BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_0289
         (87 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|A0PWM1|RS182_MYCUA Tax_Id=362242 (rpsR2)RecName: Full=30S rib...   129   1e-28
sp|B2HKQ1|RS182_MYCMM Tax_Id=216594 (rpsR2)RecName: Full=30S rib...   129   1e-28
sp|P66465|RS182_MYCTU Tax_Id=1773 (rpsR2)RecName: Full=30S ribos...   103   6e-21
sp|A5U480|RS182_MYCTA Tax_Id=419947 (rpsR2)RecName: Full=30S rib...   103   6e-21
sp|A1KKA1|RS182_MYCBP Tax_Id=410289 (rpsR2)RecName: Full=30S rib...   103   6e-21
sp|P66466|RS182_MYCBO Tax_Id=1765 (rpsR2)RecName: Full=30S ribos...   103   6e-21
tr|C6DQ11|C6DQ11_MYCTK Tax_Id=478434 SubName: Full=30S ribosomal...   103   6e-21
tr|C1APX5|C1APX5_MYCBT Tax_Id=561275 (rpsR2)SubName: Full=30S ri...   103   6e-21
tr|A5WP34|A5WP34_MYCTF Tax_Id=336982 SubName: Full=30S ribosomal...   103   6e-21
tr|A4KIJ5|A4KIJ5_MYCTU Tax_Id=395095 SubName: Full=30S ribosomal...   103   6e-21
tr|A2VJG3|A2VJG3_MYCTU Tax_Id=348776 SubName: Full=30S ribosomal...   103   6e-21
sp|Q73TF1|RS182_MYCPA Tax_Id=1770 (rpsR2)RecName: Full=30S ribos...   101   2e-20
sp|A1TGG1|RS181_MYCVP Tax_Id=350058 (rpsR1)RecName: Full=30S rib...   100   5e-20
sp|A4F7R8|RS181_SACEN Tax_Id=405948 (rpsR1)RecName: Full=30S rib...    97   4e-19
tr|B1MFN0|B1MFN0_MYCA9 Tax_Id=561007 (rpsR.2)SubName: Full=30S r...    96   1e-18
tr|C6WJD5|C6WJD5_ACTMD Tax_Id=446462 SubName: Full=Ribosomal pro...    95   3e-18
sp|A0R549|RS181_MYCS2 Tax_Id=246196 (rpsR1)RecName: Full=30S rib...    94   4e-18
tr|C1A3C9|C1A3C9_RHOE4 Tax_Id=234621 (rpsR)SubName: Full=30S rib...    94   5e-18
tr|C3JXA7|C3JXA7_RHOER Tax_Id=596309 (rpsR)SubName: Full=Ribosom...    94   5e-18
sp|C4LHF0|RS18_CORK4 Tax_Id=645127 (rpsR)RecName: Full=30S ribos...    94   6e-18
tr|C2CM39|C2CM39_CORST Tax_Id=525268 (rpsR)SubName: Full=30S rib...    93   8e-18
sp|A4T5Z8|RS182_MYCGI Tax_Id=350054 (rpsR2)RecName: Full=30S rib...    93   1e-17
sp|Q5YPR1|RS182_NOCFA Tax_Id=37329 (rpsR2)RecName: Full=30S ribo...    92   1e-17
tr|C6AFT6|C6AFT6_BIFAS Tax_Id=555970 SubName: Full=30S ribosomal...    92   1e-17
tr|C6A9P5|C6A9P5_BIFLB Tax_Id=580050 SubName: Full=30S ribosomal...    92   1e-17
tr|B8DSK4|B8DSK4_BIFA0 Tax_Id=442563 (rpsR)SubName: Full=Ribosom...    92   1e-17
tr|B2EC25|B2EC25_BIFAN Tax_Id=486409 SubName: Full=30S ribosomal...    92   1e-17
tr|C2GIJ7|C2GIJ7_9CORY Tax_Id=548478 (rpsR)SubName: Full=30S rib...    92   2e-17
tr|C0VSY8|C0VSY8_9CORY Tax_Id=548477 (rpsR)SubName: Full=30S rib...    92   2e-17
tr|C3PF12|C3PF12_CORA7 Tax_Id=548476 (rpsR)SubName: Full=30S rib...    92   2e-17
sp|Q6NIC9|RS18_CORDI Tax_Id=1717 (rpsR)RecName: Full=30S ribosom...    91   3e-17
tr|C9NJ17|C9NJ17_9ACTO Tax_Id=591167 SubName: Full=Ribosomal pro...    91   3e-17
tr|C5VBM4|C5VBM4_9CORY Tax_Id=553207 (rpsR)SubName: Full=Ribosom...    91   3e-17
tr|C0E7X4|C0E7X4_9CORY Tax_Id=566549 SubName: Full=Putative unch...    91   3e-17
sp|A4XDG6|RS18_SALTO Tax_Id=369723 (rpsR)RecName: Full=30S ribos...    91   4e-17
sp|A8LXG1|RS18_SALAI Tax_Id=391037 (rpsR)RecName: Full=30S ribos...    91   4e-17
sp|A1A3H9|RS18_BIFAA Tax_Id=367928 (rpsR)RecName: Full=30S ribos...    91   4e-17
tr|C4RHI8|C4RHI8_9ACTO Tax_Id=219305 SubName: Full=30S ribosomal...    91   4e-17
tr|C4FDE7|C4FDE7_9BIFI Tax_Id=518635 SubName: Full=Putative unch...    91   4e-17
tr|A7A793|A7A793_BIFAD Tax_Id=411481 SubName: Full=Putative unch...    91   4e-17
sp|P66455|RS18_CORGL Tax_Id=1718 (rpsR)RecName: Full=30S ribosom...    90   7e-17
sp|A4QCK8|RS18_CORGB Tax_Id=340322 (rpsR)RecName: Full=30S ribos...    90   7e-17
sp|P66456|RS18_COREF Tax_Id=152794 (rpsR)RecName: Full=30S ribos...    90   7e-17
sp|Q8G758|RS18_BIFLO Tax_Id=216816 (rpsR)RecName: Full=30S ribos...    90   7e-17
sp|Q0S4Z2|RS182_RHOSR Tax_Id=101510 (rpsR2)RecName: Full=30S rib...    90   7e-17
tr|B7GTS4|B7GTS4_BIFLI Tax_Id=391904 SubName: Full=Ribosomal pro...    90   7e-17
tr|B3DU43|B3DU43_BIFLD Tax_Id=205913 (rpsR)SubName: Full=Ribosom...    90   7e-17
tr|D0L6I6|D0L6I6_GORB4 Tax_Id=526226 SubName: Full=Ribosomal pro...    90   7e-17
tr|C8NNG1|C8NNG1_COREF Tax_Id=196164 (rpsR)SubName: Full=30S rib...    90   7e-17
tr|B1SA21|B1SA21_9BIFI Tax_Id=473819 SubName: Full=Putative unch...    90   7e-17

>sp|A0PWM1|RS182_MYCUA Tax_Id=362242 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium ulcerans]
          Length = 87

 Score =  129 bits (323), Expect = 1e-28
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY
Sbjct: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81

Query: 82 PASRPQ 87
          PASRPQ
Sbjct: 82 PASRPQ 87


>sp|B2HKQ1|RS182_MYCMM Tax_Id=216594 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium marinum]
          Length = 87

 Score =  129 bits (323), Expect = 1e-28
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY
Sbjct: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81

Query: 82 PASRPQ 87
          PASRPQ
Sbjct: 82 PASRPQ 87


>sp|P66465|RS182_MYCTU Tax_Id=1773 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium tuberculosis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>sp|A5U480|RS182_MYCTA Tax_Id=419947 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium tuberculosis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>sp|A1KKA1|RS182_MYCBP Tax_Id=410289 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium bovis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>sp|P66466|RS182_MYCBO Tax_Id=1765 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium bovis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>tr|C6DQ11|C6DQ11_MYCTK Tax_Id=478434 SubName: Full=30S ribosomal
          protein S18 rpsR2;[Mycobacterium tuberculosis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>tr|C1APX5|C1APX5_MYCBT Tax_Id=561275 (rpsR2)SubName: Full=30S
          ribosomal protein S18;[Mycobacterium bovis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>tr|A5WP34|A5WP34_MYCTF Tax_Id=336982 SubName: Full=30S ribosomal
          protein S18 rpsR2;[Mycobacterium tuberculosis]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>tr|A4KIJ5|A4KIJ5_MYCTU Tax_Id=395095 SubName: Full=30S ribosomal
          protein S18 rpsR2;[Mycobacterium tuberculosis str.
          Haarlem]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>tr|A2VJG3|A2VJG3_MYCTU Tax_Id=348776 SubName: Full=30S ribosomal
          protein S18 rpsR2;[Mycobacterium tuberculosis C]
          Length = 88

 Score =  103 bits (257), Expect = 6e-21
 Identities = 53/66 (80%), Positives = 55/66 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLGV  VDYKD + LR FISDRGKIRSR VTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 16 NLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75

Query: 82 PASRPQ 87
          P    Q
Sbjct: 76 PGQDRQ 81


>sp|Q73TF1|RS182_MYCPA Tax_Id=1770 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium
          paratuberculosis]
          Length = 88

 Score =  101 bits (252), Expect = 2e-20
 Identities = 50/61 (81%), Positives = 56/61 (91%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLLDSLG+  VDYKD + LR FIS+RGKIRSR+VTGL+VQQQRQ+ATAIKNAREMALLPY
Sbjct: 22 NLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQQQRQVATAIKNAREMALLPY 81

Query: 82 P 82
          P
Sbjct: 82 P 82


>sp|A1TGG1|RS181_MYCVP Tax_Id=350058 (rpsR1)RecName: Full=30S
          ribosomal protein S18 1;[Mycobacterium vanbaalenii]
          Length = 83

 Score =  100 bits (249), Expect = 5e-20
 Identities = 49/65 (75%), Positives = 53/65 (81%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLL SLG+  VDYKD S LR FIS+RGKIRSR VTGLTVQQQRQ+ TA+K AREMALLPY
Sbjct: 16 NLLKSLGIERVDYKDTSTLRQFISERGKIRSRSVTGLTVQQQRQVTTAVKTAREMALLPY 75

Query: 82 PASRP 86
          P   P
Sbjct: 76 PGQNP 80


>sp|A4F7R8|RS181_SACEN Tax_Id=405948 (rpsR1)RecName: Full=30S
          ribosomal protein S18 1;[Saccharopolyspora erythraea]
          Length = 81

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 48/63 (76%), Positives = 55/63 (87%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLL   GV +VD+KD   LR FISDRGKIRSRRVTGLT+Q+QR++ATAIKNAREMALLPY
Sbjct: 16 NLLQRAGVVQVDWKDTDLLRRFISDRGKIRSRRVTGLTMQEQREVATAIKNAREMALLPY 75

Query: 82 PAS 84
          PA+
Sbjct: 76 PAA 78


>tr|B1MFN0|B1MFN0_MYCA9 Tax_Id=561007 (rpsR.2)SubName: Full=30S
          ribosomal protein S18.2;[Mycobacterium abscessus]
          Length = 82

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 48/60 (80%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NL   LGVS VDYKD + LR F+S+RGKIRSRRVTGLTVQQQRQ+A AIKNAREMALLPY
Sbjct: 22 NLFAKLGVSSVDYKDTNTLRMFLSERGKIRSRRVTGLTVQQQRQVANAIKNAREMALLPY 81


>tr|C6WJD5|C6WJD5_ACTMD Tax_Id=446462 SubName: Full=Ribosomal
          protein S18;[Actinosynnema mirum]
          Length = 77

 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 48/62 (77%), Positives = 53/62 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          NLL   GV  VD+KD + LR F+SDRGKIRSRRVTGLT QQQRQ+ATA+KNAREMALLPY
Sbjct: 13 NLLRREGVELVDWKDAALLRKFLSDRGKIRSRRVTGLTPQQQRQVATAVKNAREMALLPY 72

Query: 82 PA 83
          PA
Sbjct: 73 PA 74


>sp|A0R549|RS181_MYCS2 Tax_Id=246196 (rpsR1)RecName: Full=30S
          ribosomal protein S18 1;[Mycobacterium smegmatis]
          Length = 85

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L++LGV+ +DYKD++ LRTF+S+RGKIRSR VTGLT QQQRQ+ATAIKNAREMALLP 
Sbjct: 22 NQLEALGVTTIDYKDVAVLRTFLSERGKIRSRHVTGLTPQQQRQVATAIKNAREMALLPM 81

Query: 82 PASR 85
             R
Sbjct: 82 AGPR 85


>tr|C1A3C9|C1A3C9_RHOE4 Tax_Id=234621 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Rhodococcus erythropolis]
          Length = 85

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 47/64 (73%), Positives = 55/64 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++ VDYKDI+ LRTFISDRGKIRSRRVTGLT QQQRQ+A A+KNAREMALLP+
Sbjct: 22 NPLFAAKITHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPF 81

Query: 82 PASR 85
           A+R
Sbjct: 82 TAAR 85


>tr|C3JXA7|C3JXA7_RHOER Tax_Id=596309 (rpsR)SubName:
          Full=Ribosomal protein S18;[Rhodococcus erythropolis
          SK121]
          Length = 85

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 47/64 (73%), Positives = 55/64 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++ VDYKDI+ LRTFISDRGKIRSRRVTGLT QQQRQ+A A+KNAREMALLP+
Sbjct: 22 NPLFAAKITHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPF 81

Query: 82 PASR 85
           A+R
Sbjct: 82 TAAR 85


>sp|C4LHF0|RS18_CORK4 Tax_Id=645127 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Corynebacterium kroppenstedtii]
          Length = 82

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 46/60 (76%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+  VDYKDI  LRTFIS+RGKIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKARGIEAVDYKDIETLRTFISERGKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 79


>tr|C2CM39|C2CM39_CORST Tax_Id=525268 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Corynebacterium striatum ATCC
          6940]
          Length = 84

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+  VDYKD+  LR FISDRGKIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 22 NPLKAEGIETVDYKDVKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 81

Query: 82 PA 83
           A
Sbjct: 82 TA 83


>sp|A4T5Z8|RS182_MYCGI Tax_Id=350054 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Mycobacterium gilvum]
          Length = 79

 Score = 92.8 bits (229), Expect = 1e-17
 Identities = 44/61 (72%), Positives = 50/61 (81%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N+   LG+  VDYKD S LR F+S+RGKIRSR VTGLTVQQQRQ+  A+KNAREMALLPY
Sbjct: 16 NMFAQLGIERVDYKDTSTLRQFLSERGKIRSRTVTGLTVQQQRQVTIAVKNAREMALLPY 75

Query: 82 P 82
          P
Sbjct: 76 P 76


>sp|Q5YPR1|RS182_NOCFA Tax_Id=37329 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Nocardia farcinica]
          Length = 84

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+  VDYKD++ LRTFISDRGKIRSRRVTGLT QQQRQ+A A+KNAREMALLP+
Sbjct: 22 NPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPF 81


>tr|C6AFT6|C6AFT6_BIFAS Tax_Id=555970 SubName: Full=30S ribosomal
          protein S18;[Bifidobacterium animalis subsp. lactis]
          Length = 82

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 44/60 (73%), Positives = 54/60 (90%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+IATAIKNAREMALLPY
Sbjct: 18 NPLKAAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPY 77


>tr|C6A9P5|C6A9P5_BIFLB Tax_Id=580050 SubName: Full=30S ribosomal
          protein S18;[Bifidobacterium animalis subsp. lactis]
          Length = 82

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 44/60 (73%), Positives = 54/60 (90%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+IATAIKNAREMALLPY
Sbjct: 18 NPLKAAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPY 77


>tr|B8DSK4|B8DSK4_BIFA0 Tax_Id=442563 (rpsR)SubName:
          Full=Ribosomal protein S18;[Bifidobacterium animalis
          subsp. lactis]
          Length = 82

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 44/60 (73%), Positives = 54/60 (90%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+IATAIKNAREMALLPY
Sbjct: 18 NPLKAAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPY 77


>tr|B2EC25|B2EC25_BIFAN Tax_Id=486409 SubName: Full=30S ribosomal
          protein S18;[Bifidobacterium animalis subsp. lactis
          HN019]
          Length = 82

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 44/60 (73%), Positives = 54/60 (90%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+IATAIKNAREMALLPY
Sbjct: 18 NPLKAAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPY 77


>tr|C2GIJ7|C2GIJ7_9CORY Tax_Id=548478 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Corynebacterium glucuronolyticum
          ATCC 51866]
          Length = 82

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKD++ LR FISDRGKIRSRRVTGLT +QQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKAAGIEKVDYKDLNTLRQFISDRGKIRSRRVTGLTPRQQRQVATAVKNAREMALLPF 79


>tr|C0VSY8|C0VSY8_9CORY Tax_Id=548477 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Corynebacterium glucuronolyticum
          ATCC 51867]
          Length = 82

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKD++ LR FISDRGKIRSRRVTGLT +QQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKAAGIEKVDYKDLNTLRQFISDRGKIRSRRVTGLTPRQQRQVATAVKNAREMALLPF 79


>tr|C3PF12|C3PF12_CORA7 Tax_Id=548476 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Corynebacterium aurimucosum]
          Length = 84

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYK+I  LR FISDRGKIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 22 NPLKAEGIEKVDYKEIKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 81


>sp|Q6NIC9|RS18_CORDI Tax_Id=1717 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Corynebacterium diphtheriae]
          Length = 82

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 79


>tr|C9NJ17|C9NJ17_9ACTO Tax_Id=591167 SubName: Full=Ribosomal
          protein S18;[Streptomyces flavogriseus ATCC 33331]
          Length = 77

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 52/62 (83%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N LD+ G++ VDYKD   LR F+SDRGKIRSRRVT +T +QQRQ+ATA+KNAREMALLPY
Sbjct: 14 NPLDTAGITYVDYKDTDLLRKFVSDRGKIRSRRVTRITARQQRQVATAVKNAREMALLPY 73

Query: 82 PA 83
           A
Sbjct: 74 SA 75


>tr|C5VBM4|C5VBM4_9CORY Tax_Id=553207 (rpsR)SubName:
          Full=Ribosomal protein S18;[Corynebacterium matruchotii
          ATCC 14266]
          Length = 82

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 79


>tr|C0E7X4|C0E7X4_9CORY Tax_Id=566549 SubName: Full=Putative
          uncharacterized protein;[Corynebacterium matruchotii
          ATCC 33806]
          Length = 82

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQRQ+ATA+KNAREMALLP+
Sbjct: 20 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNAREMALLPF 79


>sp|A4XDG6|RS18_SALTO Tax_Id=369723 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Salinispora tropica]
          Length = 93

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 45/63 (71%), Positives = 53/63 (84%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N LD  G++ +DYKD + LR FISDRGKIR+RRVTG+T QQQRQIA A+KNAREMALLPY
Sbjct: 29 NPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMALLPY 88

Query: 82 PAS 84
           A+
Sbjct: 89 TAT 91


>sp|A8LXG1|RS18_SALAI Tax_Id=391037 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Salinispora arenicola]
          Length = 79

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 45/63 (71%), Positives = 53/63 (84%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N LD  G++ +DYKD + LR FISDRGKIR+RRVTG+T QQQRQIA A+KNAREMALLPY
Sbjct: 15 NPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMALLPY 74

Query: 82 PAS 84
           A+
Sbjct: 75 TAT 77


>sp|A1A3H9|RS18_BIFAA Tax_Id=367928 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Bifidobacterium adolescentis]
          Length = 82

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 44/63 (69%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+I+ AIKNAREMALLPY
Sbjct: 18 NPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>tr|C4RHI8|C4RHI8_9ACTO Tax_Id=219305 SubName: Full=30S ribosomal
          protein S18;[Micromonospora sp. ATCC 39149]
          Length = 79

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 45/63 (71%), Positives = 53/63 (84%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N LD  G++ +DYKD + LR FISDRGKIR+RRVTG+T QQQRQIA A+KNAREMALLPY
Sbjct: 15 NPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMALLPY 74

Query: 82 PAS 84
           A+
Sbjct: 75 TAT 77


>tr|C4FDE7|C4FDE7_9BIFI Tax_Id=518635 SubName: Full=Putative
          uncharacterized protein;[Bifidobacterium angulatum DSM
          20098]
          Length = 82

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 44/63 (69%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+I+ AIKNAREMALLPY
Sbjct: 18 NPLKTAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>tr|A7A793|A7A793_BIFAD Tax_Id=411481 SubName: Full=Putative
          uncharacterized protein;[Bifidobacterium adolescentis
          L2-32]
          Length = 82

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 44/63 (69%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+I+ AIKNAREMALLPY
Sbjct: 18 NPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>sp|P66455|RS18_CORGL Tax_Id=1718 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Corynebacterium glutamicum]
          Length = 83

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 44/60 (73%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQR++ATA+KNAREMALLP+
Sbjct: 21 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQREVATAVKNAREMALLPF 80


>sp|A4QCK8|RS18_CORGB Tax_Id=340322 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Corynebacterium glutamicum]
          Length = 83

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 44/60 (73%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQR++ATA+KNAREMALLP+
Sbjct: 21 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQREVATAVKNAREMALLPF 80


>sp|P66456|RS18_COREF Tax_Id=152794 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Corynebacterium efficiens]
          Length = 83

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 44/60 (73%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQR++ATA+KNAREMALLP+
Sbjct: 21 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQREVATAVKNAREMALLPF 80


>sp|Q8G758|RS18_BIFLO Tax_Id=216816 (rpsR)RecName: Full=30S
          ribosomal protein S18;[Bifidobacterium longum]
          Length = 82

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+++ AIKNAREMALLPY
Sbjct: 18 NPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>sp|Q0S4Z2|RS182_RHOSR Tax_Id=101510 (rpsR2)RecName: Full=30S
          ribosomal protein S18 2;[Rhodococcus sp.]
          Length = 84

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 45/60 (75%), Positives = 51/60 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  +  VDYKDI+ LRTFISDRGKIRSRRVTGLT QQQRQ+A A+KNAREMALLP+
Sbjct: 22 NPLFAAKIEHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPF 81


>tr|B7GTS4|B7GTS4_BIFLI Tax_Id=391904 SubName: Full=Ribosomal
          protein S18;[Bifidobacterium longum subsp. infantis]
          Length = 82

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+++ AIKNAREMALLPY
Sbjct: 18 NPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>tr|B3DU43|B3DU43_BIFLD Tax_Id=205913 (rpsR)SubName:
          Full=Ribosomal protein S18;[Bifidobacterium longum]
          Length = 82

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  V+E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+++ AIKNAREMALLPY
Sbjct: 18 NPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


>tr|D0L6I6|D0L6I6_GORB4 Tax_Id=526226 SubName: Full=Ribosomal
          protein S18;[Gordonia bronchialis]
          Length = 84

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 28 GVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          G S VDYKDI+ LRTF+SDRGKIRSR VTGLT QQQRQ+ATAI+NAREMALLPY
Sbjct: 28 GRSPVDYKDIALLRTFLSDRGKIRSRSVTGLTPQQQRQVATAIRNAREMALLPY 81


>tr|C8NNG1|C8NNG1_COREF Tax_Id=196164 (rpsR)SubName: Full=30S
          ribosomal protein S18;[Corynebacterium efficiens
          YS-314]
          Length = 83

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 44/60 (73%), Positives = 52/60 (86%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L + G+ +VDYKDI+ LR FISDR KIRSRRVTGLT QQQR++ATA+KNAREMALLP+
Sbjct: 21 NPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQREVATAVKNAREMALLPF 80


>tr|B1SA21|B1SA21_9BIFI Tax_Id=473819 SubName: Full=Putative
          uncharacterized protein;[Bifidobacterium dentium ATCC
          27678]
          Length = 82

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 43/63 (68%), Positives = 54/63 (85%)

Query: 22 NLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
          N L +  ++E+DYKD++ LR FISDRGKIRSRR+TG+TVQ+QR+I+ AIKNAREMALLPY
Sbjct: 18 NPLKAAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKISKAIKNAREMALLPY 77

Query: 82 PAS 84
            S
Sbjct: 78 ATS 80


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.320    0.133    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 387,588,947
Number of extensions: 9701336
Number of successful extensions: 28904
Number of sequences better than 10.0: 2319
Number of HSP's gapped: 28994
Number of HSP's successfully gapped: 2319
Length of query: 87
Length of database: 3,846,993,858
Length adjustment: 57
Effective length of query: 30
Effective length of database: 3,204,307,287
Effective search space: 96129218610
Effective search space used: 96129218610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)