BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_0263
         (237 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HKM6|B2HKM6_MYCMM Tax_Id=216594 SubName: Full=Conserved mem...   426   e-118
tr|A0PWN3|A0PWN3_MYCUA Tax_Id=362242 SubName: Full=Conserved mem...   412   e-113
sp|Q10890|Y093_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p...   303   1e-80
tr|Q7U2V4|Q7U2V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER...   303   1e-80
tr|C6DQV7|C6DQV7_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...   303   1e-80
tr|C1AJB9|C1AJB9_MYCBT Tax_Id=561275 SubName: Full=Putative unch...   303   1e-80
tr|A5TYG6|A5TYG6_MYCTA Tax_Id=419947 SubName: Full=Putative cons...   303   1e-80
tr|A1KER4|A1KER4_MYCBP Tax_Id=410289 SubName: Full=Probable cons...   303   1e-80
tr|A5WIE8|A5WIE8_MYCTF Tax_Id=336982 SubName: Full=Conserved mem...   303   1e-80
tr|A4KNC1|A4KNC1_MYCTU Tax_Id=395095 SubName: Full=Conserved mem...   303   1e-80
tr|A2VN27|A2VN27_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   303   1e-80
tr|Q9CBG8|Q9CBG8_MYCLE Tax_Id=1769 SubName: Full=Probable integr...   258   4e-67
tr|B8ZSJ3|B8ZSJ3_MYCLB Tax_Id=561304 SubName: Full=Probable inte...   258   4e-67
tr|Q73YY9|Q73YY9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   152   4e-35
tr|B1ME37|B1ME37_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...   122   4e-26
tr|A0QFD5|A0QFD5_MYCA1 Tax_Id=243243 RecName: Full=RNA polymeras...   109   2e-22
tr|C6WL67|C6WL67_ACTMD Tax_Id=446462 SubName: Full=Putative inte...   106   2e-21
tr|C6WP38|C6WP38_ACTMD Tax_Id=446462 SubName: Full=Putative inte...   104   9e-21
tr|A4FBJ7|A4FBJ7_SACEN Tax_Id=405948 SubName: Full=Probable inte...   101   8e-20
tr|C4RBD6|C4RBD6_9ACTO Tax_Id=219305 SubName: Full=Putative unch...    89   5e-16
tr|A4X832|A4X832_SALTO Tax_Id=369723 SubName: Full=Putative unch...    82   5e-14
tr|C0U6T8|C0U6T8_9ACTO Tax_Id=526225 SubName: Full=Predicted int...    80   2e-13
tr|A8M5Q3|A8M5Q3_SALAI Tax_Id=391037 SubName: Full=Putative unch...    78   9e-13
tr|C4DT69|C4DT69_9ACTO Tax_Id=446470 SubName: Full=Predicted int...    52   5e-05
tr|C4LHI0|C4LHI0_CORK4 Tax_Id=645127 SubName: Full=Putative memb...    50   2e-04
tr|Q6NIB0|Q6NIB0_CORDI Tax_Id=1717 SubName: Full=Putative membra...    49   5e-04
tr|C0XQ47|C0XQ47_9CORY Tax_Id=525263 SubName: Full=Putative unch...    47   0.002
tr|Q4JU14|Q4JU14_CORJK Tax_Id=306537 SubName: Full=Putative memb...    46   0.003
tr|B9BER4|B9BER4_9BURK Tax_Id=513051 SubName: Full=Putative tran...    46   0.003
tr|B1VFH7|B1VFH7_CORU7 Tax_Id=504474 SubName: Full=Putative memb...    46   0.004
tr|Q8NRZ8|Q8NRZ8_CORGL Tax_Id=1718 SubName: Full=Hypothetical me...    45   0.005
tr|Q8FR05|Q8FR05_COREF Tax_Id=152794 SubName: Full=Putative unch...    45   0.005
tr|A4QCN0|A4QCN0_CORGB Tax_Id=340322 SubName: Full=Putative unch...    45   0.005
tr|Q6M6Q7|Q6M6Q7_CORGL Tax_Id=1718 SubName: Full=Putative membra...    45   0.005
tr|C8NND9|C8NND9_COREF Tax_Id=196164 SubName: Full=Membrane prot...    45   0.005
tr|C0VT06|C0VT06_9CORY Tax_Id=548477 SubName: Full=Putative unch...    45   0.005
tr|C8RQL9|C8RQL9_CORJE Tax_Id=525262 SubName: Full=Membrane prot...    45   0.007
tr|C0E7V1|C0E7V1_9CORY Tax_Id=566549 SubName: Full=Putative unch...    45   0.009
tr|C5VBK4|C5VBK4_9CORY Tax_Id=553207 SubName: Full=Putative unch...    44   0.011
tr|C2GIL5|C2GIL5_9CORY Tax_Id=548478 SubName: Full=Putative unch...    44   0.015
tr|A9AJW0|A9AJW0_BURM1 Tax_Id=395019 SubName: Full=Anti-sigma fa...    44   0.019
tr|C8NW09|C8NW09_9CORY Tax_Id=585529 SubName: Full=Membrane prot...    44   0.019
tr|B9C722|B9C722_9BURK Tax_Id=513053 SubName: Full=Putative tran...    43   0.025
tr|B9BYC5|B9BYC5_9BURK Tax_Id=513052 SubName: Full=Putative tran...    43   0.025
tr|B5RYT2|B5RYT2_RALSO Tax_Id=305 SubName: Full=Cog5662, predict...    42   0.043
tr|A3RT07|A3RT07_RALSO Tax_Id=342110 SubName: Full=Putative unch...    42   0.043
tr|Q1IHG3|Q1IHG3_ACIBL Tax_Id=204669 SubName: Full=Putative anti...    42   0.074
tr|C2AK83|C2AK83_TSUPA Tax_Id=521096 SubName: Full=Putative unch...    42   0.074
tr|A4J0I7|A4J0I7_DESRM Tax_Id=349161 SubName: Full=Putative tran...    41   0.096
tr|Q13ZH3|Q13ZH3_BURXL Tax_Id=266265 SubName: Full=Predicted tra...    41   0.13 

>tr|B2HKM6|B2HKM6_MYCMM Tax_Id=216594 SubName: Full=Conserved
           membrane protein;[Mycobacterium marinum]
          Length = 237

 Score =  426 bits (1096), Expect = e-118
 Identities = 214/237 (90%), Positives = 214/237 (90%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI
Sbjct: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
           GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH
Sbjct: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNESTAWTIALGVAMVVAAIWP                       DALSGAVTTSRVLT
Sbjct: 121 LLNESTAWTIALGVAMVVAAIWPGAAGGLAGVLMVFVAVLSVYVVVDALSGAVTTSRVLT 180

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA
Sbjct: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237


>tr|A0PWN3|A0PWN3_MYCUA Tax_Id=362242 SubName: Full=Conserved
           membrane protein;[Mycobacterium ulcerans]
          Length = 241

 Score =  412 bits (1060), Expect = e-113
 Identities = 209/241 (86%), Positives = 211/241 (87%), Gaps = 4/241 (1%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVARE LSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI
Sbjct: 1   MDCEVARETLSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
           GAVDL GIRPTPQPRERKRMSWQRWALL VGIAQVAVGIVQGLGFS+GLGHHYVIGSGNH
Sbjct: 61  GAVDLAGIRPTPQPRERKRMSWQRWALLCVGIAQVAVGIVQGLGFSLGLGHHYVIGSGNH 120

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTS---- 176
           LLNESTAWTIALGVAMVVAAIWP                       DALSGAVTTS    
Sbjct: 121 LLNESTAWTIALGVAMVVAAIWPGAAEGLAGVLMVFVAVLSVYVVVDALSGAVTTSRVLT 180

Query: 177 RVLTHLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSA 236
           RVLTHLPVLLGTVLA+MVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSA
Sbjct: 181 RVLTHLPVLLGTVLAVMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSA 240

Query: 237 A 237
           A
Sbjct: 241 A 241


>sp|Q10890|Y093_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           protein Rv0093c/MT0102;[Mycobacterium tuberculosis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|Q7U2V4|Q7U2V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSERVED
           MEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|C6DQV7|C6DQV7_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|C1AJB9|C1AJB9_MYCBT Tax_Id=561275 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium bovis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|A5TYG6|A5TYG6_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|A1KER4|A1KER4_MYCBP Tax_Id=410289 SubName: Full=Probable
           conserved membrane protein;[Mycobacterium bovis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|A5WIE8|A5WIE8_MYCTF Tax_Id=336982 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|A4KNC1|A4KNC1_MYCTU Tax_Id=395095 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|A2VN27|A2VN27_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 282

 Score =  303 bits (775), Expect = 1e-80
 Identities = 153/237 (64%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGER PVPSARVDEHL EC AC  WF QVA QA  L+RL ESRPV+
Sbjct: 47  MDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVV 106

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             V   GIR  P+ R+   M+W+RWALL VGIAQ+A+G VQG G  VGL H +  G+G H
Sbjct: 107 PPVGRLGIRRAPR-RQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTH 165

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LLNEST+W+IALGV MV AA+WP                       DALSGAV+T+R+LT
Sbjct: 166 LLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILT 225

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGHLWPTDGSAA 237
           HLPV++G VLAIMVWRS   PRP PD +A EPDIVLP NASRGRR GHLWPTDGSAA
Sbjct: 226 HLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA 282


>tr|Q9CBG8|Q9CBG8_MYCLE Tax_Id=1769 SubName: Full=Probable integral
           membrane protein;[Mycobacterium leprae]
          Length = 237

 Score =  258 bits (659), Expect = 4e-67
 Identities = 135/237 (56%), Positives = 158/237 (66%), Gaps = 2/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGERE VPS RVDEHL EC AC  WF+QVA QA  L++L++SRP I
Sbjct: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             VD  GI   P+ R R  M+WQRWALL VGIAQ+ +  VQGLG SVGL H   +  G++
Sbjct: 61  TPVDALGIVAPPR-RRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSY 119

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LL+ESTAW+ +LGV M+ A +WP                       D ++GA  T R+L 
Sbjct: 120 LLHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILM 179

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLAD-EPDIVLPQNASRGRRHGHLWPTDGSA 236
           HLPV +G VLAI VWR    PRP  D   D + DIVLP+NASRGRR GHLWPTDGSA
Sbjct: 180 HLPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSA 236


>tr|B8ZSJ3|B8ZSJ3_MYCLB Tax_Id=561304 SubName: Full=Probable
           integral membrane protein;[Mycobacterium leprae]
          Length = 237

 Score =  258 bits (659), Expect = 4e-67
 Identities = 135/237 (56%), Positives = 158/237 (66%), Gaps = 2/237 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDCEVAREALSARLDGERE VPS RVDEHL EC AC  WF+QVA QA  L++L++SRP I
Sbjct: 1   MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI 60

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
             VD  GI   P+ R R  M+WQRWALL VGIAQ+ +  VQGLG SVGL H   +  G++
Sbjct: 61  TPVDALGIVAPPR-RRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSY 119

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           LL+ESTAW+ +LGV M+ A +WP                       D ++GA  T R+L 
Sbjct: 120 LLHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILM 179

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLAD-EPDIVLPQNASRGRRHGHLWPTDGSA 236
           HLPV +G VLAI VWR    PRP  D   D + DIVLP+NASRGRR GHLWPTDGSA
Sbjct: 180 HLPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSA 236


>tr|Q73YY9|Q73YY9_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 459

 Score =  152 bits (383), Expect = 4e-35
 Identities = 94/245 (38%), Positives = 132/245 (53%), Gaps = 9/245 (3%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLI--ESRP 58
           M C+VAREALSARLDGER  V + +VD HL+ C  C  W    A Q  RL  +   E   
Sbjct: 7   MRCDVAREALSARLDGERPQVLAQQVDAHLEACRGCRSWLIGAAVQTRRLASVTPGEGPD 66

Query: 59  VIGAVDLT-GIRPTPQPRERK--RMSWQRWALLFVGIAQVAVGIVQ--GLGFSVGLGHHY 113
           ++  +  + G +PT +P   +  R  ++RW L+ VG+ QVA+   Q  G+ F +  GH +
Sbjct: 67  LVDKIMASIGEQPTGRPAWMRWLRSHYRRWGLIGVGLFQVAIAAAQISGIDFGMVAGHMH 126

Query: 114 VIGSGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAV 173
              SG HL++ESTAW +ALG+AM+ A +WP                       DA  G V
Sbjct: 127 GAMSGEHLMHESTAWLLALGLAMIAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGEV 186

Query: 174 TTSRVLTHLPVLLGTVLAIMVWRSR-GAPRP-APDVLADEPDIVLPQNASRGRRHGHLWP 231
           T +R+ +H+P+LLG   A++V R R G+ RP + D  AD        +A  GRR GHL P
Sbjct: 187 TATRIASHMPLLLGLAFALLVARERVGSRRPGSSDATADAGFAAWAADAPAGRRRGHLRP 246

Query: 232 TDGSA 236
            + +A
Sbjct: 247 INRAA 251


>tr|B1ME37|B1ME37_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 239

 Score =  122 bits (305), Expect = 4e-26
 Identities = 87/249 (34%), Positives = 121/249 (48%), Gaps = 22/249 (8%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M+C+  RE LSA +DGE+  V   R+DEH+  C +C  W     G+A  L R        
Sbjct: 1   MNCQEVREQLSAWVDGEQASVARKRLDEHVLSCASCREWL----GRARGLDRQFAYARSA 56

Query: 61  GAVDLTG-------IRP-TPQPRERK--RMSWQRWALLFVGIAQVAVGIVQGLGFSVGL- 109
              DLTG       + P TP  R     R +  R AL+ +G+ Q+ V  +Q  G   G+ 
Sbjct: 57  PTRDLTGQILAAAAVEPLTPMARYAHWARHNINRCALVLIGLLQLGVAGMQVAGIDFGMV 116

Query: 110 -GHHYVIGSGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDA 168
             HH+   +G HL+NESTAW +ALGVAMV+A + P                       DA
Sbjct: 117 SAHHHGAMTGAHLMNESTAWVVALGVAMVIAGVRPAAAAGMATVLGAFALVLTGYVINDA 176

Query: 169 LSGAVTTSRVLTHLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPDIVLPQNASRGRRHGH 228
           ++  VT +R+++HLPVLLG + A++V R   A R  P    ++   V     + G R  H
Sbjct: 177 VNDQVTLARIISHLPVLLGLIFALLVLRDYRAGRTPP----NQHRAVFLDEVAAGER--H 230

Query: 229 LWPTDGSAA 237
           L   D SAA
Sbjct: 231 LRSADNSAA 239


>tr|A0QFD5|A0QFD5_MYCA1 Tax_Id=243243 RecName: Full=RNA polymerase
           sigma factor;[Mycobacterium avium]
          Length = 401

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 6/176 (3%)

Query: 67  GIRPTPQPRERK--RMSWQRWALLFVGIAQVAVGIVQ--GLGFSVGLGHHYVIGSGNHLL 122
           G +PT +P   +  R  ++RW L+ VG+ QVA+   Q  G+ F +  GH +   SG HL+
Sbjct: 18  GEQPTGRPAWMRWLRSHYRRWGLIGVGLFQVAIAAAQISGIDFGMVAGHMHGAMSGEHLM 77

Query: 123 NESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLTHL 182
           +ESTAW +ALG+AM+ A +WP                       DA  G VT +R+ +H+
Sbjct: 78  HESTAWLLALGLAMIAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGEVTATRIASHM 137

Query: 183 PVLLGTVLAIMVWRSR-GAPRP-APDVLADEPDIVLPQNASRGRRHGHLWPTDGSA 236
           P+LLG   A++V R R G+ RP + D  AD        +A  GRR GHL P + +A
Sbjct: 138 PLLLGLAFALLVARERVGSRRPGSSDATADAGFAAWAADAPAGRRRGHLRPINRAA 193


>tr|C6WL67|C6WL67_ACTMD Tax_Id=446462 SubName: Full=Putative
           integral membrane protein;[Actinosynnema mirum]
          Length = 238

 Score =  106 bits (265), Expect = 2e-21
 Identities = 75/201 (37%), Positives = 92/201 (45%), Gaps = 10/201 (4%)

Query: 3   CEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVIGA 62
           CE  REALSAR+DGE E V  A VD HL  C  C  W      +A  L R +  RP   +
Sbjct: 5   CETCREALSARMDGEVEHVAPAEVDAHLAGCAECARW----QARAQALTRALRVRPAEAS 60

Query: 63  VDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNHLL 122
            DL G      P  R  + WQR  L  V + Q+ +G+ Q LG     GH    GSG HL 
Sbjct: 61  PDLVGAVLADAPPRRVAV-WQRTGLAGVALVQLWLGLAQLLGGGAD-GH---AGSG-HLF 114

Query: 123 NESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLTHL 182
            ES AW +ALGV ++VAA+                         D  +G  T  RV THL
Sbjct: 115 TESAAWNLALGVGLLVAALREARVGALLPALGGFVAVLAAFSAYDLATGVATLERVATHL 174

Query: 183 PVLLGTVLAIMVWRSRGAPRP 203
           P + G VL  +V R+     P
Sbjct: 175 PAVAGLVLLHLVDRAHRDQAP 195


>tr|C6WP38|C6WP38_ACTMD Tax_Id=446462 SubName: Full=Putative
           integral membrane protein;[Actinosynnema mirum]
          Length = 242

 Score =  104 bits (259), Expect = 9e-21
 Identities = 82/242 (33%), Positives = 102/242 (42%), Gaps = 18/242 (7%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           MDC+  REALSARLDGE  P+P A  D HL +C  C  W     G+A  L RL+  R   
Sbjct: 1   MDCDTCREALSARLDGEAAPLPPAWTDAHLAKCPDCARW----RGRAQALTRLVRVREAP 56

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGL----GFSVGLGHHYVIG 116
              DL        P     +   R AL  V +AQ+ + + Q L    G  V  GH    G
Sbjct: 57  AVPDLAAEVLADLPPAHGALR-PRLALAAVALAQLWLALAQLLTGATGHDVTAGHG-AEG 114

Query: 117 SGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTS 176
              HL NE  AW +ALGV ++VAA+                         D   G  T +
Sbjct: 115 LAGHLFNEGAAWNLALGVGLLVAAVNGRRASGLLPTLGGFVVLLLGFSAHDLAEGTATAT 174

Query: 177 RVLTHLPVLLGTVLAIMVWRS-------RGAPRPAPDVLADEPDIVLPQNASRGRRHGHL 229
           RV +HLP+  G VL ++V R+         A RP P         V P  A R     HL
Sbjct: 175 RVASHLPLAAGLVLLLLVARAHRDHPEPESAARPEPRRARTADHDVPPPRADRAPTR-HL 233

Query: 230 WP 231
            P
Sbjct: 234 RP 235


>tr|A4FBJ7|A4FBJ7_SACEN Tax_Id=405948 SubName: Full=Probable
           integral membrane protein;[Saccharopolyspora erythraea]
          Length = 237

 Score =  101 bits (251), Expect = 8e-20
 Identities = 73/213 (34%), Positives = 97/213 (45%), Gaps = 10/213 (4%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M+CE  R ++SARLDGE    P  +VD HL+ C AC  W      +A+ L R +  RP  
Sbjct: 1   MNCESCRISISARLDGEDGTAPDEQVDAHLESCAACRAW----QAKAAMLTRGLRVRPAS 56

Query: 61  GAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNH 120
              DL        PR R R +  R AL  V +AQ+ +G +Q L    GLG H   G   H
Sbjct: 57  PTPDLVDAVLAHAPRRRHR-AVPRVALAVVAVAQLLLGALQML----GLGPHAHHGMSAH 111

Query: 121 LLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLT 180
           L NESTAW +A+G  ++ AA                          D ++G V+  RV +
Sbjct: 112 LFNESTAWNLAVGAGLLWAAARTRAVSGMLPLLSVFLVVLTGFSLHDLMAGVVSVERVAS 171

Query: 181 HLPVLLGTVLAIMVWRSRGAPRPAPDVLADEPD 213
           H  +LLG  L   V R+     P     AD+ D
Sbjct: 172 HGLMLLGLGLLYTVHRTSSGGHPG-GATADDSD 203


>tr|C4RBD6|C4RBD6_9ACTO Tax_Id=219305 SubName: Full=Putative
           uncharacterized protein;[Micromonospora sp. ATCC 39149]
          Length = 276

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 80/268 (29%), Positives = 112/268 (41%), Gaps = 39/268 (14%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQ-RLIESRPV 59
           M CE  RE LSA+LDGE  P      + HL  CG C  WFE  A    R + R++ + P 
Sbjct: 8   MRCEQWREMLSAQLDGEETPAERVTAEGHLVTCGDCRAWFETAAAVTRRARTRVVSAVPD 67

Query: 60  IGAVDLTGI-RPTPQPRERKRMSWQ---RW----------ALLFVGIAQVAVGIVQ-GLG 104
           +    L  +   +P  R R    W+   RW           L  VG  QV +G+VQ G G
Sbjct: 68  LADAVLAAVPAGSPPGRWRSTSRWRSPGRWRERLVAGLRATLGLVGAVQVVLGLVQVGRG 127

Query: 105 FSVGLGHHYVIGSGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXX 164
            +V   H     +G HL +ES AW +A+G   +  A+                       
Sbjct: 128 TTVAHAH----ATGQHLWHESAAWNVAVGAGFLFVALRRFPPAGVLPMLSAFVATLVLLS 183

Query: 165 XXDALSGAVTTSRVLTHLPVLLGTVLAIMVWRSRGAP-RPAP----------DVLADEPD 213
             D ++G V  SR+++H  ++ G VL  ++ R    P  PAP           +  D+P+
Sbjct: 184 VNDLVTGQVAVSRLVSHAILVFGWVLTALLSRPGLRPGGPAPRQGRSPGSRWRIELDQPE 243

Query: 214 -----IVLPQNASRGRRHGHLWPTDGSA 236
                 +LP      R H H  PT GSA
Sbjct: 244 PAAPLRLLPPRPYSARAHAH--PT-GSA 268


>tr|A4X832|A4X832_SALTO Tax_Id=369723 SubName: Full=Putative
           uncharacterized protein;[Salinispora tropica]
          Length = 256

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 74/232 (31%), Positives = 101/232 (43%), Gaps = 20/232 (8%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M CE  RE LSA+LDGE  P   A  D HL  CGAC  WF+Q A   +R  RL  S  VI
Sbjct: 1   MGCEQWREVLSAQLDGEETPAERAAADSHLASCGACRTWFDQAAA-ITRRARL--SVSVI 57

Query: 61  GAVDLT----GIRPTPQPR-ERKRMSW-QRWALL------FVGIAQVAVGIVQGLGFSVG 108
           G  DLT       P   P     R  W QR AL         G  QV +G+ Q +G +  
Sbjct: 58  GP-DLTDAILAAHPATAPTGATMRRPWRQRLALALRAVLGLTGALQVMLGLTQ-VGQAAA 115

Query: 109 LGHHYVIG--SGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXX 166
             H +  G  +  HL +E+ AW IA+G   +  A                          
Sbjct: 116 GPHIHAGGPLASGHLWHEAAAWNIAVGAGFLFVAARRTPPTGLLPMLSAFVGTLVLLSVN 175

Query: 167 DALSGAVTTSRVLTHLPVLLGTVLAIMVWRSRGAP-RPAPDVLADEPDIVLP 217
           D ++G V T+R+++H  + +G  + +++ R    P  P  D+  D P   +P
Sbjct: 176 DVMTGRVETARLVSHGFLFVGYAIVVVMSRPGLHPDGPPADLRTDRPRWRIP 227


>tr|C0U6T8|C0U6T8_9ACTO Tax_Id=526225 SubName: Full=Predicted
           integral membrane protein, COG5660;[Geodermatophilus
           obscurus DSM 43160]
          Length = 215

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 67/221 (30%), Positives = 86/221 (38%), Gaps = 27/221 (12%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M C   REA+SARLDGE   +P+  +D HLD C AC  W    A QA  + R     P  
Sbjct: 1   MQCTPYREAVSARLDGESPGLPAGELDAHLDACPACAAW----ARQAELVTRRARLAPAP 56

Query: 61  GAVDLTGIRPTPQPRE--------RKRMSWQ--RWALLFVGIAQVAV---GIVQGLGFSV 107
              DLT       PRE        R R++    R ALL  G+AQ A+    +V G G   
Sbjct: 57  AVPDLTATVLAALPRELPGTAAAARARLATAALRLALLAAGVAQAALAWPSLVAGTG--- 113

Query: 108 GLGHHYVIGSGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXD 167
                  + +  H+ +ES  W +    A +  A  P                       D
Sbjct: 114 ------AMSAPVHMAHESGVWNLGTAAAFLAVAAAPRLAAGALPFLGTVAVLLAVLTVAD 167

Query: 168 ALSGAVTTSRVLTHLPVLLGTVL-AIMVWRSRGAPRPAPDV 207
             +G V   R   HL +L G  L A + WR R      P V
Sbjct: 168 LRAGHVAADRAAAHLLLLAGVALVATVAWRGRQRRSALPAV 208


>tr|A8M5Q3|A8M5Q3_SALAI Tax_Id=391037 SubName: Full=Putative
           uncharacterized protein;[Salinispora arenicola]
          Length = 256

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 71/232 (30%), Positives = 102/232 (43%), Gaps = 20/232 (8%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M CE  RE LSA+LDGE  P   A  + HL  CG C  WF++ A  A+R  RL  S   +
Sbjct: 1   MGCEQWREVLSAQLDGEDTPGEQAAAESHLTGCGECRAWFDRAAA-ATRRARLSVS---V 56

Query: 61  GAVDLT----GIRPTPQPRE-------RKRMSWQ-RWALLFVGIAQVAVGIVQGLGFSVG 108
              DLT       P+P P E       R+R++   R AL   G  QV +G+ Q +G +  
Sbjct: 57  TGPDLTESVLAALPSPAPVESAARRSGRQRLALALRAALGLTGTLQVLLGLTQ-IGRAAA 115

Query: 109 LGHHYVIG--SGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXX 166
             H +  G  +  HL +E+ AW IA+G   +  A                          
Sbjct: 116 GPHIHAGGPLASGHLWHEAAAWNIAVGAGFLFVAARRTPPTGLVPMLSAFVGTLVLLSVN 175

Query: 167 DALSGAVTTSRVLTHLPVLLGTVLAIMVWRSRGAPRPAPDVL-ADEPDIVLP 217
           D ++G V T+R+++H  +  G  + + + R    P   P  L AD P   +P
Sbjct: 176 DLMTGRVETARLVSHGFLFAGYAIVVAMSRLGLHPDGPPTGLRADRPRWRIP 227


>tr|C4DT69|C4DT69_9ACTO Tax_Id=446470 SubName: Full=Predicted
           integral membrane protein, COG5660;[Stackebrandtia
           nassauensis DSM 44728]
          Length = 208

 Score = 52.0 bits (123), Expect = 5e-05
 Identities = 53/202 (26%), Positives = 79/202 (39%), Gaps = 20/202 (9%)

Query: 1   MDCEVAREALSARLDGEREPVPSAR-VDEHLDECGACGLWFEQVAGQASRLQRLIESRP- 58
           MDC  AR ALSA+LDG  EP+  A  +  HL  C  C  W ++             S P 
Sbjct: 1   MDCTNARAALSAQLDG--EPIAEAEPLRLHLAGCVECRGWKQRAEALTRTASTAFASTPD 58

Query: 59  -VIGAVD-LTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGI---VQGLGFSVGLGHHY 113
             +G ++ ++        R R R    RWA+    +AQ+ + I   +   GFS       
Sbjct: 59  LTVGVLEAVSAADNAANARARARARVLRWAVGIAAVAQLVLAIPALMAATGFS------- 111

Query: 114 VIGSGNHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAV 173
              S  H   E  ++ IA+ V  ++AAI P                       D  SGA 
Sbjct: 112 -DFSAVHASREMASFDIAVAVGFLLAAIRPERARAFVPVACVLALCLAVTSGIDMASGAT 170

Query: 174 TTSRVLTHLPVLLGTVLAIMVW 195
             +    H   ++  V A+++W
Sbjct: 171 ALADETGH---IVAAVQAVLLW 189


>tr|C4LHI0|C4LHI0_CORK4 Tax_Id=645127 SubName: Full=Putative
           membrane protein;[Corynebacterium kroppenstedtii]
          Length = 270

 Score = 50.1 bits (118), Expect = 2e-04
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 1   MDCEVAREALSARLDGEREPV--PSARVDEHLDECGACGLWFEQ--VAGQASRLQRLIES 56
           M+C   R+ALSAR+DGER         +D HL EC  C  W+ Q    G+  R+    +S
Sbjct: 1   MECSEVRQALSARIDGERSRATWDDDVIDAHLAECEDCQNWYTQALTLGRTLRVAPADDS 60

Query: 57  RPVIGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIG 116
             +    +   ++  P+ +   R SW+  +L    IA + +G++  +G+++ L  H    
Sbjct: 61  ESIPDFSEFL-VQSVPEDQLPHRRSWRVISLSLSRIALIVLGLIY-VGWAIYLLSHSTTL 118

Query: 117 SGN 119
           +G+
Sbjct: 119 TGS 121


>tr|Q6NIB0|Q6NIB0_CORDI Tax_Id=1717 SubName: Full=Putative membrane
           protein;[Corynebacterium diphtheriae]
          Length = 220

 Score = 48.9 bits (115), Expect = 5e-04
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           + C   + ALSARLDGE   +    +D HLD C  C  +F+Q       L   I      
Sbjct: 2   LTCSTIQAALSARLDGETPGIDDDVIDTHLDSCPDCQAYFDQAVALNRSLAFRIPEAAYT 61

Query: 61  GAVDL-TGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIV 100
            A DL   I    +P+ RK+ + + W      ++ V  G++
Sbjct: 62  EAPDLIDDILANVEPQWRKQAATRAWNTALSRVSIVVAGLL 102


>tr|C0XQ47|C0XQ47_9CORY Tax_Id=525263 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 208

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 7   REALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVIGAVDLT 66
           R ALSAR+DGE   +  A VD H+ EC  C  +++++   +  L+       +    +L+
Sbjct: 8   RAALSARVDGESSGLDDAVVDAHVAECAECSAYYQRILSLSRNLRFAEIGGGMAPPENLS 67

Query: 67  GIRPTPQPRERKRMSWQRWALL-FVGIAQVAVGIVQGLGFSVGLGHHYVIGSGNHLLN-- 123
            +       E +R+S +R  LL    IA VA  +V            ++  +  HL+N  
Sbjct: 68  TVILAGVEGEWRRLSQRRTVLLTLCRIALVAAALV------------WLAWAVVHLVNGG 115

Query: 124 ESTAWTIALGVAMVVA--AIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVTTSRVLTH 181
           E    ++ LGVA  +A  A  P                       DA+    T S V +H
Sbjct: 116 EPATASVRLGVASALAYTAARPAQIPGIALVVGSMFTFTLGFVVRDAVLD--TGSGVASH 173

Query: 182 LPVLLGTVLAIM-------------VWRSRGA 200
           + +LL T++A++              WRS GA
Sbjct: 174 VLILLPTLVALLGTLAIDRGPQLRRAWRSLGA 205


>tr|Q4JU14|Q4JU14_CORJK Tax_Id=306537 SubName: Full=Putative
          membrane protein;[Corynebacterium jeikeium]
          Length = 260

 Score = 46.2 bits (108), Expect = 0.003
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRL 50
          MDC+  R A+SARLDGE   +    VD HL  C  C  W+  V     R+
Sbjct: 1  MDCQAVRNAMSARLDGETAELSDDLVDAHLAGCEECQRWYATVTALGRRI 50


>tr|B9BER4|B9BER4_9BURK Tax_Id=513051 SubName: Full=Putative
           transmembrane regulator PrtR;[Burkholderia multivorans
           CGD1]
          Length = 299

 Score = 46.2 bits (108), Expect = 0.003
 Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 28/137 (20%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQ--------- 51
           MDC  AR  L A +D E  P  + RV +H+DEC  C    E++   +  ++         
Sbjct: 1   MDCNEARALLDADVDRELSPPDALRVQQHIDECELCRRERERIVALSHAVRAADYHRAPD 60

Query: 52  ----RLIESRPVIGAVDL-----------TGIRPTPQPRERKRMSWQRWALLFVGIAQVA 96
               R+   +P      +            G +  PQPR R+R SW          A  A
Sbjct: 61  ALRARIAALQPEAATATMGDRTGPERARDDGFQAQPQPRGRRRFSWLGGRAASARPAAAA 120

Query: 97  VG----IVQGLGFSVGL 109
            G     + GLG+ V L
Sbjct: 121 SGTRAPALPGLGWGVAL 137


>tr|B1VFH7|B1VFH7_CORU7 Tax_Id=504474 SubName: Full=Putative
          membrane protein;[Corynebacterium urealyticum]
          Length = 271

 Score = 45.8 bits (107), Expect = 0.004
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQ 42
          M+C   R ALSARLDGE   +P   VD H+ +C  C  W+ Q
Sbjct: 1  MECAEVRAALSARLDGEEVALPGDIVDAHVAQCEECQAWYAQ 42


>tr|Q8NRZ8|Q8NRZ8_CORGL Tax_Id=1718 SubName: Full=Hypothetical
           membrane protein;[Corynebacterium glutamicum]
          Length = 238

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRP-V 59
           +DC   + ALSA+LDGE   +  A ++ HL  C  C  ++ + A + +R+     + P  
Sbjct: 17  VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNR-AAELNRMLNFCAAEPRT 75

Query: 60  IGAVDLTGIRPTPQPRERKRMS--------WQRWALLFVGIAQVAVGIVQ-GLGFSVGLG 110
           +   DL+ I       E +R +          R  L+ +G+  +A GI   G   S+ + 
Sbjct: 76  LTPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQ 135

Query: 111 HHYVIGSGNHLLNESTAWTIALGVAMVVAAIWP 143
              +    + LL E+ A+ IAL V ++ AA  P
Sbjct: 136 EDPLT---SRLLAEAVAYRIALSVGLLFAAWKP 165


>tr|Q8FR05|Q8FR05_COREF Tax_Id=152794 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium efficiens]
          Length = 229

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 6/201 (2%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQ-RLIESRPV 59
           +DC   + ALSARLDGE   +  A +D HL  C AC  ++++ A     L    +E R +
Sbjct: 8   VDCHGIQAALSARLDGEPTGIDDAVIDTHLAHCEACRTFYDRAAALNRTLSLSAVEPRTM 67

Query: 60  IGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGN 119
           +       I    +P+ R+R + +  A   + +  V + +V  +     LG    I   +
Sbjct: 68  VPPDLSEIILAEVEPQWRRRANTRVIANTVLRLVLVVLAVVYTVWAGTMLGDTASISIQD 127

Query: 120 -----HLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVT 174
                 L  E+  + + L V +  AA  P                       D L     
Sbjct: 128 DPLTARLAAEAATFRLGLAVGLFFAAWKPSIITGMLPIFGALWTFSLGFAARDLLVDTAD 187

Query: 175 TSRVLTHLPVLLGTVLAIMVW 195
           ++   T + +L+  V+  + W
Sbjct: 188 STTATTIVLLLVSAVVLGLTW 208


>tr|A4QCN0|A4QCN0_CORGB Tax_Id=340322 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium glutamicum]
          Length = 223

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRP-V 59
           +DC   + ALSA+LDGE   +  A ++ HL  C  C  ++ + A + +R+     + P  
Sbjct: 2   VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNR-AAELNRMLNFCAAEPRT 60

Query: 60  IGAVDLTGIRPTPQPRERKRMS--------WQRWALLFVGIAQVAVGIVQ-GLGFSVGLG 110
           +   DL+ I       E +R +          R  L+ +G+  +A GI   G   S+ + 
Sbjct: 61  LTPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQ 120

Query: 111 HHYVIGSGNHLLNESTAWTIALGVAMVVAAIWP 143
              +    + LL E+ A+ IAL V ++ AA  P
Sbjct: 121 EDPLT---SRLLAEAVAYRIALSVGLLFAAWKP 150


>tr|Q6M6Q7|Q6M6Q7_CORGL Tax_Id=1718 SubName: Full=Putative membrane
           protein;[Corynebacterium glutamicum]
          Length = 223

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRP-V 59
           +DC   + ALSA+LDGE   +  A ++ HL  C  C  ++ + A + +R+     + P  
Sbjct: 2   VDCSAIQAALSAKLDGEPTGLDDAVIEAHLANCEECRNYYNR-AAELNRMLNFCAAEPRT 60

Query: 60  IGAVDLTGIRPTPQPRERKRMS--------WQRWALLFVGIAQVAVGIVQ-GLGFSVGLG 110
           +   DL+ I       E +R +          R  L+ +G+  +A GI   G   S+ + 
Sbjct: 61  LTPPDLSEIILAEVEPEWRRHANAKVVGSLLSRVLLVILGVVYLAWGITMLGDSASISVQ 120

Query: 111 HHYVIGSGNHLLNESTAWTIALGVAMVVAAIWP 143
              +    + LL E+ A+ IAL V ++ AA  P
Sbjct: 121 EDPLT---SRLLAEAVAYRIALSVGLLFAAWKP 150


>tr|C8NND9|C8NND9_COREF Tax_Id=196164 SubName: Full=Membrane
           protein;[Corynebacterium efficiens YS-314]
          Length = 228

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 6/201 (2%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQ-RLIESRPV 59
           +DC   + ALSARLDGE   +  A +D HL  C AC  ++++ A     L    +E R +
Sbjct: 7   VDCHGIQAALSARLDGEPTGIDDAVIDTHLAHCEACRTFYDRAAALNRTLSLSAVEPRTM 66

Query: 60  IGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGSGN 119
           +       I    +P+ R+R + +  A   + +  V + +V  +     LG    I   +
Sbjct: 67  VPPDLSEIILAEVEPQWRRRANTRVIANTVLRLVLVVLAVVYTVWAGTMLGDTASISIQD 126

Query: 120 -----HLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVT 174
                 L  E+  + + L V +  AA  P                       D L     
Sbjct: 127 DPLTARLAAEAATFRLGLAVGLFFAAWKPSIITGMLPIFGALWTFSLGFAARDLLVDTAD 186

Query: 175 TSRVLTHLPVLLGTVLAIMVW 195
           ++   T + +L+  V+  + W
Sbjct: 187 STTATTIVLLLVSAVVLGLTW 207


>tr|C0VT06|C0VT06_9CORY Tax_Id=548477 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 223

 Score = 45.4 bits (106), Expect = 0.005
 Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 7/203 (3%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           + C+  + A+SA+LD E+  V    ++ HL+ C  C  + E      + L    +  P +
Sbjct: 2   ISCQEIQRAISAKLDNEKADVDDTIIEAHLEGCADCRAYLENARLLKAELSVTDDDAPDL 61

Query: 61  GAVDLTGIRPTPQPRERKR---MSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGS 117
             + L G+ P  +  E +R   ++  R  L+ +GIA + +  +  L  S  L    +I  
Sbjct: 62  TDLILAGVGPEVRRAESRRATSLAIARTLLVLLGIAYI-IWAIATLVESTHLVTEGIISE 120

Query: 118 G---NHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVT 174
               + ++    A  +ALG  ++ A+                          D + G ++
Sbjct: 121 DPLVSGMMVNLAAARVALGFGLLFASWKTEVATGMLPIFATLWTFSFGFAARDLIVGTLS 180

Query: 175 TSRVLTHLPVLLGTVLAIMVWRS 197
              ++  L +L  T++ +  W S
Sbjct: 181 NGNIVGLLLLLAATLVLVWTWLS 203


>tr|C8RQL9|C8RQL9_CORJE Tax_Id=525262 SubName: Full=Membrane
          protein;[Corynebacterium jeikeium ATCC 43734]
          Length = 260

 Score = 45.1 bits (105), Expect = 0.007
 Identities = 20/50 (40%), Positives = 26/50 (52%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRL 50
          MDC+  R ++SARLDGE   +    VD HL  C  C  W+  V     R+
Sbjct: 1  MDCQAVRTSMSARLDGETAELSDDLVDAHLAACEDCQRWYSTVTALGRRM 50


>tr|C0E7V1|C0E7V1_9CORY Tax_Id=566549 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium matruchotii
           ATCC 33806]
          Length = 219

 Score = 44.7 bits (104), Expect = 0.009
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRL---QRLIESR 57
           ++C+  + ALSARLDGE  P+P   VD H+ EC  C  + +  A     L      +   
Sbjct: 6   VECQQVQAALSARLDGEPSPLPDDVVDAHVAECAECQSFLDNAALLNRTLAFSDTSVSDI 65

Query: 58  PVIGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGS 117
           P +    + G+ P  + R   R+     +     +  V +G+V   G++V L     + +
Sbjct: 66  PDLSEEIMAGVAPVWRRRAASRLV----SAAICRVVLVLLGVV-WCGWAVAL---LRLPA 117

Query: 118 GNH------LLNESTAWTIALGVAMVVAA 140
           G++      L+ E+ A   ALG  +V  A
Sbjct: 118 GDNDPVFLQLVMETVAMRSALGFGVVFVA 146


>tr|C5VBK4|C5VBK4_9CORY Tax_Id=553207 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium matruchotii
          ATCC 14266]
          Length = 219

 Score = 44.3 bits (103), Expect = 0.011
 Identities = 19/44 (43%), Positives = 27/44 (61%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVA 44
          ++C+  + ALSARLDGE  P+P   VD H+ EC  C  + +  A
Sbjct: 6  VECQQVQAALSARLDGEPSPLPDDVVDAHVAECAECQSFLDNAA 49


>tr|C2GIL5|C2GIL5_9CORY Tax_Id=548478 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 223

 Score = 43.9 bits (102), Expect = 0.015
 Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 7/203 (3%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           + C+  + A+SA+LD E+  +    ++ HL+ C  C  + E      + L    +  P +
Sbjct: 2   ISCQEIQRAISAKLDNEKADIDDTIIEAHLEGCADCRAYLENARLLKAELSVTDDDAPDL 61

Query: 61  GAVDLTGIRPTPQPRERKR---MSWQRWALLFVGIAQVAVGIVQGLGFSVGLGHHYVIGS 117
             + L G+ P  +  E +R   ++  R  L+ +GIA + +  +  L  S  L    +   
Sbjct: 62  TDLILAGVGPEVRRAESRRATSLAIARTLLVLLGIAYI-IWAIATLVESTHLVTEGIFSE 120

Query: 118 G---NHLLNESTAWTIALGVAMVVAAIWPXXXXXXXXXXXXXXXXXXXXXXXDALSGAVT 174
               + ++    A  +ALG  ++ A+                          D + G ++
Sbjct: 121 DPLVSDMMVNLAAARVALGFGLLFASWKTEVATGMLPIFATLWTFSFGFAARDLIVGTLS 180

Query: 175 TSRVLTHLPVLLGTVLAIMVWRS 197
              ++  L +L  T++ +  W S
Sbjct: 181 NGNIVGLLLLLAATLVLVWTWLS 203


>tr|A9AJW0|A9AJW0_BURM1 Tax_Id=395019 SubName: Full=Anti-sigma
           factor; SubName: Full=Putative transmembrane anti-sigma
           factor;[Burkholderia multivorans]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.019
 Identities = 41/143 (28%), Positives = 53/143 (37%), Gaps = 34/143 (23%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQA------------- 47
           MDC  AR  L A +D E  P  + RV +H+DEC  C    E++   +             
Sbjct: 1   MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPD 60

Query: 48  ---SRLQRLIESRPVIGAVDLTGIR--------------PTPQPRERKRMSWQRWALLFV 90
              +R+  L     V  A    G R              P PQPR R+R SW        
Sbjct: 61  ALRARIAALQPEGEVRAATAPMGDRTGPERTRDGGFGAPPQPQPRGRRRFSWLGGRGASA 120

Query: 91  GIAQVAVG----IVQGLGFSVGL 109
             A  A G     + GLG+ V L
Sbjct: 121 RPAAAASGTRAPALPGLGWGVAL 143


>tr|C8NW09|C8NW09_9CORY Tax_Id=585529 SubName: Full=Membrane
           protein;[Corynebacterium genitalium ATCC 33030]
          Length = 218

 Score = 43.5 bits (101), Expect = 0.019
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 7   REALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVIGAVDLT 66
           ++ALSAR+DGE   + +A +D HL  C  C  ++E+     S L  +     ++   DL+
Sbjct: 8   QKALSARIDGEDPGLDNAVLDAHLAGCPECLAFWERSLRLTSSLSLVEADGAMVPPTDLS 67

Query: 67  GIRPTPQPRERKRMSWQRWALLFVG-IAQVAVGIVQGLGFSVGLGHHYVIGSGNHLLNES 125
            +       E +R+S +R   L VG I  V +G+V    F  G    YV+ S   + ++S
Sbjct: 68  DVIFAGVEGEFRRVSSRRVVALAVGRILLVVLGVVH--AFWAG---DYVL-SATAVTDDS 121

Query: 126 TAWTIALGVAMVVAAI 141
           +   + +G+A V   I
Sbjct: 122 STAQLLIGMAAVHVGI 137


>tr|B9C722|B9C722_9BURK Tax_Id=513053 SubName: Full=Putative
           transmembrane regulator PrtR;[Burkholderia multivorans
           CGD2M]
          Length = 301

 Score = 43.1 bits (100), Expect = 0.025
 Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 30/139 (21%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQA------------S 48
           MDC  AR  L A +D E  P  + RV +H+DEC  C    E++   +             
Sbjct: 1   MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPD 60

Query: 49  RLQRLIESRPVIGAVDLTGIR--------------PTPQPRERKRMSWQRWALLFVGIAQ 94
            L+  I +     A   TG R              P PQPR R+  SW+         A 
Sbjct: 61  ALRARIAALQPEAATAPTGERTGAERARDGEFQAPPQPQPRGRRPFSWRGGRGASARPAA 120

Query: 95  VAVG----IVQGLGFSVGL 109
            A G     + GLG+ V L
Sbjct: 121 AASGTRAPALPGLGWGVAL 139


>tr|B9BYC5|B9BYC5_9BURK Tax_Id=513052 SubName: Full=Putative
           transmembrane regulator PrtR;[Burkholderia multivorans
           CGD2]
          Length = 301

 Score = 43.1 bits (100), Expect = 0.025
 Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 30/139 (21%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQA------------S 48
           MDC  AR  L A +D E  P  + RV +H+DEC  C    E++   +             
Sbjct: 1   MDCNEARALLDADVDRELSPPDALRVQQHVDECELCRRERERIVALSHAVRAADYHRAPD 60

Query: 49  RLQRLIESRPVIGAVDLTGIR--------------PTPQPRERKRMSWQRWALLFVGIAQ 94
            L+  I +     A   TG R              P PQPR R+  SW+         A 
Sbjct: 61  ALRARIAALQPEAATAPTGERTGAERARDGEFQAPPQPQPRGRRPFSWRGGRGASARPAA 120

Query: 95  VAVG----IVQGLGFSVGL 109
            A G     + GLG+ V L
Sbjct: 121 AASGTRAPALPGLGWGVAL 139


>tr|B5RYT2|B5RYT2_RALSO Tax_Id=305 SubName: Full=Cog5662, predicted
           transmembrane transcriptional regulator (Anti-sigma
           factor) protein;[Ralstonia solanacearum]
          Length = 276

 Score = 42.4 bits (98), Expect = 0.043
 Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 33/131 (25%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGAC---------------------GLW 39
           M C+  R  L+AR DGE     S R++ HL  C AC                      L+
Sbjct: 2   MICDDVRALLTARADGELGAADSLRIESHLATCAACAAMAARHDRVARALRQGLRAPALY 61

Query: 40  FEQVAGQASRLQRLIESRPVIGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGI 99
                G A R+ + +++  +  AV      P  + R   R  W+R      G+A +    
Sbjct: 62  AAAPQGLAGRILQAVQAEAMQSAV------PAARRRVPPRSGWRR------GLAWLMTPA 109

Query: 100 VQGLGFSVGLG 110
           V G  F +GLG
Sbjct: 110 VPGRMFGLGLG 120


>tr|A3RT07|A3RT07_RALSO Tax_Id=342110 SubName: Full=Putative
           uncharacterized protein;[Ralstonia solanacearum UW551]
          Length = 276

 Score = 42.4 bits (98), Expect = 0.043
 Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 33/131 (25%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGAC---------------------GLW 39
           M C+  R  L+AR DGE     S R++ HL  C AC                      L+
Sbjct: 2   MICDDVRALLTARADGELGAADSLRIESHLATCAACAAMAARHDRVARALRQGLRAPALY 61

Query: 40  FEQVAGQASRLQRLIESRPVIGAVDLTGIRPTPQPRERKRMSWQRWALLFVGIAQVAVGI 99
                G A R+ + +++  +  AV      P  + R   R  W+R      G+A +    
Sbjct: 62  AAAPQGLAGRILQAVQAEAMQSAV------PAARRRVPPRSGWRR------GLAWLMTPA 109

Query: 100 VQGLGFSVGLG 110
           V G  F +GLG
Sbjct: 110 VPGRMFGLGLG 120


>tr|Q1IHG3|Q1IHG3_ACIBL Tax_Id=204669 SubName: Full=Putative
           anti-sigma factor;[Acidobacteria bacterium]
          Length = 264

 Score = 41.6 bits (96), Expect = 0.074
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 22/113 (19%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
           M CE AR  +    D E +   +  V+ HL+ C AC    EQ+  QA  L  ++ S  V 
Sbjct: 3   MQCEDARPLIELYADRELDVSRAVEVERHLETCSACA---EQLK-QAKSLASVVRSSGVY 58

Query: 61  GA-------------VDLTGIRPTPQ---PRERKRMSWQRWALLFVGIAQVAV 97
           G              ++  G+R  P+   P +R+R++W  W  L + +A V +
Sbjct: 59  GTMPASLNARVHSAILEEAGVREQPRLITPPKRERVAW--WRPLGIAVAAVLI 109


>tr|C2AK83|C2AK83_TSUPA Tax_Id=521096 SubName: Full=Putative
          uncharacterized protein;[Tsukamurella paurometabola DSM
          20162]
          Length = 99

 Score = 41.6 bits (96), Expect = 0.074
 Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRPVI 60
          M C   R ALSA LDGE +    A +  HL  C AC +W E    +  R+ R +  R V 
Sbjct: 1  MHCARWRGALSAELDGELDAAERAGLVRHLGACPACAVWLE----ENRRIGRRLALRSVE 56

Query: 61 GAVDL 65
           A DL
Sbjct: 57 PAEDL 61


>tr|A4J0I7|A4J0I7_DESRM Tax_Id=349161 SubName: Full=Putative
          transmembrane anti-sigma factor;[Desulfotomaculum
          reducens]
          Length = 363

 Score = 41.2 bits (95), Expect = 0.096
 Identities = 22/58 (37%), Positives = 29/58 (50%)

Query: 1  MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRLQRLIESRP 58
          M+C+V  E LS  LDG  +PV  A V +HL  C AC     ++      LQ L +  P
Sbjct: 1  MNCQVVLELLSPYLDGVLDPVEHATVQKHLASCPACSRELAELKACIDLLQELPDIAP 58


>tr|Q13ZH3|Q13ZH3_BURXL Tax_Id=266265 SubName: Full=Predicted
           transmembrane Transcriptional regulator (Anti-sigma
           factor);[Burkholderia xenovorans]
          Length = 320

 Score = 40.8 bits (94), Expect = 0.13
 Identities = 43/164 (26%), Positives = 56/164 (34%), Gaps = 36/164 (21%)

Query: 1   MDCEVAREALSARLDGEREPVPSARVDEHLDECGACGLWFEQVAGQASRL---------- 50
           MDC  AR  L A  D E     + RV +H++ C AC    E +   +  L          
Sbjct: 1   MDCNEARPLLDANADHELPAPDARRVQQHIESCAACRRESENLRALSGALRAAPYHRAPQ 60

Query: 51  ---QRLIESRPVIGAVDLTGIRP----------TPQPRERKRMSW-QRWALLFVGIAQVA 96
              +R++   P +         P          TP  RER R  W  RW L      Q  
Sbjct: 61  SLRERIVAGLPSVDEPAAAAEAPVERVSGVTSVTPPQRERARRGWLDRW-LDGWRAPQGG 119

Query: 97  VGIVQGLGFSVGLGHHYVIGSGNHLLNESTAWTIALGVAMVVAA 140
            G   G G  VG G  +  G           W + L VA+   A
Sbjct: 120 FGWPTGAGGPVGSGGVFARG-----------WLVVLVVALCAVA 152


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.136    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,683,663,096
Number of extensions: 65006334
Number of successful extensions: 184361
Number of sequences better than 10.0: 130
Number of HSP's gapped: 185180
Number of HSP's successfully gapped: 130
Length of query: 237
Length of database: 3,846,993,858
Length adjustment: 133
Effective length of query: 104
Effective length of database: 2,347,391,859
Effective search space: 244128753336
Effective search space used: 244128753336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)