BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0877 (50 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HRM2|B2HRM2_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 86 1e-15 tr|A0PLS6|A0PLS6_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 86 1e-15 tr|A0QLF5|A0QLF5_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 76 1e-12 tr|Q8VKJ8|Q8VKJ8_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 72 3e-11 tr|A2VFL4|A2VFL4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 72 3e-11 tr|A1T3F9|A1T3F9_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 61 5e-08 tr|A3PUC4|A3PUC4_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 60 1e-07 tr|A1UAR8|A1UAR8_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 60 1e-07 tr|A0QR40|A0QR40_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 59 1e-07 tr|A4T366|A4T366_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 57 5e-07 tr|B1MHG4|B1MHG4_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 55 3e-06 tr|C6WNE3|C6WNE3_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 38 0.42 tr|C7QH47|C7QH47_CATAD Tax_Id=479433 SubName: Full=Putative unch... 35 2.1 tr|Q0RRZ5|Q0RRZ5_FRAAA Tax_Id=326424 SubName: Full=Putative unch... 35 2.7 tr|Q6AHC3|Q6AHC3_LEIXX Tax_Id=59736 SubName: Full=Membrane prote... 35 3.6 tr|A8LCC3|A8LCC3_FRASN Tax_Id=298653 SubName: Full=Putative unch... 34 6.1 tr|A1SE12|A1SE12_NOCSJ Tax_Id=196162 SubName: Full=Putative unch... 33 8.0 >tr|B2HRM2|B2HRM2_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 50 Score = 86.3 bits (212), Expect = 1e-15 Identities = 40/40 (100%), Positives = 40/40 (100%) Query: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ 50 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ Sbjct: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ 50 >tr|A0PLS6|A0PLS6_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 50 Score = 86.3 bits (212), Expect = 1e-15 Identities = 40/40 (100%), Positives = 40/40 (100%) Query: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ 50 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ Sbjct: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQGGQ 50 >tr|A0QLF5|A0QLF5_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 53 Score = 76.3 bits (186), Expect = 1e-12 Identities = 33/38 (86%), Positives = 37/38 (97%) Query: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQG 48 GTLIY+GWRAARSQA+RPKTRVIGPDDDP+FLR+LG G Sbjct: 11 GTLIYVGWRAARSQAARPKTRVIGPDDDPDFLRRLGHG 48 >tr|Q8VKJ8|Q8VKJ8_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 53 Score = 71.6 bits (174), Expect = 3e-11 Identities = 31/37 (83%), Positives = 35/37 (94%) Query: 12 TLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQG 48 TLIY+GWRAAR+Q +RPKTRVIGPDDDPEFLR+LG G Sbjct: 12 TLIYLGWRAARAQMNRPKTRVIGPDDDPEFLRRLGHG 48 >tr|A2VFL4|A2VFL4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 53 Score = 71.6 bits (174), Expect = 3e-11 Identities = 31/37 (83%), Positives = 35/37 (94%) Query: 12 TLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQG 48 TLIY+GWRAAR+Q +RPKTRVIGPDDDPEFLR+LG G Sbjct: 12 TLIYLGWRAARAQMNRPKTRVIGPDDDPEFLRRLGHG 48 >tr|A1T3F9|A1T3F9_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 59 Score = 60.8 bits (146), Expect = 5e-08 Identities = 24/33 (72%), Positives = 30/33 (90%) Query: 13 LIYIGWRAARSQASRPKTRVIGPDDDPEFLRKL 45 L+Y+GWR AR A+RP+TRVIGPDDDPEFLR++ Sbjct: 13 LVYVGWRVARMNANRPRTRVIGPDDDPEFLRRI 45 >tr|A3PUC4|A3PUC4_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 54 Score = 59.7 bits (143), Expect = 1e-07 Identities = 25/35 (71%), Positives = 30/35 (85%) Query: 13 LIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQ 47 L+YIGWR R A+RP+ RVIGPDDDP+FLR+LGQ Sbjct: 13 LVYIGWRLMRVSATRPQRRVIGPDDDPDFLRRLGQ 47 >tr|A1UAR8|A1UAR8_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 54 Score = 59.7 bits (143), Expect = 1e-07 Identities = 25/35 (71%), Positives = 30/35 (85%) Query: 13 LIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQ 47 L+YIGWR R A+RP+ RVIGPDDDP+FLR+LGQ Sbjct: 13 LVYIGWRLMRVSATRPQRRVIGPDDDPDFLRRLGQ 47 >tr|A0QR40|A0QR40_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 54 Score = 59.3 bits (142), Expect = 1e-07 Identities = 23/36 (63%), Positives = 31/36 (86%) Query: 13 LIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQG 48 L+Y+GWR +R+ + + +TRVIGPDDDP+FLRKLG G Sbjct: 13 LVYVGWRLSRAASEKSRTRVIGPDDDPDFLRKLGHG 48 >tr|A4T366|A4T366_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 54 Score = 57.4 bits (137), Expect = 5e-07 Identities = 22/33 (66%), Positives = 28/33 (84%) Query: 13 LIYIGWRAARSQASRPKTRVIGPDDDPEFLRKL 45 L+Y+GWR R A+RP+TR IGPDDDPEFLR++ Sbjct: 13 LVYVGWRVIRMNANRPRTRTIGPDDDPEFLRRI 45 >tr|B1MHG4|B1MHG4_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 53 Score = 55.1 bits (131), Expect = 3e-06 Identities = 22/37 (59%), Positives = 30/37 (81%) Query: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKLGQ 47 G L+Y GWR ++S +RP+TRV GPDDDPEFL ++G+ Sbjct: 11 GALVYAGWRISQSVPTRPQTRVTGPDDDPEFLWRIGK 47 >tr|C6WNE3|C6WNE3_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Actinosynnema mirum] Length = 60 Score = 37.7 bits (86), Expect = 0.42 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 6/40 (15%) Query: 12 TLIYIGWRAARSQASRPKT----RVIGPDDDPEFLRKLGQ 47 T+ + WRA S +RP++ R + PDDDPEFLRKLG+ Sbjct: 12 TIAVLLWRAFGS--ARPESVATRRFVAPDDDPEFLRKLGE 49 >tr|C7QH47|C7QH47_CATAD Tax_Id=479433 SubName: Full=Putative uncharacterized protein;[Catenulispora acidiphila] Length = 133 Score = 35.4 bits (80), Expect = 2.1 Identities = 14/22 (63%), Positives = 17/22 (77%) Query: 26 SRPKTRVIGPDDDPEFLRKLGQ 47 S P T + PDDDPEFLR+LG+ Sbjct: 103 SAPSTWTVAPDDDPEFLRQLGE 124 >tr|Q0RRZ5|Q0RRZ5_FRAAA Tax_Id=326424 SubName: Full=Putative uncharacterized protein;[Frankia alni] Length = 138 Score = 35.0 bits (79), Expect = 2.7 Identities = 16/30 (53%), Positives = 19/30 (63%) Query: 16 IGWRAARSQASRPKTRVIGPDDDPEFLRKL 45 +G +R RP R GPDDDPEFLR+L Sbjct: 93 LGRPGSRMGTRRPAVRPKGPDDDPEFLREL 122 >tr|Q6AHC3|Q6AHC3_LEIXX Tax_Id=59736 SubName: Full=Membrane protein;[Leifsonia xyli subsp. xyli] Length = 118 Score = 34.7 bits (78), Expect = 3.6 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Query: 11 GTLIYIGWRAARSQASRPKTRVIGPDDDPEFLRKL 45 G L ++ R SQA P RV+ PDDDPEFL KL Sbjct: 51 GLLWFVVGRRRLSQA--PGRRVVAPDDDPEFLGKL 83 >tr|A8LCC3|A8LCC3_FRASN Tax_Id=298653 SubName: Full=Putative uncharacterized protein;[Frankia sp.] Length = 139 Score = 33.9 bits (76), Expect = 6.1 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%) Query: 21 ARSQASRPKTRVIGPDDDPEFLRKLG---QGGQ 50 +R+ R R +GPDDDPEFLR+L +GG+ Sbjct: 100 SRTGMRRQAVRPVGPDDDPEFLRELADRIRGGE 132 >tr|A1SE12|A1SE12_NOCSJ Tax_Id=196162 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Nocardioides sp.] Length = 64 Score = 33.5 bits (75), Expect = 8.0 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Query: 12 TLIYIGWRAARSQASRPKT--RVIGPDDDPEFLRKL 45 T+ I R S RP+ RV+GPDDDP+FLR L Sbjct: 18 TVRVIQRRGIASPPRRPQAPPRVVGPDDDPDFLRDL 53 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.141 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 330,334,603 Number of extensions: 7220282 Number of successful extensions: 16587 Number of sequences better than 10.0: 17 Number of HSP's gapped: 16598 Number of HSP's successfully gapped: 17 Length of query: 50 Length of database: 3,846,993,858 Length adjustment: 23 Effective length of query: 27 Effective length of database: 3,587,664,189 Effective search space: 96866933103 Effective search space used: 96866933103 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 75 (33.5 bits)