BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0786 (91 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HQS6|B2HQS6_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 64 4e-09 tr|A0PQJ1|A0PQJ1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 64 4e-09 tr|Q7U1Y0|Q7U1Y0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER... 37 0.71 tr|O53748|O53748_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSER... 37 0.71 tr|C6DT44|C6DT44_MYCTK Tax_Id=478434 SubName: Full=Conserved mem... 37 0.71 tr|C1AKE0|C1AKE0_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 37 0.71 tr|A5TZJ0|A5TZJ0_MYCTA Tax_Id=419947 SubName: Full=Putative cons... 37 0.71 tr|A1KFT6|A1KFT6_MYCBP Tax_Id=410289 SubName: Full=Probable cons... 37 0.71 tr|A5WJH4|A5WJH4_MYCTF Tax_Id=336982 SubName: Full=Conserved mem... 37 0.71 tr|A4KEF1|A4KEF1_MYCTU Tax_Id=395095 SubName: Full=Conserved mem... 37 0.71 tr|A2VFE8|A2VFE8_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 37 0.71 >tr|B2HQS6|B2HQS6_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 91 Score = 64.3 bits (155), Expect = 4e-09 Identities = 37/91 (40%), Positives = 37/91 (40%) Query: 1 MIRTEXXXXXXXXXXXXXXXWLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMR 60 MIRTE WLVAISIGDDLTTVGQWS MR Sbjct: 1 MIRTEAVLGGAGGVTAGYLLWLVAISIGDDLTTVGQWSLVILLLSGLLAVGAALVGLLMR 60 Query: 61 WRNRYGWSXXXXXXXXXXXXXXXXXXXDIYF 91 WRNRYGWS DIYF Sbjct: 61 WRNRYGWSAFVFGLPVLPVVLTLAVLADIYF 91 >tr|A0PQJ1|A0PQJ1_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 91 Score = 64.3 bits (155), Expect = 4e-09 Identities = 37/91 (40%), Positives = 37/91 (40%) Query: 1 MIRTEXXXXXXXXXXXXXXXWLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMR 60 MIRTE WLVAISIGDDLTTVGQWS MR Sbjct: 1 MIRTEAVLGGAGGVTAGYLLWLVAISIGDDLTTVGQWSLVILLLSGLLAVGAALVGLLMR 60 Query: 61 WRNRYGWSXXXXXXXXXXXXXXXXXXXDIYF 91 WRNRYGWS DIYF Sbjct: 61 WRNRYGWSAFVFGLPVLPVVLTLAVLADIYF 91 >tr|Q7U1Y0|Q7U1Y0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSERVED MEMBRANE PROTEIN;[Mycobacterium bovis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|O53748|O53748_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSERVED MEMBRANE PROTEIN; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|C6DT44|C6DT44_MYCTK Tax_Id=478434 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|C1AKE0|C1AKE0_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|A5TZJ0|A5TZJ0_MYCTA Tax_Id=419947 SubName: Full=Putative conserved membrane protein;[Mycobacterium tuberculosis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|A1KFT6|A1KFT6_MYCBP Tax_Id=410289 SubName: Full=Probable conserved membrane protein;[Mycobacterium bovis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|A5WJH4|A5WJH4_MYCTF Tax_Id=336982 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|A4KEF1|A4KEF1_MYCTU Tax_Id=395095 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 >tr|A2VFE8|A2VFE8_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 97 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/48 (37%), Positives = 21/48 (43%) Query: 21 WLVAISIGDDLTTVGQWSXXXXXXXXXXXXXXXXXXXXMRWRNRYGWS 68 WL AIS+GD LTTV QWS +R R + WS Sbjct: 27 WLAAISVGDGLTTVSQWSRVVLLLSVLVAVCGAAGGLRLRSRGKLAWS 74 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.327 0.139 0.513 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 241,674,391 Number of extensions: 3345079 Number of successful extensions: 2751 Number of sequences better than 10.0: 11 Number of HSP's gapped: 2749 Number of HSP's successfully gapped: 11 Length of query: 91 Length of database: 3,846,993,858 Length adjustment: 61 Effective length of query: 30 Effective length of database: 3,159,206,475 Effective search space: 94776194250 Effective search space used: 94776194250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 75 (33.5 bits)