BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0292 (78 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HKQ4|B2HKQ4_MYCMM Tax_Id=216594 (rpmB2)SubName: Full=50S ri... 132 1e-29 tr|A0PWL8|A0PWL8_MYCUA Tax_Id=362242 (rpmB2)SubName: Full=50S ri... 132 1e-29 tr|A0QM59|A0QM59_MYCA1 Tax_Id=243243 (rpmB)SubName: Full=Ribosom... 114 3e-24 sp|P66148|RL28B_MYCTU Tax_Id=1773 (rpmB2)RecName: Full=50S ribos... 109 9e-23 sp|P66149|RL28B_MYCBO Tax_Id=1765 (rpmB2)RecName: Full=50S ribos... 109 9e-23 tr|C6DQ08|C6DQ08_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal... 109 9e-23 tr|C1APX8|C1APX8_MYCBT Tax_Id=561275 (rpmB2)SubName: Full=50S ri... 109 9e-23 tr|A5U483|A5U483_MYCTA Tax_Id=419947 (rpmB2)SubName: Full=50S ri... 109 9e-23 tr|A1TGF8|A1TGF8_MYCVP Tax_Id=350058 SubName: Full=LSU ribosomal... 109 9e-23 tr|A1KKA4|A1KKA4_MYCBP Tax_Id=410289 (rpmB2)SubName: Full=Riboso... 109 9e-23 tr|A5WP37|A5WP37_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal... 109 9e-23 tr|A4KIJ8|A4KIJ8_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal... 109 9e-23 tr|A2VJG6|A2VJG6_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal... 109 9e-23 tr|B1MFN3|B1MFN3_MYCA9 Tax_Id=561007 (rpmB.2)SubName: Full=50S r... 106 7e-22 tr|A0R552|A0R552_MYCS2 Tax_Id=246196 (rpmB)SubName: Full=Ribosom... 106 1e-21 tr|Q1B2P9|Q1B2P9_MYCSS Tax_Id=164756 SubName: Full=LSU ribosomal... 102 2e-20 tr|A3Q6V3|A3Q6V3_MYCSJ Tax_Id=164757 SubName: Full=LSU ribosomal... 102 2e-20 tr|A1UME9|A1UME9_MYCSK Tax_Id=189918 SubName: Full=LSU ribosomal... 102 2e-20 sp|Q5YPR4|RL282_NOCFA Tax_Id=37329 (rpmB2)RecName: Full=50S ribo... 100 4e-20 tr|A4T5Z3|A4T5Z3_MYCGI Tax_Id=350054 SubName: Full=LSU ribosomal... 100 7e-20 tr|C1AX05|C1AX05_RHOOB Tax_Id=632772 (rpmB)SubName: Full=50S rib... 95 2e-18 tr|Q0S4Y9|Q0S4Y9_RHOSR Tax_Id=101510 (rpmB1)SubName: Full=50S ri... 94 4e-18 tr|C1A3C6|C1A3C6_RHOE4 Tax_Id=234621 (rpmB)SubName: Full=50S rib... 94 6e-18 tr|C3JXB0|C3JXB0_RHOER Tax_Id=596309 (rpmB)SubName: Full=Ribosom... 94 6e-18 sp|Q4JTZ9|RL28_CORJK Tax_Id=306537 (rpmB)RecName: Full=50S ribos... 92 2e-17 sp|P0A5V6|RL28A_MYCTU Tax_Id=1773 (rpmB1)RecName: Full=50S ribos... 92 2e-17 sp|P0A5V7|RL28A_MYCBO Tax_Id=1765 (rpmB1)RecName: Full=50S ribos... 92 2e-17 tr|C6DQW9|C6DQW9_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal... 92 2e-17 tr|C1AJD1|C1AJD1_MYCBT Tax_Id=561275 (rpmB1)SubName: Full=50S ri... 92 2e-17 tr|A5TYH9|A5TYH9_MYCTA Tax_Id=419947 (rpmB1)SubName: Full=Riboso... 92 2e-17 tr|A1KES6|A1KES6_MYCBP Tax_Id=410289 (rpmB1)SubName: Full=Probab... 92 2e-17 tr|C8RQN3|C8RQN3_CORJE Tax_Id=525262 (rpmB)SubName: Full=50S rib... 92 2e-17 tr|C0XQ69|C0XQ69_9CORY Tax_Id=525263 (rpmB)SubName: Full=50S rib... 92 2e-17 tr|A5WIG0|A5WIG0_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal... 92 2e-17 tr|A4KND3|A4KND3_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal... 92 2e-17 tr|A2VN36|A2VN36_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal... 92 2e-17 tr|C2GIK0|C2GIK0_9CORY Tax_Id=548478 (rpmB)SubName: Full=50S rib... 91 3e-17 tr|C0VSZ1|C0VSZ1_9CORY Tax_Id=548477 (rpmB)SubName: Full=50S rib... 91 3e-17 sp|Q8NS15|RL28_CORGL Tax_Id=1718 (rpmB)RecName: Full=50S ribosom... 91 4e-17 sp|A4QCL1|RL28_CORGB Tax_Id=340322 (rpmB)RecName: Full=50S ribos... 91 4e-17 tr|C2CM36|C2CM36_CORST Tax_Id=525268 (rpmB)SubName: Full=50S rib... 90 7e-17 tr|C6R9G2|C6R9G2_9CORY Tax_Id=553206 (rpmB)SubName: Full=Ribosom... 89 2e-16 tr|C2BQ32|C2BQ32_9CORY Tax_Id=525264 (rpmB)SubName: Full=50S rib... 89 2e-16 tr|C0WF33|C0WF33_9CORY Tax_Id=525260 (rpmB)SubName: Full=50S rib... 89 2e-16 sp|C3PF15|RL28_CORA7 Tax_Id=548476 (rpmB)RecName: Full=50S ribos... 89 2e-16 sp|C4LHF3|RL28_CORK4 Tax_Id=645127 (rpmB)RecName: Full=50S ribos... 88 4e-16 sp|Q6NIC6|RL28_CORDI Tax_Id=1717 (rpmB)RecName: Full=50S ribosom... 88 4e-16 tr|D0L6I9|D0L6I9_GORB4 Tax_Id=526226 SubName: Full=Ribosomal pro... 88 4e-16 tr|C5VBM1|C5VBM1_9CORY Tax_Id=553207 SubName: Full=Ribosomal pro... 87 6e-16 sp|Q8FR24|RL28_COREF Tax_Id=152794 (rpmB)RecName: Full=50S ribos... 87 8e-16 >tr|B2HKQ4|B2HKQ4_MYCMM Tax_Id=216594 (rpmB2)SubName: Full=50S ribosomal protein L28 RpmB2;[Mycobacterium marinum] Length = 78 Score = 132 bits (333), Expect = 1e-29 Identities = 68/78 (87%), Positives = 68/78 (87%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQVTGRTVSFGNTV WSPNIQLKTYYLPSENRRIKLRVSAKGIKVID Sbjct: 1 MSARCQVTGRTVSFGNTVSHSHRRSRRRWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEATVARLRRAGEQI Sbjct: 61 RDGIEATVARLRRAGEQI 78 >tr|A0PWL8|A0PWL8_MYCUA Tax_Id=362242 (rpmB2)SubName: Full=50S ribosomal protein L28 RpmB2;[Mycobacterium ulcerans] Length = 78 Score = 132 bits (333), Expect = 1e-29 Identities = 68/78 (87%), Positives = 68/78 (87%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQVTGRTVSFGNTV WSPNIQLKTYYLPSENRRIKLRVSAKGIKVID Sbjct: 1 MSARCQVTGRTVSFGNTVSHSHRRSRRRWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEATVARLRRAGEQI Sbjct: 61 RDGIEATVARLRRAGEQI 78 >tr|A0QM59|A0QM59_MYCA1 Tax_Id=243243 (rpmB)SubName: Full=Ribosomal protein L28;[Mycobacterium avium] Length = 78 Score = 114 bits (286), Expect = 3e-24 Identities = 59/78 (75%), Positives = 61/78 (78%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFGN V WSPNIQLKTYYLPSE RRI+LRVSAKGIKVID Sbjct: 1 MSADCQVTGRRPSFGNAVSHSHRRTPRRWSPNIQLKTYYLPSEGRRIRLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G+QI Sbjct: 61 RDGIEAVVARLRRHGQQI 78 >sp|P66148|RL28B_MYCTU Tax_Id=1773 (rpmB2)RecName: Full=50S ribosomal protein L28-2;[Mycobacterium tuberculosis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >sp|P66149|RL28B_MYCBO Tax_Id=1765 (rpmB2)RecName: Full=50S ribosomal protein L28-2;[Mycobacterium bovis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|C6DQ08|C6DQ08_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal protein L28 rpmB2;[Mycobacterium tuberculosis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|C1APX8|C1APX8_MYCBT Tax_Id=561275 (rpmB2)SubName: Full=50S ribosomal protein L28;[Mycobacterium bovis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|A5U483|A5U483_MYCTA Tax_Id=419947 (rpmB2)SubName: Full=50S ribosomal protein L28;[Mycobacterium tuberculosis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|A1TGF8|A1TGF8_MYCVP Tax_Id=350058 SubName: Full=LSU ribosomal protein L28P;[Mycobacterium vanbaalenii] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 54/78 (69%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGN V W+PNIQ KTYYLPSE RR+KLRVSAKGIKVID Sbjct: 1 MSAHCQVTGRAPGFGNAVSHSHRRTRRRWNPNIQTKTYYLPSEGRRVKLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VARLRR G++I Sbjct: 61 RDGIESVVARLRREGQKI 78 >tr|A1KKA4|A1KKA4_MYCBP Tax_Id=410289 (rpmB2)SubName: Full=Ribosomal protein L28;[Mycobacterium bovis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|A5WP37|A5WP37_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal protein L28 rpmB2;[Mycobacterium tuberculosis] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|A4KIJ8|A4KIJ8_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal protein L28 rpmB2;[Mycobacterium tuberculosis str. Haarlem] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|A2VJG6|A2VJG6_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal protein L28 rpmB2;[Mycobacterium tuberculosis C] Length = 78 Score = 109 bits (273), Expect = 9e-23 Identities = 55/78 (70%), Positives = 59/78 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGNTV WSPNIQ +TYYLPSE RRI+LRVS KGIKVID Sbjct: 1 MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLRR G++I Sbjct: 61 RDGIEAVVARLRRQGQRI 78 >tr|B1MFN3|B1MFN3_MYCA9 Tax_Id=561007 (rpmB.2)SubName: Full=50S ribosomal protein L28-2;[Mycobacterium abscessus] Length = 82 Score = 106 bits (265), Expect = 7e-22 Identities = 53/77 (68%), Positives = 58/77 (75%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 +SA C+VTGR+ FGN V WSPNIQLKTYYLPSE+RRIKLRVS KGIKVID Sbjct: 5 LSAHCEVTGRSPGFGNAVSHSHRRTRRRWSPNIQLKTYYLPSEDRRIKLRVSTKGIKVID 64 Query: 61 RDGIEATVARLRRAGEQ 77 RDGIEA VARLR G + Sbjct: 65 RDGIEAVVARLRAQGRK 81 >tr|A0R552|A0R552_MYCS2 Tax_Id=246196 (rpmB)SubName: Full=Ribosomal protein L28;[Mycobacterium smegmatis] Length = 78 Score = 106 bits (264), Expect = 1e-21 Identities = 53/78 (67%), Positives = 58/78 (74%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGN+V W PNIQ KTYYLPSE RRI+LRVSAKGIKVID Sbjct: 1 MSAHCQVTGRGPGFGNSVSHSHRRTPRRWDPNIQNKTYYLPSEGRRIRLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VAR+R GE++ Sbjct: 61 RDGIEAVVARMRARGEKV 78 >tr|Q1B2P9|Q1B2P9_MYCSS Tax_Id=164756 SubName: Full=LSU ribosomal protein L28P;[Mycobacterium sp.] Length = 78 Score = 102 bits (253), Expect = 2e-20 Identities = 50/78 (64%), Positives = 57/78 (73%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR+ FGN V W PNIQ KTYY+PSE RR+ LRVSAKGIKVID Sbjct: 1 MSAHCQVTGRSPGFGNRVSHSHRRTRRRWRPNIQTKTYYVPSEGRRVTLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGI+A +AR+RR G +I Sbjct: 61 RDGIDAVLARIRRQGGKI 78 >tr|A3Q6V3|A3Q6V3_MYCSJ Tax_Id=164757 SubName: Full=LSU ribosomal protein L28P;[Mycobacterium sp.] Length = 78 Score = 102 bits (253), Expect = 2e-20 Identities = 50/78 (64%), Positives = 57/78 (73%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR+ FGN V W PNIQ KTYY+PSE RR+ LRVSAKGIKVID Sbjct: 1 MSAHCQVTGRSPGFGNRVSHSHRRTRRRWRPNIQTKTYYVPSEGRRVTLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGI+A +AR+RR G +I Sbjct: 61 RDGIDAVLARIRRQGGKI 78 >tr|A1UME9|A1UME9_MYCSK Tax_Id=189918 SubName: Full=LSU ribosomal protein L28P;[Mycobacterium sp.] Length = 78 Score = 102 bits (253), Expect = 2e-20 Identities = 50/78 (64%), Positives = 57/78 (73%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR+ FGN V W PNIQ KTYY+PSE RR+ LRVSAKGIKVID Sbjct: 1 MSAHCQVTGRSPGFGNRVSHSHRRTRRRWRPNIQTKTYYVPSEGRRVTLRVSAKGIKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGI+A +AR+RR G +I Sbjct: 61 RDGIDAVLARIRRQGGKI 78 >sp|Q5YPR4|RL282_NOCFA Tax_Id=37329 (rpmB2)RecName: Full=50S ribosomal protein L28 2;[Nocardia farcinica] Length = 78 Score = 100 bits (250), Expect = 4e-20 Identities = 52/78 (66%), Positives = 54/78 (69%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W PNIQ KTYYLPSE RRI L VSAKGIK ID Sbjct: 1 MSAHCQVTGRKPGFGKSVSHSHVRTNRRWDPNIQRKTYYLPSEGRRITLTVSAKGIKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VARLR GE+I Sbjct: 61 RDGIEAVVARLRARGEKI 78 >tr|A4T5Z3|A4T5Z3_MYCGI Tax_Id=350054 SubName: Full=LSU ribosomal protein L28P;[Mycobacterium gilvum] Length = 78 Score = 100 bits (248), Expect = 7e-20 Identities = 50/73 (68%), Positives = 52/73 (71%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FGN V W PNIQ KTYYLPSE RRI LRVS KGIK+ID Sbjct: 1 MSAHCQVTGRKPGFGNAVSHSHRRTRRRWDPNIQRKTYYLPSEGRRITLRVSTKGIKIID 60 Query: 61 RDGIEATVARLRR 73 RDGIE+ VARLRR Sbjct: 61 RDGIESVVARLRR 73 >tr|C1AX05|C1AX05_RHOOB Tax_Id=632772 (rpmB)SubName: Full=50S ribosomal protein L28;[Rhodococcus opacus] Length = 78 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/78 (60%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W PNIQ KTY LPSE RRI L +SAKGIK +D Sbjct: 1 MSAHCQVTGRKPGFGKSVSHSHKRTNRRWDPNIQKKTYLLPSEGRRITLTLSAKGIKTVD 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VAR+R GE++ Sbjct: 61 RDGIEAVVARIRARGEKV 78 >tr|Q0S4Y9|Q0S4Y9_RHOSR Tax_Id=101510 (rpmB1)SubName: Full=50S ribosomal protein L28;[Rhodococcus sp.] Length = 78 Score = 94.4 bits (233), Expect = 4e-18 Identities = 47/78 (60%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W PNIQ KTY+LPSE RR+ L +SAKGIK ID Sbjct: 1 MSAHCQVTGRQPGFGKSVSHSHKRTNRRWDPNIQKKTYFLPSEGRRVTLTLSAKGIKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VAR+R G +I Sbjct: 61 RDGIEAVVARIRARGGKI 78 >tr|C1A3C6|C1A3C6_RHOE4 Tax_Id=234621 (rpmB)SubName: Full=50S ribosomal protein L28;[Rhodococcus erythropolis] Length = 78 Score = 93.6 bits (231), Expect = 6e-18 Identities = 46/78 (58%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W+PNIQ KTY LPSE RRI L +S KGIK ID Sbjct: 1 MSAHCQVTGRVPGFGKSVSHSHKRSNRRWNPNIQRKTYVLPSEGRRITLTLSTKGIKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VAR+R GE++ Sbjct: 61 RDGIESVVARIRARGEKV 78 >tr|C3JXB0|C3JXB0_RHOER Tax_Id=596309 (rpmB)SubName: Full=Ribosomal protein L28;[Rhodococcus erythropolis SK121] Length = 78 Score = 93.6 bits (231), Expect = 6e-18 Identities = 46/78 (58%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W+PNIQ KTY LPSE RRI L +S KGIK ID Sbjct: 1 MSAHCQVTGRVPGFGKSVSHSHKRSNRRWNPNIQRKTYLLPSEGRRITLTLSTKGIKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VAR+R GE++ Sbjct: 61 RDGIESVVARIRARGEKV 78 >sp|Q4JTZ9|RL28_CORJK Tax_Id=306537 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium jeikeium] Length = 78 Score = 92.0 bits (227), Expect = 2e-17 Identities = 45/78 (57%), Positives = 54/78 (69%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PNIQ +T+YLPSE R I L VS KG+K ID Sbjct: 1 MSAYCQVTGRKPSFGKSVSHSHRRTNRRWNPNIQRRTFYLPSEGRSITLNVSTKGLKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >sp|P0A5V6|RL28A_MYCTU Tax_Id=1773 (rpmB1)RecName: Full=50S ribosomal protein L28-1;[Mycobacterium tuberculosis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >sp|P0A5V7|RL28A_MYCBO Tax_Id=1765 (rpmB1)RecName: Full=50S ribosomal protein L28-1;[Mycobacterium bovis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|C6DQW9|C6DQW9_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal protein rpmB1;[Mycobacterium tuberculosis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|C1AJD1|C1AJD1_MYCBT Tax_Id=561275 (rpmB1)SubName: Full=50S ribosomal protein L28;[Mycobacterium bovis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|A5TYH9|A5TYH9_MYCTA Tax_Id=419947 (rpmB1)SubName: Full=Ribosomal protein L28;[Mycobacterium tuberculosis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|A1KES6|A1KES6_MYCBP Tax_Id=410289 (rpmB1)SubName: Full=Probable 50s ribosomal protein L28-1 rpmB1;[Mycobacterium bovis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|C8RQN3|C8RQN3_CORJE Tax_Id=525262 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium jeikeium ATCC 43734] Length = 78 Score = 92.0 bits (227), Expect = 2e-17 Identities = 45/78 (57%), Positives = 54/78 (69%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PNIQ +T+YLPSE R I L VS KG+K ID Sbjct: 1 MSAYCQVTGRKPSFGKSVSHSHRRTNRRWNPNIQRRTFYLPSEGRSITLNVSTKGLKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >tr|C0XQ69|C0XQ69_9CORY Tax_Id=525263 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium lipophiloflavum DSM 44291] Length = 78 Score = 92.0 bits (227), Expect = 2e-17 Identities = 45/78 (57%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG TV W+PN+Q K +YLPSE R I L VS KG+K+ID Sbjct: 1 MSAYCQVTGRQPSFGKTVSHSHRRHSRRWNPNVQKKRFYLPSEGRTITLNVSTKGLKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA +R GE+I Sbjct: 61 RDGIESVVASIRARGEKI 78 >tr|A5WIG0|A5WIG0_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal protein L28-1 rpmB1;[Mycobacterium tuberculosis] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|A4KND3|A4KND3_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal protein L28-1 rpmB1;[Mycobacterium tuberculosis str. Haarlem] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|A2VN36|A2VN36_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal protein L28-1 rpmB1;[Mycobacterium tuberculosis C] Length = 94 Score = 92.0 bits (227), Expect = 2e-17 Identities = 48/75 (64%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQ+TGRTV FG V W PNIQLK YYLPSE+RRIK+RVSA+GIKVID Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVID 60 Query: 61 RDGIEATVARLRRAG 75 RDG R RAG Sbjct: 61 RDGHRGR-RRAARAG 74 >tr|C2GIK0|C2GIK0_9CORY Tax_Id=548478 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium glucuronolyticum ATCC 51866] Length = 78 Score = 91.3 bits (225), Expect = 3e-17 Identities = 45/78 (57%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W+PNIQ + +YLPSE R I L VS KG+KVID Sbjct: 1 MSAICQVTGRKPGFGKSVSHSHRRTNRRWNPNIQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VAR+R GE++ Sbjct: 61 RDGIEAVVARIRARGERV 78 >tr|C0VSZ1|C0VSZ1_9CORY Tax_Id=548477 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium glucuronolyticum ATCC 51867] Length = 78 Score = 91.3 bits (225), Expect = 3e-17 Identities = 45/78 (57%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG +V W+PNIQ + +YLPSE R I L VS KG+KVID Sbjct: 1 MSAICQVTGRKPGFGKSVSHSHRRTNRRWNPNIQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VAR+R GE++ Sbjct: 61 RDGIEAVVARIRARGERV 78 >sp|Q8NS15|RL28_CORGL Tax_Id=1718 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium glutamicum] Length = 78 Score = 90.9 bits (224), Expect = 4e-17 Identities = 44/78 (56%), Positives = 54/78 (69%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PN+Q + +Y+PSE R I L VS KG+KVID Sbjct: 1 MSAHCQVTGRKPSFGKSVSHSHRRTSRRWNPNVQRRKFYVPSEGRTITLTVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VA++R GE+I Sbjct: 61 RDGIEAVVAQIRARGEKI 78 >sp|A4QCL1|RL28_CORGB Tax_Id=340322 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium glutamicum] Length = 78 Score = 90.9 bits (224), Expect = 4e-17 Identities = 44/78 (56%), Positives = 54/78 (69%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PN+Q + +Y+PSE R I L VS KG+KVID Sbjct: 1 MSAHCQVTGRKPSFGKSVSHSHRRTSRRWNPNVQRRKFYVPSEGRTITLTVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VA++R GE+I Sbjct: 61 RDGIEAVVAQIRARGEKI 78 >tr|C2CM36|C2CM36_CORST Tax_Id=525268 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium striatum ATCC 6940] Length = 78 Score = 90.1 bits (222), Expect = 7e-17 Identities = 44/78 (56%), Positives = 52/78 (66%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG V W+PN+Q + YYLPSE R I L VS KGIK+ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGIKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >tr|C6R9G2|C6R9G2_9CORY Tax_Id=553206 (rpmB)SubName: Full=Ribosomal protein L28;[Corynebacterium tuberculostearicum SK141] Length = 78 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/78 (55%), Positives = 52/78 (66%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG V W+PN+Q + YYLPSE R I L VS KG+K+ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGMKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >tr|C2BQ32|C2BQ32_9CORY Tax_Id=525264 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium pseudogenitalium ATCC 33035] Length = 78 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/78 (55%), Positives = 52/78 (66%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG V W+PN+Q + YYLPSE R I L VS KG+K+ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGMKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >tr|C0WF33|C0WF33_9CORY Tax_Id=525260 (rpmB)SubName: Full=50S ribosomal protein L28;[Corynebacterium accolens ATCC 49725] Length = 78 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/78 (55%), Positives = 52/78 (66%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG V W+PN+Q + YYLPSE R I L VS KG+K+ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLNVSTKGMKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >sp|C3PF15|RL28_CORA7 Tax_Id=548476 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium aurimucosum] Length = 78 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/78 (55%), Positives = 52/78 (66%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR FG V W+PN+Q + YYLPSE R I L VS KG+K+ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >sp|C4LHF3|RL28_CORK4 Tax_Id=645127 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium kroppenstedtii] Length = 78 Score = 87.8 bits (216), Expect = 4e-16 Identities = 44/78 (56%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PNIQ +++YLPSE R I L VS KG+K ID Sbjct: 1 MSAYCQVTGRKPSFGKSVSHSHRRTNRRWNPNIQRRSFYLPSEGRTITLNVSTKGLKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 R GIE+ VA+LR GE+I Sbjct: 61 RYGIESVVAKLRARGEKI 78 >sp|Q6NIC6|RL28_CORDI Tax_Id=1717 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium diphtheriae] Length = 78 Score = 87.8 bits (216), Expect = 4e-16 Identities = 42/78 (53%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR +G +V W+PN+Q + +YLPSE R I L VS KG+KVID Sbjct: 1 MSAICQVTGRQPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGRTITLNVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE+I Sbjct: 61 RDGIESVVAKIRARGEKI 78 >tr|D0L6I9|D0L6I9_GORB4 Tax_Id=526226 SubName: Full=Ribosomal protein L28;[Gordonia bronchialis] Length = 78 Score = 87.8 bits (216), Expect = 4e-16 Identities = 42/78 (53%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSARCQVTG T FGN V W+PNIQ + +Y+P+E+R I L VSAKG+K ID Sbjct: 1 MSARCQVTGATPGFGNRVSHSHRKTRRRWNPNIQRRRFYIPAEDRHITLNVSAKGLKTID 60 Query: 61 RDGIEATVARLRRAGEQI 78 R GIE+ +A +R GE+I Sbjct: 61 RHGIESVLATIRARGEKI 78 >tr|C5VBM1|C5VBM1_9CORY Tax_Id=553207 SubName: Full=Ribosomal protein L28;[Corynebacterium matruchotii ATCC 14266] Length = 111 Score = 87.0 bits (214), Expect = 6e-16 Identities = 41/78 (52%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR +G +V W+PN+Q + +YLPSE R I L VS KG+KVID Sbjct: 34 MSAICQVTGRKPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGRTITLTVSTKGLKVID 93 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIE+ VA++R GE++ Sbjct: 94 RDGIESVVAKIRARGEKV 111 >sp|Q8FR24|RL28_COREF Tax_Id=152794 (rpmB)RecName: Full=50S ribosomal protein L28;[Corynebacterium efficiens] Length = 78 Score = 86.7 bits (213), Expect = 8e-16 Identities = 42/78 (53%), Positives = 53/78 (67%) Query: 1 MSARCQVTGRTVSFGNTVXXXXXXXXXXWSPNIQLKTYYLPSENRRIKLRVSAKGIKVID 60 MSA CQVTGR SFG +V W+PN+Q + +++PS R I L VS KG+KVID Sbjct: 1 MSAHCQVTGRQPSFGKSVSHSHRRTSRRWNPNVQRRKFFVPSMGRTITLTVSTKGLKVID 60 Query: 61 RDGIEATVARLRRAGEQI 78 RDGIEA VA++R GE+I Sbjct: 61 RDGIEAVVAQIRARGEKI 78 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.320 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 407,389,504 Number of extensions: 10593084 Number of successful extensions: 24291 Number of sequences better than 10.0: 1028 Number of HSP's gapped: 24346 Number of HSP's successfully gapped: 1028 Length of query: 78 Length of database: 3,846,993,858 Length adjustment: 49 Effective length of query: 29 Effective length of database: 3,294,508,911 Effective search space: 95540758419 Effective search space used: 95540758419 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 75 (33.5 bits)