BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_0041
         (138 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HI86|B2HI86_MYCMM Tax_Id=216594 (whiB5)SubName: Full=Transc...   286   5e-76
tr|A0PKE6|A0PKE6_MYCUA Tax_Id=362242 (whiB5)SubName: Full=Transc...   281   1e-74
tr|A0Q8V2|A0Q8V2_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   234   2e-60
tr|Q9K528|Q9K528_MYCPA Tax_Id=1770 (0022c)SubName: Full=Putative...   233   7e-60
tr|Q7U301|Q7U301_MYCBO Tax_Id=1765 (whiB5)SubName: Full=PUTATIVE...   227   3e-58
tr|P71592|P71592_MYCTU Tax_Id=1773 (whiB5)SubName: Full=PROBABLE...   227   3e-58
tr|C6DQN3|C6DQN3_MYCTK Tax_Id=478434 SubName: Full=Transcription...   227   3e-58
tr|C1AJ19|C1AJ19_MYCBT Tax_Id=561275 (whiB5)SubName: Full=Probab...   227   3e-58
tr|A5TY93|A5TY93_MYCTA Tax_Id=419947 (whiB5)SubName: Full=Putati...   227   3e-58
tr|A1KEJ0|A1KEJ0_MYCBP Tax_Id=410289 (whiB5)SubName: Full=Putati...   227   3e-58
tr|A5WI76|A5WI76_MYCTF Tax_Id=336982 SubName: Full=Transcription...   227   3e-58
tr|A4KN54|A4KN54_MYCTU Tax_Id=395095 SubName: Full=Transcription...   227   3e-58
tr|A2VMW3|A2VMW3_MYCTU Tax_Id=348776 SubName: Full=Transcription...   227   3e-58
tr|A1UPK9|A1UPK9_MYCSK Tax_Id=189918 SubName: Full=Transcription...    45   0.002
tr|Q5YZR2|Q5YZR2_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    41   0.037
tr|C1B9A7|C1B9A7_RHOOB Tax_Id=632772 SubName: Full=Putative WhiB...    40   0.083
tr|Q1B0K7|Q1B0K7_MYCSS Tax_Id=164756 SubName: Full=Transcription...    37   0.54 
tr|A1UQE3|A1UQE3_MYCSK Tax_Id=189918 SubName: Full=Transcription...    37   0.54 
tr|C7RR92|C7RR92_9PROT Tax_Id=522306 SubName: Full=Tetratricopep...    37   0.92 
tr|C4E8S2|C4E8S2_STRRS Tax_Id=479432 SubName: Full=Transcription...    37   0.92 
tr|C0U819|C0U819_9ACTO Tax_Id=526225 SubName: Full=Transcription...    36   1.2  
tr|Q49871|Q49871_MYCLE Tax_Id=1769 (whiB3)SubName: Full=Putative...    36   1.6  
tr|Q0S3B6|Q0S3B6_RHOSR Tax_Id=101510 SubName: Full=Possible tran...    36   1.6  
tr|C5BZX1|C5BZX1_BEUC1 Tax_Id=471853 SubName: Full=Transcription...    36   1.6  
tr|C1B079|C1B079_RHOOB Tax_Id=632772 SubName: Full=WhiB family r...    36   1.6  
tr|B8ZUD3|B8ZUD3_MYCLB Tax_Id=561304 (whiB3)SubName: Full=Putati...    36   1.6  
tr|A8LAY3|A8LAY3_FRASN Tax_Id=298653 SubName: Full=Transcription...    36   1.6  
tr|Q82DI0|Q82DI0_STRAW Tax_Id=33903 (wblB)SubName: Full=Putative...    35   2.0  
tr|A6W4J5|A6W4J5_KINRD Tax_Id=266940 SubName: Full=Transcription...    35   2.0  
tr|A1SGU6|A1SGU6_NOCSJ Tax_Id=196162 SubName: Full=Transcription...    35   2.0  
tr|A0LVT2|A0LVT2_ACIC1 Tax_Id=351607 SubName: Full=Transcription...    35   2.0  
tr|C9YUX9|C9YUX9_STRSW Tax_Id=680198 (whiD)SubName: Full=Putativ...    35   2.0  
tr|C7M2G4|C7M2G4_ACIFD Tax_Id=525909 SubName: Full=Transcription...    35   2.0  
tr|B5I910|B5I910_9ACTO Tax_Id=463191 SubName: Full=WhiB-family t...    35   2.0  
tr|Q7TVH4|Q7TVH4_MYCBO Tax_Id=1765 (whiB6)SubName: Full=PUTATIVE...    35   2.7  
tr|Q2W8M7|Q2W8M7_MAGSA Tax_Id=342108 SubName: Full=Methyl-accept...    35   2.7  
tr|Q2W575|Q2W575_MAGSA Tax_Id=342108 SubName: Full=Methyl-accept...    35   2.7  
tr|Q0RRL8|Q0RRL8_FRAAA Tax_Id=326424 SubName: Full=Putative WhiB...    35   2.7  
tr|P96215|P96215_MYCTU Tax_Id=1773 (whiB6)SubName: Full=POSSIBLE...    35   2.7  
tr|C6DP92|C6DP92_MYCTK Tax_Id=478434 SubName: Full=Transcription...    35   2.7  
tr|C1AIW8|C1AIW8_MYCBT Tax_Id=561275 (whiB6)SubName: Full=Putati...    35   2.7  
tr|B7GRC7|B7GRC7_BIFLI Tax_Id=391904 SubName: Full=Transcription...    35   2.7  
tr|A5U9J0|A5U9J0_MYCTA Tax_Id=419947 (whiB6)SubName: Full=Putati...    35   2.7  
tr|A1KQJ7|A1KQJ7_MYCBP Tax_Id=410289 (whiB6)SubName: Full=Putati...    35   2.7  
tr|A5WU83|A5WU83_MYCTF Tax_Id=336982 SubName: Full=Transcription...    35   2.7  
tr|A4KMX8|A4KMX8_MYCTU Tax_Id=395095 SubName: Full=Transcription...    35   2.7  
tr|A2VMN7|A2VMN7_MYCTU Tax_Id=348776 SubName: Full=Transcription...    35   2.7  
tr|C5XUL9|C5XUL9_SORBI Tax_Id=4558 (Sb04g003360)SubName: Full=Pu...    35   2.7  
tr|Q73S05|Q73S05_MYCPA Tax_Id=1770 (whiB3)SubName: Full=WhiB3;[M...    35   3.5  
tr|C6WLV7|C6WLV7_ACTMD Tax_Id=446462 SubName: Full=Transcription...    35   3.5  

>tr|B2HI86|B2HI86_MYCMM Tax_Id=216594 (whiB5)SubName:
           Full=Transcriptional regulatory protein (Whib-like),
           WhiB5;[Mycobacterium marinum]
          Length = 138

 Score =  286 bits (732), Expect = 5e-76
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH
Sbjct: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120
           REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV
Sbjct: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120

Query: 121 TAVVWHLPVTQVGPQTAA 138
           TAVVWHLPVTQVGPQTAA
Sbjct: 121 TAVVWHLPVTQVGPQTAA 138


>tr|A0PKE6|A0PKE6_MYCUA Tax_Id=362242 (whiB5)SubName:
           Full=Transcriptional regulatory protein (Whib-like),
           WhiB5;[Mycobacterium ulcerans]
          Length = 138

 Score =  281 bits (720), Expect = 1e-74
 Identities = 136/138 (98%), Positives = 136/138 (98%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH
Sbjct: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120
           REEYGVWAGV LPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV
Sbjct: 61  REEYGVWAGVNLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120

Query: 121 TAVVWHLPVTQVGPQTAA 138
           TAV WHLPVTQVGPQTAA
Sbjct: 121 TAVGWHLPVTQVGPQTAA 138


>tr|A0Q8V2|A0Q8V2_MYCA1 Tax_Id=243243 SubName: Full=Transcription
           factor WhiB family protein;[Mycobacterium avium]
          Length = 138

 Score =  234 bits (597), Expect = 2e-60
 Identities = 111/138 (80%), Positives = 122/138 (88%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M +PCA NPELWFGYPDDD GDGAAKARAYERSATEARIQCLRRCPLAQQR CA+ AV H
Sbjct: 1   MGHPCAANPELWFGYPDDDGGDGAAKARAYERSATEARIQCLRRCPLAQQRRCAQHAVAH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120
           REEYGVWAGVKLPGGQYRKR QLA AH+VLRRIA+GEIN+RQLPEN ALLAR+E + V  
Sbjct: 61  REEYGVWAGVKLPGGQYRKREQLAHAHEVLRRIASGEINSRQLPENAALLARHEHETVAA 120

Query: 121 TAVVWHLPVTQVGPQTAA 138
            AVV HLP+ +VGP++AA
Sbjct: 121 PAVVLHLPLAKVGPRSAA 138


>tr|Q9K528|Q9K528_MYCPA Tax_Id=1770 (0022c)SubName: Full=Putative
           uncharacterized protein; SubName: Full=Putative
           uncharacterized protein 0022c;[Mycobacterium
           paratuberculosis]
          Length = 138

 Score =  233 bits (593), Expect = 7e-60
 Identities = 110/138 (79%), Positives = 121/138 (87%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M +PCA NPELWFGYPDDD GDGAAKARAYERSATEARIQCLRRCPLAQQR CA+ AV H
Sbjct: 1   MGHPCAANPELWFGYPDDDGGDGAAKARAYERSATEARIQCLRRCPLAQQRRCAQHAVAH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNERDAVPV 120
           REEYG WAGVKLPGGQYRKR QLA AH+VLRRIA+GEIN+RQLPEN ALLAR+E + V  
Sbjct: 61  REEYGAWAGVKLPGGQYRKREQLAHAHEVLRRIASGEINSRQLPENAALLARHEHETVAA 120

Query: 121 TAVVWHLPVTQVGPQTAA 138
            AVV HLP+ +VGP++AA
Sbjct: 121 PAVVLHLPLAKVGPRSAA 138


>tr|Q7U301|Q7U301_MYCBO Tax_Id=1765 (whiB5)SubName: Full=PUTATIVE
           TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE
           WHIB5;[Mycobacterium bovis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|P71592|P71592_MYCTU Tax_Id=1773 (whiB5)SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE
           WHIB5;[Mycobacterium tuberculosis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|C6DQN3|C6DQN3_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator whib-like whiB5;[Mycobacterium tuberculosis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|C1AJ19|C1AJ19_MYCBT Tax_Id=561275 (whiB5)SubName: Full=Probable
           transcriptional regulatory protein
           whiB-like;[Mycobacterium bovis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A5TY93|A5TY93_MYCTA Tax_Id=419947 (whiB5)SubName: Full=Putative
           transcriptional regulatory protein whib-like
           WhiB5;[Mycobacterium tuberculosis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A1KEJ0|A1KEJ0_MYCBP Tax_Id=410289 (whiB5)SubName: Full=Putative
           transcriptional regulatory protein whiB-like
           whiB5;[Mycobacterium bovis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A5WI76|A5WI76_MYCTF Tax_Id=336982 SubName: Full=Transcriptional
           regulatory protein whib-like whiB5;[Mycobacterium
           tuberculosis]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A4KN54|A4KN54_MYCTU Tax_Id=395095 SubName: Full=Transcriptional
           regulatory protein whib-like whiB5;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A2VMW3|A2VMW3_MYCTU Tax_Id=348776 SubName: Full=Transcriptional
           regulatory protein whib-like whiB5;[Mycobacterium
           tuberculosis C]
          Length = 139

 Score =  227 bits (579), Expect = 3e-58
 Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
           M++PCAT+PELWFGYPDDD  DGAAKARAYERSAT+ARIQCLRRCPL QQR CA+ AV+H
Sbjct: 1   MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEH 60

Query: 61  REEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQLPENTALLARNE-RDAVP 119
           R EYGVWAG+KLPGGQYRKR QLA AHDVLRRIA GEIN+RQLP+N ALLARNE  +  P
Sbjct: 61  RVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTP 120

Query: 120 VTAVVWHLPVTQVGPQTAA 138
           V  VV HLP+ QVGPQ AA
Sbjct: 121 VPGVVVHLPIAQVGPQPAA 139


>tr|A1UPK9|A1UPK9_MYCSK Tax_Id=189918 SubName: Full=Transcription
          factor WhiB;[Mycobacterium sp.]
          Length = 234

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 19/70 (27%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C T+P+ WF     DSG           + T A  +CL  CP   +R CA+RA+K++  +
Sbjct: 19 CHTDPDRWF-----DSG-----------ARTAALAECLA-CP--HRRWCAQRALKYQPRW 59

Query: 65 GVWAGVKLPG 74
          G+WAG+ +PG
Sbjct: 60 GMWAGIWIPG 69


>tr|Q5YZR2|Q5YZR2_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 244

 Score = 41.2 bits (95), Expect = 0.037
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 16/65 (24%)

Query: 8   NPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVW 67
           +PELW  +PD DS   A           +ARI CL  CP+  +  C E A K+ E +GVW
Sbjct: 84  DPELW--HPDRDSDPAA-----------DARITCLS-CPVRDK--CGEHAAKNAEPHGVW 127

Query: 68  AGVKL 72
            G ++
Sbjct: 128 GGYRM 132


>tr|C1B9A7|C1B9A7_RHOOB Tax_Id=632772 SubName: Full=Putative WhiB
           family regulatory protein;[Rhodococcus opacus]
          Length = 240

 Score = 40.0 bits (92), Expect = 0.083
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 6/70 (8%)

Query: 5   CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
           CA N +    +P  ++G    +    + S T+AR  C   CP+  +R CA+ A+ ++E Y
Sbjct: 38  CAGNRQPDIFFPKRNAG---RENPTRDASITKARKFC-NHCPV--RRECAQSALDNKEYY 91

Query: 65  GVWAGVKLPG 74
           GVWAGV L G
Sbjct: 92  GVWAGVYLSG 101


>tr|Q1B0K7|Q1B0K7_MYCSS Tax_Id=164756 SubName: Full=Transcription
          factor WhiB;[Mycobacterium sp.]
          Length = 110

 Score = 37.4 bits (85), Expect = 0.54
 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 44 RCPLAQQRLCAERAVKHREEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIA 94
          RCP+  +R CA  AV + EE G +AGV LP       G+ A A D LR IA
Sbjct: 46 RCPV--RRRCATEAVLNDEETGTYAGVYLPQNISANVGRRAAAIDELRVIA 94


>tr|A1UQE3|A1UQE3_MYCSK Tax_Id=189918 SubName: Full=Transcription
          factor WhiB;[Mycobacterium sp.]
          Length = 110

 Score = 37.4 bits (85), Expect = 0.54
 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 44 RCPLAQQRLCAERAVKHREEYGVWAGVKLPGGQYRKRGQLAEAHDVLRRIA 94
          RCP+  +R CA  AV + EE G +AGV LP       G+ A A D LR IA
Sbjct: 46 RCPV--RRRCATEAVLNDEETGTYAGVYLPQNISANVGRRAAAIDELRVIA 94


>tr|C7RR92|C7RR92_9PROT Tax_Id=522306 SubName:
           Full=Tetratricopeptide TPR_4; Flags:
           Precursor;[Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 605

 Score = 36.6 bits (83), Expect = 0.92
 Identities = 47/164 (28%), Positives = 60/164 (36%), Gaps = 36/164 (21%)

Query: 2   SNPCATNPELWF--GYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAER--- 56
           S   A +PE WF      +  GD  A  RAY ++   A         LA+ R+  ER   
Sbjct: 242 SERVADDPEAWFWLAVASEAQGDWPAAERAYRQALVRAPGDVTSGLGLARARINQERFDE 301

Query: 57  --------AVKHREEYGVWAGVKLPGGQYRKRGQLAEAHDVL---RRIAAGEINARQLPE 105
                       RE+  VW  +   G    +RGQ   A D L    R+A     A+ L  
Sbjct: 302 ALAGARELLASQREDTRVWTMI---GWIEIRRGQAPAAADALAEAMRLAPWNTGAQHL-- 356

Query: 106 NTALLARNERD-------------AVPVTAVVW-HLPVTQVGPQ 135
             A LA N RD             A P  A++W  L   Q G Q
Sbjct: 357 -AATLAVNRRDWPTGVRLFRQLTRAEPANALLWIQLAEAQYGAQ 399


>tr|C4E8S2|C4E8S2_STRRS Tax_Id=479432 SubName: Full=Transcription
          factor WhiB-like protein;[Streptosporangium roseum DSM
          43021]
          Length = 89

 Score = 36.6 bits (83), Expect = 0.92
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 17/66 (25%)

Query: 4  PCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREE 63
          PC T+P+LWF    +D                 A+  C   CP+  Q+ C  RA++  E 
Sbjct: 16 PCRTDPDLWFAESPED--------------VEFAKALC-GGCPI--QQACLARALEREEP 58

Query: 64 YGVWAG 69
          +GVW G
Sbjct: 59 WGVWGG 64


>tr|C0U819|C0U819_9ACTO Tax_Id=526225 SubName: Full=Transcription
          factor WhiB;[Geodermatophilus obscurus DSM 43160]
          Length = 99

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C       F +PD + G     ARA  +SA +A      RCP+ +   C + A+  RE Y
Sbjct: 23 CRGESTALFFHPDGERGP----ARARRQSAAKA---VCSRCPVIES--CLKHALSVREPY 73

Query: 65 GVWAGV 70
          GVW G+
Sbjct: 74 GVWGGM 79


>tr|Q49871|Q49871_MYCLE Tax_Id=1769 (whiB3)SubName: Full=Putative
           transcriptional regulator; SubName:
           Full=WhiB;[Mycobacterium leprae]
          Length = 102

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 13  FGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGVKL 72
           F +PD + G      RA  +    A+  C RRCP+ ++  C   A+   E YGVW G+  
Sbjct: 31  FFHPDGERG------RARMQREQRAKEMC-RRCPVIEE--CRAHALDVGEPYGVWGGLSE 81

Query: 73  PGGQYRKRGQLAEAHDVLR 91
                  +G LA +  + R
Sbjct: 82  SERDLLLKGDLARSRSIPR 100


>tr|Q0S3B6|Q0S3B6_RHOSR Tax_Id=101510 SubName: Full=Possible
          transcriptional regulator, WhiB family
          protein;[Rhodococcus sp.]
          Length = 97

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)

Query: 13 FGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGV 70
          F +PD + G      RA  +  T A+  C RRCP+  Q  C   A+   E YG+W G+
Sbjct: 31 FFHPDGERG------RARAQRETRAKEMC-RRCPVLAQ--CRNHALSVSEPYGIWGGM 79


>tr|C5BZX1|C5BZX1_BEUC1 Tax_Id=471853 SubName: Full=Transcription
          factor WhiB;[Beutenbergia cavernae]
          Length = 99

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%)

Query: 9  PELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWA 68
          P L+F +P+ + G    +  A  ++   A       CP+ QQ  C E A++ RE YGVW 
Sbjct: 28 PSLFF-HPEGERGSARRRRDAAAKAICAA-------CPVLQQ--CREHALRVREPYGVWG 77

Query: 69 GV 70
          G+
Sbjct: 78 GM 79


>tr|C1B079|C1B079_RHOOB Tax_Id=632772 SubName: Full=WhiB family
          regulatory protein;[Rhodococcus opacus]
          Length = 97

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)

Query: 13 FGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGV 70
          F +PD + G      RA  +  T A+  C RRCP+  Q  C   A+   E YG+W G+
Sbjct: 31 FFHPDGERG------RARAQRETRAKEMC-RRCPVLAQ--CRNHALSVSEPYGIWGGM 79


>tr|B8ZUD3|B8ZUD3_MYCLB Tax_Id=561304 (whiB3)SubName: Full=Putative
           transcriptional regulator;[Mycobacterium leprae]
          Length = 102

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 13  FGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGVKL 72
           F +PD + G      RA  +    A+  C RRCP+ ++  C   A+   E YGVW G+  
Sbjct: 31  FFHPDGERG------RARMQREQRAKEMC-RRCPVIEE--CRAHALDVGEPYGVWGGLSE 81

Query: 73  PGGQYRKRGQLAEAHDVLR 91
                  +G LA +  + R
Sbjct: 82  SERDLLLKGDLARSRSIPR 100


>tr|A8LAY3|A8LAY3_FRASN Tax_Id=298653 SubName: Full=Transcription
          factor WhiB;[Frankia sp.]
          Length = 110

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 10/61 (16%)

Query: 10 ELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAG 69
          EL+F +P+ + G     ARA   +A +A      RCP+   R C E A+  RE YGVW G
Sbjct: 29 ELFF-HPEGERGP----ARAAREAAAKA---ICARCPVI--RACGEHALAAREPYGVWGG 78

Query: 70 V 70
          +
Sbjct: 79 M 79


>tr|Q82DI0|Q82DI0_STRAW Tax_Id=33903 (wblB)SubName: Full=Putative
          WhiB-family transcriptional regulator; putative role in
          cell cycle control;[Streptomyces avermitilis]
          Length = 109

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 21 GDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGV 70
          G+  A   A E SA E    C+R CP+  Q  CA  A+  RE YGVW G+
Sbjct: 36 GERGAARSARENSAKEV---CMR-CPVRAQ--CAAHALAVREPYGVWGGL 79


>tr|A6W4J5|A6W4J5_KINRD Tax_Id=266940 SubName: Full=Transcription
          factor WhiB;[Kineococcus radiotolerans]
          Length = 101

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 8  NPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVW 67
          +PEL+F +P+ + G       A  +    A +     CP+ +Q  C +  + HRE YGVW
Sbjct: 27 DPELFF-HPELERG-------AARQHRDAAALAVCAECPVLRQ--CRQHVLTHRENYGVW 76

Query: 68 AGV 70
           G+
Sbjct: 77 GGL 79


>tr|A1SGU6|A1SGU6_NOCSJ Tax_Id=196162 SubName: Full=Transcription
          factor WhiB;[Nocardioides sp.]
          Length = 107

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 18/67 (26%)

Query: 4  PC-ATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHRE 62
          PC A NPELWF     D                 A+  C + CP+  + +C + A++ RE
Sbjct: 33 PCRANNPELWFAESPSD--------------VEHAKTLC-QDCPV--RAMCLDGALERRE 75

Query: 63 EYGVWAG 69
           +GVW G
Sbjct: 76 PWGVWGG 82


>tr|A0LVT2|A0LVT2_ACIC1 Tax_Id=351607 SubName: Full=Transcription
          factor WhiB;[Acidothermus cellulolyticus]
          Length = 102

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 22/84 (26%)

Query: 4  PCA-TNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHRE 62
          PC   NPE++F   +D      AKA               RRCP  ++  C + A++ RE
Sbjct: 29 PCLQVNPEIFFA--EDPEDIDVAKALC-------------RRCP--RRVACLDDALQRRE 71

Query: 63 EYGVWAGVKLPGG----QYRKRGQ 82
           +GVW G    GG    Q R RG+
Sbjct: 72 PWGVWGGELFSGGRVVSQKRPRGR 95


>tr|C9YUX9|C9YUX9_STRSW Tax_Id=680198 (whiD)SubName: Full=Putative
          WhiB family regulatory protein;[Streptomyces scabies]
          Length = 111

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 21 GDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGV 70
          G+  A   A E SA E    C+R CP+  Q  CA  A+  RE YGVW G+
Sbjct: 36 GERGAARSARENSAKEV---CMR-CPVRAQ--CAAHALAVREPYGVWGGL 79


>tr|C7M2G4|C7M2G4_ACIFD Tax_Id=525909 SubName: Full=Transcription
          factor WhiB;[Acidimicrobium ferrooxidans]
          Length = 90

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 16 PDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAG 69
          P+D   +G A+ R  E SA     +   RCP+A +  C E A+++RE  G+W G
Sbjct: 23 PEDPRMEGLAQRRQREASAK----RICARCPVAGE--CLEWALENRETRGIWGG 70


>tr|B5I910|B5I910_9ACTO Tax_Id=463191 SubName: Full=WhiB-family
          transcriptional regulator;[Streptomyces sviceus ATCC
          29083]
          Length = 108

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 21 GDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGV 70
          G+  A   A E SA E    C+R CP+  Q  CA  A+  RE YGVW G+
Sbjct: 36 GERGAARSARENSAKEV---CMR-CPVRAQ--CAAHALAVREPYGVWGGL 79


>tr|Q7TVH4|Q7TVH4_MYCBO Tax_Id=1765 (whiB6)SubName: Full=PUTATIVE
          TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE
          WHIB6;[Mycobacterium bovis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|Q2W8M7|Q2W8M7_MAGSA Tax_Id=342108 SubName: Full=Methyl-accepting
           chemotaxis protein;[Magnetospirillum magneticum]
          Length = 436

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 65  GVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQL 103
           GV  GVK+ G   R  G L+ A  VL R A+G++NAR L
Sbjct: 49  GVVGGVKIGGSARRMAGDLSTAIHVLSRSASGDLNARIL 87


>tr|Q2W575|Q2W575_MAGSA Tax_Id=342108 SubName: Full=Methyl-accepting
           chemotaxis protein;[Magnetospirillum magneticum]
          Length = 436

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 65  GVWAGVKLPGGQYRKRGQLAEAHDVLRRIAAGEINARQL 103
           GV  GVK+ G   R  G L+ A  VL R A+G++NAR L
Sbjct: 49  GVVGGVKIGGSARRMAGDLSTAIHVLSRSASGDLNARIL 87


>tr|Q0RRL8|Q0RRL8_FRAAA Tax_Id=326424 SubName: Full=Putative
          WhiB-family transcriptional regulator; putative role in
          cell cycle control;[Frankia alni]
          Length = 110

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 10/61 (16%)

Query: 10 ELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAG 69
          EL+F +P+ + G     ARA   +A +A      RCP+   R C E A+  RE YGVW G
Sbjct: 29 ELFF-HPEGERGP----ARAAREAAAKA---ICARCPVI--RACGEYALTAREPYGVWGG 78

Query: 70 V 70
          +
Sbjct: 79 L 79


>tr|P96215|P96215_MYCTU Tax_Id=1773 (whiB6)SubName: Full=POSSIBLE
          TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB6;
          SubName: Full=Putative uncharacterized
          protein;[Mycobacterium tuberculosis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|C6DP92|C6DP92_MYCTK Tax_Id=478434 SubName:
          Full=Transcriptional regulator whiB-like
          whiB6;[Mycobacterium tuberculosis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|C1AIW8|C1AIW8_MYCBT Tax_Id=561275 (whiB6)SubName:
          Full=Putative transcriptional regulatory protein
          WhiB-like;[Mycobacterium bovis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|B7GRC7|B7GRC7_BIFLI Tax_Id=391904 SubName: Full=Transcription
          factor WhiB;[Bifidobacterium longum subsp. infantis]
          Length = 94

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 12/78 (15%)

Query: 21 GDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGVKLPGGQYRKR 80
          GDGA     Y R  TE   Q    CP+  +  C  +A++  E+YG+W G+        +R
Sbjct: 24 GDGA-----YAREMTEIAKQACLSCPVRAE--CLRQALETGEQYGIWGGM-----TPEER 71

Query: 81 GQLAEAHDVLRRIAAGEI 98
            LA      RR AA  +
Sbjct: 72 RDLARRDMRRRRFAAARM 89


>tr|A5U9J0|A5U9J0_MYCTA Tax_Id=419947 (whiB6)SubName:
          Full=Putative transcriptional regulatory protein
          whib-like WhiB6;[Mycobacterium tuberculosis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|A1KQJ7|A1KQJ7_MYCBP Tax_Id=410289 (whiB6)SubName:
          Full=Putative transcriptional regulatory protein
          whiB-like whiB6;[Mycobacterium bovis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|A5WU83|A5WU83_MYCTF Tax_Id=336982 SubName:
          Full=Transcriptional regulatory protein whiB-like
          whiB6;[Mycobacterium tuberculosis]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|A4KMX8|A4KMX8_MYCTU Tax_Id=395095 SubName:
          Full=Transcriptional regulatory protein whiB-like
          whiB6;[Mycobacterium tuberculosis str. Haarlem]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|A2VMN7|A2VMN7_MYCTU Tax_Id=348776 SubName:
          Full=Transcriptional regulatory protein whiB-like
          whiB6;[Mycobacterium tuberculosis C]
          Length = 116

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 20/69 (28%)

Query: 5  CATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEY 64
          C  +P+ W   PDD                 EA+  C R CP  ++ LCA  AV+     
Sbjct: 34 CTQDPDRWTTTPDD-----------------EAKTLC-RACP--RRWLCARDAVESAGAE 73

Query: 65 GVWAGVKLP 73
          G+WAGV +P
Sbjct: 74 GLWAGVVIP 82


>tr|C5XUL9|C5XUL9_SORBI Tax_Id=4558 (Sb04g003360)SubName:
           Full=Putative uncharacterized protein
           Sb04g003360;[Sorghum bicolor]
          Length = 422

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 16/99 (16%)

Query: 3   NPCATNPELWFGYPDDDSGDG-----AAKARAYERSATEARIQCLRRCPLAQQRLCAERA 57
           NP    P++ FG+ +DD+G G     AAK +  +  ATEAR   L    + ++    ER+
Sbjct: 243 NPFEDKPKVKFGFDEDDTGTGEKKDEAAKNKGKDVKATEARRSALDDL-MKEEEKAKERS 301

Query: 58  VKHREEYGVWAGVKL--------PGGQYRKRGQLAEAHD 88
             +R++Y +  G+ +          G Y+++G + +  D
Sbjct: 302 --NRKDYWLCPGIVVKVMSKTLAEKGYYKQKGVVKKVID 338


>tr|Q73S05|Q73S05_MYCPA Tax_Id=1770 (whiB3)SubName:
           Full=WhiB3;[Mycobacterium paratuberculosis]
          Length = 102

 Score = 34.7 bits (78), Expect = 3.5
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 13  FGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKHREEYGVWAGVKL 72
           F +PD + G      RA  +    A+  C R+CP+ Q+  C   A++  E YGVW G+  
Sbjct: 31  FFHPDGERG------RARMQREQRAKEMC-RQCPVIQE--CRSHALEVGEPYGVWGGLSE 81

Query: 73  PGGQYRKRGQLAEAHDVLR 91
                  +G++     + R
Sbjct: 82  SERDLLLKGEIGRGRGIRR 100


>tr|C6WLV7|C6WLV7_ACTMD Tax_Id=446462 SubName: Full=Transcription
          factor WhiB;[Actinosynnema mirum]
          Length = 111

 Score = 34.7 bits (78), Expect = 3.5
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 1  MSNPCATNPELWFGYPDDDSGDGAAKARAYERSATEARIQCLRRCPLAQQRLCAERAVKH 60
          M   C      +F +PD + G   A+  A       A+  CL  CP+ +  +C   A+  
Sbjct: 32 MRGSCRGMDSAFFFHPDGERGPARARREA------RAKAVCLS-CPVLE--MCRRHALAV 82

Query: 61 REEYGVWAGV 70
          +E YG+W G+
Sbjct: 83 QEPYGIWGGL 92


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.318    0.132    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,078,511,041
Number of extensions: 38524181
Number of successful extensions: 86457
Number of sequences better than 10.0: 86
Number of HSP's gapped: 87098
Number of HSP's successfully gapped: 86
Length of query: 138
Length of database: 3,846,993,858
Length adjustment: 103
Effective length of query: 35
Effective length of database: 2,685,647,949
Effective search space: 93997678215
Effective search space used: 93997678215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)