BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0799 (138 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HQT9|B2HQT9_MYCMM Tax_Id=216594 SubName: Full=Transcription... 239 5e-62 tr|A0PVX9|A0PVX9_MYCUA Tax_Id=362242 SubName: Full=Transcription... 232 9e-60 sp|O53759|Y474_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized H... 206 9e-52 tr|Q7U1W9|Q7U1W9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 206 9e-52 tr|C6DT56|C6DT56_MYCTK Tax_Id=478434 SubName: Full=Transcription... 206 9e-52 tr|C1AKF2|C1AKF2_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 206 9e-52 tr|A5TZK2|A5TZK2_MYCTA Tax_Id=419947 SubName: Full=PbsX family t... 206 9e-52 tr|A1KFU8|A1KFU8_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 206 9e-52 tr|A5WJI6|A5WJI6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 206 9e-52 tr|A4KEG3|A4KEG3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 206 9e-52 tr|A2VFG0|A2VFG0_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 206 9e-52 tr|Q73SV6|Q73SV6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 190 5e-47 tr|A0QLL6|A0QLL6_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 190 5e-47 tr|Q6GVN9|Q6GVN9_MYCAV Tax_Id=1764 SubName: Full=Possible transc... 190 5e-47 tr|A1T395|A1T395_MYCVP Tax_Id=350058 SubName: Full=Transcription... 181 2e-44 tr|Q1BEC1|Q1BEC1_MYCSS Tax_Id=164756 SubName: Full=Transcription... 175 2e-42 tr|A3PU69|A3PU69_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 175 2e-42 tr|A1UAL3|A1UAL3_MYCSK Tax_Id=189918 SubName: Full=Transcription... 175 2e-42 tr|A4T304|A4T304_MYCGI Tax_Id=350054 SubName: Full=Transcription... 173 5e-42 tr|A0QQY3|A0QQY3_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 173 6e-42 tr|B1MID6|B1MID6_MYCA9 Tax_Id=561007 SubName: Full=Possible tran... 160 5e-38 tr|D0L2W4|D0L2W4_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-he... 153 7e-36 tr|C0ZUQ1|C0ZUQ1_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre ... 150 6e-35 tr|C3JIK7|C3JIK7_RHOER Tax_Id=596309 SubName: Full=Transcription... 150 6e-35 tr|Q0SEX4|Q0SEX4_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 149 7e-35 tr|C1AZE3|C1AZE3_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 149 7e-35 tr|C2AKJ6|C2AKJ6_TSUPA Tax_Id=521096 SubName: Full=Helix-turn-he... 149 1e-34 tr|Q5YP30|Q5YP30_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-b... 146 6e-34 tr|A4FQ27|A4FQ27_SACEN Tax_Id=405948 SubName: Full=Transcription... 140 4e-32 tr|C1WIX2|C1WIX2_9ACTO Tax_Id=479435 SubName: Full=Predicted tra... 134 2e-30 tr|D1A4M3|D1A4M3_THECU Tax_Id=471852 SubName: Full=Transcription... 134 4e-30 tr|B5H5F8|B5H5F8_STRPR Tax_Id=457429 SubName: Full=DNA-binding p... 133 6e-30 tr|C7MSW9|C7MSW9_SACVD Tax_Id=471857 SubName: Full=Helix-turn-he... 132 9e-30 tr|C6WPM0|C6WPM0_ACTMD Tax_Id=446462 SubName: Full=Transcription... 132 1e-29 tr|Q2JFU6|Q2JFU6_FRASC Tax_Id=106370 SubName: Full=Transcription... 131 2e-29 tr|Q9FCH1|Q9FCH1_STRCO Tax_Id=1902 SubName: Full=Putative DNA-bi... 130 4e-29 tr|B4VBR0|B4VBR0_9ACTO Tax_Id=465541 SubName: Full=DNA-binding p... 130 4e-29 tr|B5GP38|B5GP38_STRCL Tax_Id=443255 SubName: Full=DNA-binding p... 130 6e-29 tr|C9ZH07|C9ZH07_STRSW Tax_Id=680198 SubName: Full=Putative DNA-... 129 8e-29 tr|Q0RS43|Q0RS43_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-... 129 1e-28 tr|B1VS62|B1VS62_STRGG Tax_Id=455632 SubName: Full=Putative DNA-... 129 1e-28 tr|A8LDJ3|A8LDJ3_FRASN Tax_Id=298653 SubName: Full=Transcription... 129 1e-28 tr|C9N415|C9N415_9ACTO Tax_Id=591167 SubName: Full=Transcription... 128 2e-28 tr|B5HLS2|B5HLS2_9ACTO Tax_Id=463191 SubName: Full=DNA-binding p... 127 4e-28 tr|Q82G86|Q82G86_STRAW Tax_Id=33903 SubName: Full=Putative DNA-b... 127 5e-28 tr|A1SPG3|A1SPG3_NOCSJ Tax_Id=196162 SubName: Full=Helix-turn-he... 122 1e-26 tr|C4DK60|C4DK60_9ACTO Tax_Id=446470 SubName: Full=Predicted tra... 121 3e-26 tr|C4EIE0|C4EIE0_STRRS Tax_Id=479432 SubName: Full=Predicted tra... 120 4e-26 tr|A0LQY3|A0LQY3_ACIC1 Tax_Id=351607 SubName: Full=Transcription... 120 5e-26 tr|C8XA86|C8XA86_NAKMY Tax_Id=479431 SubName: Full=Transcription... 116 9e-25 >tr|B2HQT9|B2HQT9_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 138 Score = 239 bits (611), Expect = 5e-62 Identities = 127/138 (92%), Positives = 127/138 (92%) Query: 1 MPGEEKLGXXXXXXXXXXXDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 MPGEEKLG DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP Sbjct: 1 MPGEEKLGAKVSAVSSKASDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 Query: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT Sbjct: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 Query: 121 QQNEAVREECSSPSEIDD 138 QQNEAVREECSSPSEIDD Sbjct: 121 QQNEAVREECSSPSEIDD 138 >tr|A0PVX9|A0PVX9_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 138 Score = 232 bits (592), Expect = 9e-60 Identities = 125/138 (90%), Positives = 125/138 (90%) Query: 1 MPGEEKLGXXXXXXXXXXXDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 MPGEEKLG DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP Sbjct: 1 MPGEEKLGAKVSAVSSKASDIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKP 60 Query: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT Sbjct: 61 SADVLAQIAKALRVSAEVLYVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFT 120 Query: 121 QQNEAVREECSSPSEIDD 138 QQNEAV EE SSPSEIDD Sbjct: 121 QQNEAVCEEYSSPSEIDD 138 >sp|O53759|Y474_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv0474/MT0491;[Mycobacterium tuberculosis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|Q7U1W9|Q7U1W9_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|C6DT56|C6DT56_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|C1AKF2|C1AKF2_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|A5TZK2|A5TZK2_MYCTA Tax_Id=419947 SubName: Full=PbsX family transcriptional regulator;[Mycobacterium tuberculosis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|A1KFU8|A1KFU8_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium bovis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|A5WJI6|A5WJI6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|A4KEG3|A4KEG3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|A2VFG0|A2VFG0_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 140 Score = 206 bits (523), Expect = 9e-52 Identities = 109/120 (90%), Positives = 112/120 (93%), Gaps = 1/120 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE AHVSMRQLAERSGVSNPYLSQVERGLRKPSADVL+QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRETAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC-SSPSEIDD 138 YVRAGILEPSETSQVRD IITDTAITERQKQILLDIYASFT QNEA REEC S P+ DD Sbjct: 81 YVRAGILEPSETSQVRDAIITDTAITERQKQILLDIYASFTHQNEATREECPSDPTPTDD 140 >tr|Q73SV6|Q73SV6_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 138 Score = 190 bits (482), Expect = 5e-47 Identities = 99/111 (89%), Positives = 104/111 (93%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE+SGVSNPYLSQVERGLRKPSADVL QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRKPSADVLNQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC 130 YVRAGILEPS+ SQVRD I+TDTAITERQKQILLDIYASFTQQNEA EEC Sbjct: 81 YVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASFTQQNEATHEEC 131 >tr|A0QLL6|A0QLL6_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium avium] Length = 138 Score = 190 bits (482), Expect = 5e-47 Identities = 99/111 (89%), Positives = 104/111 (93%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE+SGVSNPYLSQVERGLRKPSADVL QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRKPSADVLNQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC 130 YVRAGILEPS+ SQVRD I+TDTAITERQKQILLDIYASFTQQNEA EEC Sbjct: 81 YVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASFTQQNEATHEEC 131 >tr|Q6GVN9|Q6GVN9_MYCAV Tax_Id=1764 SubName: Full=Possible transcriptional regulator;[Mycobacterium avium] Length = 138 Score = 190 bits (482), Expect = 5e-47 Identities = 99/111 (89%), Positives = 104/111 (93%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE+SGVSNPYLSQVERGLRKPSADVL QIAKALRVSAEVL Sbjct: 21 DIGSFIRSQRELAQVSVRQLAEKSGVSNPYLSQVERGLRKPSADVLNQIAKALRVSAEVL 80 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREEC 130 YVRAGILEPS+ SQVRD I+TDTAITERQKQILLDIYASFTQQNEA EEC Sbjct: 81 YVRAGILEPSDKSQVRDAIVTDTAITERQKQILLDIYASFTQQNEATHEEC 131 >tr|A1T395|A1T395_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium vanbaalenii] Length = 176 Score = 181 bits (459), Expect = 2e-44 Identities = 94/116 (81%), Positives = 103/116 (88%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 17 DIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSPSE 135 YVRAGILEPSET++VRD I+TDTAI ERQKQ+LLDIY SF QQNEAV E S +E Sbjct: 77 YVRAGILEPSETNEVRDAIVTDTAINERQKQVLLDIYTSFCQQNEAVLAEAVSATE 132 >tr|Q1BEC1|Q1BEC1_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 175 bits (443), Expect = 2e-42 Identities = 90/110 (81%), Positives = 98/110 (89%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 17 DIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREE 129 YVRAGILEPSE QVRD I++DTAITERQKQ+LLDIY SF QQNE E Sbjct: 77 YVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSE 126 >tr|A3PU69|A3PU69_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 175 bits (443), Expect = 2e-42 Identities = 90/110 (81%), Positives = 98/110 (89%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 17 DIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREE 129 YVRAGILEPSE QVRD I++DTAITERQKQ+LLDIY SF QQNE E Sbjct: 77 YVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSE 126 >tr|A1UAL3|A1UAL3_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 161 Score = 175 bits (443), Expect = 2e-42 Identities = 90/110 (81%), Positives = 98/110 (89%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 17 DIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREE 129 YVRAGILEPSE QVRD I++DTAITERQKQ+LLDIY SF QQNE E Sbjct: 77 YVRAGILEPSEAGQVRDAILSDTAITERQKQVLLDIYTSFCQQNEVAGSE 126 >tr|A4T304|A4T304_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium gilvum] Length = 182 Score = 173 bits (439), Expect = 5e-42 Identities = 88/117 (75%), Positives = 102/117 (87%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR+QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 20 DIGSFIRSQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 79 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSPSEI 136 Y++AGILEP +T++VRD IITD AI ERQKQ+LLDIY SF QQNEA E ++ E+ Sbjct: 80 YIQAGILEPGDTNEVRDAIITDMAINERQKQVLLDIYTSFCQQNEAALAEAAAADEM 136 >tr|A0QQY3|A0QQY3_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium smegmatis] Length = 142 Score = 173 bits (438), Expect = 6e-42 Identities = 89/109 (81%), Positives = 97/109 (88%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIGSFIR QRE A VS+RQLAE++GVSNPYLSQ+ERGLRKPSADVL QIAKALRVSAEVL Sbjct: 17 DIGSFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRKPSADVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVRE 128 YVRAGILEPSE S+VRD I+ D +ITERQKQ+LLDIY SF QQNEA E Sbjct: 77 YVRAGILEPSEPSEVRDAIVNDVSITERQKQVLLDIYTSFRQQNEAAGE 125 >tr|B1MID6|B1MID6_MYCA9 Tax_Id=561007 SubName: Full=Possible transcriptional regulator;[Mycobacterium abscessus] Length = 139 Score = 160 bits (404), Expect = 5e-38 Identities = 85/118 (72%), Positives = 98/118 (83%), Gaps = 1/118 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VS+RQLAE++GVSNPYLSQ+ERGLR+PSA+VL QIAKALRVSAEVL Sbjct: 17 DIGGFIRAQREAAQVSVRQLAEKAGVSNPYLSQIERGLRRPSAEVLNQIAKALRVSAEVL 76 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQN-EAVREECSSPSEI 136 YVRAGIL+ S+ S VRD II DT ITERQKQ+LLD+Y+SF QQN EA + S E+ Sbjct: 77 YVRAGILDRSDASPVRDAIIADTFITERQKQVLLDVYSSFVQQNAEAQSDVAESDLEL 134 >tr|D0L2W4|D0L2W4_GORB4 Tax_Id=526226 SubName: Full=Helix-turn-helix domain protein;[Gordonia bronchialis] Length = 141 Score = 153 bits (386), Expect = 7e-36 Identities = 80/109 (73%), Positives = 91/109 (83%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG+FIR+QR A VS+RQLAER+GVSNPYLSQ+ERGLRKPSADVLAQIAK LRVSAEVL Sbjct: 32 DIGAFIRSQRVAAEVSLRQLAERAGVSNPYLSQIERGLRKPSADVLAQIAKGLRVSAEVL 91 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVRE 128 YVRAGILE S VRD +I D +I ERQKQ+LL+IY SF ++N A E Sbjct: 92 YVRAGILEERPASPVRDALIADDSINERQKQMLLEIYDSFRKENAAADE 140 >tr|C0ZUQ1|C0ZUQ1_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus erythropolis] Length = 168 Score = 150 bits (378), Expect = 6e-35 Identities = 76/108 (70%), Positives = 90/108 (83%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VSMRQLA+ +GVSNPYLSQ+ERGLRKPSADVLAQIAK LRVS+EVL Sbjct: 36 DIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSADVLAQIAKGLRVSSEVL 95 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVR 127 YV+AG LE S +RD ++ +TAI ERQKQ+LL+IY SF ++NE+ R Sbjct: 96 YVQAGYLEQRPHSPIRDAVLAETAINERQKQVLLEIYDSFCRENESSR 143 >tr|C3JIK7|C3JIK7_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, XRE family;[Rhodococcus erythropolis SK121] Length = 168 Score = 150 bits (378), Expect = 6e-35 Identities = 76/108 (70%), Positives = 90/108 (83%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VSMRQLA+ +GVSNPYLSQ+ERGLRKPSADVLAQIAK LRVS+EVL Sbjct: 36 DIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSADVLAQIAKGLRVSSEVL 95 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVR 127 YV+AG LE S +RD ++ +TAI ERQKQ+LL+IY SF ++NE+ R Sbjct: 96 YVQAGYLEQRPHSPIRDAVLAETAINERQKQVLLEIYDSFCRENESSR 143 >tr|Q0SEX4|Q0SEX4_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator;[Rhodococcus sp.] Length = 168 Score = 149 bits (377), Expect = 7e-35 Identities = 77/117 (65%), Positives = 92/117 (78%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VSMRQLA+ +GVSNPYLSQ+ERGLRKPSA+VL QIAK LRVS+EVL Sbjct: 25 DIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSAEVLGQIAKGLRVSSEVL 84 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSPSEI 136 YV+AG LE +RD ++ DTAITERQKQ+LL+IY SF ++NE+ S SE+ Sbjct: 85 YVQAGYLEQRPHGPLRDALLADTAITERQKQVLLEIYESFCRENESAEAAESRTSEL 141 >tr|C1AZE3|C1AZE3_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 168 Score = 149 bits (377), Expect = 7e-35 Identities = 77/117 (65%), Positives = 92/117 (78%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VSMRQLA+ +GVSNPYLSQ+ERGLRKPSA+VL QIAK LRVS+EVL Sbjct: 25 DIGGFIRAQREAAQVSMRQLAQLAGVSNPYLSQIERGLRKPSAEVLGQIAKGLRVSSEVL 84 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSPSEI 136 YV+AG LE +RD ++ DTAITERQKQ+LL+IY SF ++NE+ S SE+ Sbjct: 85 YVQAGYLEQRPHGPLRDALLADTAITERQKQVLLEIYESFCRENESAEAAESRTSEL 141 >tr|C2AKJ6|C2AKJ6_TSUPA Tax_Id=521096 SubName: Full=Helix-turn-helix protein;[Tsukamurella paurometabola DSM 20162] Length = 128 Score = 149 bits (376), Expect = 1e-34 Identities = 77/109 (70%), Positives = 90/109 (82%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 +G FIR QR A VS+RQLAE++GVSNPYLSQ+ERGLR+PSADVL QIAKALR+SAEVLY Sbjct: 16 LGEFIRAQRIAAEVSIRQLAEKAGVSNPYLSQIERGLRRPSADVLGQIAKALRLSAEVLY 75 Query: 81 VRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAVREE 129 V+AGILE S VRD +I DTAITERQKQ LL+IY SF ++NE +E Sbjct: 76 VQAGILEERPESPVRDALIADTAITERQKQALLEIYESFRRENETALKE 124 >tr|Q5YP30|Q5YP30_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-binding protein;[Nocardia farcinica] Length = 136 Score = 146 bits (369), Expect = 6e-34 Identities = 75/104 (72%), Positives = 86/104 (82%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR QRE A VS+RQLA +GVSNPYLSQ+ERGLR PSA+VLAQIAKALRVS+EVL Sbjct: 16 DIGGFIRAQREAAQVSLRQLAALAGVSNPYLSQIERGLRNPSAEVLAQIAKALRVSSEVL 75 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAG LE VRD ++ DT+ITERQKQ+LLDIY SF ++N Sbjct: 76 YVRAGYLEQRPHGPVRDALLADTSITERQKQVLLDIYESFRREN 119 >tr|A4FQ27|A4FQ27_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator, XRE family;[Saccharopolyspora erythraea] Length = 148 Score = 140 bits (353), Expect = 4e-32 Identities = 69/103 (66%), Positives = 86/103 (83%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 D+G++IRTQR NA +S+RQLA+R+GVSNPYLSQVERGLRKPSA++L QIAKALR+SAE L Sbjct: 18 DLGAYIRTQRGNAQISLRQLAKRAGVSNPYLSQVERGLRKPSAEILQQIAKALRISAEAL 77 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQ 122 YV+AGILE E V D I+ D + ERQKQ+LLDIY +F ++ Sbjct: 78 YVQAGILERREGGPVVDAILADPDLNERQKQVLLDIYGTFRRE 120 >tr|C1WIX2|C1WIX2_9ACTO Tax_Id=479435 SubName: Full=Predicted transcriptional regulator;[Kribbella flavida DSM 17836] Length = 174 Score = 134 bits (338), Expect = 2e-30 Identities = 68/122 (55%), Positives = 93/122 (76%), Gaps = 8/122 (6%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 +G ++ QR +A +S+RQL++ +GVSNPYLSQ+ERGLRKPSADVL Q+AKALR+SAE LY Sbjct: 4 VGEYLAEQRRHAQLSLRQLSDLAGVSNPYLSQIERGLRKPSADVLQQLAKALRISAETLY 63 Query: 81 VRAGILEPSETSQ-------VRDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSP 133 VRAGIL+P + S V D I+ D A+TERQK++LLD+YASF ++N A ++ P Sbjct: 64 VRAGILDPDDGSDGAGRATGVTDAILLDPALTERQKRVLLDVYASFVREN-ATDDQPDDP 122 Query: 134 SE 135 ++ Sbjct: 123 AD 124 >tr|D1A4M3|D1A4M3_THECU Tax_Id=471852 SubName: Full=Transcriptional regulator, XRE family;[Thermomonospora curvata DSM 43183] Length = 145 Score = 134 bits (336), Expect = 4e-30 Identities = 68/106 (64%), Positives = 85/106 (80%), Gaps = 1/106 (0%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 IG +IR QR+ A +S+RQLA+ SG+SNPYLSQ+ERGLRKPSA++L QIAK LR+SAE LY Sbjct: 9 IGEYIREQRQRAKISLRQLADVSGISNPYLSQIERGLRKPSAEILQQIAKGLRISAEALY 68 Query: 81 VRAGILEPSET-SQVRDVIITDTAITERQKQILLDIYASFTQQNEA 125 V+AGILE E + V+ I D +TERQKQ+LLDIY SF ++NEA Sbjct: 69 VQAGILEDREADTDVQTAIRADLNLTERQKQVLLDIYESFRRENEA 114 >tr|B5H5F8|B5H5F8_STRPR Tax_Id=457429 SubName: Full=DNA-binding protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 151 Score = 133 bits (335), Expect = 6e-30 Identities = 66/106 (62%), Positives = 86/106 (81%), Gaps = 2/106 (1%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR NA +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 14 NLGEYLREQRRNAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 73 Query: 80 YVRAGILEPSETSQV--RDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ E ++ R VI+ D +I ERQKQ+LL IY SF ++N Sbjct: 74 YVRAGILDEQERDELETRAVILADPSINERQKQVLLQIYESFRKEN 119 >tr|C7MSW9|C7MSW9_SACVD Tax_Id=471857 SubName: Full=Helix-turn-helix protein;[Saccharomonospora viridis] Length = 156 Score = 132 bits (333), Expect = 9e-30 Identities = 63/107 (58%), Positives = 86/107 (80%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG++IR QR +A +S+RQL++ +GVSNPYLSQ+ERGLRKPSA++L QIAK LR+SAE L Sbjct: 36 DIGAYIRQQRNHAKISLRQLSKLAGVSNPYLSQIERGLRKPSAEILQQIAKGLRISAEAL 95 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEAV 126 YV+AGIL+ V D + D ++TERQKQ+LLD+Y SF ++N+ + Sbjct: 96 YVQAGILDRPVGGPVVDAVRADASLTERQKQVLLDVYESFLRENQGM 142 >tr|C6WPM0|C6WPM0_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, XRE family;[Actinosynnema mirum] Length = 128 Score = 132 bits (332), Expect = 1e-29 Identities = 64/105 (60%), Positives = 84/105 (80%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 IG +I+ QR +A +S+RQL++ +GVSNPYLSQ+ERGLRKPSA++L QIAK LR+SAE LY Sbjct: 16 IGDYIKEQRNSAKISLRQLSKLAGVSNPYLSQIERGLRKPSAEILQQIAKGLRISAEALY 75 Query: 81 VRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEA 125 V AGIL+ E + D I T + +TERQKQ+LLD+YASF ++N A Sbjct: 76 VEAGILQQREGGALADAITTASDLTERQKQVLLDVYASFRRENAA 120 >tr|Q2JFU6|Q2JFU6_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, XRE family;[Frankia sp.] Length = 325 Score = 131 bits (330), Expect = 2e-29 Identities = 63/105 (60%), Positives = 88/105 (83%), Gaps = 1/105 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 D+G FIR QR +A +S+RQLA+++GVSNPYLSQ+ERGLR+PSA++L QIAKALR+SAEVL Sbjct: 71 DLGDFIRDQRHSAQISLRQLAKQAGVSNPYLSQIERGLRRPSAEILQQIAKALRISAEVL 130 Query: 80 YVRAGILEPSETSQ-VRDVIITDTAITERQKQILLDIYASFTQQN 123 YV+AGILE + + V ++ D +++ERQKQ++LDIY +F ++N Sbjct: 131 YVQAGILEERQGEENVMAAVLADESLSERQKQVVLDIYEAFCREN 175 >tr|Q9FCH1|Q9FCH1_STRCO Tax_Id=1902 SubName: Full=Putative DNA-binding protein;[Streptomyces coelicolor] Length = 141 Score = 130 bits (328), Expect = 4e-29 Identities = 64/107 (59%), Positives = 85/107 (79%), Gaps = 3/107 (2%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR NA +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRNAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 67 Query: 80 YVRAGILEPS---ETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ E + R VI+ D ++ ERQKQ+LL +Y SF ++N Sbjct: 68 YVRAGILDAERDREDVETRAVILADPSLNERQKQVLLQVYESFRKEN 114 >tr|B4VBR0|B4VBR0_9ACTO Tax_Id=465541 SubName: Full=DNA-binding protein;[Streptomyces sp. Mg1] Length = 126 Score = 130 bits (328), Expect = 4e-29 Identities = 65/106 (61%), Positives = 85/106 (80%), Gaps = 2/106 (1%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR A +S+RQLAE +GVSNPYLSQ+ERGLRKPSAD+L Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRQAQLSLRQLAEAAGVSNPYLSQIERGLRKPSADILQQLAKALRISAETL 67 Query: 80 YVRAGILEPSETSQV--RDVIITDTAITERQKQILLDIYASFTQQN 123 YV+AGIL+ + +V R VI+ D +I ERQKQ+LL IY SF ++N Sbjct: 68 YVQAGILDERDPDEVETRAVILADPSINERQKQVLLQIYDSFRKEN 113 >tr|B5GP38|B5GP38_STRCL Tax_Id=443255 SubName: Full=DNA-binding protein;[Streptomyces clavuligerus ATCC 27064] Length = 202 Score = 130 bits (326), Expect = 6e-29 Identities = 68/117 (58%), Positives = 89/117 (76%), Gaps = 3/117 (2%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR A +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 14 NLGEYLREQRRTAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 73 Query: 80 YVRAGILEPSETSQV--RDVIITDTAITERQKQILLDIYASFTQQNEAVREECSSPS 134 YVRAGIL+ + ++ R VII D +I ERQK +LL IY SF ++N AV E P+ Sbjct: 74 YVRAGILDERDRDELETRAVIIADPSINERQKAVLLQIYDSFRKEN-AVEAEAGYPA 129 >tr|C9ZH07|C9ZH07_STRSW Tax_Id=680198 SubName: Full=Putative DNA-binding protein;[Streptomyces scabies] Length = 156 Score = 129 bits (325), Expect = 8e-29 Identities = 64/107 (59%), Positives = 84/107 (78%), Gaps = 3/107 (2%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR NA +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRNAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 67 Query: 80 YVRAGILEPS---ETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ + + R VI+ D + ERQKQ+LL IY SF ++N Sbjct: 68 YVRAGILDAERDRDEVETRAVILADPTLNERQKQVLLQIYESFRKEN 114 >tr|Q0RS43|Q0RS43_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-binding protein (Partial match);[Frankia alni] Length = 328 Score = 129 bits (324), Expect = 1e-28 Identities = 64/105 (60%), Positives = 85/105 (80%), Gaps = 1/105 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 D+G FIR QR A +S+RQLA+++GVSNPYLSQ+ERGLR+PSA++L QIAKALR+SAEVL Sbjct: 8 DLGDFIRDQRRAAQISLRQLAKQAGVSNPYLSQIERGLRRPSAEILQQIAKALRISAEVL 67 Query: 80 YVRAGILEPSETSQ-VRDVIITDTAITERQKQILLDIYASFTQQN 123 YV+AGILE + V I+ D +++ERQKQ++LDIY +F +N Sbjct: 68 YVQAGILEERHGGEDVMAAILADDSLSERQKQVVLDIYEAFCTEN 112 >tr|B1VS62|B1VS62_STRGG Tax_Id=455632 SubName: Full=Putative DNA-binding protein;[Streptomyces griseus subsp. griseus] Length = 162 Score = 129 bits (324), Expect = 1e-28 Identities = 65/106 (61%), Positives = 84/106 (79%), Gaps = 2/106 (1%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR A +S+RQLA+ +GVSNPYLSQ+ERGLRKPSADVL Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRAAQLSLRQLADATGVSNPYLSQIERGLRKPSADVLQQVAKALRISAETL 67 Query: 80 YVRAGILEPSETSQV--RDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ E ++ R VI+ D +I ERQK +LL IY SF ++N Sbjct: 68 YVRAGILDEREREELETRAVILADPSINERQKNVLLQIYDSFRREN 113 >tr|A8LDJ3|A8LDJ3_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, XRE family;[Frankia sp.] Length = 277 Score = 129 bits (323), Expect = 1e-28 Identities = 63/105 (60%), Positives = 84/105 (80%), Gaps = 1/105 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 D+G FIR QR A +S+RQLA ++GVSNPYLSQ+ERGLR+PSA++L QIAKALR+SAEVL Sbjct: 8 DVGDFIREQRRGAQISLRQLARQAGVSNPYLSQIERGLRRPSAEILQQIAKALRISAEVL 67 Query: 80 YVRAGILEPSETSQ-VRDVIITDTAITERQKQILLDIYASFTQQN 123 YV+AGILE E + + + D +TERQKQ+++DIY +F ++N Sbjct: 68 YVQAGILEEREGGEDLLAAVHADETLTERQKQVIVDIYDAFRREN 112 >tr|C9N415|C9N415_9ACTO Tax_Id=591167 SubName: Full=Transcriptional regulator, XRE family;[Streptomyces flavogriseus ATCC 33331] Length = 167 Score = 128 bits (322), Expect = 2e-28 Identities = 64/106 (60%), Positives = 84/106 (79%), Gaps = 2/106 (1%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR A +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRTAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 67 Query: 80 YVRAGILEPSETSQV--RDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ E ++ R VI+ D +I ERQK +LL IY SF ++N Sbjct: 68 YVRAGILDEREREELETRAVILADPSINERQKNVLLQIYDSFRREN 113 >tr|B5HLS2|B5HLS2_9ACTO Tax_Id=463191 SubName: Full=DNA-binding protein;[Streptomyces sviceus ATCC 29083] Length = 201 Score = 127 bits (319), Expect = 4e-28 Identities = 63/107 (58%), Positives = 83/107 (77%), Gaps = 3/107 (2%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR A +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 14 NLGDYLREQRRTAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 73 Query: 80 YVRAGILEPS---ETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ + + R VI+ D + ERQKQ+LL IY SF ++N Sbjct: 74 YVRAGILDAERDRDDVETRAVILADPTLNERQKQVLLQIYESFRKEN 120 >tr|Q82G86|Q82G86_STRAW Tax_Id=33903 SubName: Full=Putative DNA-binding protein;[Streptomyces avermitilis] Length = 158 Score = 127 bits (318), Expect = 5e-28 Identities = 62/107 (57%), Positives = 84/107 (78%), Gaps = 3/107 (2%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 ++G ++R QR +A +S+RQLA+ +GVSNPYLSQ+ERGLRKPSA+VL Q+AKALR+SAE L Sbjct: 8 NLGEYLREQRRSAQLSLRQLADAAGVSNPYLSQIERGLRKPSAEVLQQVAKALRISAETL 67 Query: 80 YVRAGILEPS---ETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL+ + + R V++ D + ERQKQ+LL IY SF ++N Sbjct: 68 YVRAGILDAERDRDEVETRAVLLADPTLNERQKQVLLQIYESFRKEN 114 >tr|A1SPG3|A1SPG3_NOCSJ Tax_Id=196162 SubName: Full=Helix-turn-helix domain protein;[Nocardioides sp.] Length = 128 Score = 122 bits (307), Expect = 1e-26 Identities = 63/107 (58%), Positives = 84/107 (78%), Gaps = 2/107 (1%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 +G +++ QR A +S+RQLA ++GVSNPYLSQ+ERGLR+PSA+VL QIAKALR+SAE LY Sbjct: 13 LGEYLKEQRVAAELSVRQLAAQAGVSNPYLSQIERGLRRPSAEVLQQIAKALRISAEQLY 72 Query: 81 VRAGILEPSETS--QVRDVIITDTAITERQKQILLDIYASFTQQNEA 125 +RAGI++P S V I+ D+ +TERQKQ LLD+Y+SF N+A Sbjct: 73 IRAGIVDPHAGSPGSVELAILGDSKLTERQKQSLLDVYSSFLALNKA 119 >tr|C4DK60|C4DK60_9ACTO Tax_Id=446470 SubName: Full=Predicted transcriptional regulator;[Stackebrandtia nassauensis DSM 44728] Length = 183 Score = 121 bits (303), Expect = 3e-26 Identities = 64/124 (51%), Positives = 85/124 (68%), Gaps = 5/124 (4%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 DIG FIR R NA VS+RQLA+++GVSNPYLSQ+ERGLRKPSA+VL QIA AL+VS ++ Sbjct: 5 DIGGFIRDLRRNAKVSLRQLADQAGVSNPYLSQIERGLRKPSAEVLQQIANALKVSTPLM 64 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEA-----VREECSSPS 134 Y+RAG+L+ + I D +T RQKQ L +IY +F ++N + +E S P+ Sbjct: 65 YLRAGLLKTKDGQGTLATIAGDPLLTARQKQTLTEIYEAFRRENARDAGLDLDDEASEPA 124 Query: 135 EIDD 138 DD Sbjct: 125 VTDD 128 >tr|C4EIE0|C4EIE0_STRRS Tax_Id=479432 SubName: Full=Predicted transcriptional regulator;[Streptosporangium roseum DSM 43021] Length = 175 Score = 120 bits (302), Expect = 4e-26 Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 1/106 (0%) Query: 21 IGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVLY 80 IG +IR QR +A +S+RQLA +GVSNPYLSQ+ERGLRKPSA++L QIAK L +S++ LY Sbjct: 9 IGEYIREQRTHAKISLRQLAAAAGVSNPYLSQIERGLRKPSAEILNQIAKGLHISSQALY 68 Query: 81 VRAGILEPSE-TSQVRDVIITDTAITERQKQILLDIYASFTQQNEA 125 V+AG++E E S V I D I+ERQ+Q+L+DIY SF ++N A Sbjct: 69 VQAGLIEEREPDSDVLTAIRADHLISERQRQVLIDIYESFRKENRA 114 >tr|A0LQY3|A0LQY3_ACIC1 Tax_Id=351607 SubName: Full=Transcriptional regulator, XRE family;[Acidothermus cellulolyticus] Length = 233 Score = 120 bits (301), Expect = 5e-26 Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 1/105 (0%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 +IG FIR QR A +S+RQLA +GVSNPYLSQVERGLR+PSA++L QIA+ LR+SAE L Sbjct: 12 NIGDFIREQRRLAQMSLRQLARIAGVSNPYLSQVERGLRRPSAEILQQIARGLRISAEAL 71 Query: 80 YVRAGIL-EPSETSQVRDVIITDTAITERQKQILLDIYASFTQQN 123 YVRAGIL E + V D ++ D + ERQKQ LL+IY +F ++N Sbjct: 72 YVRAGILDERTADGAVVDAVLADPHLLERQKQTLLEIYDAFRKEN 116 >tr|C8XA86|C8XA86_NAKMY Tax_Id=479431 SubName: Full=Transcriptional regulator, XRE family;[Nakamurella multipartita] Length = 162 Score = 116 bits (290), Expect = 9e-25 Identities = 57/106 (53%), Positives = 78/106 (73%) Query: 20 DIGSFIRTQRENAHVSMRQLAERSGVSNPYLSQVERGLRKPSADVLAQIAKALRVSAEVL 79 D+G FIR QR A +S+R LA ++GVSNPYLSQVERGLR+PSA++LA IA+ L +S E + Sbjct: 14 DLGEFIREQRLAAQISLRGLAAKAGVSNPYLSQVERGLRRPSAEILAHIAQGLSISVETM 73 Query: 80 YVRAGILEPSETSQVRDVIITDTAITERQKQILLDIYASFTQQNEA 125 +AGILE +E +V I D +TER K +L+DIYA+F ++ +A Sbjct: 74 LAKAGILEAAEAPEVLVAIRADPVLTERHKSVLVDIYAAFRKEAQA 119 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.313 0.129 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 769,162,507 Number of extensions: 23133115 Number of successful extensions: 78337 Number of sequences better than 10.0: 5368 Number of HSP's gapped: 79598 Number of HSP's successfully gapped: 5383 Length of query: 138 Length of database: 3,846,993,858 Length adjustment: 103 Effective length of query: 35 Effective length of database: 2,685,647,949 Effective search space: 93997678215 Effective search space used: 93997678215 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 75 (33.5 bits)