BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0481 (89 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HN07|B2HN07_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 181 2e-44 tr|A0PMZ5|A0PMZ5_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 181 2e-44 tr|C6DX34|C6DX34_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 122 2e-26 tr|Q7D6J2|Q7D6J2_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 122 2e-26 tr|Q7TXT7|Q7TXT7_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 115 2e-24 tr|P71643|P71643_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 115 2e-24 tr|C1AFS2|C1AFS2_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 115 2e-24 tr|A5U6G1|A5U6G1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 115 2e-24 tr|A1KMF1|A1KMF1_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 115 2e-24 tr|A5WR60|A5WR60_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 115 2e-24 tr|A2VLE1|A2VLE1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 115 2e-24 tr|A5EJH8|A5EJH8_BRASB Tax_Id=288000 SubName: Full=Putative hist... 35 2.1 >tr|B2HN07|B2HN07_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 89 Score = 181 bits (460), Expect = 2e-44 Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN Sbjct: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 Query: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 YGPGHVPNDYGLAVERAIDAYLEAWPIYR Sbjct: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 >tr|A0PMZ5|A0PMZ5_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 89 Score = 181 bits (460), Expect = 2e-44 Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN Sbjct: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 Query: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 YGPGHVPNDYGLAVERAIDAYLEAWPIYR Sbjct: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 >tr|C6DX34|C6DX34_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 89 Score = 122 bits (305), Expect = 2e-26 Identities = 57/89 (64%), Positives = 68/89 (76%) Query: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 ME+SV+N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL Sbjct: 1 MEKSVSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKT 60 Query: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 +GP VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 FGPDWVPNDYGLKIERAIDAYLETWPIYR 89 >tr|Q7D6J2|Q7D6J2_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 89 Score = 122 bits (305), Expect = 2e-26 Identities = 57/89 (64%), Positives = 68/89 (76%) Query: 1 MEESVNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSAN 60 ME+SV+N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL Sbjct: 1 MEKSVSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKT 60 Query: 61 YGPGHVPNDYGLAVERAIDAYLEAWPIYR 89 +GP VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 FGPDWVPNDYGLKIERAIDAYLETWPIYR 89 >tr|Q7TXT7|Q7TXT7_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb2831;[Mycobacterium bovis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|P71643|P71643_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|C1AFS2|C1AFS2_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|A5U6G1|A5U6G1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|A1KMF1|A1KMF1_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2826;[Mycobacterium bovis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|A5WR60|A5WR60_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|A2VLE1|A2VLE1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 85 Score = 115 bits (287), Expect = 2e-24 Identities = 53/85 (62%), Positives = 64/85 (75%) Query: 5 VNNILDVVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSHALSANYGPG 64 ++N+LD + +EHR +I EL RNP L ELR +KPTN+QSDAV+D LS AL +GP Sbjct: 1 MSNVLDAISTEHRPVIEQELENRNPALFDELRRTEKPTNEQSDAVIDVLSDALMKTFGPD 60 Query: 65 HVPNDYGLAVERAIDAYLEAWPIYR 89 VPNDYGL +ERAIDAYLE WPIYR Sbjct: 61 WVPNDYGLKIERAIDAYLETWPIYR 85 >tr|A5EJH8|A5EJH8_BRASB Tax_Id=288000 SubName: Full=Putative histidine kinase with PAS/PAC motif;[Bradyrhizobium sp.] Length = 692 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 11 VVPSEHRVLIMDELTRRNPDLLAELRTVQKPTNDQSDAVVDALSH 55 V +EH+ L++ EL R + LA +R++ + T D SD++ D SH Sbjct: 487 VSATEHQKLLLAELQHRVRNTLAVIRSIIRRTGDSSDSIEDFASH 531 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.315 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 688,559,883 Number of extensions: 23792216 Number of successful extensions: 74612 Number of sequences better than 10.0: 12 Number of HSP's gapped: 75290 Number of HSP's successfully gapped: 12 Length of query: 89 Length of database: 3,846,993,858 Length adjustment: 59 Effective length of query: 30 Effective length of database: 3,181,756,881 Effective search space: 95452706430 Effective search space used: 95452706430 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 75 (33.5 bits)