbjct: 177 GTLDVWDGHLAKHGAELLAARLDLVAAIAPHAAAAYAEVAPESRPALLSYR---SSLGEA 233 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R VCLVGPHRDDLEL LG+ PAKG+ASHGESWS Sbjct: 234 FPGTHDREVLEDALLAELHRLRPQEIDRGVCLVGPHRDDLELSLGELPAKGYASHGESWS 293 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 +G+EPVL+LDDVFAELD RR LA+VA +AEQV +TAAV ED+P Sbjct: 294 FALALRLGAYELLREEGAEPVLVLDDVFAELDRGRRRQLAKVAAAAEQVFITAAVAEDVP 353 Query: 361 SGWDARKVHI 370 DA + H+ Sbjct: 354 EELDAARFHV 363 >tr|B1A028|B1A028_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 394 bits (1012), Expect = e-107 Identities = 212/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A027|B1A027_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 394 bits (1012), Expect = e-107 Identities = 212/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAAHRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A022|B1A022_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 394 bits (1012), Expect = e-107 Identities = 212/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGVAASAEVNDGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A021|B1A021_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 394 bits (1012), Expect = e-107 Identities = 212/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A019|B1A019_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 394 bits (1011), Expect = e-107 Identities = 212/288 (73%), Positives = 225/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADR V+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRTVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R VCLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAAAAEVNAGDRDYLEAALLAGLAARRYAELERGVCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >sp|Q0SAG4|RECF_RHOSR Tax_Id=101510 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus sp.] Length = 410 Score = 392 bits (1008), Expect = e-107 Identities = 216/398 (54%), Positives = 257/398 (64%), Gaps = 17/398 (4%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR L LRDFRSW L L PG TVFVGPNG GKTN++EAL Y +TL SHRV +DAPL Sbjct: 1 MFVRALSLRDFRSWDALGLTLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G +A VVN GRE VDLE+ G++N+AR+N+SP R RE++G+L+ VLFAPE Sbjct: 61 IRTGTGQAFAGATVVNAGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRG-- 178 DL+LVRGDP DRRRYLD+L T R P +A VRADYD+VLRQR+ALLK+ GA R RG Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDRVLRQRSALLKTAGGALRRVSRGSG 180 Query: 179 --------ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAY 230 AL TL+VWD LA HGA+L+A R+ LV LAP + ++YQ LAPESR A+I Y Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240 Query: 231 RXXXXXXXXXXXXXXXRVT-------XXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELR 283 R RV VCLVGPHRDDLEL Sbjct: 241 RSSLGSSLPPEFTEPARVPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300 Query: 284 LGDQPAKGFASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVA 343 LGD PAKGFASHGESWS DGS+PVL+LDDVFAELD RR ALA+VA Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRSDGSDPVLMLDDVFAELDRRRRRALAKVA 360 Query: 344 ESAEQVLVTAAVLEDIPSGWDARKVHIDLRDSADGRVS 381 AEQVL+TAAV ED+P DA + ++ RD+ GR+S Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRIS 398 >tr|B1A026|B1A026_MYCAV Tax_Id=44282 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. silvaticum] Length = 289 Score = 392 bits (1008), Expect = e-107 Identities = 211/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A025|B1A025_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. avium] Length = 289 Score = 392 bits (1008), Expect = e-107 Identities = 211/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A023|B1A023_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 392 bits (1008), Expect = e-107 Identities = 211/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGAL+TLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALETLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAAAAEVNAGDRDYLEAALLAGLADRRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|B1A020|B1A020_MYCAV Tax_Id=439334 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. hominissuis] Length = 289 Score = 392 bits (1008), Expect = e-107 Identities = 211/288 (73%), Positives = 226/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG++ AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLSGLAARRDAEMERGMCLVGPHRDDLELWLGERVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >sp|C0ZLE4|RECF_RHOE4 Tax_Id=234621 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus erythropolis] Length = 409 Score = 392 bits (1006), Expect = e-107 Identities = 206/393 (52%), Positives = 260/393 (66%), Gaps = 12/393 (3%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR LRDFRSW L+L PG TVF+G NG GKTN++E+L Y +TL SHRV TDAP+ Sbjct: 1 MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSTDAPM 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR+G+ A VVN+GRE +D+E+ G++N+AR+N+SP R REV+G+L++V+FAPE Sbjct: 61 IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRG-- 178 DL+LVRGDP DRRRYLD+L T R P +A VRADYDKVLRQR+ALLK+ A RG RG Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180 Query: 179 ---ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXX 235 L TL+VWD LA HGA+L+A R++LV LAP + ++Y+ +APESR A+I Y+ Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240 Query: 236 XXXXXXXXXXXRVT-------XXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQP 288 R++ VCLVGPHRDDLEL LGD P Sbjct: 241 SSLDPEFTDPARISGIDDVAYLEERFHLELAQMRSKEIDRGVCLVGPHRDDLELVLGDSP 300 Query: 289 AKGFASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQ 348 AKGFASHGESWS DGS+PVL+LDDVFAELD RR ALA VA +AEQ Sbjct: 301 AKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATAEQ 360 Query: 349 VLVTAAVLEDIPSGWDARKVHIDLRDSADGRVS 381 VL+TAAV ED+P +A K ++ D+ DGR+S Sbjct: 361 VLITAAVPEDVPDELEAAKFGVEASDTGDGRIS 393 >tr|B1A029|B1A029_MYCPA Tax_Id=1770 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium paratuberculosis] Length = 289 Score = 392 bits (1006), Expect = e-107 Identities = 211/288 (73%), Positives = 225/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNR PVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRLPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG+Q AKGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAELERGMCLVGPHRDDLELWLGEQVAKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAFELLRADESDPVLLLDDVFAELDAARRRALA 288 >sp|C1B7T0|RECF_RHOOB Tax_Id=632772 (recF)RecName: Full=DNA replication and repair protein recF;[Rhodococcus opacus] Length = 410 Score = 391 bits (1004), Expect = e-107 Identities = 214/398 (53%), Positives = 256/398 (64%), Gaps = 17/398 (4%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR L LRDFRSW L L PG TVFVGPNG GKTN++EAL Y +TL SHRV +DAPL Sbjct: 1 MFVRALSLRDFRSWDALGLNLRPGCTVFVGPNGHGKTNVLEALGYLSTLSSHRVSSDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR G +A VVN GRE VDLE+ G++N+AR+N+SP R RE++G+L+ VLFAPE Sbjct: 61 IRTGTAQAFAGATVVNTGRELTVDLELNEGKSNRARINQSPTRRPREILGILQTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRG-- 178 DL+LVRGDP DRRRYLD+L T R P +A VRADY++VLRQR+ALLK+ GA R RG Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYERVLRQRSALLKTAGGALRRSSRGGG 180 Query: 179 --------ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAY 230 AL TL+VWD LA HGA+L+A R+ LV LAP + ++YQ LAPESR A+I Y Sbjct: 181 RPSEDGASALATLEVWDGHLAAHGAQLLAGRLHLVHDLAPHLAESYQSLAPESRPASIRY 240 Query: 231 RXXXXXXXXXXXXXXXRVT-------XXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELR 283 R R VCLVGPHRDDLEL Sbjct: 241 RSSLGSSLPPEFTAPARAPEAGDIAFLEERFLQELSVMRSKEIERGVCLVGPHRDDLELH 300 Query: 284 LGDQPAKGFASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVA 343 LGD PAKGFASHGESWS DGS+PVL+LDDVFAELD RR ALA+VA Sbjct: 301 LGDTPAKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRKRRRALAKVA 360 Query: 344 ESAEQVLVTAAVLEDIPSGWDARKVHIDLRDSADGRVS 381 AEQVL+TAAV ED+P DA + ++ RD+ GR+S Sbjct: 361 LDAEQVLITAAVPEDVPEELDAVRFGVEARDTDRGRIS 398 >tr|B1A024|B1A024_MYCAV Tax_Id=44454 (recF)RecName: Full=DNA replication and repair protein recF; Flags: Fragment;[Mycobacterium avium subsp. avium] Length = 289 Score = 390 bits (1003), Expect = e-106 Identities = 210/288 (72%), Positives = 225/288 (78%) Query: 53 RVGTDAPLIRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVL 112 RVGTDAPLIRAGADRAV+STIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREV+GVL Sbjct: 1 RVGTDAPLIRAGADRAVVSTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVLGVL 60 Query: 113 RAVLFAPEDLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGAR 172 RAVLFAPEDLALVRGDP++RRRYLDDLATLRRP IA VRADYDKVLRQRTALLKS+SGAR Sbjct: 61 RAVLFAPEDLALVRGDPSERRRYLDDLATLRRPAIAAVRADYDKVLRQRTALLKSLSGAR 120 Query: 173 FRGDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRX 232 RGDRGALDTLDVWDSRLA++GA+LMAARIDLV LAPEVEKAYQLLAP SR+A+I YR Sbjct: 121 HRGDRGALDTLDVWDSRLAEYGAQLMAARIDLVNQLAPEVEKAYQLLAPGSRAASIGYRS 180 Query: 233 XXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGF 292 R +CLVGPHRDDLEL LG++ KGF Sbjct: 181 SLGAAASAEVNAGDRDYLEAALLAGLAARRDAEMERGMCLVGPHRDDLELWLGERVPKGF 240 Query: 293 ASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALA 340 ASHGESWS+ D S+PVLLLDDVFAELDAARR ALA Sbjct: 241 ASHGESWSLALSLRLAAYELLRADESDPVLLLDDVFAELDAARRRALA 288 >tr|C3JLE2|C3JLE2_RHOER Tax_Id=596309 RecName: Full=DNA replication and repair protein recF;[Rhodococcus erythropolis SK121] Length = 409 Score = 390 bits (1001), Expect = e-106 Identities = 205/393 (52%), Positives = 259/393 (65%), Gaps = 12/393 (3%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR LRDFRSW L+L PG TVF+G NG GKTN++E+L Y +TL SHRV DAP+ Sbjct: 1 MFVRRFSLRDFRSWDSLTLDLTPGTTVFLGSNGHGKTNVLESLGYLSTLSSHRVSADAPM 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR+G+ A VVN+GRE +D+E+ G++N+AR+N+SP R REV+G+L++V+FAPE Sbjct: 61 IRSGSASAFAGATVVNNGRELTIDVELIEGKSNRARINQSPTRRPREVLGILQSVMFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRG-- 178 DL+LVRGDP DRRRYLD+L T R P +A VRADYDKVLRQR+ALLK+ A RG RG Sbjct: 121 DLSLVRGDPGDRRRYLDELLTSRIPRMAAVRADYDKVLRQRSALLKTAGAALRRGSRGGE 180 Query: 179 ---ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXX 235 L TL+VWD LA HGA+L+A R++LV LAP + ++Y+ +APESR A+I Y+ Sbjct: 181 SDNVLSTLEVWDGHLAAHGAQLLAGRLELVHDLAPHLAESYRSIAPESRPASIRYKSSLG 240 Query: 236 XXXXXXXXXXXRVT-------XXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQP 288 R++ VCLVGPHRDDLEL LGD P Sbjct: 241 SSLDPEFTDPARISGIDDVAYLEERFHHELAQMRSKEIDRGVCLVGPHRDDLELILGDSP 300 Query: 289 AKGFASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQ 348 AKGFASHGESWS DGS+PVL+LDDVFAELD RR ALA VA +AEQ Sbjct: 301 AKGFASHGESWSFALSLRLAGFALLRADGSDPVLMLDDVFAELDRRRRRALATVAATAEQ 360 Query: 349 VLVTAAVLEDIPSGWDARKVHIDLRDSADGRVS 381 VL+TAAV ED+P +A K ++ D+ DGR+S Sbjct: 361 VLITAAVPEDVPDELEAAKFGVEASDTGDGRIS 393 >sp|Q5Z3Z6|RECF_NOCFA Tax_Id=37329 (recF)RecName: Full=DNA replication and repair protein recF;[Nocardia farcinica] Length = 388 Score = 382 bits (980), Expect = e-104 Identities = 210/385 (54%), Positives = 248/385 (64%), Gaps = 6/385 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR L LRDFRSW H +LEL GRTVF+G NG GKTN++EA+ Y ATLGSHRV DAPL Sbjct: 1 MFVRALSLRDFRSWEHVELELSTGRTVFLGANGNGKTNLLEAVGYLATLGSHRVSADAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR+GA RA + VVN GRE +D+E+ G AN+A++NRSPVR TRE++G+L+ VLFAPE Sbjct: 61 IRSGAQRARVGANVVNAGRELRIDVELNQGSANRAQINRSPVRRTREILGILQTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALVRGDP +RRR+LD+L T R P +AGVRADYD+VLRQR+ALLK + R L Sbjct: 121 DLALVRGDPGERRRFLDELCTARLPRLAGVRADYDRVLRQRSALLK--TAGRHARSTADL 178 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 TLDVWD LA H A L+A R+ LV L P + +AY+ LAPESR AAI YR Sbjct: 179 STLDVWDGHLAGHAAVLVAQRLRLVHDLFPYLAEAYRSLAPESRPAAIGYRSAYLPGEFL 238 Query: 241 XXXXXXR----VTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHG 296 R VCLVGPHRD+LEL LGD PAKGFASHG Sbjct: 239 DPARAPRDDDAAALEEIILRELAAARRKELERGVCLVGPHRDELELMLGDTPAKGFASHG 298 Query: 297 ESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVL 356 ESWS +EPVLLLDDVFAELD RRTALA VA AEQVL+TAAV Sbjct: 299 ESWSFALALRLASFDLLRSTSAEPVLLLDDVFAELDRRRRTALAAVAADAEQVLITAAVP 358 Query: 357 EDIPSGWDARKVHIDLRDSADGRVS 381 ED+P+ A + + A R S Sbjct: 359 EDVPAELSATPIRVATAGEAGHRTS 383 >sp|A4F5N5|RECF_SACEN Tax_Id=405948 (recF)RecName: Full=DNA replication and repair protein recF;[Saccharopolyspora erythraea] Length = 391 Score = 367 bits (942), Expect = 1e-99 Identities = 203/392 (51%), Positives = 242/392 (61%), Gaps = 14/392 (3%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVRHL + DFRSW HADL PG TV VG NG GKTN++EAL Y ATLGSHRV TDAPL Sbjct: 1 MYVRHLQVTDFRSWPHADLTFEPGPTVLVGSNGQGKTNLVEALGYVATLGSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +R G RAV+ VVN GRE V+LEI G+AN+AR+NR R+V+G+LR VLFAPE Sbjct: 61 VRYGTQRAVVRAAVVNHGRELLVELEITPGKANRARINRGAAGKPRDVLGILRTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 D+A+VRGDP +RRR+LDDL R P AGVR+DYD+VLRQR+ALLKS A+ G G L Sbjct: 121 DMAMVRGDPGERRRFLDDLLVARAPRYAGVRSDYDRVLRQRSALLKSAGAAKRGGSGGDL 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAY-------QLLAPESRSAAIAYRXX 233 TL+VWD LA++GAEL+A R+DLV +AP V AY + AP R A + YR Sbjct: 181 RTLEVWDGHLARYGAELLAGRLDLVAAIAPHVTSAYANVAATAEETAPSGRVADVRYRSS 240 Query: 234 XXXXXXXXXXXXXR-----VTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQP 288 V LVGPHRDDLEL LG+ P Sbjct: 241 LGESLPEGYGVPRGEPADVEVLEKALLAELERVRAQELERGVSLVGPHRDDLELMLGELP 300 Query: 289 AKGFASHGESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQ 348 AKG+ASHGESWS DG+EPVL+LDDVFAELD RR+ LA + AEQ Sbjct: 301 AKGYASHGESWSFALALRLASYHLLAEDGAEPVLILDDVFAELDRRRRSRLAELVAGAEQ 360 Query: 349 VLVTAAVLEDIPSGWDARKVHIDLRDSADGRV 380 VLVTAAV ED+P + V D+R+ RV Sbjct: 361 VLVTAAVAEDVPE--ELTGVRFDVREGEVRRV 390 >tr|C7MRN6|C7MRN6_SACVD Tax_Id=471857 RecName: Full=DNA replication and repair protein recF;[Saccharomonospora viridis] Length = 390 Score = 365 bits (936), Expect = 7e-99 Identities = 203/372 (54%), Positives = 240/372 (64%), Gaps = 12/372 (3%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +Y+RHL + DFRSW H DL L G TV VGPNG GKTN++EA+ Y +TL SHRV TDAPL Sbjct: 1 MYLRHLQVTDFRSWEHVDLPLAQGPTVLVGPNGQGKTNLLEAIGYISTLSSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +R G DRA++ VVN+GRE V+LEIA GRAN+AR+NR V R+V+G+LR VLF+PE Sbjct: 61 VRHGCDRALVRAAVVNEGRELTVELEIAPGRANRARINRGAVGKPRDVLGILRTVLFSPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVS------GARFR 174 DLALVRGDP++RRR+LDDL R P AGVR++YD+VLRQR ALLKSV GAR Sbjct: 121 DLALVRGDPSERRRFLDDLLVQRAPRYAGVRSEYDRVLRQRNALLKSVGRAGGRRGAREE 180 Query: 175 GDRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYR--- 231 D AL TL VWD+ LA GAEL+AAR++LV L P V +Y +AP+SR A IAYR Sbjct: 181 TDPYALSTLQVWDNHLASAGAELLAARLNLVAELGPYVASSYADVAPDSRPARIAYRSSL 240 Query: 232 --XXXXXXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPA 289 V L+GPHRDDLEL LG+ PA Sbjct: 241 GGALPEGWGTPDGPEASTEQLGEILLRVLGEVRETELERGVSLIGPHRDDLELMLGEAPA 300 Query: 290 KGFASHGESWSMXXXXXXXXXXXXXXD-GSEPVLLLDDVFAELDAARRTALARVAESAEQ 348 KG+ASHGESWS + G EPVLLLDDVFAELD+ RR LA VA AEQ Sbjct: 301 KGYASHGESWSFALALRLASYRLLRNESGGEPVLLLDDVFAELDSRRRARLAEVATKAEQ 360 Query: 349 VLVTAAVLEDIP 360 VLVTAAV ED+P Sbjct: 361 VLVTAAVDEDVP 372 >tr|C2AIV1|C2AIV1_TSUPA Tax_Id=521096 RecName: Full=DNA replication and repair protein recF;[Tsukamurella paurometabola DSM 20162] Length = 385 Score = 360 bits (923), Expect = 2e-97 Identities = 199/372 (53%), Positives = 242/372 (65%), Gaps = 4/372 (1%) Query: 18 DLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPLIRAGADRAVISTIVVND 77 D+ELGPG TVFVG NGFGKTN+IEAL Y ATLGSHRV TD PLIR G + A + V N Sbjct: 2 DIELGPGVTVFVGRNGFGKTNLIEALNYLATLGSHRVSTDQPLIRVGTESATVLATVHNA 61 Query: 78 GRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPEDLALVRGDPADRRRYLD 137 GRE +++I AGRANKAR+N +P R R+++G+L++VLFAPEDL+LVRGDP RRR+LD Sbjct: 62 GRELTAEVDIVAGRANKARINTAPSRRPRDLLGILQSVLFAPEDLSLVRGDPGGRRRFLD 121 Query: 138 DLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGA---LDTLDVWDSRLAQHG 194 +LA LR P IA +ADYD+VL+QRTALLK+ A RG A L TLDVWD +LA+ G Sbjct: 122 ELAILRTPRIAAEKADYDRVLKQRTALLKTAYAAARRGGPDAESMLATLDVWDVQLARFG 181 Query: 195 AELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXXXXXXXXRVT-XXXX 253 AE++AAR+++V L P + AY LAP SR+A + Y V Sbjct: 182 AEMLAARLEVVAALQPHLTVAYGALAPHSRAATMEYTSGLFDDEFGGDPATATVAELEEA 241 Query: 254 XXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWSMXXXXXXXXXXXX 313 VCLVGPHRDDL+LRLG++PAKGFASHGESWS Sbjct: 242 MLAGLQRARSREIDRGVCLVGPHRDDLDLRLGNEPAKGFASHGESWSYALALRLASLELL 301 Query: 314 XXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIPSGWDARKVHIDLR 373 GS+PVLLLDDVFAELD RRTALA VA EQV+VTAAV ED+P AR + + Sbjct: 302 RAGGSDPVLLLDDVFAELDTKRRTALADVAAETEQVIVTAAVPEDLPPTLRARTFEVTVE 361 Query: 374 DSADGRVSVVQS 385 AD R+S ++S Sbjct: 362 GPADARISRLRS 373 >tr|D0LA35|D0LA35_GORB4 Tax_Id=526226 SubName: Full=DNA replication and repair protein RecF;[Gordonia bronchialis] Length = 397 Score = 358 bits (919), Expect = 6e-97 Identities = 198/387 (51%), Positives = 239/387 (61%), Gaps = 4/387 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++VR L LRDFRSW ADLEL TVF G NGFGKTNI+EAL Y ATL SHRV TDAPL Sbjct: 1 MFVRELHLRDFRSWRTADLELAAEPTVFTGRNGFGKTNILEALQYLATLRSHRVSTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 + +GA A+++ V N GRE L I A ANKA +N P R REVIG+LR VLFAPE Sbjct: 61 VHSGATSALVTATVENSGRELTAQLRINAEGANKASINNGPPRRAREVIGILRTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGA- 179 DL+LVRGDP DRRR++D+L R P R+DYD+VLRQR ALLK+ A RG A Sbjct: 121 DLSLVRGDPTDRRRFIDELVAQRGPLHVAARSDYDRVLRQRAALLKTAGAAMRRGGGDAA 180 Query: 180 --LDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXX 237 + TLDVWD++LA+HGA + AAR+D++ L P V +AY +AP SR +AY Sbjct: 181 SVISTLDVWDAQLAEHGAAVTAARVDVLNELRPHVTEAYASIAPHSRPTDLAYLPAAGPD 240 Query: 238 XXXXXXXXXRV-TXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHG 296 V VCLVGPHRDD+ + LGD AKGFASHG Sbjct: 241 VLPPAGARADVAAIGETLLAQLAQVRTKEIERGVCLVGPHRDDVGIILGDDIAKGFASHG 300 Query: 297 ESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVL 356 ESWS+ +G EPV++LDDVFAELDA RR LA AEQ+LVTAAV Sbjct: 301 ESWSLALALRLGSVALTRAEGVEPVIMLDDVFAELDATRRRKLATFTSDAEQLLVTAAVA 360 Query: 357 EDIPSGWDARKVHIDLRDSADGRVSVV 383 EDIP R++ +++ D ADGR SV+ Sbjct: 361 EDIPDEIGGRRIGVEVLDDADGRRSVL 387 >sp|Q8FUL4|RECF_COREF Tax_Id=152794 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium efficiens] Length = 398 Score = 358 bits (918), Expect = 8e-97 Identities = 197/391 (50%), Positives = 254/391 (64%), Gaps = 9/391 (2%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +Y+R L LRDFRSW +EL PG T+F+G NGFGKTNI+EA+ Y A L SHRV TDAPL Sbjct: 1 MYIRSLELRDFRSWPELKVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHRVSTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +RA A A IS + VN GRE A L I AN+ ++NR+ V+S RE++GV++ VLFAPE Sbjct: 61 VRANAGDARISAVAVNQGRELAAHLLIKPHAANQGQINRTRVKSPRELLGVIKTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRG----- 175 DLALVRG+PA+RRRYLDD+ RRP +AGV+ADYDKVL+QR ALLK+ + A RG Sbjct: 121 DLALVRGEPAERRRYLDDIIATRRPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 176 DRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXX 235 AL TLD WD +LA+ GAE+MAAR LV+ L+ ++ AYQ +APESR AA+ Y+ Sbjct: 181 GAAALATLDTWDGQLARLGAEVMAARFALVQDLSSQIRDAYQTIAPESRPAAVNYKTTID 240 Query: 236 XXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASH 295 + + LVGPHRDDLEL LG QPAKGFASH Sbjct: 241 QGLAQFGEFDAGI-IEATLLTELAAKRQREIERGMSLVGPHRDDLELHLGGQPAKGFASH 299 Query: 296 GESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAV 355 GE+WS DG++P+L+LDDVF+ELDA RR L +A AEQV++TAAV Sbjct: 300 GETWSFALSMRIAEFNLLRSDGTDPILILDDVFSELDAGRREKLVGIARDAEQVIITAAV 359 Query: 356 LEDIPSGW-DA--RKVHIDLRDSADGRVSVV 383 +D+P+ DA + + +RD+ GR+S++ Sbjct: 360 SDDLPANLADAITARHTVTVRDTDAGRISLL 390 >tr|C8NRV3|C8NRV3_COREF Tax_Id=196164 (recF)SubName: Full=RecF protein;[Corynebacterium efficiens YS-314] Length = 398 Score = 358 bits (918), Expect = 8e-97 Identities = 197/391 (50%), Positives = 254/391 (64%), Gaps = 9/391 (2%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +Y+R L LRDFRSW +EL PG T+F+G NGFGKTNI+EA+ Y A L SHRV TDAPL Sbjct: 1 MYIRSLELRDFRSWPELKVELKPGITIFIGRNGFGKTNIVEAIGYLAHLSSHRVSTDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +RA A A IS + VN GRE A L I AN+ ++NR+ V+S RE++GV++ VLFAPE Sbjct: 61 VRANAGDARISAVAVNQGRELAAHLLIKPHAANQGQINRTRVKSPRELLGVIKTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRG----- 175 DLALVRG+PA+RRRYLDD+ RRP +AGV+ADYDKVL+QR ALLK+ + A RG Sbjct: 121 DLALVRGEPAERRRYLDDIIATRRPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 176 DRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXX 235 AL TLD WD +LA+ GAE+MAAR LV+ L+ ++ AYQ +APESR AA+ Y+ Sbjct: 181 GAAALATLDTWDGQLARLGAEVMAARFALVQDLSSQIRDAYQTIAPESRPAAVNYKTTID 240 Query: 236 XXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASH 295 + + LVGPHRDDLEL LG QPAKGFASH Sbjct: 241 QGLAQFGEFDAGI-IEATLLTELAAKRQREIERGMSLVGPHRDDLELHLGGQPAKGFASH 299 Query: 296 GESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAV 355 GE+WS DG++P+L+LDDVF+ELDA RR L +A AEQV++TAAV Sbjct: 300 GETWSFALSMRIAEFNLLRSDGTDPILILDDVFSELDAGRREKLVGIARDAEQVIITAAV 359 Query: 356 LEDIPSGW-DA--RKVHIDLRDSADGRVSVV 383 +D+P+ DA + + +RD+ GR+S++ Sbjct: 360 SDDLPANLADAITARHTVTVRDTDAGRISLL 390 >tr|D1ADA3|D1ADA3_THECU Tax_Id=471852 SubName: Full=DNA replication and repair protein RecF;[Thermomonospora curvata DSM 43183] Length = 379 Score = 355 bits (912), Expect = 4e-96 Identities = 192/361 (53%), Positives = 237/361 (65%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 ++V HL L+DFRS+A A++ L PG +VFVGPNG GKTN++EA+ Y A SHRV TDAPL Sbjct: 1 MHVAHLSLQDFRSYATAEIALEPGVSVFVGPNGQGKTNLMEAIGYVAAHSSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 IR GA RA++ VV D R+ ++LEI GR+N+ARLNR+PV RE++G+LR VLFAPE Sbjct: 61 IRQGAPRAIVRAGVVRDDRKALIELEINPGRSNRARLNRAPVPRPREILGMLRTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDRGAL 180 DLALV+GDP +RRR+LD+L T R P +AGVRADYD+VLRQR ALLKS + R L Sbjct: 121 DLALVKGDPGERRRFLDELLTARAPRLAGVRADYDRVLRQRNALLKSAAAHRRPPGPEML 180 Query: 181 DTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXXXX 240 TL+VWDS LA+ GAEL+AAR+ LV L+P KAY LAP A++AYR Sbjct: 181 ATLEVWDSHLARVGAELLAARLKLVADLSPLAAKAYAALAPGGGIASLAYRSSLGERLPE 240 Query: 241 XXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGESWS 300 R T V LVGPHRD+L L+LG PA+GFASHGESWS Sbjct: 241 DRMPVPRQTLAPLIEEALREVRRQELERGVSLVGPHRDELVLQLGGMPARGFASHGESWS 300 Query: 301 MXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLEDIP 360 + DG +PVL+LDDVFAELD RR LA + AEQVL+TAAV D+P Sbjct: 301 LALALRLAAFELLRADGDDPVLILDDVFAELDTGRRRRLAELVAPAEQVLITAAVPADVP 360 Query: 361 S 361 + Sbjct: 361 A 361 >sp|A8LVH1|RECF_SALAI Tax_Id=391037 (recF)RecName: Full=DNA replication and repair protein recF;[Salinispora arenicola] Length = 376 Score = 351 bits (901), Expect = 8e-95 Identities = 196/363 (53%), Positives = 231/363 (63%), Gaps = 6/363 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVR L L DFRS+ ++L PG V VG NG GKTN+IEAL Y ATL SHRV TDAPL Sbjct: 1 MYVRRLELVDFRSYERVGVDLEPGANVLVGHNGVGKTNLIEALGYVATLDSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +R GA AVI VV++GRE ++LEI GRAN+ARL RSP R R+V+G LR VLFAPE Sbjct: 61 VRMGAGAAVIRCAVVHEGRELLIELEIVPGRANRARLGRSPARRARDVLGALRLVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDR--G 178 DL LVRGDPA+RRRYLDDL LR+P AGVRADY++V+RQR ALL++ AR G G Sbjct: 121 DLELVRGDPAERRRYLDDLLVLRQPRYAGVRADYERVVRQRNALLRTAYLARKTGGTRGG 180 Query: 179 ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXX 238 L TL VWD LA+HGAEL+A R+DLV LAP V +AY +A + +A IAYR Sbjct: 181 DLSTLAVWDDHLARHGAELLAGRLDLVAALAPHVTRAYDAVAAGTGAAGIAYR----PSV 236 Query: 239 XXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGES 298 R LVGPHRDDL L LG PAKG+ASHGES Sbjct: 237 ELPTPTTDRADLTAALSAALAAGRSAEIERGTTLVGPHRDDLTLTLGPLPAKGYASHGES 296 Query: 299 WSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLED 358 WS+ DG EPVL+LDDVFAELD RR LA++ A Q+LVT AV ED Sbjct: 297 WSLALALRLAGYDLLRVDGIEPVLVLDDVFAELDTGRRDRLAQLVGDASQLLVTCAVEED 356 Query: 359 IPS 361 +P+ Sbjct: 357 VPA 359 >sp|Q6M8X7|RECF_CORGL Tax_Id=1718 (recF)RecName: Full=DNA replication and repair protein recF;[Corynebacterium glutamicum] Length = 394 Score = 350 bits (898), Expect = 2e-94 Identities = 190/393 (48%), Positives = 254/393 (64%), Gaps = 13/393 (3%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +++R L LRD+RSW ++L PG TVF+G NGFGKTNI+EA+ Y A L SHRV +DAPL Sbjct: 1 MHIRSLELRDYRSWPELKVDLEPGITVFIGRNGFGKTNIVEAIGYLAHLSSHRVSSDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +RA A+ A +S + VN GRE A L I AN+A LNR+ VR+ RE++GV++ VLFAPE Sbjct: 61 VRAHAENARVSAVAVNQGRELAAHLLIKPHAANQASLNRTKVRTPRELLGVVKTVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRG----- 175 DLALV+G+PA+RRRYLDD+ R+P +AGV+ADYDKVL+QR ALLK+ + A RG Sbjct: 121 DLALVKGEPAERRRYLDDIIATRQPRMAGVKADYDKVLKQRNALLKTATIALRRGYGTEE 180 Query: 176 DRGALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXX 235 AL TLD WD +LA+ GAE+MAAR L+ L P++ +AY +APESR AA+ Y+ Sbjct: 181 GAAALSTLDTWDGQLARLGAEVMAARFALLNELGPKIYEAYTTIAPESRPAAVNYKTTID 240 Query: 236 XXXXXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASH 295 + LVGPHRDD++L LGDQPAKGFASH Sbjct: 241 QGLSQFSEFDAGIIEATLLTELAAKRQREIERGS-SLVGPHRDDVDLMLGDQPAKGFASH 299 Query: 296 GESWSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAV 355 GE+WS DG++P+L+LDDVF+ELDA RR L +A+ EQVL+TAAV Sbjct: 300 GETWSFALSLRIAEFNLLKSDGTDPILILDDVFSELDAGRREKLVGIAQEVEQVLITAAV 359 Query: 356 LEDIPSGWDARKV-----HIDLRDSADGRVSVV 383 +D+P + +KV + ++D+ GR+S++ Sbjct: 360 HDDLPE--NLKKVLTAQHTVTVQDTGTGRISLL 390 >sp|A4X0U0|RECF_SALTO Tax_Id=369723 (recF)RecName: Full=DNA replication and repair protein recF;[Salinispora tropica] Length = 377 Score = 348 bits (892), Expect = 8e-94 Identities = 194/363 (53%), Positives = 227/363 (62%), Gaps = 6/363 (1%) Query: 1 VYVRHLGLRDFRSWAHADLELGPGRTVFVGPNGFGKTNIIEALWYSATLGSHRVGTDAPL 60 +YVR L L DFRS+ ++L PG V VGPNG GKTN+IEAL Y ATL SHRV TDAPL Sbjct: 1 MYVRRLELVDFRSYERVGVDLEPGANVLVGPNGVGKTNLIEALGYVATLDSHRVATDAPL 60 Query: 61 IRAGADRAVISTIVVNDGRECAVDLEIAAGRANKARLNRSPVRSTREVIGVLRAVLFAPE 120 +R GA +I VV++GRE V+LEI GRAN+ARL RSP R R+V+G LR VLFAPE Sbjct: 61 VRMGAAAGIIRCAVVHEGRELLVELEIVPGRANRARLGRSPARRARDVLGALRLVLFAPE 120 Query: 121 DLALVRGDPADRRRYLDDLATLRRPTIAGVRADYDKVLRQRTALLKSVSGARFRGDR--G 178 DL LVRGDPA RRRYLDDL LR+P AGVR DY++V+RQR ALL++ AR G G Sbjct: 121 DLELVRGDPAQRRRYLDDLLVLRQPRYAGVRTDYERVVRQRNALLRTAYLARKTGGTRGG 180 Query: 179 ALDTLDVWDSRLAQHGAELMAARIDLVRLLAPEVEKAYQLLAPESRSAAIAYRXXXXXXX 238 L TL VWD LA+HGAEL+A R+DLV LAP V +AY +A + +A IAYR Sbjct: 181 DLSTLAVWDDHLARHGAELLAGRLDLVAALAPHVNRAYDAVAAGAGAAGIAYR----SSV 236 Query: 239 XXXXXXXXRVTXXXXXXXXXXXXXXXXXXXXVCLVGPHRDDLELRLGDQPAKGFASHGES 298 R LVGPHRD+L L LG PAKG+ASHGES Sbjct: 237 ELASSTADRADLTAALSDALAAGRTAEIERGTTLVGPHRDELTLTLGPLPAKGYASHGES 296 Query: 299 WSMXXXXXXXXXXXXXXDGSEPVLLLDDVFAELDAARRTALARVAESAEQVLVTAAVLED 358 WS DG EPVL+LDDVFAELD RR LA + A Q+LVT AV ED Sbjct: 297 WSFALALRLAGYDLLRADGIEPVLVLDDVFAELDTGRRDRLAELVGDASQLLVTCAVEED 356 Query: 359 IPS 361 +P+ Sbjct: 357 LPA 359 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,390,318,607 Number of extensions: 87384205 Number of successful extensions: 307773 Number of sequences better than 10.0: 2989 Number of HSP's gapped: 308822 Number of HSP's successfully gapped: 4097 Length of query: 385 Length of database: 3,846,993,858 Length adjustment: 139 Effective length of query: 246 Effective length of database: 2,279,740,641 Effective search space: 560816197686 Effective search space used: 560816197686 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 81 (35.8 bits)