BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_0536
         (218 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HNV8|B2HNV8_MYCMM Tax_Id=216594 SubName: Full=Transcription...   376   e-103
tr|A0PN56|A0PN56_MYCUA Tax_Id=362242 SubName: Full=Transcription...   375   e-102
tr|Q73TJ5|Q73TJ5_MYCPA Tax_Id=1770 (fadD27)SubName: Full=FadD27;...   282   2e-74
tr|A0QM65|A0QM65_MYCA1 Tax_Id=243243 SubName: Full=FadD27 protei...   281   4e-74
tr|Q7U2E1|Q7U2E1_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC...   270   6e-71
tr|Q7DA42|Q7DA42_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE TRANSC...   270   6e-71
tr|C6DRT3|C6DRT3_MYCTK Tax_Id=478434 SubName: Full=Transcription...   270   6e-71
tr|C1AJV1|C1AJV1_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   270   6e-71
tr|A5TZ01|A5TZ01_MYCTA Tax_Id=419947 SubName: Full=Putative marr...   270   6e-71
tr|A1KF96|A1KF96_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   270   6e-71
tr|A5WIY3|A5WIY3_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   270   6e-71
tr|A4KNU1|A4KNU1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   270   6e-71
tr|A2VNI9|A2VNI9_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   270   6e-71
tr|Q1BF46|Q1BF46_MYCSS Tax_Id=164756 SubName: Full=Transcription...   246   2e-63
tr|A3PTE2|A3PTE2_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   246   2e-63
tr|A1U9T6|A1U9T6_MYCSK Tax_Id=189918 SubName: Full=Transcription...   246   2e-63
tr|A4T0U2|A4T0U2_MYCGI Tax_Id=350054 SubName: Full=Putative tran...   237   6e-61
tr|A1T257|A1T257_MYCVP Tax_Id=350058 SubName: Full=FadD27;[Mycob...   218   5e-55
tr|A0QQ35|A0QQ35_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   214   5e-54
tr|B1MBF4|B1MBF4_MYCA9 Tax_Id=561007 SubName: Full=Hypothetical ...   166   1e-39
tr|B1MJP5|B1MJP5_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR...   146   2e-33
tr|C3JN86|C3JN86_RHOER Tax_Id=596309 SubName: Full=Transcription...   144   7e-33
tr|C1AWB5|C1AWB5_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...   142   3e-32
tr|C0ZSM5|C0ZSM5_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...   142   3e-32
tr|Q0S5R5|Q0S5R5_RHOSR Tax_Id=101510 SubName: Full=Possible tran...   139   2e-31
tr|D0L6U4|D0L6U4_GORB4 Tax_Id=526226 SubName: Full=Putative unch...   122   4e-26
tr|Q0S644|Q0S644_RHOSR Tax_Id=101510 SubName: Full=Possible tran...    92   3e-17
tr|A0QS53|A0QS53_MYCS2 Tax_Id=246196 SubName: Full=Transcription...    92   4e-17
tr|C1AV18|C1AV18_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    91   1e-16
tr|Q5Z1B2|Q5Z1B2_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    89   3e-16
tr|B1MN11|B1MN11_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR...    89   4e-16
tr|Q1BDG2|Q1BDG2_MYCSS Tax_Id=164756 SubName: Full=Transcription...    88   7e-16
tr|A3PV60|A3PV60_MYCSJ Tax_Id=164757 SubName: Full=Transcription...    88   7e-16
tr|A1UBI1|A1UBI1_MYCSK Tax_Id=189918 SubName: Full=Transcription...    88   7e-16
tr|A1T4H9|A1T4H9_MYCVP Tax_Id=350058 SubName: Full=Transcription...    87   2e-15
tr|B2HG14|B2HG14_MYCMM Tax_Id=216594 SubName: Full=Transcription...    85   5e-15
tr|Q1B727|Q1B727_MYCSS Tax_Id=164756 SubName: Full=Transcription...    84   8e-15
tr|A3Q1G1|A3Q1G1_MYCSJ Tax_Id=164757 SubName: Full=Transcription...    84   8e-15
tr|A1UHZ8|A1UHZ8_MYCSK Tax_Id=189918 SubName: Full=Transcription...    84   8e-15
tr|Q5YU39|Q5YU39_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    83   2e-14
tr|Q82RJ2|Q82RJ2_STRAW Tax_Id=33903 SubName: Full=Putative TetR-...    83   2e-14
tr|C3JRM4|C3JRM4_RHOER Tax_Id=596309 SubName: Full=Transcription...    83   2e-14
tr|Q8GNL7|Q8GNL7_MYCAB Tax_Id=36809 (ORF R3c)SubName: Full=Putat...    82   4e-14
tr|D0LDY8|D0LDY8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...    82   4e-14
tr|C7MXJ7|C7MXJ7_SACVD Tax_Id=471857 SubName: Full=Transcription...    81   7e-14
tr|Q73V60|Q73V60_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    81   9e-14
tr|A1SMM8|A1SMM8_NOCSJ Tax_Id=196162 SubName: Full=Putative tran...    81   9e-14
tr|A0QJQ4|A0QJQ4_MYCA1 Tax_Id=243243 SubName: Full=Transcription...    81   9e-14
tr|Q5Z0Q9|Q5Z0Q9_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    80   2e-13
tr|A4T7F6|A4T7F6_MYCGI Tax_Id=350054 SubName: Full=Putative tran...    79   3e-13

>tr|B2HNV8|B2HNV8_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Possibly TetR-family);[Mycobacterium
           marinum]
          Length = 218

 Score =  376 bits (966), Expect = e-103
 Identities = 196/218 (89%), Positives = 196/218 (89%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           MRPYRGVEATERLAARRSQ            DRDIAELTVRGICRQAGLSARYFYESFPD
Sbjct: 1   MRPYRGVEATERLAARRSQLLESGLELLGSSDRDIAELTVRGICRQAGLSARYFYESFPD 60

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA
Sbjct: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL
Sbjct: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180

Query: 181 EPGQLVDQLASLLDELSDPRLYGLXXXXXXXXXXSPAQ 218
           EPGQLVDQLASLLDELSDPRLYGL          SPAQ
Sbjct: 181 EPGQLVDQLASLLDELSDPRLYGLRGTRAGATAASPAQ 218


>tr|A0PN56|A0PN56_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Possibly TetR-family);[Mycobacterium
           ulcerans]
          Length = 218

 Score =  375 bits (962), Expect = e-102
 Identities = 195/218 (89%), Positives = 195/218 (89%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           MRPYRGVEATERLA RRSQ            DRDIAELTVRGICRQAGLSARYFYESFPD
Sbjct: 1   MRPYRGVEATERLATRRSQLLESGLELLGSSDRDIAELTVRGICRQAGLSARYFYESFPD 60

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA
Sbjct: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL
Sbjct: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180

Query: 181 EPGQLVDQLASLLDELSDPRLYGLXXXXXXXXXXSPAQ 218
           EPGQLVDQLASLLDELSDPRLYGL          SPAQ
Sbjct: 181 EPGQLVDQLASLLDELSDPRLYGLRGTRAGATAASPAQ 218


>tr|Q73TJ5|Q73TJ5_MYCPA Tax_Id=1770 (fadD27)SubName:
           Full=FadD27;[Mycobacterium paratuberculosis]
          Length = 217

 Score =  282 bits (721), Expect = 2e-74
 Identities = 142/203 (69%), Positives = 162/203 (79%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR++              DI+ +TVRG+CR+AGL+ARYFYESF DK
Sbjct: 8   RPYRGVEAAERLATRRNRLLAAGLDLLGDQRPDISAVTVRGVCRRAGLAARYFYESFTDK 67

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+  VFDWVV +LA T QAAVATVP  EQ RAGIA IVRTI  DAR+GRLLFST LA+
Sbjct: 68  DEFVSCVFDWVVAELAATTQAAVATVPADEQTRAGIANIVRTITDDARVGRLLFSTQLAD 127

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
           PVVVRKR ESSALFAMLSGQH G+AL++PANDRIK  AHF+VGGV QTISAW+ GDV LE
Sbjct: 128 PVVVRKRAESSALFAMLSGQHVGNALQVPANDRIKAAAHFVVGGVGQTISAWLAGDVRLE 187

Query: 182 PGQLVDQLASLLDELSDPRLYGL 204
           P +LVD LA+LLDEL++P LY L
Sbjct: 188 PDELVDHLAALLDELAEPNLYRL 210


>tr|A0QM65|A0QM65_MYCA1 Tax_Id=243243 SubName: Full=FadD27
           protein;[Mycobacterium avium]
          Length = 220

 Score =  281 bits (719), Expect = 4e-74
 Identities = 141/201 (70%), Positives = 162/201 (80%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR++             ++IA +TVRG+CR+AGL+ARYFYESF DK
Sbjct: 11  RPYRGVEAAERLATRRNRLLGAGLDLLGAEQQNIAAVTVRGVCRRAGLAARYFYESFTDK 70

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           D+F+  VFDWVV +LA T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LA+
Sbjct: 71  DQFVACVFDWVVAELAATTQAAVTAVPAHEQTRAGMANIVRTITEDARVGRLLFSTQLAD 130

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
           PVVVRKR ESSALFAMLSGQH GDALR+PANDRIK  AHF+VGGVAQTISAW+ G+V LE
Sbjct: 131 PVVVRKRAESSALFAMLSGQHVGDALRMPANDRIKAAAHFVVGGVAQTISAWLAGEVRLE 190

Query: 182 PGQLVDQLASLLDELSDPRLY 202
           P QLVDQLA+LLDEL++P LY
Sbjct: 191 PDQLVDQLAALLDELAEPALY 211


>tr|Q7U2E1|Q7U2E1_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY
           TETR-FAMILY);[Mycobacterium bovis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|Q7DA42|Q7DA42_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY
           TETR-FAMILY); SubName: Full=Putative uncharacterized
           protein;[Mycobacterium tuberculosis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|C6DRT3|C6DRT3_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|C1AJV1|C1AJV1_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|A5TZ01|A5TZ01_MYCTA Tax_Id=419947 SubName: Full=Putative
           marr-family transcriptional regulatory
           protein;[Mycobacterium tuberculosis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|A1KF96|A1KF96_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein (Possibly
           tetr-family);[Mycobacterium bovis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|A5WIY3|A5WIY3_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein,
           tetR-family;[Mycobacterium tuberculosis]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|A4KNU1|A4KNU1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein (Possibly
           tetR-family);[Mycobacterium tuberculosis str. Haarlem]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|A2VNI9|A2VNI9_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 241

 Score =  270 bits (691), Expect = 6e-71
 Identities = 138/200 (69%), Positives = 150/200 (75%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           RPYRGVEA ERLA RR Q              DIAELT+R ICR+AGLS RYFYESF DK
Sbjct: 6   RPYRGVEAAERLATRRRQSLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DEF+G VFDWVV +L  T QAAV  VP  EQ RAG+A IVRTI  DAR+GRLLFST LAN
Sbjct: 66  DEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLAN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+ RKR ESSALFAMLSGQHA D L  PAND +K  AHF VGGV QTISAW+ GDV L+
Sbjct: 126 AVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAGDVRLD 185

Query: 182 PGQLVDQLASLLDELSDPRL 201
           P QLVDQLA+LLDEL+DP L
Sbjct: 186 PDQLVDQLAALLDELTDPNL 205


>tr|Q1BF46|Q1BF46_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 205

 Score =  246 bits (627), Expect = 2e-63
 Identities = 121/202 (59%), Positives = 149/202 (73%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +RPYRGVEA ERLA RR +            ++D+AELTVR ICR+AG++ RYFYE F D
Sbjct: 4   VRPYRGVEAPERLAQRRQRFLEAGLDLLGSAEQDLAELTVRAICRRAGVTVRYFYECFTD 63

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KD+F+  VFDWV+  +ATT QAA A  PP  Q+RA + +I+RT+  D RIGRLLFS+ L+
Sbjct: 64  KDDFVAAVFDWVINGIATTTQAAAAAAPPRAQSRAVMTDIIRTVSEDPRIGRLLFSSQLS 123

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           N VVVRKR ES ALFAMLSG+HA  ALR   NDRIK  AHF+VGGV QTISAW+ G   L
Sbjct: 124 NTVVVRKRAESGALFAMLSGRHASAALRQSENDRIKAAAHFVVGGVGQTISAWLAGSFAL 183

Query: 181 EPGQLVDQLASLLDELSDPRLY 202
           +P  LVDQL +++D+L+DPRLY
Sbjct: 184 DPDGLVDQLTAMVDQLADPRLY 205


>tr|A3PTE2|A3PTE2_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 205

 Score =  246 bits (627), Expect = 2e-63
 Identities = 121/202 (59%), Positives = 149/202 (73%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +RPYRGVEA ERLA RR +            ++D+AELTVR ICR+AG++ RYFYE F D
Sbjct: 4   VRPYRGVEAPERLAQRRQRFLEAGLDLLGSAEQDLAELTVRAICRRAGVTVRYFYECFTD 63

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KD+F+  VFDWV+  +ATT QAA A  PP  Q+RA + +I+RT+  D RIGRLLFS+ L+
Sbjct: 64  KDDFVAAVFDWVINGIATTTQAAAAAAPPRAQSRAVMTDIIRTVSEDPRIGRLLFSSQLS 123

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           N VVVRKR ES ALFAMLSG+HA  ALR   NDRIK  AHF+VGGV QTISAW+ G   L
Sbjct: 124 NTVVVRKRAESGALFAMLSGRHASAALRQSENDRIKAAAHFVVGGVGQTISAWLAGSFAL 183

Query: 181 EPGQLVDQLASLLDELSDPRLY 202
           +P  LVDQL +++D+L+DPRLY
Sbjct: 184 DPDGLVDQLTAMVDQLADPRLY 205


>tr|A1U9T6|A1U9T6_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 205

 Score =  246 bits (627), Expect = 2e-63
 Identities = 121/202 (59%), Positives = 149/202 (73%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +RPYRGVEA ERLA RR +            ++D+AELTVR ICR+AG++ RYFYE F D
Sbjct: 4   VRPYRGVEAPERLAQRRQRFLEAGLDLLGSAEQDLAELTVRAICRRAGVTVRYFYECFTD 63

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KD+F+  VFDWV+  +ATT QAA A  PP  Q+RA + +I+RT+  D RIGRLLFS+ L+
Sbjct: 64  KDDFVAAVFDWVINGIATTTQAAAAAAPPRAQSRAVMTDIIRTVSEDPRIGRLLFSSQLS 123

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           N VVVRKR ES ALFAMLSG+HA  ALR   NDRIK  AHF+VGGV QTISAW+ G   L
Sbjct: 124 NTVVVRKRAESGALFAMLSGRHASAALRQSENDRIKAAAHFVVGGVGQTISAWLAGSFAL 183

Query: 181 EPGQLVDQLASLLDELSDPRLY 202
           +P  LVDQL +++D+L+DPRLY
Sbjct: 184 DPDGLVDQLTAMVDQLADPRLY 205


>tr|A4T0U2|A4T0U2_MYCGI Tax_Id=350054 SubName: Full=Putative
           transcriptional regulator, TetR family;[Mycobacterium
           gilvum]
          Length = 209

 Score =  237 bits (605), Expect = 6e-61
 Identities = 122/202 (60%), Positives = 146/202 (72%), Gaps = 1/202 (0%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +RPYRGV+A  R+A RR +              +  ELTVR IC Q+GL+ARYFYESF D
Sbjct: 7   VRPYRGVDAPARVAERRRRLLEAGLDLLGG-QLNPPELTVRAICAQSGLAARYFYESFTD 65

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KD F+G VFD V+ D+ATT QAAVA  PP EQ+R G+A IVR I  DAR+GRLLF+ HL 
Sbjct: 66  KDVFVGAVFDRVIADIATTTQAAVAAAPPREQSRQGMANIVRAISEDARVGRLLFNAHLD 125

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           NPVVVRKR ES ALFA+LSGQHAG ALR+  NDRI   AHF+VGGVAQT+SAW+ GD+  
Sbjct: 126 NPVVVRKRAESGALFALLSGQHAGSALRLERNDRITSAAHFVVGGVAQTLSAWLAGDLTF 185

Query: 181 EPGQLVDQLASLLDELSDPRLY 202
              QL  QL +L+D+L+DP LY
Sbjct: 186 TEAQLAAQLGALIDQLADPALY 207


>tr|A1T257|A1T257_MYCVP Tax_Id=350058 SubName:
           Full=FadD27;[Mycobacterium vanbaalenii]
          Length = 165

 Score =  218 bits (554), Expect = 5e-55
 Identities = 106/163 (65%), Positives = 126/163 (77%)

Query: 40  VRGICRQAGLSARYFYESFPDKDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAE 99
           +R IC Q+GL+ARYFYESF DKD F+G VFDWVV D+A T QAAVA  P  EQ+R G+A 
Sbjct: 1   MRAICAQSGLAARYFYESFADKDVFVGAVFDWVVADIAATTQAAVAAAPVREQSRQGMAN 60

Query: 100 IVRTIVGDARIGRLLFSTHLANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGA 159
           IV TI  D R+GRLLF+T L NPVVVRKR ES ALFA+LSGQHAG AL++  N+RI+  A
Sbjct: 61  IVNTISDDIRVGRLLFNTRLDNPVVVRKRAESGALFALLSGQHAGTALQVEPNERIRAAA 120

Query: 160 HFIVGGVAQTISAWIEGDVELEPGQLVDQLASLLDELSDPRLY 202
           HF VGGVAQT+SAW+ GD+   P QL  QL +LLD+L+DP LY
Sbjct: 121 HFAVGGVAQTLSAWLAGDLAFTPEQLAGQLGALLDQLADPTLY 163


>tr|A0QQ35|A0QQ35_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium smegmatis]
          Length = 203

 Score =  214 bits (545), Expect = 5e-54
 Identities = 110/198 (55%), Positives = 137/198 (69%), Gaps = 3/198 (1%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +RPYRG+EA +RLA RR Q            +   AE+TVR +C++AGL+ARYFYESF D
Sbjct: 4   VRPYRGIEAADRLAQRRGQLLAAGLDLLGDEN---AEVTVRAVCQRAGLAARYFYESFGD 60

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           KD F+  V+DWV+ ++A + QAAVA+VP  EQ  A +  IVRTI  D RIGRLLFS  L+
Sbjct: 61  KDAFVSEVYDWVIAEIAASTQAAVASVPLAEQTTAAMTNIVRTIADDPRIGRLLFSAKLS 120

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           N VVVRKR E    FA L GQH  DALR+P ND+++  AHF VGGV QTISAW+ G+V  
Sbjct: 121 NEVVVRKRVEGIGFFAGLLGQHTVDALRLPENDQLRATAHFAVGGVTQTISAWLGGEVSF 180

Query: 181 EPGQLVDQLASLLDELSD 198
            P +LV QL SLLD L++
Sbjct: 181 TPDELVQQLRSLLDALAN 198


>tr|B1MBF4|B1MBF4_MYCA9 Tax_Id=561007 SubName: Full=Hypothetical
           transcriptional regulator;[Mycobacterium abscessus]
          Length = 208

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/192 (43%), Positives = 117/192 (60%), Gaps = 1/192 (0%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ A ERLA RR +            D    +LT+R +C+++GL+ RYFYESF DK
Sbjct: 7   RSYSGLPADERLARRRQRLLEVGLDILGTPDGS-GDLTLRTVCQRSGLAQRYFYESFADK 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           DE+   +FDW +  LA T++A VA   P  Q RAGI  +VR +  D RIG+LL+S H  N
Sbjct: 66  DEYAAAIFDWAIEGLAATVEAEVAAAHPRLQVRAGITSVVRAVSADRRIGQLLYSRHQVN 125

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
           PV+VR+R +++A+F  L  QH  D  R      + V AHFIVGGV Q ++AW+  +V + 
Sbjct: 126 PVLVRRRFDATAMFVSLFAQHLHDWFRRDDQGNLPVLAHFIVGGVGQAVTAWLHQEVTIS 185

Query: 182 PGQLVDQLASLL 193
             +L++QL  +L
Sbjct: 186 EDELIEQLVDML 197


>tr|B1MJP5|B1MJP5_MYCA9 Tax_Id=561007 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           abscessus]
          Length = 199

 Score =  146 bits (368), Expect = 2e-33
 Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 2/192 (1%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y GVEA +R A RR++                  LTVRG+C+ AG+ ARYFYE+F D 
Sbjct: 5   RVYGGVEAPDRQAERRNRLLDAGLDLLTSGPAP--NLTVRGVCKHAGVVARYFYENFTDL 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
           D+    VFD  +G +ATT Q AV   P PE+  AGIA +VR I GD RIG L+F  + AN
Sbjct: 63  DQLSAEVFDRAIGHVATTTQQAVDAAPLPEKTSAGIANLVRVIEGDPRIGTLMFGNNPAN 122

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
            V+  +R  +  +FA LSGQH     +   ++ ++  +++ VGGV  T++AW+ G ++L 
Sbjct: 123 SVIAERRQAAWDMFAALSGQHMNKTYQATNDETLRAVSYYTVGGVGHTLAAWVSGQLKLP 182

Query: 182 PGQLVDQLASLL 193
             +LV  L  LL
Sbjct: 183 GTELVRVLTELL 194


>tr|C3JN86|C3JN86_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, TetR family;[Rhodococcus erythropolis SK121]
          Length = 223

 Score =  144 bits (363), Expect = 7e-33
 Identities = 82/193 (42%), Positives = 118/193 (61%), Gaps = 4/193 (2%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y GV+   R+A RR              +    ELTVRG+C+QAG++ARYFYESF D+
Sbjct: 26  RSYGGVDGALRVAQRREALIEAGLELMGSAE---PELTVRGVCKQAGVAARYFYESFTDR 82

Query: 62  DEFIGGVFDWVVGDLATTIQAAV-ATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           D  +  V+D V+ D+A + QAAV A      +A AGIA IVRTI  D R GRLLFS+ L 
Sbjct: 83  DALMSAVYDTVITDIAVSTQAAVDAAETERGKALAGIANIVRTIANDPRRGRLLFSSALT 142

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           +PV+  KR  S+ +F  L   +A    R+  +  + + A F+VGG+AQT+SAW++G +++
Sbjct: 143 SPVLAEKRQASTTIFIGLLAANAKTFYRLNDSGHLTLTATFLVGGLAQTLSAWLDGYIDV 202

Query: 181 EPGQLVDQLASLL 193
              +LV + A++L
Sbjct: 203 TEEELVAECAAIL 215


>tr|C1AWB5|C1AWB5_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 207

 Score =  142 bits (358), Expect = 3e-32
 Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 3/194 (1%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G E  +R + RR Q            D D A LTVRG+C+QAGL+ RYFYESFPD+
Sbjct: 7   RVYGGQEGDQRRSERRGQLIEAGLDLLGSADGDHA-LTVRGVCKQAGLATRYFYESFPDR 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQ--ARAGIAEIVRTIVGDARIGRLLFSTHL 119
           D     V+D VV  +AT+   AV    P E+   RAG+  IVR +  D R GRL+FS   
Sbjct: 66  DALTVAVYDHVVERIATSTLDAVTNAGPGEREIVRAGVRNIVREVAEDPRHGRLMFSVAQ 125

Query: 120 ANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVE 179
           ++ V+ ++R +SS LFA L  +       +  + R+ + AHF+VGG+AQT++AW+ G V 
Sbjct: 126 SSAVLAQRRLDSSRLFAGLVTKQTVGYYEVAESPRLDLAAHFMVGGLAQTLTAWLNGTVT 185

Query: 180 LEPGQLVDQLASLL 193
           L   +LVD    LL
Sbjct: 186 LPEEELVDTCTELL 199


>tr|C0ZSM5|C0ZSM5_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 206

 Score =  142 bits (357), Expect = 3e-32
 Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 4/193 (2%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y GV+   R+A RR              +    ELTVRG+C++AG++ARYFYESF D+
Sbjct: 9   RSYGGVDGALRVAQRRETLIEAGLELMGSAE---PELTVRGVCKKAGVAARYFYESFTDR 65

Query: 62  DEFIGGVFDWVVGDLATTIQAAV-ATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLA 120
           D  +  V+D V+ D+A + QAAV A      +A AGIA IVRTI  D R GRLLFS+ L 
Sbjct: 66  DALMSAVYDTVITDIAVSTQAAVDAAETERGKALAGIANIVRTIAQDPRRGRLLFSSALT 125

Query: 121 NPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVEL 180
           +PV+  KR  S+ +F  L   +A    R+  +  + + A F+VGG+AQT+SAW++G +++
Sbjct: 126 SPVLAEKRRASTTIFIGLLAANAKTFYRLNDSGHLTLTATFLVGGLAQTLSAWLDGYIDV 185

Query: 181 EPGQLVDQLASLL 193
              +LV + A++L
Sbjct: 186 TEEELVAECAAIL 198


>tr|Q0S5R5|Q0S5R5_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator;[Rhodococcus sp.]
          Length = 222

 Score =  139 bits (351), Expect = 2e-31
 Identities = 81/194 (41%), Positives = 112/194 (57%), Gaps = 3/194 (1%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G E  +R + RR Q            D D A LTVRG+C+QAGL+ RYFYESF D+
Sbjct: 22  RVYGGQERDQRKSERRGQLIEAGLDLLGSADGDHA-LTVRGVCKQAGLATRYFYESFTDR 80

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQ--ARAGIAEIVRTIVGDARIGRLLFSTHL 119
           D     V+D VV  +AT+   AV+   P E+   RAG+  IVR +  D R GRL+FS   
Sbjct: 81  DALAVAVYDHVVDRIATSTLDAVSNAGPGERDIVRAGVRNIVREVAEDPRQGRLMFSVAQ 140

Query: 120 ANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVE 179
           ++ V+ ++R +SS LFA L  +       +  + R+ + AHF+VGG+AQT++AW+ G V 
Sbjct: 141 SSAVLAQRRLDSSRLFAGLVTKQTVGYYEVAESPRLDLAAHFMVGGLAQTLTAWLNGTVT 200

Query: 180 LEPGQLVDQLASLL 193
           L   +LVD    LL
Sbjct: 201 LPEEELVDTCTELL 214


>tr|D0L6U4|D0L6U4_GORB4 Tax_Id=526226 SubName: Full=Putative
           uncharacterized protein;[Gordonia bronchialis]
          Length = 244

 Score =  122 bits (305), Expect = 4e-26
 Identities = 77/199 (38%), Positives = 109/199 (54%), Gaps = 10/199 (5%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           +R Y G     R+A RRS             +   A +TVRG+CRQAGL+ARYFYESF  
Sbjct: 22  LRAYGGEGGDTRVARRRSALIDAGLDLLGAGEN--ATVTVRGVCRQAGLTARYFYESFES 79

Query: 61  KDEFIGGVFDWVVGDLATT-IQAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHL 119
            DE +G ++D V+ +LA   ++A         + R G+  +V  I  D R GRLLFS  L
Sbjct: 80  VDELVGVLYDEVISELADAGLRAFDEGSDMESKVRGGVTAMVDIIAADQRKGRLLFSQSL 139

Query: 120 ANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVG-----AHFIVGGVAQTISAWI 174
            +PV+  KR ES+ LFA L+ Q A     I  +  +  G     AH+ VGG+++ ++AW+
Sbjct: 140 QSPVIAAKRMESTTLFAGLTLQSASGV--IDLDPELGSGAAFGIAHYQVGGLSRLLAAWV 197

Query: 175 EGDVELEPGQLVDQLASLL 193
           EGDV++    +VD    LL
Sbjct: 198 EGDVDMTRDAIVDLSVRLL 216


>tr|Q0S644|Q0S644_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator, TetR family
           protein;[Rhodococcus sp.]
          Length = 205

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 8/191 (4%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R YRG  + +R A RR++              + A +T   IC +A L+ RYFYESF D+
Sbjct: 6   RQYRGRSSEQRAAERRARLLEAGLQVFGTVGGEKATMTA--ICAEAKLTERYFYESFRDR 63

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATV--PPPEQARAGIAEIVRTIVGDARIGRL-LFSTH 118
           D+ +  V + +  ++A   +  + TV   P  +ARA IA  V  +  D R GR+ +  + 
Sbjct: 64  DDLLVQVIEGIAAEIAEAARVTLQTVTGDPEVRARAAIATFVDILTADPRKGRVSIIESA 123

Query: 119 LANPVVVRKRTESSALFAMLSGQHAGDAL--RIPANDRIKVGAHFIVGGVAQTISAWIEG 176
            A P+  R+R E    FA+L  + + +    R  ++ + ++ A   VGG+A+ ++AW+ G
Sbjct: 124 AAEPLRTRRR-ELLRAFALLVAEESKELYGDRAWSSPQDEITALLFVGGLAELMTAWLNG 182

Query: 177 DVELEPGQLVD 187
           ++E+ P Q+VD
Sbjct: 183 EIEVSPEQIVD 193


>tr|A0QS53|A0QS53_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium smegmatis]
          Length = 199

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 12/196 (6%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV  T+R A RR+             D     L+VR +CR+ GL+ RYFYESF D D+
Sbjct: 7   WAGVPLTDRRAERRA--LLVDAAFRLFGDGGETALSVRSVCRECGLNTRYFYESFADTDD 64

Query: 64  FIGGVFDWVVGDLATTIQAAVATVPPPEQA--RAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            IG V+D V   LA  ++AA+       +A  RAGIA ++     D R GR+LF+   AN
Sbjct: 65  LIGAVYDEVSALLAADVEAAMEGAGNSLRARTRAGIAAVLGFSSADPRRGRVLFTDARAN 124

Query: 122 PVVVRKRTESSALF--AMLSGQHAGDALRIPANDRI--KVGAHFIVGGVAQTISAWIEGD 177
           PV+ ++R  +  L   A+LS    G  L  P +D +  +VGA    G +A+    W+ G+
Sbjct: 125 PVLAQRRAVTQDLLREAVLS---EGGRLN-PGSDPVAAQVGAAMYTGAMAELAQQWLAGN 180

Query: 178 VELEPGQLVDQLASLL 193
           +  +   +VD    L+
Sbjct: 181 LGDDLDAVVDHALRLV 196


>tr|C1AV18|C1AV18_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 205

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 8/191 (4%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R YRG  + ER A RR++              D A +T   IC +A L+ RYFYESF  +
Sbjct: 6   RQYRGRSSEERAAERRARLLEAGLQVFGTVGGDKATMTA--ICAEAKLTERYFYESFRGR 63

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATV--PPPEQARAGIAEIVRTIVGDARIGRL-LFSTH 118
           D+ +  V + +  ++    +  V TV   P  + RA IA  V  +  D R GR+ +  + 
Sbjct: 64  DDLLVQVIEGIAAEIGEAARVTVRTVTGDPEVRVRAAIAAFVDILTADPRKGRVSIIESA 123

Query: 119 LANPVVVRKRTESSALFAMLSGQHAGDAL--RIPANDRIKVGAHFIVGGVAQTISAWIEG 176
            A P+  R+R E    FA+L  + A +    R  ++ + ++ A   VGG+A+ ++AW+ G
Sbjct: 124 GAEPLRTRRR-ELLRAFALLVAEQARELYGDRAWSSPQDEITALLFVGGLAELMTAWLNG 182

Query: 177 DVELEPGQLVD 187
           ++E+ P Q+VD
Sbjct: 183 EIEVSPEQIVD 193


>tr|Q5Z1B2|Q5Z1B2_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 213

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 7/191 (3%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y GV A ER A RR+                 A+LTV G+C +AGL+ RY+YE+F  +
Sbjct: 5   RTYGGVSAEERRAQRRTALLNAALEIVGT--EGTAKLTVSGLCARAGLNERYYYENFDSR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPPEQAR--AGIAEIVRTIVGDARIGRLLFSTHL 119
           +  +  +FD +  +LA  I AA+   P   +A+  A IA  +  +  D R  R      +
Sbjct: 63  EAVLAALFDQIAEELALAILAALREAPDETRAKAHAAIAAGIHLLTDDPRKARAALIAGM 122

Query: 120 ANPVVVRKRTESSALFA-MLSGQHAGDALRI-PANDR-IKVGAHFIVGGVAQTISAWIEG 176
           + P +  +  ++   FA M++ Q  G   R  P +D  I   A ++VGG+  T+++W++G
Sbjct: 123 STPELRARGNQTVRAFARMVAAQGVGFYGRSEPVSDAVIDFRATYLVGGLVHTLTSWLQG 182

Query: 177 DVELEPGQLVD 187
           ++ L+  +LV+
Sbjct: 183 EIALDRDELVE 193


>tr|B1MN11|B1MN11_MYCA9 Tax_Id=561007 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           abscessus]
          Length = 215

 Score = 88.6 bits (218), Expect = 4e-16
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           Y G  A ER A RR +                A  TVR IC+ AGL+ RYFYE F   DE
Sbjct: 10  YGGRTADERRAERRRRLLEAGLEVMA--SSGWAATTVREICKTAGLNTRYFYECFDGLDE 67

Query: 64  FIGGVFDWVVGDLATTIQAAVATVPPP--EQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +  VFDW++ D   T  +A+A        Q  AG+   V  +  D R  R++ +  + +
Sbjct: 68  LLVAVFDWIIEDSIATAGSAMAAADKDSRSQVHAGVVGAVTALTADPRRARVIATEAMGS 127

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
             + R+R   +   A++ G    +       +   V A  +  GVA T+ AW++G + LE
Sbjct: 128 QRLTRRRMRLTHYMALMLGAARAEFDPEADPNYTAVQAEALAAGVAGTVLAWLDGRLRLE 187

Query: 182 PGQLVDQLASLLDE 195
             +L +  A  +D+
Sbjct: 188 REELAEYTAQFVDQ 201


>tr|Q1BDG2|Q1BDG2_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 199

 Score = 87.8 bits (216), Expect = 7e-16
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV  T+R A RR+                 A L VR +CR+ GL+ RYFYESF D D+
Sbjct: 7   WAGVPLTDRRAERRALLIDAALRLFGTGGE--AALAVRSVCRECGLNTRYFYESFADTDD 64

Query: 64  FIGGVFDWVVGDLATTIQAAVATVPPP--EQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +G ++D V   LA  + AA+        E+ RAG+A ++     D R GR+LF+   AN
Sbjct: 65  LLGALYDEVSAQLAADVDAAMTAAGSSLRERTRAGMAAVLGFSSADPRRGRVLFTDARAN 124

Query: 122 PVVVRKRTESSALF---AMLSGQHAGDALRIPANDRI--KVGAHFIVGGVAQTISAWIEG 176
           PV+  +R  +  L     ++ G         P +D +  +VGA    G +A+    W+ G
Sbjct: 125 PVLAARRAATQDLLREAVLVEGWRLH-----PGSDPVAAQVGAAMYTGAMAELAQQWLAG 179

Query: 177 DVELEPGQLVDQLASLL 193
            +  +   +VD    L+
Sbjct: 180 RLGDDLDTVVDYALRLV 196


>tr|A3PV60|A3PV60_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 199

 Score = 87.8 bits (216), Expect = 7e-16
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV  T+R A RR+                 A L VR +CR+ GL+ RYFYESF D D+
Sbjct: 7   WAGVPLTDRRAERRALLIDAALRLFGTGGE--AALAVRSVCRECGLNTRYFYESFADTDD 64

Query: 64  FIGGVFDWVVGDLATTIQAAVATVPPP--EQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +G ++D V   LA  + AA+        E+ RAG+A ++     D R GR+LF+   AN
Sbjct: 65  LLGALYDEVSAQLAADVDAAMTAAGSSLRERTRAGMAAVLGFSSADPRRGRVLFTDARAN 124

Query: 122 PVVVRKRTESSALF---AMLSGQHAGDALRIPANDRI--KVGAHFIVGGVAQTISAWIEG 176
           PV+  +R  +  L     ++ G         P +D +  +VGA    G +A+    W+ G
Sbjct: 125 PVLAARRAATQDLLREAVLVEGWRLH-----PGSDPVAAQVGAAMYTGAMAELAQQWLAG 179

Query: 177 DVELEPGQLVDQLASLL 193
            +  +   +VD    L+
Sbjct: 180 RLGDDLDAVVDYALRLV 196


>tr|A1UBI1|A1UBI1_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 199

 Score = 87.8 bits (216), Expect = 7e-16
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV  T+R A RR+                 A L VR +CR+ GL+ RYFYESF D D+
Sbjct: 7   WAGVPLTDRRAERRALLIDAALRLFGTGGE--AALAVRSVCRECGLNTRYFYESFADTDD 64

Query: 64  FIGGVFDWVVGDLATTIQAAVATVPPP--EQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +G ++D V   LA  + AA+        E+ RAG+A ++     D R GR+LF+   AN
Sbjct: 65  LLGALYDEVSAQLAADVDAAMTAAGSSLRERTRAGMAAVLGFSSADPRRGRVLFTDARAN 124

Query: 122 PVVVRKRTESSALF---AMLSGQHAGDALRIPANDRI--KVGAHFIVGGVAQTISAWIEG 176
           PV+  +R  +  L     ++ G         P +D +  +VGA    G +A+    W+ G
Sbjct: 125 PVLAARRAATQDLLREAVLVEGWRLH-----PGSDPVAAQVGAAMYTGAMAELAQQWLAG 179

Query: 177 DVELEPGQLVDQLASLL 193
            +  +   +VD    L+
Sbjct: 180 RLGDDLDTVVDYALRLV 196


>tr|A1T4H9|A1T4H9_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 206

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 14/180 (7%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV  T+R A RR+             D     L+VR + R+AGL+ RYFYESF D D+
Sbjct: 15  WAGVPLTDRRAERRA--LLVDAAFRLFGDGGEQALSVRSVSREAGLNTRYFYESFTDTDD 72

Query: 64  FIGGVFDWVVGDLATTIQAAV--ATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +G V+D V  +LA  ++AA+  A    P + RAG+  ++     D R GR+LF+   AN
Sbjct: 73  LLGAVYDRVSAELAEVVEAAMSGAGASLPARTRAGMTAVLHFSSADPRRGRVLFTDARAN 132

Query: 122 PVVVRKRTESSALF--AMLSGQHAGDALRI-PAND--RIKVGAHFIVGGVAQTISAWIEG 176
           PV+ ++R  +  L   A+L+     +  R+ P +D     VGA    G +A+    W+ G
Sbjct: 133 PVLTQRRAATQDLLREAVLT-----EGWRLHPDSDPTAAMVGAAMYTGAMAELAQQWLAG 187


>tr|B2HG14|B2HG14_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Possibly Acr-family);[Mycobacterium
           marinum]
          Length = 229

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ AT+R A RR+              +  A  TV  +C ++G+++RYFY+ F D+
Sbjct: 5   RVYGGLSATQRDAQRRA--LLIDAAVALMGKQGAAACTVTAVCTESGVTSRYFYQQFRDR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVA------TVPPPEQARAGIAEIVRTIVGDARIGRLLF 115
           D  +  +F      ++TT QA +       TV P E A A I  +V+ I  D  + R+LF
Sbjct: 63  DALLRAMFT----KISTTFQAVITKAIPDDTVAPQELAYAPIKALVQMIENDPSMARILF 118

Query: 116 STHLANPVVVRKRTESSALFAMLSGQHAGDALRIPAN--DRIKVGAHFIVGGVAQTISAW 173
               A P++ + R+E  + FA L  + A   L IP+       + A + VGG+ + +  W
Sbjct: 119 VESGAEPLLRQLRSELMSEFAELVLREARLHLDIPSEVIQVADLAATYGVGGLFEILRRW 178

Query: 174 IEGDVELEPGQLVDQLASLLDEL 196
           I+G + L    L++  A  L  L
Sbjct: 179 IDGQLNLSTEVLIEHCAGFLGSL 201


>tr|Q1B727|Q1B727_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 224

 Score = 84.3 bits (207), Expect = 8e-15
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ AT+R A RR                     TV  +C ++G+++RYFY+ F D+
Sbjct: 5   RVYGGLSATQRDAQRRVMLIDAAVSIMGT--HGATACTVTAVCAKSGVTSRYFYQQFRDR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVA------TVPPPEQARAGIAEIVRTIVGDARIGRLLF 115
           D  +  VF      ++TT QA +       TV P E A A I  +V+ I  D R+ R+LF
Sbjct: 63  DALLRAVF----AKISTTFQAVITSAIPDDTVAPQELAYAPIKALVQVIENDPRMARILF 118

Query: 116 STHLANPVVVRKRTESSALFAMLSGQHAGDALRIPAN--DRIKVGAHFIVGGVAQTISAW 173
               A P++ + R++    FA L  + A   L IP++      + A + VGG+ + +  W
Sbjct: 119 VESGAEPLLRQLRSDLMTDFAELVLREARLHLDIPSDVLQVADLAATYGVGGLFEILRRW 178

Query: 174 IEGDVELEPGQLVDQLASLL 193
           I+G + L    L++  A  L
Sbjct: 179 IDGQLNLSTEMLIEHCAGFL 198


>tr|A3Q1G1|A3Q1G1_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 224

 Score = 84.3 bits (207), Expect = 8e-15
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ AT+R A RR                     TV  +C ++G+++RYFY+ F D+
Sbjct: 5   RVYGGLSATQRDAQRRVMLIDAAVSIMGT--HGATACTVTAVCAKSGVTSRYFYQQFRDR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVA------TVPPPEQARAGIAEIVRTIVGDARIGRLLF 115
           D  +  VF      ++TT QA +       TV P E A A I  +V+ I  D R+ R+LF
Sbjct: 63  DALLRAVF----AKISTTFQAVITSAIPDDTVAPQELAYAPIKALVQVIENDPRMARILF 118

Query: 116 STHLANPVVVRKRTESSALFAMLSGQHAGDALRIPAN--DRIKVGAHFIVGGVAQTISAW 173
               A P++ + R++    FA L  + A   L IP++      + A + VGG+ + +  W
Sbjct: 119 VESGAEPLLRQLRSDLMTDFAELVLREARLHLDIPSDVLQVADLAATYGVGGLFEILRRW 178

Query: 174 IEGDVELEPGQLVDQLASLL 193
           I+G + L    L++  A  L
Sbjct: 179 IDGQLNLSTEMLIEHCAGFL 198


>tr|A1UHZ8|A1UHZ8_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 224

 Score = 84.3 bits (207), Expect = 8e-15
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ AT+R A RR                     TV  +C ++G+++RYFY+ F D+
Sbjct: 5   RVYGGLSATQRDAQRRVMLIDAAVSIMGT--HGATACTVTAVCAKSGVTSRYFYQQFRDR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVA------TVPPPEQARAGIAEIVRTIVGDARIGRLLF 115
           D  +  VF      ++TT QA +       TV P E A A I  +V+ I  D R+ R+LF
Sbjct: 63  DALLRAVF----AKISTTFQAVITSAIPDDTVAPQELAYAPIKALVQVIENDPRMARILF 118

Query: 116 STHLANPVVVRKRTESSALFAMLSGQHAGDALRIPAN--DRIKVGAHFIVGGVAQTISAW 173
               A P++ + R++    FA L  + A   L IP++      + A + VGG+ + +  W
Sbjct: 119 VESGAEPLLRQLRSDLMTDFAELVLREARLHLDIPSDVLQVADLAATYGVGGLFEILRRW 178

Query: 174 IEGDVELEPGQLVDQLASLL 193
           I+G + L    L++  A  L
Sbjct: 179 IDGQLNLSTEMLIEHCAGFL 198


>tr|Q5YU39|Q5YU39_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 230

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 7/185 (3%)

Query: 1   MRPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPD 60
           MR +RG+   +R+AARR+Q                +E+++RG+CRQAGL+ RYFYE+FP+
Sbjct: 12  MRTWRGLAPADRIAARRAQLIEAATELMATVGA--SEVSMRGVCRQAGLTERYFYENFPN 69

Query: 61  KDEFIGGVFDWVVGDLATTIQAAVATVPPPEQA--RAGIAEIVRTIVGDARIGRLLFSTH 118
            D  +  V + VV      +  A+   P    A     +A     ++ D R GR++F   
Sbjct: 70  LDALLTTVLETVVVAARDRLLEALTEAPLERDAMFEHVVATFTDFLLEDRRRGRIMFVES 129

Query: 119 LANPVVVRKRTESSALFAM-LSGQHAGDALRIPANDRI--KVGAHFIVGGVAQTISAWIE 175
            A PV+ ++  E  ALF   ++    G   R+P  D +   + A+ I G +A     W++
Sbjct: 130 QATPVLSKRGDELIALFTTPIAITIGGGDQRMPPPDHLDSMLNANAIFGALAYLYRPWLD 189

Query: 176 GDVEL 180
           G  E+
Sbjct: 190 GTFEV 194


>tr|Q82RJ2|Q82RJ2_STRAW Tax_Id=33903 SubName: Full=Putative
           TetR-family transcriptional regulator;[Streptomyces
           avermitilis]
          Length = 213

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 6/190 (3%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G +A +R   RR++                A  +V+ +C  AGL+ RYFYESF D+
Sbjct: 9   RRYGGRDAAQRQQERRTRLIQAGLDLFGTAG--YASASVKQVCSHAGLTERYFYESFRDR 66

Query: 62  DEFIGGVFDWVVGD-LATTIQAAVATVPPPE-QARAGIAEIVRTIVGDARIGRL-LFSTH 118
           ++ + GV+D ++   +A T QAA A  P  + Q RAG+   +RT+ GDAR  RL L    
Sbjct: 67  EDLLAGVYDELITTIIAETAQAAAAAAPDVDAQLRAGLEVFIRTLAGDARKARLVLIEVV 126

Query: 119 LANP-VVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGD 177
            A+P + VR+R       AM++      +    ++ R+ + A  +VGGV + +  W  G 
Sbjct: 127 GASPRLEVRRRDVLHEFAAMVAAVVGPLSDPEASSSRLAMTAMSLVGGVNELLVDWTLGH 186

Query: 178 VELEPGQLVD 187
            +    +L+D
Sbjct: 187 QKATVEELID 196


>tr|C3JRM4|C3JRM4_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, TetR family;[Rhodococcus erythropolis SK121]
          Length = 206

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 10/192 (5%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+   +R A RR               R  A +T   IC  A L+ RYFYESF  +
Sbjct: 7   RRYAGLSGEQRAALRRESLLAAGLDVFAAAGRQGATMTA--ICAHAKLTERYFYESFTSR 64

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATV--PPPEQARAGIAEIVRTIVGDARIGRLLFSTHL 119
           DE +  VFD +V ++     AA+ T      E+ R+ IA  V  +  D R GR+     +
Sbjct: 65  DELLQQVFDGIVDEVRVAGMAALRTTDGTREERVRSAIASFVNILTDDPRKGRVAMVESV 124

Query: 120 A-NPVVVRKRTESSALFAMLSGQHA---GDALRIPANDRIKVGAHFIVGGVAQTISAWIE 175
           A  P+   +R        M++ + A   GD    P     ++     VGG+A+ ++AW+ 
Sbjct: 125 AYEPLRTHRRGALRGFAQMVADEAALLYGDRAWPPHQG--EINGLLFVGGLAELVTAWLN 182

Query: 176 GDVELEPGQLVD 187
           G++++ P ++VD
Sbjct: 183 GEIDITPTEIVD 194


>tr|Q8GNL7|Q8GNL7_MYCAB Tax_Id=36809 (ORF R3c)SubName: Full=Putative
           transcriptional regulator;[Mycobacterium abscessus]
          Length = 224

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 6/196 (3%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R Y G+ AT+R A RR +                   TV  +C ++G+++RYFY+ F D+
Sbjct: 5   RVYGGLSATQRDAQRRVRLIDATVSIMGT--HGATACTVTAVCAKSGVTSRYFYQQFRDR 62

Query: 62  DEFIGGVFDWVVGDLATTIQAAVA--TVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHL 119
           D  +  VF  +       I +A+   TV P E A A I  +V+ I  D R+ R+LF    
Sbjct: 63  DALLRAVFAKISATFQAVITSAIPDDTVAPQELAYAPIKALVQLIENDPRMARILFVESG 122

Query: 120 ANPVVVRKRTESSALFAMLSGQHAGDALRIPAN--DRIKVGAHFIVGGVAQTISAWIEGD 177
           A  ++ + R+E    FA L  + A   L IP++      + A + VGG+ + +  WI+G 
Sbjct: 123 AESLLRQLRSELMTDFAELVLREARLHLDIPSDVLQVADLAATYGVGGLFEILRRWIDGQ 182

Query: 178 VELEPGQLVDQLASLL 193
           + L    L++  A  L
Sbjct: 183 LNLSTEMLIEHCAGFL 198


>tr|D0LDY8|D0LDY8_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis]
          Length = 196

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 6/192 (3%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           + GV   +R A RR+                ++ L+VR +CR  G ++RYFYESF D DE
Sbjct: 7   WAGVRMADRRAERRTALIRAAFDLFGTSG--VSALSVRSVCRACGFNSRYFYESFRDTDE 64

Query: 64  FIGGVFDWVVGDLATTI--QAAVATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +G V+D    +LA  I  Q +        + RAGI  ++     D R GR+LF+   AN
Sbjct: 65  LLGAVYDETAAELAVEIERQTSSGDGTVRSRTRAGIRGVLEFGSADPRRGRILFTEARAN 124

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVELE 181
           PV+ ++R ++  L   L+   A + L         V A    G +A+    W+ G++  +
Sbjct: 125 PVLAQRRAQTQDLLRELA--LAENRLHEADPMTSSVRAALFTGAMAELAQQWLAGNLGDD 182

Query: 182 PGQLVDQLASLL 193
              +VD    LL
Sbjct: 183 LDAVVDVALRLL 194


>tr|C7MXJ7|C7MXJ7_SACVD Tax_Id=471857 SubName: Full=Transcriptional
           regulator;[Saccharomonospora viridis]
          Length = 202

 Score = 81.3 bits (199), Expect = 7e-14
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)

Query: 2   RPYRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDK 61
           R + G   ++R A RR Q                + ++VR +CRQA L+ RYFYE+F  +
Sbjct: 6   RTWAGTTLSDRRATRRRQLLEAGLELLGTSGP--SAVSVRAVCRQAKLTERYFYENFTGR 63

Query: 62  DEFIGGVFDWVVGDLATTIQAAVATVPPP--EQARAGIAEIVRTIVGDARIGRLLFSTHL 119
           DEF+  V++ V       +  AV    P   ++A A ++  V  I+ D R GR+L  + L
Sbjct: 64  DEFVVAVYEHVAALAHQVLVDAVELAGPEIRDRAEAAVSVFVTLILDDPRKGRVLLLSPL 123

Query: 120 ANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGAHFIVGGVAQTISAWIEGDVE 179
           A+P ++R   +   +FA L  +   D  R+   DR  + A  +VGG+A    A++ G ++
Sbjct: 124 ADPALLRLGAQRLPMFAELVREQLSD--RVDEQDR-AMTATALVGGLANVFIAYLNGTLD 180

Query: 180 LEPGQLVDQLASLL 193
           +    L      L+
Sbjct: 181 VSRDHLTAHCVRLV 194


>tr|Q73V60|Q73V60_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 198

 Score = 80.9 bits (198), Expect = 9e-14
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 8/163 (4%)

Query: 36  AELTVRGICRQAGLSARYFYESFPDKDEFIGGVFDWVVGDLATTIQAAVATVPPPEQA-- 93
           A ++VR +CR+ GL+ RYFYESF D D+ +G V+D V   L   I AA+       +A  
Sbjct: 37  AAVSVRSVCRECGLNTRYFYESFRDTDDLLGAVYDRVSEQLEEVIAAAIEQAGDSLRART 96

Query: 94  RAGIAEIVRTIVGDARIGRLLFSTHLANPVVVRKRTESSALFAMLSGQHAGDALRI-PAN 152
           RAGIA ++     D R GR+LF+    NPV+  +R    A   ML      +  R+ P +
Sbjct: 97  RAGIAAVLGFSSADPRRGRVLFTDARTNPVLAARR---RATQDMLRQGVLSEGWRLNPRS 153

Query: 153 DRI--KVGAHFIVGGVAQTISAWIEGDVELEPGQLVDQLASLL 193
           D +  +V A    G +A+    W+ G +  +   +VD  + L+
Sbjct: 154 DPVAAEVAAAMYTGAMAELAQQWLAGHLGGDLDAVVDYASKLV 196


>tr|A1SMM8|A1SMM8_NOCSJ Tax_Id=196162 SubName: Full=Putative
           transcriptional regulator, TetR family;[Nocardioides
           sp.]
          Length = 203

 Score = 80.9 bits (198), Expect = 9e-14
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 9/192 (4%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           YRGV A ER+A RR++                   T+  IC +AGL+ RYFYESF + DE
Sbjct: 8   YRGVPAEERVAERRTRLMEATLAVWA---EPTTSTTMTRICAEAGLTERYFYESFRNLDE 64

Query: 64  FIGGVFDWVVGDLATTIQAA--VATVPPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
            +  V D +  ++     AA   A   P ++  A +   V  ++ D R GR+        
Sbjct: 65  ALTAVLDAIAVEIEERSAAASEAAGDEPTQRIVASMRAFVELLLEDPRKGRVAIIEAGTM 124

Query: 122 PVVVRKRTESSALFAMLSGQHAGD---ALRIPANDRIKVGAHFIVGGVAQTISAWIEGDV 178
           P +  +RTE    FA  S + A       R   +D    GA FI GG+A+ I  W+ G +
Sbjct: 125 PALRHRRTELLHHFASRSAEEARTLWAGSRRSEHDDEVAGALFI-GGMAELIGRWLTGSL 183

Query: 179 ELEPGQLVDQLA 190
           E  P ++VD  A
Sbjct: 184 EATPDEIVDAAA 195


>tr|A0QJQ4|A0QJQ4_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 198

 Score = 80.9 bits (198), Expect = 9e-14
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 8/163 (4%)

Query: 36  AELTVRGICRQAGLSARYFYESFPDKDEFIGGVFDWVVGDLATTIQAAVATVPPPEQA-- 93
           A ++VR +CR+ GL+ RYFYESF D D+ +G V+D V   L   I AA+       +A  
Sbjct: 37  AAVSVRSVCRECGLNTRYFYESFRDTDDLLGAVYDRVSEQLEEVIAAAIEQAGDSLRART 96

Query: 94  RAGIAEIVRTIVGDARIGRLLFSTHLANPVVVRKRTESSALFAMLSGQHAGDALRI-PAN 152
           RAGIA ++     D R GR+LF+    NPV+  +R    A   ML      +  R+ P +
Sbjct: 97  RAGIAAVLGFSSADPRRGRVLFTDARTNPVLAARR---RATQDMLRQGVLSEGWRLNPRS 153

Query: 153 DRI--KVGAHFIVGGVAQTISAWIEGDVELEPGQLVDQLASLL 193
           D +  +V A    G +A+    W+ G +  +   +VD  + L+
Sbjct: 154 DPVAAEVAAAMYTGAMAELAQQWLAGHLGGDLDAVVDYASKLV 196


>tr|Q5Z0Q9|Q5Z0Q9_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 215

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 6/191 (3%)

Query: 4   YRGVEATERLAARRSQXXXXXXXXXXXXDRDIAELTVRGICRQAGLSARYFYESFPDKDE 63
           YRG    ER   RR +               ++ LTVRG+C QA +  R+FYE+FPD D 
Sbjct: 9   YRGASTAERREDRRRRLLDAALDIVGT--NGLSALTVRGVCEQAKVGPRFFYEAFPDLDA 66

Query: 64  FIGGVFDWVVGDLATTIQAAVATV--PPPEQARAGIAEIVRTIVGDARIGRLLFSTHLAN 121
               +   V      + + A+A     P ++ RAG+A ++  +  D R   ++F+    +
Sbjct: 67  LAIALQLEVQNSALDSARTAIAVTAGTPAQRIRAGVAALITDLTDDPRRAHIVFAQAFGS 126

Query: 122 PVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKVGA--HFIVGGVAQTISAWIEGDVE 179
             ++R R  S    A    +     L +P      V A    I GG A+ +  W++G ++
Sbjct: 127 EALMRSRFASMRTVAATIIEQTRVVLDLPEGQDAAVAATSQLITGGAAELVLVWLDGGLD 186

Query: 180 LEPGQLVDQLA 190
           ++   L+D LA
Sbjct: 187 VDREGLIDLLA 197


>tr|A4T7F6|A4T7F6_MYCGI Tax_Id=350054 SubName: Full=Putative
           transcriptional regulator, TetR family;[Mycobacterium
           gilvum]
          Length = 193

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 38  LTVRGICRQAGLSARYFYESFPDKDEFIGGVFDWVVGDLATTIQAAVATVPPPEQARAGI 97
           LTVR +C+ AGL+ RYFYESF D+DE++  V+D    D+ T   AA+AT+   E  R  +
Sbjct: 42  LTVRAVCKAAGLTERYFYESFTDRDEYVAAVYD----DVCT---AAMATLRESESMRDAV 94

Query: 98  AEIVRTIVGDARIGRLLFSTHLANPVVVRKRTESSALFAMLSGQHAGDALRIPANDRIKV 157
              V  ++ D   GR+L     A PV+ R        F  L  QH  +  RI       +
Sbjct: 95  ERFVALMIDDPARGRVLLLAPEAEPVLARSGARWMPNFIELL-QH--NLTRITDTTTQAM 151

Query: 158 GAHFIVGGVAQTISAWIEGDVELEPGQLVDQLASLL 193
            A  ++G +    +A+++G +E    Q +D  A LL
Sbjct: 152 VATGLIGALTALFTAYLDGRLEATREQFIDHCAELL 187


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,407,236,535
Number of extensions: 50343084
Number of successful extensions: 129211
Number of sequences better than 10.0: 517
Number of HSP's gapped: 130546
Number of HSP's successfully gapped: 517
Length of query: 218
Length of database: 3,846,993,858
Length adjustment: 132
Effective length of query: 86
Effective length of database: 2,358,667,062
Effective search space: 202845367332
Effective search space used: 202845367332
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)