BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_0042
         (263 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HI87|B2HI87_MYCMM Tax_Id=216594 SubName: Full=Transcription...   465   e-129
tr|A0PKE7|A0PKE7_MYCUA Tax_Id=362242 SubName: Full=Transcription...   449   e-124
sp|P67704|Y023_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized H...   383   e-104
sp|P67705|Y023_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized H...   383   e-104
tr|C6DQN4|C6DQN4_MYCTK Tax_Id=478434 SubName: Full=Transcription...   383   e-104
tr|C1AJ20|C1AJ20_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   383   e-104
tr|A5TY94|A5TY94_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   383   e-104
tr|A1KEJ1|A1KEJ1_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   383   e-104
tr|A5WI77|A5WI77_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   383   e-104
tr|A2VMW4|A2VMW4_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   383   e-104
tr|A0Q8V3|A0Q8V3_MYCA1 Tax_Id=243243 SubName: Full=Helix-turn-he...   382   e-104
tr|Q744U3|Q744U3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   379   e-103
tr|A4KN55|A4KN55_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   327   8e-88
tr|Q9K527|Q9K527_MYCPA Tax_Id=1770 (0023)SubName: Full=Putative ...   207   1e-51
tr|Q2RHG2|Q2RHG2_MOOTA Tax_Id=264732 SubName: Full=Transcription...    52   9e-05
tr|D1C1D8|D1C1D8_9CHLR Tax_Id=479434 SubName: Full=Transcription...    50   3e-04
tr|C8WXB5|C8WXB5_ALIAD Tax_Id=521098 SubName: Full=Transcription...    48   0.001
tr|B7DQW2|B7DQW2_9BACL Tax_Id=543302 SubName: Full=Transcription...    48   0.001
tr|A3KKG4|A3KKG4_STRAM Tax_Id=278992 SubName: Full=Putative regu...    48   0.001
tr|B8FE71|B8FE71_DESAA Tax_Id=439235 SubName: Full=Transcription...    47   0.002
tr|A8AGJ2|A8AGJ2_CITK8 Tax_Id=290338 SubName: Full=Putative unch...    47   0.002
tr|C2WCR0|C2WCR0_BACCE Tax_Id=526986 SubName: Full=Transcription...    47   0.003
tr|Q46QV6|Q46QV6_RALEJ Tax_Id=264198 SubName: Full=Helix-turn-he...    46   0.004
tr|A8RH93|A8RH93_9CLOT Tax_Id=411902 SubName: Full=Putative unch...    46   0.004
tr|Q5YR27|Q5YR27_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...    46   0.005
tr|A5D3C9|A5D3C9_PELTS Tax_Id=370438 SubName: Full=Hypothetical ...    46   0.005
tr|D1C5P9|D1C5P9_9CHLR Tax_Id=479434 SubName: Full=Transcription...    46   0.005
tr|Q0SGJ5|Q0SGJ5_RHOSR Tax_Id=101510 SubName: Full=Possible tran...    45   0.006
tr|C5CXM5|C5CXM5_VARPS Tax_Id=543728 SubName: Full=Transcription...    45   0.006
tr|B8DZN1|B8DZN1_DICTD Tax_Id=515635 SubName: Full=Transcription...    45   0.006
tr|C9R8Y2|C9R8Y2_AMMDK Tax_Id=429009 SubName: Full=Transcription...    45   0.006
tr|Q3J069|Q3J069_RHOS4 Tax_Id=272943 SubName: Full=Transcription...    45   0.008
tr|O86784|O86784_STRCO Tax_Id=1902 SubName: Full=Putative unchar...    45   0.008
tr|C5D0L3|C5D0L3_VARPS Tax_Id=543728 SubName: Full=Transcription...    45   0.008
tr|B9KL60|B9KL60_RHOSK Tax_Id=557760 SubName: Full=Transcription...    45   0.008
tr|A3PM30|A3PM30_RHOS1 Tax_Id=349101 SubName: Full=Transcription...    45   0.008
tr|A0QNI2|A0QNI2_MYCS2 Tax_Id=246196 SubName: Full=Putative unch...    45   0.008
tr|Q0F379|Q0F379_9PROT Tax_Id=314345 SubName: Full=Putative unch...    45   0.008
tr|C7LVP9|C7LVP9_DESBD Tax_Id=525897 SubName: Full=Transcription...    45   0.008
tr|B4VBI6|B4VBI6_9ACTO Tax_Id=465541 SubName: Full=Transcription...    45   0.008
tr|C5CVI4|C5CVI4_VARPS Tax_Id=543728 SubName: Full=Transcription...    45   0.011
tr|D1A8D2|D1A8D2_THECU Tax_Id=471852 SubName: Full=Transcription...    45   0.011
tr|C1YJT0|C1YJT0_NOCDA Tax_Id=446468 SubName: Full=Predicted tra...    45   0.011
sp|P77626|YDCN_ECOLI Tax_Id=83333 (ydcN)RecName: Full=Uncharacte...    44   0.014
tr|Q8X9V8|Q8X9V8_ECO57 Tax_Id=83334 (ydcN)SubName: Full=Putative...    44   0.014
tr|Q8FHL4|Q8FHL4_ECOL6 Tax_Id=217992 (ydcN)SubName: Full=Putativ...    44   0.014
tr|Q3Z1G6|Q3Z1G6_SHISS Tax_Id=300269 (ydcN)SubName: Full=Putativ...    44   0.014
tr|Q32FP6|Q32FP6_SHIDS Tax_Id=300267 (ydcN)SubName: Full=Putativ...    44   0.014
tr|Q1RBY3|Q1RBY3_ECOUT Tax_Id=364106 (ydcN)SubName: Full=Putativ...    44   0.014
tr|B2NDL1|B2NDL1_ECOLX Tax_Id=344610 SubName: Full=Helix-turn-he...    44   0.014

>tr|B2HI87|B2HI87_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 263

 Score =  465 bits (1197), Expect = e-129
 Identities = 242/263 (92%), Positives = 243/263 (92%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    SPRRPGVVVVDRHSDTDVLEGYAEAQLDALR
Sbjct: 61  PGTYSRLLVAADPEAELARLLAARPTETASPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT
Sbjct: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA
Sbjct: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240

Query: 241 FVDGSTESSQQQDPGCDDGEGQR 263
           FVDGSTESSQQQDPGCDDGEGQR
Sbjct: 241 FVDGSTESSQQQDPGCDDGEGQR 263


>tr|A0PKE7|A0PKE7_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 263

 Score =  449 bits (1155), Expect = e-124
 Identities = 235/263 (89%), Positives = 239/263 (90%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSR+LV                    SPRR GVVVVDRHSDTDVLEGYAEAQLDALR
Sbjct: 61  PGTYSRMLVAADPEAELARLLAARPTETASPRRRGVVVVDRHSDTDVLEGYAEAQLDALR 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPASTSNEY+TYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT
Sbjct: 121 SVIDRLPASTSNEYDTYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           RTALLERMPASLSARFDRACA SQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA
Sbjct: 181 RTALLERMPASLSARFDRACALSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240

Query: 241 FVDGSTESSQQQDPGCDDGEGQR 263
           FVDGSTESS+QQ PG DDGEGQR
Sbjct: 241 FVDGSTESSEQQGPGYDDGEGQR 263


>sp|P67704|Y023_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Rv0023/MT0026;[Mycobacterium tuberculosis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>sp|P67705|Y023_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator Mb0023;[Mycobacterium
           bovis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|C6DQN4|C6DQN4_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|C1AJ20|C1AJ20_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|A5TY94|A5TY94_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|A1KEJ1|A1KEJ1_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|A5WI77|A5WI77_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|A2VMW4|A2VMW4_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 256

 Score =  383 bits (984), Expect = e-104
 Identities = 200/255 (78%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+ALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALLERMP SLSARFDRACAQS LP+AV+AALIGV +DE+WDIRNRGVIP GALPR+RA
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDIRNRGVIPAGALPRVRA 240

Query: 241 FVDGSTESSQQQDPG 255
           FVD + E+S   D G
Sbjct: 241 FVD-AIEASHDADEG 254


>tr|A0Q8V3|A0Q8V3_MYCA1 Tax_Id=243243 SubName: Full=Helix-turn-helix
           domain protein;[Mycobacterium avium]
          Length = 262

 Score =  382 bits (981), Expect = e-104
 Identities = 197/261 (75%), Positives = 216/261 (82%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVSIMGLSYLERGARKPHK TVQK+ENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSIMGLSYLERGARKPHKSTVQKIENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                      RR G VVVDRHSDT+VLEGYAEAQLDAL+
Sbjct: 61  PGTYSRLLVAADPEAELARLMAAQPVAEMPARRTGPVVVDRHSDTEVLEGYAEAQLDALK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAE+LAASSWRVAVNAG++S+ RLMEHLQALEAT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAELLAASSWRVAVNAGADSTGRLMEHLQALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALL+RMP SLSARFDRACAQS LP+ +IAAL+GVD DE+WDIRNRGVI P ALPR+RA
Sbjct: 181 RVALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDIRNRGVISPSALPRVRA 240

Query: 241 FVDGSTESSQQQDPGCDDGEG 261
           F D    +S+ +    DD EG
Sbjct: 241 FTDAVESASRDEASQGDDEEG 261


>tr|Q744U3|Q744U3_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 262

 Score =  379 bits (973), Expect = e-103
 Identities = 196/261 (75%), Positives = 214/261 (81%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVSIMGLSYLERGARKPHK TVQK+ENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSIMGLSYLERGARKPHKSTVQKIENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                      RR G VVVDRHSDT+VLEGYAEAQLDAL+
Sbjct: 61  PGTYSRLLVAADPEAELARLMAAQPAAEMPARRTGPVVVDRHSDTEVLEGYAEAQLDALK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           S IDRLPA+TSNEYETYILSV+AQCVKAE+LAASSWRVAVNAG++S+ RLMEHLQALEAT
Sbjct: 121 SAIDRLPATTSNEYETYILSVIAQCVKAELLAASSWRVAVNAGADSTGRLMEHLQALEAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRA 240
           R ALL+RMP SLSARFDRACAQS LP+ +IAAL+GVD DE+WDIRNRGVI P ALPR+RA
Sbjct: 181 RVALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDIRNRGVISPSALPRVRA 240

Query: 241 FVDGSTESSQQQDPGCDDGEG 261
           F D    +S+      DD EG
Sbjct: 241 FTDAVESASRNGASRGDDEEG 261


>tr|A4KN55|A4KN55_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 252

 Score =  327 bits (838), Expect = 8e-88
 Identities = 171/214 (79%), Positives = 184/214 (85%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVS MGLSYLERGARKPHK TVQKVENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                    + RR G VVVDRHSDTDVLEGYAEAQLDA++
Sbjct: 61  PGTYSRLLVAADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIK 120

Query: 121 SVIDRLPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEAT 180
           SVIDRLPA+TSNEYETYILSV+AQCVKAEMLAASSWRVAVNAG++S+ RLMEHL+AL+AT
Sbjct: 121 SVIDRLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALKAT 180

Query: 181 RTALLERMPASLSARFDRACAQSQLPDAVIAALI 214
           R ALLERMP SLSARFDRACAQS LP+AV+AALI
Sbjct: 181 RGALLERMPTSLSARFDRACAQSSLPEAVVAALI 214


>tr|Q9K527|Q9K527_MYCPA Tax_Id=1770 (0023)SubName: Full=Putative
           uncharacterized protein 0023; Flags:
           Fragment;[Mycobacterium paratuberculosis]
          Length = 146

 Score =  207 bits (526), Expect = 1e-51
 Identities = 109/141 (77%), Positives = 114/141 (80%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           +SRESAGAAIRALRES DWSLADLAAATGVSIMGLSYLERGARKPHK TVQK+ENGLGLP
Sbjct: 1   MSRESAGAAIRALRESRDWSLADLAAATGVSIMGLSYLERGARKPHKSTVQKIENGLGLP 60

Query: 61  PGTYSRLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALR 120
           PGTYSRLLV                      RR G VVVDRHSDT+VLEGYAEAQLDAL+
Sbjct: 61  PGTYSRLLVAADPEAELARLMAAQPAAEMPARRTGPVVVDRHSDTEVLEGYAEAQLDALK 120

Query: 121 SVIDRLPASTSNEYETYILSV 141
           S IDRLPA+TSNEYETYILSV
Sbjct: 121 SAIDRLPATTSNEYETYILSV 141


>tr|Q2RHG2|Q2RHG2_MOOTA Tax_Id=264732 SubName:
          Full=Transcriptional regulator, XRE family;[Moorella
          thermoacetica]
          Length = 252

 Score = 51.6 bits (122), Expect = 9e-05
 Identities = 27/54 (50%), Positives = 33/54 (61%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          G  IR LRE   +SL DLA   GVS+  LS +ERGA++P   T+ KV   L LP
Sbjct: 5  GKRIRELREERGYSLQDLAQRAGVSVSYLSEIERGAKRPSLKTLDKVARALNLP 58



 Score = 37.0 bits (84), Expect = 2.2
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 7   GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           G  IR LRE    +L  LA A G+S+  LS +ERG   P   T++K+   L +P
Sbjct: 74  GERIRLLRERAGKNLNTLAEAAGISVSYLSEIERGNVYPAIDTLKKITAALEVP 127


>tr|D1C1D8|D1C1D8_9CHLR Tax_Id=479434 SubName:
          Full=Transcriptional regulator, XRE
          family;[Sphaerobacter thermophilus DSM 20745]
          Length = 125

 Score = 50.1 bits (118), Expect = 3e-04
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 3  RESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPG 62
          RE+ GA IR LR +  WSL DL+ A+G+S+  LS +ERG + P    + ++   L L  G
Sbjct: 9  REAVGATIRGLRLTRGWSLRDLSQASGISVPYLSEIERGRKDPSGAVLAQLAEALDLSLG 68


>tr|C8WXB5|C8WXB5_ALIAD Tax_Id=521098 SubName:
          Full=Transcriptional regulator, XRE
          family;[Alicyclobacillus acidocaldarius subsp.
          acidocaldarius]
          Length = 145

 Score = 47.8 bits (112), Expect = 0.001
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query: 3  RESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          ++S GA +RA+R+S  WS  +LA   GVS   +S +ER  R+P     +++ + LG+P
Sbjct: 2  KDSFGARVRAIRQSRGWSQQELAMRAGVSTPHISSIERDKRRPSLDYAKRLADALGVP 59


>tr|B7DQW2|B7DQW2_9BACL Tax_Id=543302 SubName:
          Full=Transcriptional regulator, XRE
          family;[Alicyclobacillus acidocaldarius LAA1]
          Length = 145

 Score = 47.8 bits (112), Expect = 0.001
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query: 3  RESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          ++S GA +RA+R+S  WS  +LA   GVS   +S +ER  R+P     +++ + LG+P
Sbjct: 2  KDSFGARVRAIRQSRGWSQQELAMRAGVSTPHISSIERDKRRPSLDYAKRLADALGVP 59


>tr|A3KKG4|A3KKG4_STRAM Tax_Id=278992 SubName: Full=Putative
          regulatory protein AfsR-like;[Streptomyces ambofaciens
          ATCC 23877]
          Length = 797

 Score = 47.8 bits (112), Expect = 0.001
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGAR-KPHKGTVQKVENGLGLPPGTYS 65
          G  +R+LR +   ++  LA A+GVS+ G+  LERG R  P + TV  + +GLGL P    
Sbjct: 34 GPLLRSLRLAASLTIEGLAEASGVSVRGIGDLERGRRAAPQRRTVAAIADGLGLGPADRD 93

Query: 66 RLL 68
          RLL
Sbjct: 94 RLL 96


>tr|B8FE71|B8FE71_DESAA Tax_Id=439235 SubName: Full=Transcriptional
           regulator, XRE family;[Desulfatibacillum alkenivorans]
          Length = 527

 Score = 47.4 bits (111), Expect = 0.002
 Identities = 25/66 (37%), Positives = 36/66 (54%)

Query: 1   VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
           VS  S GA I+ LRE HDW+   LA ATG +   ++ +E     P    + ++   LG+ 
Sbjct: 349 VSDSSFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGID 408

Query: 61  PGTYSR 66
           PGT+ R
Sbjct: 409 PGTFLR 414


>tr|A8AGJ2|A8AGJ2_CITK8 Tax_Id=290338 SubName: Full=Putative
          uncharacterized protein;[Citrobacter koseri]
          Length = 178

 Score = 47.4 bits (111), Expect = 0.002
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ALR+  +WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKALRQQREWSLSRLAEATGVSKAMLGQIERNESSPTVSTLWKIATGLNVPFSTF 66


>tr|C2WCR0|C2WCR0_BACCE Tax_Id=526986 SubName:
          Full=Transcriptional regulator, Xre;[Bacillus cereus
          Rock3-44]
          Length = 190

 Score = 46.6 bits (109), Expect = 0.003
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 4  ESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGT 63
          +  G  +R +R     SL +LA  TGVS + L  +ERG   P  G + K+  GL +P   
Sbjct: 14 QQVGQLLRKIRNEQKLSLEELAQKTGVSKLTLGKIERGETNPTLGVIWKITKGLSIP--- 70

Query: 64 YSRLLV 69
          +SRL+V
Sbjct: 71 FSRLMV 76


>tr|Q46QV6|Q46QV6_RALEJ Tax_Id=264198 SubName:
          Full=Helix-turn-helix motif;[Ralstonia eutropha]
          Length = 188

 Score = 46.2 bits (108), Expect = 0.004
 Identities = 23/51 (45%), Positives = 30/51 (58%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          +R  RES +WSLADLA  +GVS   +S +ERG   P    + K+    GLP
Sbjct: 16 VRVERESREWSLADLAERSGVSKAMISKIERGEASPTATVLGKLSGAFGLP 66


>tr|A8RH93|A8RH93_9CLOT Tax_Id=411902 SubName: Full=Putative
          uncharacterized protein;[Clostridium bolteae ATCC
          BAA-613]
          Length = 184

 Score = 46.2 bits (108), Expect = 0.004
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
          G  IR LR+    +L D+A ATG+SI  +S LERGA +P   +++KV   LG+ P
Sbjct: 3  GEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP 57


>tr|Q5YR27|Q5YR27_NOCFA Tax_Id=37329 SubName: Full=Putative
          uncharacterized protein;[Nocardia farcinica]
          Length = 201

 Score = 45.8 bits (107), Expect = 0.005
 Identities = 21/42 (50%), Positives = 31/42 (73%)

Query: 4  ESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKP 45
          E+ G  +RALR+  + +L +L+AATG+S+  LS LE GAR+P
Sbjct: 6  EAVGPRLRALRKQRETTLGELSAATGISVSTLSRLESGARRP 47


>tr|A5D3C9|A5D3C9_PELTS Tax_Id=370438 SubName: Full=Hypothetical
           transcriptional regulator;[Pelotomaculum
           thermopropionicum]
          Length = 255

 Score = 45.8 bits (107), Expect = 0.005
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 5   SAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
           S G  IR LR   + SL +LA A+G+S+  LS +ERG   P   T++++  GL +PP
Sbjct: 73  SLGDKIRMLRAEKNMSLQELAQASGISLSYLSEIERGTVYPALTTLKRIAAGLSVPP 129



 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/53 (41%), Positives = 33/53 (62%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGL 59
          G  IRALRE   ++L DLA  T +S+  LS +ERG+++P   T+ K+   L +
Sbjct: 5  GEQIRALREERGYTLQDLARRTNLSLSYLSEIERGSKRPSLKTIDKLAAALNV 57



 Score = 37.0 bits (84), Expect = 2.2
 Identities = 18/55 (32%), Positives = 32/55 (58%)

Query: 7   GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
           G  +RALRE +  + A LA+  GV+   +  +E+G  +P   T++K+   +G+ P
Sbjct: 140 GCKLRALREEYGLTQAQLASMAGVTAGLIGQIEQGKVQPSLKTLEKIAEVMGVTP 194


>tr|D1C5P9|D1C5P9_9CHLR Tax_Id=479434 SubName:
          Full=Transcriptional regulator, XRE
          family;[Sphaerobacter thermophilus DSM 20745]
          Length = 131

 Score = 45.8 bits (107), Expect = 0.005
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 3  RESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPG 62
          R+  G AIR LR+    SL+DLA  TG+S+  LS LE+G   P    + ++ N LG+  G
Sbjct: 16 RQRIGPAIRRLRQQQGLSLSDLAERTGISVSYLSRLEKGRSVPSFTLLSRLGNELGVDIG 75

Query: 63 TY 64
           +
Sbjct: 76 FF 77


>tr|Q0SGJ5|Q0SGJ5_RHOSR Tax_Id=101510 SubName: Full=Possible
          transcriptional regulator;[Rhodococcus sp.]
          Length = 115

 Score = 45.4 bits (106), Expect = 0.006
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 3  RESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          RE  G  +R  R   D SL D+AAA G+S   LS +ERG ++P    ++ V   LGLP
Sbjct: 24 RELYGRVLREARRDQDRSLEDVAAAVGMSKQYLSEIERGKKEPSSEMLRAVCGALGLP 81


>tr|C5CXM5|C5CXM5_VARPS Tax_Id=543728 SubName:
          Full=Transcriptional regulator, XRE family;[Variovorax
          paradoxus]
          Length = 190

 Score = 45.4 bits (106), Expect = 0.006
 Identities = 23/54 (42%), Positives = 34/54 (62%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          G  +RALR + D S  +LA  +G+S   LS +ERG   P   T++++ NGLG+P
Sbjct: 10 GTQVRALRMAADVSGGELAKTSGISASMLSRIERGLVSPSVETLERLANGLGVP 63


>tr|B8DZN1|B8DZN1_DICTD Tax_Id=515635 SubName:
          Full=Transcriptional regulator, XRE
          family;[Dictyoglomus turgidum]
          Length = 105

 Score = 45.4 bits (106), Expect = 0.006
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 5  SAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          + G  IR +R+ H+  L DLA  TG+S+  +S +ERG + P    ++++   L LP
Sbjct: 2  NVGKRIREIRKKHNMKLEDLAEKTGLSLSYISLIERGLKNPSLKALERIAQALNLP 57


>tr|C9R8Y2|C9R8Y2_AMMDK Tax_Id=429009 SubName: Full=Transcriptional
           regulator, XRE family;[Ammonifex degensii]
          Length = 256

 Score = 45.4 bits (106), Expect = 0.006
 Identities = 23/60 (38%), Positives = 33/60 (55%)

Query: 5   SAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
           + G  IR LR    WSL +LA   G+S   LS +ERG   P   T++++   LG+ P T+
Sbjct: 73  NVGERIRLLRTEKGWSLQELACRAGISASYLSEIERGTVYPSLSTLKRLAEELGVAPVTF 132



 Score = 42.7 bits (99), Expect = 0.040
 Identities = 22/53 (41%), Positives = 31/53 (58%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGL 59
          G  IRALRE    SL DLA    +S+  LS +ERG ++P   T++K+   L +
Sbjct: 5  GERIRALREEKGMSLHDLARKAQISLSYLSEIERGTKRPSLRTIEKLAQALNV 57



 Score = 40.8 bits (94), Expect = 0.15
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 7   GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
           GA +RALRE +  + A LAA  GV+   +  +E+G  +P   T++K+   +G+ P
Sbjct: 140 GARLRALREEYGLTQAQLAAMAGVTAGLIGQIEQGKVQPSLKTLEKIAQAMGVSP 194


>tr|Q3J069|Q3J069_RHOS4 Tax_Id=272943 SubName:
          Full=Transcriptional regulator, XRE family;[Rhodobacter
          sphaeroides]
          Length = 211

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 2  SRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
          S    G  +R +R++   SL+ L+  +GVS+  LS LERG  +P   T++++   LG+PP
Sbjct: 3  SNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVPP 62


>tr|O86784|O86784_STRCO Tax_Id=1902 SubName: Full=Putative
          uncharacterized protein SCO4743;[Streptomyces
          coelicolor]
          Length = 201

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 22/41 (53%), Positives = 30/41 (73%)

Query: 5  SAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKP 45
          S GA +RA+R++   +LA LAAATG+S+  LS LE G R+P
Sbjct: 13 SLGARLRAIRQARGLTLAQLAAATGISVSTLSRLESGQREP 53


>tr|C5D0L3|C5D0L3_VARPS Tax_Id=543728 SubName:
          Full=Transcriptional regulator, XRE family;[Variovorax
          paradoxus]
          Length = 187

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query: 1  VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          +S    GA ++ALR + D S   LA  +G+S   LS +ERG   P   T++++ NGLG+P
Sbjct: 1  MSAARIGAQVKALRMAADVSGGALAKTSGISASMLSRIERGLVSPSVETLERLANGLGVP 60

Query: 61 PGTY 64
             +
Sbjct: 61 ASRF 64


>tr|B9KL60|B9KL60_RHOSK Tax_Id=557760 SubName:
          Full=Transcriptional regulator, XRE family;[Rhodobacter
          sphaeroides]
          Length = 211

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 2  SRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
          S    G  +R +R++   SL+ L+  +GVS+  LS LERG  +P   T++++   LG+PP
Sbjct: 3  SNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVPP 62


>tr|A3PM30|A3PM30_RHOS1 Tax_Id=349101 SubName:
          Full=Transcriptional regulator, XRE family;[Rhodobacter
          sphaeroides]
          Length = 211

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query: 2  SRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPP 61
          S    G  +R +R++   SL+ L+  +GVS+  LS LERG  +P   T++++   LG+PP
Sbjct: 3  SNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVPP 62


>tr|A0QNI2|A0QNI2_MYCS2 Tax_Id=246196 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium smegmatis]
          Length = 259

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 53/238 (22%), Positives = 87/238 (36%), Gaps = 1/238 (0%)

Query: 6   AGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTYS 65
           AGAA  A R   D S   LAA   ++   L   E+G   P + T  K+E  L  PPGT +
Sbjct: 20  AGAAAAARRRELDISQRSLAADGIINAGALIAFEKGRSWPRERTRLKLEEVLRWPPGTIA 79

Query: 66  RLLVXXXXXXXXXXXXXXXXXXXXSPRRPGVVVVDRHSDTDVLEGYAEAQLDALRSVIDR 125
           RL                      +     V  V    +  ++       +  L + I+ 
Sbjct: 80  RLRQGGSVPTTSAPVAPPPPPEPPAAAPAPVTSVPAADEVPLIAQAVLTAVHTLETTINA 139

Query: 126 LPASTSNEYETYILSVVAQCVKAEMLAASSWRVAVNAGSESSARLMEHLQALEATRTALL 185
           +P  +  ++   + +++    + E +A+ + R+++       A      Q  E T  A  
Sbjct: 140 MPPESDPDFVPRVTAILGDLRQLEAVASRAARISMVTPPLIKALSAVRRQIDELTMRA-A 198

Query: 186 ERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDIRNRGVIPPGALPRIRAFVD 243
               A+L  R   A  Q+ L  A  A   GV  D +        +   A+  I A +D
Sbjct: 199 NAPGATLGQRLYAARRQANLTVAETAQAAGVSEDAIARTEAEYPVDAAAVHAIEALID 256


>tr|Q0F379|Q0F379_9PROT Tax_Id=314345 SubName: Full=Putative
          uncharacterized protein;[Mariprofundus ferrooxydans
          PV-1]
          Length = 180

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 4  ESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGL 59
          ++ G  IR+LRE    S   LA A G+S   LS LE G   P   T++K+ +GLG+
Sbjct: 2  QNIGGTIRSLREQQGLSQRALAEAAGISAAALSQLEAGQTSPSVATLEKLADGLGI 57


>tr|C7LVP9|C7LVP9_DESBD Tax_Id=525897 SubName:
          Full=Transcriptional regulator, XRE
          family;[Desulfomicrobium baculatum]
          Length = 189

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 1  VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          +S+E  G  ++  RE ++ SL DLA  TG+ +  L  LE  +  P  G + KV  GLG+ 
Sbjct: 1  MSKEQLGKRVKRFREMNEISLEDLAQRTGLEVAFLKSLEDDSVYPSLGPLLKVARGLGVR 60

Query: 61 PGTY 64
           GT+
Sbjct: 61 MGTF 64


>tr|B4VBI6|B4VBI6_9ACTO Tax_Id=465541 SubName:
          Full=Transcriptional regulator;[Streptomyces sp. Mg1]
          Length = 192

 Score = 45.1 bits (105), Expect = 0.008
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 7  GAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTYSR 66
          G  IRA R+    S+A LAA +G+S   LS LERG   P   ++ ++   L + PGT+ R
Sbjct: 15 GRVIRAWRKRRGISMASLAAGSGLSQPFLSQLERGLATPSLSSIYRIAEALDVTPGTFLR 74


>tr|C5CVI4|C5CVI4_VARPS Tax_Id=543728 SubName:
          Full=Transcriptional regulator, XRE family;[Variovorax
          paradoxus]
          Length = 187

 Score = 44.7 bits (104), Expect = 0.011
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 1  VSRESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          +S    GA +RALR + + S   LA A+GVS   LS +ERG   P   T+++V  GL +P
Sbjct: 1  MSAARIGAQVRALRMAAEMSAGSLAKASGVSASMLSRIERGLVSPSVETLERVAQGLHVP 60


>tr|D1A8D2|D1A8D2_THECU Tax_Id=471852 SubName:
          Full=Transcriptional regulator, XRE
          family;[Thermomonospora curvata DSM 43183]
          Length = 187

 Score = 44.7 bits (104), Expect = 0.011
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLP 60
          +R+LR  H WSL  LA   GVS   L  LE+G   P+ GT+ ++   LG+P
Sbjct: 15 VRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQALGVP 65


>tr|C1YJT0|C1YJT0_NOCDA Tax_Id=446468 SubName: Full=Predicted
          transcriptional regulator;[Nocardiopsis dassonvillei
          subsp. dassonvillei DSM 43111]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.011
 Identities = 20/42 (47%), Positives = 31/42 (73%)

Query: 4  ESAGAAIRALRESHDWSLADLAAATGVSIMGLSYLERGARKP 45
          ++ G  +RALR+  + +L DL+AATG+S+  LS LE G+R+P
Sbjct: 10 DAVGPRLRALRKQKETTLTDLSAATGISVSTLSRLESGSRRP 51


>sp|P77626|YDCN_ECOLI Tax_Id=83333 (ydcN)RecName:
          Full=Uncharacterized HTH-type transcriptional regulator
          ydcN;[Escherichia coli]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|Q8X9V8|Q8X9V8_ECO57 Tax_Id=83334 (ydcN)SubName: Full=Putative
          uncharacterized protein ydcN; SubName: Full=Putative
          uncharacterized protein ECs2037;[Escherichia coli
          O157:H7]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|Q8FHL4|Q8FHL4_ECOL6 Tax_Id=217992 (ydcN)SubName: Full=Putative
          uncharacterized protein ydcN;[Escherichia coli O6]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|Q3Z1G6|Q3Z1G6_SHISS Tax_Id=300269 (ydcN)SubName: Full=Putative
          uncharacterized protein ydcN;[Shigella sonnei]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|Q32FP6|Q32FP6_SHIDS Tax_Id=300267 (ydcN)SubName: Full=Putative
          uncharacterized protein ydcN;[Shigella dysenteriae
          serotype 1]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|Q1RBY3|Q1RBY3_ECOUT Tax_Id=364106 (ydcN)SubName: Full=Putative
          uncharacterized protein ydcN;[Escherichia coli]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


>tr|B2NDL1|B2NDL1_ECOLX Tax_Id=344610 SubName:
          Full=Helix-turn-helix DNA-binding/cupin domain
          protein;[Escherichia coli 53638]
          Length = 178

 Score = 44.3 bits (103), Expect = 0.014
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 10 IRALRESHDWSLADLAAATGVSIMGLSYLERGARKPHKGTVQKVENGLGLPPGTY 64
          ++ LR+   WSL+ LA ATGVS   L  +ER    P   T+ K+  GL +P  T+
Sbjct: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.315    0.130    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,735,493,307
Number of extensions: 61536440
Number of successful extensions: 177387
Number of sequences better than 10.0: 885
Number of HSP's gapped: 178981
Number of HSP's successfully gapped: 892
Length of query: 263
Length of database: 3,846,993,858
Length adjustment: 135
Effective length of query: 128
Effective length of database: 2,324,841,453
Effective search space: 297579705984
Effective search space used: 297579705984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)