BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0010 (142 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HI55|B2HI55_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 124 3e-27 tr|A0PKC1|A0PKC1_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 105 2e-21 tr|Q744Q4|Q744Q4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 82 3e-14 tr|A0Q8S5|A0Q8S5_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 79 2e-13 sp|P71577|Y008_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p... 75 2e-12 sp|P59977|Y008_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized p... 75 2e-12 tr|C6DQ83|C6DQ83_MYCTK Tax_Id=478434 SubName: Full=Membrane prot... 75 2e-12 tr|C1AJ05|C1AJ05_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 75 2e-12 tr|A5TY76|A5TY76_MYCTA Tax_Id=419947 SubName: Full=Putative memb... 75 2e-12 tr|A1KEE9|A1KEE9_MYCBP Tax_Id=410289 SubName: Full=Possible memb... 75 2e-12 tr|A5WI62|A5WI62_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 75 2e-12 tr|A2VMV0|A2VMV0_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 75 2e-12 tr|A4KN40|A4KN40_MYCTU Tax_Id=395095 SubName: Full=Membrane prot... 75 3e-12 tr|A0QNF5|A0QNF5_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 69 2e-10 tr|Q1BG53|Q1BG53_MYCSS Tax_Id=164756 SubName: Full=Putative memb... 66 1e-09 tr|A3PSE5|A3PSE5_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 66 1e-09 tr|A1U8S8|A1U8S8_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 66 1e-09 tr|A4T4U8|A4T4U8_MYCGI Tax_Id=350054 SubName: Full=Putative memb... 64 4e-09 tr|A1T117|A1T117_MYCVP Tax_Id=350058 SubName: Full=Putative memb... 60 6e-08 tr|B1ME62|B1ME62_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 42 0.022 >tr|B2HI55|B2HI55_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 142 Score = 124 bits (311), Expect = 3e-27 Identities = 68/100 (68%), Positives = 68/100 (68%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXX 60 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASEL Sbjct: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELRRRYRQGRLARE 60 Query: 61 XXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQVIQEARRKQGRSKRPW Sbjct: 61 VAAAQEAIAQELAAAQEVVANLPQVIQEARRKQGRSKRPW 100 >tr|A0PKC1|A0PKC1_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 134 Score = 105 bits (262), Expect = 2e-21 Identities = 57/92 (61%), Positives = 60/92 (65%) Query: 9 LTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXXXXXXXXXX 68 +TPRERLTRGLT+TAVGPVDVTRGVVGLGVHSAQSTASEL Sbjct: 1 MTPRERLTRGLTYTAVGPVDVTRGVVGLGVHSAQSTASELRRRYPQGRLAREVAAAQEAI 60 Query: 69 XXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQVIQEARRK+GRSKRPW Sbjct: 61 AQELAAAQEVVANLPQVIQEARRKRGRSKRPW 92 >tr|Q744Q4|Q744Q4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 144 Score = 81.6 bits (200), Expect = 3e-14 Identities = 44/100 (44%), Positives = 54/100 (54%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXX 60 M +AE RLTPRERL RGLT++ +GP+D+TRGV GL V SA+STA +L Sbjct: 1 MRAKAEDRLTPRERLARGLTYSTLGPLDLTRGVAGLSVQSARSTAEQLRRRYREGRLARD 60 Query: 61 XXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 LPQ +Q+ARR Q R KRPW Sbjct: 61 LAAAQETLAQELAAAQEVVTGLPQALQDARRAQRRGKRPW 100 >tr|A0Q8S5|A0Q8S5_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 144 Score = 79.0 bits (193), Expect = 2e-13 Identities = 43/100 (43%), Positives = 53/100 (53%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXX 60 M +AE RLTPRERL RGLT++ +GP+D+TRGV GL SA+STA +L Sbjct: 1 MRAKAEDRLTPRERLARGLTYSTLGPLDLTRGVAGLSGQSARSTAEQLRRRYREGRLARD 60 Query: 61 XXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 LPQ +Q+ARR Q R KRPW Sbjct: 61 LAAAQETLAQELAAAQEVVTGLPQALQDARRAQRRGKRPW 100 >sp|P71577|Y008_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv0008c/MT0010;[Mycobacterium tuberculosis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >sp|P59977|Y008_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb0008c;[Mycobacterium bovis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|C6DQ83|C6DQ83_MYCTK Tax_Id=478434 SubName: Full=Membrane protein;[Mycobacterium tuberculosis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|C1AJ05|C1AJ05_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|A5TY76|A5TY76_MYCTA Tax_Id=419947 SubName: Full=Putative membrane protein;[Mycobacterium tuberculosis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|A1KEE9|A1KEE9_MYCBP Tax_Id=410289 SubName: Full=Possible membrane protein;[Mycobacterium bovis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|A5WI62|A5WI62_MYCTF Tax_Id=336982 SubName: Full=Hypothetical membrane protein;[Mycobacterium tuberculosis] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|A2VMV0|A2VMV0_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 145 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLW 104 >tr|A4KN40|A4KN40_MYCTU Tax_Id=395095 SubName: Full=Membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 145 Score = 74.7 bits (182), Expect = 3e-12 Identities = 45/104 (43%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGV----VGLGVHSAQSTASELXXXXXXXX 56 MSEQ E RLTPRERLTRGL ++AVGPVDVTRG+ VGLG+ SA+STA+ L Sbjct: 1 MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGR 60 Query: 57 XXXXXXXXXXXXXXXXXXXXXXXXNLPQVIQEARRKQGRSKRPW 100 NLPQ +Q+AR ++ W Sbjct: 61 LAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRCSKHHLW 104 >tr|A0QNF5|A0QNF5_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 136 Score = 68.6 bits (166), Expect = 2e-10 Identities = 31/48 (64%), Positives = 41/48 (85%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASEL 48 M +A+ RL PR+RLTRGL +TAVGPVD+TRGV+G+G +AQ+TA+EL Sbjct: 1 MPARADVRLAPRQRLTRGLKYTAVGPVDITRGVLGIGADTAQATAAEL 48 >tr|Q1BG53|Q1BG53_MYCSS Tax_Id=164756 SubName: Full=Putative membrane protein;[Mycobacterium sp.] Length = 137 Score = 66.2 bits (160), Expect = 1e-09 Identities = 38/90 (42%), Positives = 47/90 (52%) Query: 9 LTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXXXXXXXXXX 68 LTPR+RL RGL +TAVGPVDVTRGV+G+GV SAQ+TA+EL Sbjct: 6 LTPRQRLARGLKYTAVGPVDVTRGVLGVGVDSAQATAAELRRRYQSGQLRRELAAARETL 65 Query: 69 XXXXXXXXXXXXNLPQVIQEARRKQGRSKR 98 LP+ + AR + R KR Sbjct: 66 VAELVAAQEAVSGLPEALTGARARNRRRKR 95 >tr|A3PSE5|A3PSE5_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 137 Score = 66.2 bits (160), Expect = 1e-09 Identities = 38/90 (42%), Positives = 47/90 (52%) Query: 9 LTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXXXXXXXXXX 68 LTPR+RL RGL +TAVGPVDVTRGV+G+GV SAQ+TA+EL Sbjct: 6 LTPRQRLARGLKYTAVGPVDVTRGVLGVGVDSAQATAAELRRRYQSGQLRRELAAARETL 65 Query: 69 XXXXXXXXXXXXNLPQVIQEARRKQGRSKR 98 LP+ + AR + R KR Sbjct: 66 VAELVAAQEAVSGLPEALTGARARNRRRKR 95 >tr|A1U8S8|A1U8S8_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 137 Score = 66.2 bits (160), Expect = 1e-09 Identities = 38/90 (42%), Positives = 47/90 (52%) Query: 9 LTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTASELXXXXXXXXXXXXXXXXXXXX 68 LTPR+RL RGL +TAVGPVDVTRGV+G+GV SAQ+TA+EL Sbjct: 6 LTPRQRLARGLKYTAVGPVDVTRGVLGVGVDSAQATAAELRRRYQSGQLRRELAAARETL 65 Query: 69 XXXXXXXXXXXXNLPQVIQEARRKQGRSKR 98 LP+ + AR + R KR Sbjct: 66 VAELVAAQEAVSGLPEALTGARARNRRRKR 95 >tr|A4T4U8|A4T4U8_MYCGI Tax_Id=350054 SubName: Full=Putative membrane protein;[Mycobacterium gilvum] Length = 133 Score = 64.3 bits (155), Expect = 4e-09 Identities = 31/46 (67%), Positives = 37/46 (80%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTAS 46 MS RLTPR+RL+RGL ++ VGPVDVTRG VGLGV SA+S+AS Sbjct: 1 MSSTTRERLTPRQRLSRGLKYSTVGPVDVTRGAVGLGVESARSSAS 46 >tr|A1T117|A1T117_MYCVP Tax_Id=350058 SubName: Full=Putative membrane protein;[Mycobacterium vanbaalenii] Length = 144 Score = 60.5 bits (145), Expect = 6e-08 Identities = 28/45 (62%), Positives = 35/45 (77%) Query: 1 MSEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTA 45 MS RLTP +RL+RGL ++ VGP+DVTRG VGLGV SA+S+A Sbjct: 1 MSSTTRVRLTPSQRLSRGLMYSTVGPIDVTRGAVGLGVESARSSA 45 >tr|B1ME62|B1ME62_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 134 Score = 42.0 bits (97), Expect = 0.022 Identities = 20/45 (44%), Positives = 27/45 (60%) Query: 2 SEQAEARLTPRERLTRGLTHTAVGPVDVTRGVVGLGVHSAQSTAS 46 SE+ +LT +RL RGL A+ P+DV+RG GL A+S S Sbjct: 7 SEEPAVKLTSGQRLARGLKEAALAPIDVSRGTAGLSFGLAKSATS 51 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.314 0.128 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 449,013,569 Number of extensions: 7901145 Number of successful extensions: 12328 Number of sequences better than 10.0: 20 Number of HSP's gapped: 12322 Number of HSP's successfully gapped: 20 Length of query: 142 Length of database: 3,846,993,858 Length adjustment: 106 Effective length of query: 36 Effective length of database: 2,651,822,340 Effective search space: 95465604240 Effective search space used: 95465604240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 75 (33.5 bits)