BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_0972 (237 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HSH0|B2HSH0_MYCMM Tax_Id=216594 (nusG)RecName: Full=Transcr... 383 e-104 tr|A0PM06|A0PM06_MYCUA Tax_Id=362242 (nusG)RecName: Full=Transcr... 381 e-104 sp|P65589|NUSG_MYCTU Tax_Id=1773 (nusG)RecName: Full=Transcripti... 360 7e-98 sp|P65590|NUSG_MYCBO Tax_Id=1765 (nusG)RecName: Full=Transcripti... 360 7e-98 tr|C6DU18|C6DU18_MYCTK Tax_Id=478434 RecName: Full=Transcription... 360 7e-98 tr|C1AKX2|C1AKX2_MYCBT Tax_Id=561275 (nusG)RecName: Full=Transcr... 360 7e-98 tr|A5U024|A5U024_MYCTA Tax_Id=419947 (nusG)RecName: Full=Transcr... 360 7e-98 tr|A1KGB9|A1KGB9_MYCBP Tax_Id=410289 (nusG)RecName: Full=Transcr... 360 7e-98 tr|A5WK06|A5WK06_MYCTF Tax_Id=336982 RecName: Full=Transcription... 360 7e-98 tr|A4KEW7|A4KEW7_MYCTU Tax_Id=395095 RecName: Full=Transcription... 360 7e-98 tr|A2VFV8|A2VFV8_MYCTU Tax_Id=348776 RecName: Full=Transcription... 360 7e-98 tr|Q73SG3|Q73SG3_MYCPA Tax_Id=1770 (nusG)RecName: Full=Transcrip... 342 2e-92 tr|A0QL68|A0QL68_MYCA1 Tax_Id=243243 (nusG)RecName: Full=Transcr... 342 2e-92 sp|Q9CBK0|NUSG_MYCLE Tax_Id=1769 (nusG)RecName: Full=Transcripti... 323 1e-86 tr|B8ZSD7|B8ZSD7_MYCLB Tax_Id=561304 (nusG)RecName: Full=Transcr... 323 1e-86 tr|A1T4G9|A1T4G9_MYCVP Tax_Id=350058 RecName: Full=Transcription... 319 2e-85 tr|A4T1M3|A4T1M3_MYCGI Tax_Id=350054 RecName: Full=Transcription... 317 5e-85 tr|Q1BDJ7|Q1BDJ7_MYCSS Tax_Id=164756 RecName: Full=Transcription... 315 3e-84 tr|A1UBE5|A1UBE5_MYCSK Tax_Id=189918 RecName: Full=Transcription... 315 3e-84 tr|A0QS44|A0QS44_MYCS2 Tax_Id=246196 RecName: Full=Transcription... 314 5e-84 tr|A3PV32|A3PV32_MYCSJ Tax_Id=164757 RecName: Full=Transcription... 313 8e-84 tr|Q0SF95|Q0SF95_RHOSR Tax_Id=101510 RecName: Full=Transcription... 310 9e-83 tr|B1MH87|B1MH87_MYCA9 Tax_Id=561007 RecName: Full=Transcription... 309 1e-82 tr|C1AYX7|C1AYX7_RHOOB Tax_Id=632772 (nusG)RecName: Full=Transcr... 307 7e-82 tr|C0ZV29|C0ZV29_RHOE4 Tax_Id=234621 (nusG)RecName: Full=Transcr... 304 6e-81 tr|C3JJT1|C3JJT1_RHOER Tax_Id=596309 RecName: Full=Transcription... 304 6e-81 tr|Q5YPC3|Q5YPC3_NOCFA Tax_Id=37329 (nusG)RecName: Full=Transcri... 298 4e-79 tr|C2ALA5|C2ALA5_TSUPA Tax_Id=521096 RecName: Full=Transcription... 298 4e-79 tr|A4FPR1|A4FPR1_SACEN Tax_Id=405948 (nusG)RecName: Full=Transcr... 288 3e-76 tr|D0L4W7|D0L4W7_GORB4 Tax_Id=526226 SubName: Full=Transcription... 288 5e-76 tr|C6WN74|C6WN74_ACTMD Tax_Id=446462 RecName: Full=Transcription... 285 4e-75 tr|C7MTH0|C7MTH0_SACVD Tax_Id=471857 RecName: Full=Transcription... 282 2e-74 tr|C0U8J5|C0U8J5_9ACTO Tax_Id=526225 RecName: Full=Transcription... 275 2e-72 tr|C8XBG0|C8XBG0_NAKMY Tax_Id=479431 SubName: Full=NusG antiterm... 273 9e-72 tr|Q47LI0|Q47LI0_THEFY Tax_Id=269800 RecName: Full=Transcription... 263 2e-68 tr|D1A3B3|D1A3B3_THECU Tax_Id=471852 SubName: Full=NusG antiterm... 262 3e-68 tr|C4ECQ8|C4ECQ8_STRRS Tax_Id=479432 RecName: Full=Transcription... 258 5e-67 tr|D1BCA3|D1BCA3_9MICO Tax_Id=446469 SubName: Full=Transcription... 251 5e-65 tr|D1BWR8|D1BWR8_9MICO Tax_Id=446471 SubName: Full=NusG antiterm... 247 9e-64 tr|C1YIW7|C1YIW7_NOCDA Tax_Id=446468 RecName: Full=Transcription... 244 4e-63 tr|A8LC69|A8LC69_FRASN Tax_Id=298653 RecName: Full=Transcription... 242 2e-62 tr|C4RBQ4|C4RBQ4_9ACTO Tax_Id=219305 RecName: Full=Transcription... 242 2e-62 tr|Q0RRT7|Q0RRT7_FRAAA Tax_Id=326424 (nusG)RecName: Full=Transcr... 241 4e-62 tr|A4XBR1|A4XBR1_SALTO Tax_Id=369723 RecName: Full=Transcription... 241 4e-62 tr|A3TH76|A3TH76_9MICO Tax_Id=313589 RecName: Full=Transcription... 241 4e-62 tr|Q2JFJ0|Q2JFJ0_FRASC Tax_Id=106370 RecName: Full=Transcription... 241 5e-62 tr|A8M544|A8M544_SALAI Tax_Id=391037 RecName: Full=Transcription... 241 5e-62 tr|C1RPX5|C1RPX5_9CELL Tax_Id=446466 RecName: Full=Transcription... 241 6e-62 tr|C4DUT2|C4DUT2_9ACTO Tax_Id=446470 RecName: Full=Transcription... 240 8e-62 tr|A6W5S5|A6W5S5_KINRD Tax_Id=266940 RecName: Full=Transcription... 239 2e-61 >tr|B2HSH0|B2HSH0_MYCMM Tax_Id=216594 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium marinum] Length = 237 Score = 383 bits (983), Expect = e-104 Identities = 200/237 (84%), Positives = 201/237 (84%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDLQEPGI LKAELRSKPGEWYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLQEPGIPADVEVPAEEVDPAVALKAELRSKPGEWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXXXXXXXXXXXXXXXXXXLERPVL 180 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR LERPVL Sbjct: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRGAAKKTAKAASTAAVAEAGGLERPVL 180 Query: 181 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI Sbjct: 181 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 >tr|A0PM06|A0PM06_MYCUA Tax_Id=362242 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium ulcerans] Length = 237 Score = 381 bits (978), Expect = e-104 Identities = 199/237 (83%), Positives = 200/237 (84%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGD SAGEAVDLQEPGI LKAELRSKPGEWYVVHSYAGYEN Sbjct: 1 MTTFDGDASAGEAVDLQEPGIPADVEVPAEEVDPAVALKAELRSKPGEWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXXXXXXXXXXXXXXXXXXLERPVL 180 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR LERPVL Sbjct: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRGAAKKTAKAASTAAVAEAGGLERPVL 180 Query: 181 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI Sbjct: 181 EVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 >sp|P65589|NUSG_MYCTU Tax_Id=1773 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >sp|P65590|NUSG_MYCBO Tax_Id=1765 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|C6DU18|C6DU18_MYCTK Tax_Id=478434 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|C1AKX2|C1AKX2_MYCBT Tax_Id=561275 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|A5U024|A5U024_MYCTA Tax_Id=419947 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|A1KGB9|A1KGB9_MYCBP Tax_Id=410289 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium bovis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|A5WK06|A5WK06_MYCTF Tax_Id=336982 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|A4KEW7|A4KEW7_MYCTU Tax_Id=395095 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis str. Haarlem] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|A2VFV8|A2VFV8_MYCTU Tax_Id=348776 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium tuberculosis C] Length = 238 Score = 360 bits (924), Expect = 7e-98 Identities = 191/238 (80%), Positives = 195/238 (81%), Gaps = 1/238 (0%) Query: 1 VTTFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYEN 60 +TTFDGDTSAGEAVDL E LKAELRSKPG+WYVVHSYAGYEN Sbjct: 1 MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYEN 60 Query: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW Sbjct: 61 KVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSW 120 Query: 121 AAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXXXXXXXXXXXXXXXLERPV 179 AAVRNTPGVTGFVGATSRPSAL LDDVVKFLLPR LERPV Sbjct: 121 AAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPV 180 Query: 180 LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 +EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKVLVSIFGRETPVELTF QVSKI Sbjct: 181 VEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI 238 >tr|Q73SG3|Q73SG3_MYCPA Tax_Id=1770 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium paratuberculosis] Length = 256 Score = 342 bits (878), Expect = 2e-92 Identities = 185/256 (72%), Positives = 195/256 (76%), Gaps = 19/256 (7%) Query: 1 VTTFDGDTSAGEAVDLQEPG------------------IXXXXXXXXXXXXXXXXLKAEL 42 +TTFDGD SAG+AVDL+E LKAEL Sbjct: 1 MTTFDGDPSAGDAVDLRETDEATEAADEAAETTEDAAESAETQGEPAEEVDPAAALKAEL 60 Query: 43 RSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR 102 RSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR Sbjct: 61 RSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR 120 Query: 103 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXX 161 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL+LDDVVKFLLPR Sbjct: 121 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALSLDDVVKFLLPRGATKKVAK 180 Query: 162 XXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIF 221 LERP +EVDYEVGESVTVMDGPFATLPATI+EVN EQQKLKVLVSIF Sbjct: 181 GAASTAAAAEAGGLERPAIEVDYEVGESVTVMDGPFATLPATISEVNGEQQKLKVLVSIF 240 Query: 222 GRETPVELTFNQVSKI 237 GRETPVELTF+QVSK+ Sbjct: 241 GRETPVELTFSQVSKL 256 >tr|A0QL68|A0QL68_MYCA1 Tax_Id=243243 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium avium] Length = 256 Score = 342 bits (878), Expect = 2e-92 Identities = 185/256 (72%), Positives = 195/256 (76%), Gaps = 19/256 (7%) Query: 1 VTTFDGDTSAGEAVDLQEPG------------------IXXXXXXXXXXXXXXXXLKAEL 42 +TTFDGD SAG+AVDL+E LKAEL Sbjct: 1 MTTFDGDPSAGDAVDLRETDEATEAADEAAETTEDAAESAETQGEPAEEVDPAAALKAEL 60 Query: 43 RSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR 102 RSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR Sbjct: 61 RSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNR 120 Query: 103 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XXXXXXX 161 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL+LDDVVKFLLPR Sbjct: 121 KVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALSLDDVVKFLLPRGATKKVAK 180 Query: 162 XXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIF 221 LERP +EVDYEVGESVTVMDGPFATLPATI+EVN EQQKLKVLVSIF Sbjct: 181 GAASTAAAAEAGGLERPAIEVDYEVGESVTVMDGPFATLPATISEVNGEQQKLKVLVSIF 240 Query: 222 GRETPVELTFNQVSKI 237 GRETPVELTF+QVSK+ Sbjct: 241 GRETPVELTFSQVSKL 256 >sp|Q9CBK0|NUSG_MYCLE Tax_Id=1769 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium leprae] Length = 228 Score = 323 bits (828), Expect = 1e-86 Identities = 168/201 (83%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKAELRSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XX 156 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL LDDVVKFLLP Sbjct: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 Query: 157 XXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 LER ++EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKV Sbjct: 148 KKDAKGAVSTAAAAEAGGLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 Query: 217 LVSIFGRETPVELTFNQVSKI 237 LVSIFGRETPVELTF+QVSKI Sbjct: 208 LVSIFGRETPVELTFSQVSKI 228 >tr|B8ZSD7|B8ZSD7_MYCLB Tax_Id=561304 (nusG)RecName: Full=Transcription antitermination protein nusG;[Mycobacterium leprae] Length = 228 Score = 323 bits (828), Expect = 1e-86 Identities = 168/201 (83%), Positives = 175/201 (87%), Gaps = 1/201 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKAELRSKPG+WYV+HSYAGYENKVKANLETRVQNLDVGD IFQVEVPTEEVTEIKNGQR Sbjct: 28 LKAELRSKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDCIFQVEVPTEEVTEIKNGQR 87 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR-XX 156 + VNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSAL LDDVVKFLLP Sbjct: 88 RLVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPSGSA 147 Query: 157 XXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 LER ++EVDYEVGESVTVMDGPFATLPATI+EVNAEQQKLKV Sbjct: 148 KKDAKGAVSTAAAAEAGGLERSIIEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKV 207 Query: 217 LVSIFGRETPVELTFNQVSKI 237 LVSIFGRETPVELTF+QVSKI Sbjct: 208 LVSIFGRETPVELTFSQVSKI 228 >tr|A1T4G9|A1T4G9_MYCVP Tax_Id=350058 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium vanbaalenii] Length = 266 Score = 319 bits (817), Expect = 2e-85 Identities = 164/203 (80%), Positives = 174/203 (85%), Gaps = 3/203 (1%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR KPGEWYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 64 LKMELRLKPGEWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 123 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP---R 154 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP Sbjct: 124 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 183 Query: 155 XXXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKL 214 +ERPV+EVD+EVGESVTVMDGPFATLPA+I+EVNAEQQKL Sbjct: 184 KKPGKAATSAAAAASSEAGGIERPVIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKL 243 Query: 215 KVLVSIFGRETPVELTFNQVSKI 237 KVLVSIFGRETPVELTFNQV+KI Sbjct: 244 KVLVSIFGRETPVELTFNQVAKI 266 >tr|A4T1M3|A4T1M3_MYCGI Tax_Id=350054 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium gilvum] Length = 272 Score = 317 bits (813), Expect = 5e-85 Identities = 163/201 (81%), Positives = 173/201 (86%), Gaps = 1/201 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR KPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 72 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 131 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLL-PRXX 156 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLL P Sbjct: 132 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 191 Query: 157 XXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 ERPV+EVD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLKV Sbjct: 192 KKPGKATAASTAAAEVGATERPVIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 251 Query: 217 LVSIFGRETPVELTFNQVSKI 237 LVSIFGRETPVELTFNQV+KI Sbjct: 252 LVSIFGRETPVELTFNQVAKI 272 >tr|Q1BDJ7|Q1BDJ7_MYCSS Tax_Id=164756 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 270 Score = 315 bits (806), Expect = 3e-84 Identities = 163/202 (80%), Positives = 172/202 (85%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR KPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 69 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 128 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP--RX 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP Sbjct: 129 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 188 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 LERP + VD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLK Sbjct: 189 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 248 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVELTFNQVSKI Sbjct: 249 VLVSIFGRETPVELTFNQVSKI 270 >tr|A1UBE5|A1UBE5_MYCSK Tax_Id=189918 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 270 Score = 315 bits (806), Expect = 3e-84 Identities = 163/202 (80%), Positives = 172/202 (85%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR KPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 69 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 128 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP--RX 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP Sbjct: 129 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 188 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 LERP + VD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLK Sbjct: 189 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 248 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVELTFNQVSKI Sbjct: 249 VLVSIFGRETPVELTFNQVSKI 270 >tr|A0QS44|A0QS44_MYCS2 Tax_Id=246196 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium smegmatis] Length = 280 Score = 314 bits (805), Expect = 5e-84 Identities = 162/202 (80%), Positives = 173/202 (85%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR KPG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 79 LKKELRLKPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 138 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR--X 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP+ Sbjct: 139 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPQGAA 198 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 LERP + VD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLK Sbjct: 199 KKPGKAAAAAASAASTEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 258 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVELTFNQV+KI Sbjct: 259 VLVSIFGRETPVELTFNQVAKI 280 >tr|A3PV32|A3PV32_MYCSJ Tax_Id=164757 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium sp.] Length = 271 Score = 313 bits (803), Expect = 8e-84 Identities = 162/202 (80%), Positives = 172/202 (85%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LK ELR +PG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 70 LKKELRLRPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 129 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP--RX 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP Sbjct: 130 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPPAAA 189 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 LERP + VD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLK Sbjct: 190 KKPGKAASTAAGAASSEATLERPEILVDFEVGESVTVMDGPFATLPASISEVNAEQQKLK 249 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVELTFNQVSKI Sbjct: 250 VLVSIFGRETPVELTFNQVSKI 271 >tr|Q0SF95|Q0SF95_RHOSR Tax_Id=101510 RecName: Full=Transcription antitermination protein nusG;[Rhodococcus sp.] Length = 264 Score = 310 bits (794), Expect = 9e-83 Identities = 165/236 (69%), Positives = 181/236 (76%), Gaps = 13/236 (5%) Query: 3 TFDGDTSAGEAVDLQEPGIXXXXXXXXXXXXXXXXLKAELRSKPGEWYVVHSYAGYENKV 62 T D SA EAV +EP LKA LR PG+WYV+HSYAGYENKV Sbjct: 41 TADEAVSADEAVTAEEP------------EDPVAELKAALRRAPGDWYVIHSYAGYENKV 88 Query: 63 KANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAA 122 KANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDL D+SW A Sbjct: 89 KANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLNDESWGA 148 Query: 123 VRNTPGVTGFVGATSRPSALTLDDVVKFLLP-RXXXXXXXXXXXXXXXXXXXXLERPVLE 181 VRNTPGVTGFVGATSRPS LTL++V+KFLLP + +P++E Sbjct: 149 VRNTPGVTGFVGATSRPSPLTLNEVIKFLLPQQEQKKQAAAATVSAGETGGESFAKPLIE 208 Query: 182 VDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIFGRETPVELTFNQVSKI 237 VD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLKVLVSIFGRETPVEL+F QV+KI Sbjct: 209 VDFEVGESVTVMDGPFATLPASISEVNAEQQKLKVLVSIFGRETPVELSFTQVAKI 264 >tr|B1MH87|B1MH87_MYCA9 Tax_Id=561007 RecName: Full=Transcription antitermination protein nusG;[Mycobacterium abscessus] Length = 264 Score = 309 bits (792), Expect = 1e-82 Identities = 157/205 (76%), Positives = 172/205 (83%), Gaps = 5/205 (2%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKA+LR +PGEWYV+HSYAGYENKVKANL+TRVQNLDVGDYIFQ+EVPTEEVTEIKNGQR Sbjct: 60 LKAQLRREPGEWYVIHSYAGYENKVKANLQTRVQNLDVGDYIFQIEVPTEEVTEIKNGQR 119 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP---- 153 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L+LDDVVKFLLP Sbjct: 120 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSLDDVVKFLLPQAPA 179 Query: 154 -RXXXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQ 212 + LERPV+EVD+EVGESVTV DGPFATLPA+I+EVNAEQQ Sbjct: 180 KKPAKGAASADAATASSSEPGGLERPVIEVDFEVGESVTVTDGPFATLPASISEVNAEQQ 239 Query: 213 KLKVLVSIFGRETPVELTFNQVSKI 237 +LKVLVSIFGRETPVEL F QV K+ Sbjct: 240 RLKVLVSIFGRETPVELNFTQVEKL 264 >tr|C1AYX7|C1AYX7_RHOOB Tax_Id=632772 (nusG)RecName: Full=Transcription antitermination protein nusG;[Rhodococcus opacus] Length = 288 Score = 307 bits (786), Expect = 7e-82 Identities = 156/201 (77%), Positives = 171/201 (85%), Gaps = 1/201 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKA LR PG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 88 LKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 147 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP-RXX 156 KQVNRKVLPGYILVRMDL D+SW AVRNTPGVTGFVGATSRPS LTL++V+KFLLP + Sbjct: 148 KQVNRKVLPGYILVRMDLNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVIKFLLPQQEQ 207 Query: 157 XXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 +P++EVD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLKV Sbjct: 208 KKQAAAATVSAGETGGETFAKPLIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 267 Query: 217 LVSIFGRETPVELTFNQVSKI 237 LVSIFGRETPVEL+F QV+KI Sbjct: 268 LVSIFGRETPVELSFTQVAKI 288 >tr|C0ZV29|C0ZV29_RHOE4 Tax_Id=234621 (nusG)RecName: Full=Transcription antitermination protein nusG;[Rhodococcus erythropolis] Length = 278 Score = 304 bits (778), Expect = 6e-81 Identities = 155/202 (76%), Positives = 169/202 (83%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKA LR PG+WYV+HSYAGYENKVK NLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 77 LKAALRRAPGDWYVIHSYAGYENKVKTNLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 136 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR--X 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS LTL++VVKFLLP+ Sbjct: 137 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVVKFLLPQQEQ 196 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 +P++EVD+EVGESVTVMDGPFATLPA+I+EVN EQQKLK Sbjct: 197 KKQQAAAAAVAAGEAPSESFGKPLIEVDFEVGESVTVMDGPFATLPASISEVNGEQQKLK 256 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVEL FNQV+KI Sbjct: 257 VLVSIFGRETPVELNFNQVAKI 278 >tr|C3JJT1|C3JJT1_RHOER Tax_Id=596309 RecName: Full=Transcription antitermination protein nusG;[Rhodococcus erythropolis SK121] Length = 278 Score = 304 bits (778), Expect = 6e-81 Identities = 155/202 (76%), Positives = 169/202 (83%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKA LR PG+WYV+HSYAGYENKVK NLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR Sbjct: 77 LKAALRRAPGDWYVIHSYAGYENKVKTNLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 136 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR--X 155 KQVNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS LTL++VVKFLLP+ Sbjct: 137 KQVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLTLNEVVKFLLPQQEQ 196 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 +P++EVD+EVGESVTVMDGPFATLPA+I+EVN EQQKLK Sbjct: 197 KKQQAAAAAVAAGEAPSESFGKPLIEVDFEVGESVTVMDGPFATLPASISEVNGEQQKLK 256 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVEL FNQV+KI Sbjct: 257 VLVSIFGRETPVELNFNQVAKI 278 >tr|Q5YPC3|Q5YPC3_NOCFA Tax_Id=37329 (nusG)RecName: Full=Transcription antitermination protein nusG;[Nocardia farcinica] Length = 273 Score = 298 bits (762), Expect = 4e-79 Identities = 151/201 (75%), Positives = 167/201 (83%), Gaps = 1/201 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 +KA LR PG+WYV+HSYAGYENKVKANLETRVQNLD+ DYIFQVEVPTEEVTEIKNGQR Sbjct: 73 MKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVPTEEVTEIKNGQR 132 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 K VNRKVLPGYILVRM+L D+SW AVRNTPGVTGFVGATSRPS L++DDVVKFL+P Sbjct: 133 KNVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSIDDVVKFLVPASQQ 192 Query: 158 XXXXXXXXXXXXXXXXXL-ERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKV 216 + +P +EVD+EVGESVTVMDGPFATLPA+I+EVNAEQQKLKV Sbjct: 193 KKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASISEVNAEQQKLKV 252 Query: 217 LVSIFGRETPVELTFNQVSKI 237 LVSIFGRETPVEL F QV+KI Sbjct: 253 LVSIFGRETPVELAFTQVAKI 273 >tr|C2ALA5|C2ALA5_TSUPA Tax_Id=521096 RecName: Full=Transcription antitermination protein nusG;[Tsukamurella paurometabola DSM 20162] Length = 276 Score = 298 bits (762), Expect = 4e-79 Identities = 150/205 (73%), Positives = 170/205 (82%), Gaps = 5/205 (2%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 LKA+LR+ PG+WYV+H+YAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQ+ Sbjct: 71 LKAQLRTAPGDWYVIHTYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQQ 130 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLP---- 153 K+VNRKVLPGYILVRMDL D+SW AVRNTPGVTGFVG TS+PS LT+++VVKFLLP Sbjct: 131 KRVNRKVLPGYILVRMDLNDESWGAVRNTPGVTGFVGLTSKPSPLTMNEVVKFLLPESAR 190 Query: 154 -RXXXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQ 212 + + P +EVD+EVGESVTVMDGPFATLPA+I+E+NAEQ+ Sbjct: 191 TKPAKDKGAAADGAAAASGGAVSQGPAVEVDFEVGESVTVMDGPFATLPASISEINAEQR 250 Query: 213 KLKVLVSIFGRETPVELTFNQVSKI 237 KLKVLVSIFGRETPVEL FNQV KI Sbjct: 251 KLKVLVSIFGRETPVELAFNQVEKI 275 >tr|A4FPR1|A4FPR1_SACEN Tax_Id=405948 (nusG)RecName: Full=Transcription antitermination protein nusG;[Saccharopolyspora erythraea] Length = 283 Score = 288 bits (738), Expect = 3e-76 Identities = 148/200 (74%), Positives = 162/200 (81%), Gaps = 3/200 (1%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+A LR PGEWYVVHSYAGYENKVK NLETR Q LDV DYIFQVEVPTEEVTEIKNGQR Sbjct: 87 LRAALRRAPGEWYVVHSYAGYENKVKTNLETRAQTLDVEDYIFQVEVPTEEVTEIKNGQR 146 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 K V RKVLPGYILVRM+L D SW+AVRNTPGVTGF+GATS PS L++DDV+KFL PR Sbjct: 147 KLVQRKVLPGYILVRMELNDASWSAVRNTPGVTGFIGATSHPSPLSIDDVLKFLAPR--- 203 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVL 217 +P +EVD+EVGES+TVMDGPFATLPATI+EVNA+ QKLKVL Sbjct: 204 AEKEAKPEAGKKAAAPAAAKPSVEVDFEVGESITVMDGPFATLPATISEVNADAQKLKVL 263 Query: 218 VSIFGRETPVELTFNQVSKI 237 VSIFGRETPVEL+FNQVSKI Sbjct: 264 VSIFGRETPVELSFNQVSKI 283 >tr|D0L4W7|D0L4W7_GORB4 Tax_Id=526226 SubName: Full=Transcription termination/antitermination factor NusG;[Gordonia bronchialis] Length = 299 Score = 288 bits (736), Expect = 5e-76 Identities = 146/202 (72%), Positives = 164/202 (81%), Gaps = 2/202 (0%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ +LR PG+WYV+HSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQ Sbjct: 98 LRKQLRRAPGDWYVIHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQP 157 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPR--X 155 K+VNRKVLPGYILVRMDL DDSW AVRNTPGVTGFVG S+PS L+L++V++FL+PR Sbjct: 158 KKVNRKVLPGYILVRMDLNDDSWGAVRNTPGVTGFVGMNSKPSPLSLNEVLQFLMPRTEA 217 Query: 156 XXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 +EVD+EVGESVTVMDGPFATLPA+I+EVNAEQ+K+K Sbjct: 218 KKPAAAKGAGAEGVEAAAAAATATIEVDFEVGESVTVMDGPFATLPASISEVNAEQRKVK 277 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVEL FNQV KI Sbjct: 278 VLVSIFGRETPVELAFNQVEKI 299 >tr|C6WN74|C6WN74_ACTMD Tax_Id=446462 RecName: Full=Transcription antitermination protein nusG;[Actinosynnema mirum] Length = 266 Score = 285 bits (728), Expect = 4e-75 Identities = 145/200 (72%), Positives = 164/200 (82%), Gaps = 6/200 (3%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 ++ LR PG+WYVVHSYAGYENKVK NLETR+Q LD+ DYIFQVEVPTEEVTEIKNGQR Sbjct: 73 MREALRRAPGDWYVVHSYAGYENKVKTNLETRIQTLDMEDYIFQVEVPTEEVTEIKNGQR 132 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 KQV RKVLPGYILVRM+L D SW+AVRNTPGVTGFVGATS+PS LT+D+V+KFLLP+ Sbjct: 133 KQVQRKVLPGYILVRMELNDGSWSAVRNTPGVTGFVGATSKPSPLTVDEVLKFLLPQGKQ 192 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVL 217 + +EVD+EVGESVTVMDGPFATLPATI+EVNA+ QKLKVL Sbjct: 193 EPAAGKKAATTPV------KSTVEVDFEVGESVTVMDGPFATLPATISEVNADGQKLKVL 246 Query: 218 VSIFGRETPVELTFNQVSKI 237 VSIFGRETPVEL+F+QVSKI Sbjct: 247 VSIFGRETPVELSFSQVSKI 266 >tr|C7MTH0|C7MTH0_SACVD Tax_Id=471857 RecName: Full=Transcription antitermination protein nusG;[Saccharomonospora viridis] Length = 267 Score = 282 bits (721), Expect = 2e-74 Identities = 146/200 (73%), Positives = 163/200 (81%), Gaps = 2/200 (1%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+AEL S PG+WYVVHSYAGYEN+VK+N+ETR Q LDV DYIFQVEVPTEEVTEIKNGQR Sbjct: 70 LRAELESLPGDWYVVHSYAGYENRVKSNIETRRQTLDVEDYIFQVEVPTEEVTEIKNGQR 129 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 K V RKVLPGYILVRM++ D SW+AVRNTPGVTGFVGATSRPS L+LD+VVKFL P+ Sbjct: 130 KIVQRKVLPGYILVRMEMNDASWSAVRNTPGVTGFVGATSRPSPLSLDEVVKFLAPK--V 187 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVL 217 + +EVD+EVGESVTVMDGPFATLPATI+EVN + QKLKVL Sbjct: 188 EKAAPAKAKGEPAAEEQVAAGPVEVDFEVGESVTVMDGPFATLPATISEVNVDAQKLKVL 247 Query: 218 VSIFGRETPVELTFNQVSKI 237 VSIFGRETPVEL+FNQVSKI Sbjct: 248 VSIFGRETPVELSFNQVSKI 267 >tr|C0U8J5|C0U8J5_9ACTO Tax_Id=526225 RecName: Full=Transcription antitermination protein nusG;[Geodermatophilus obscurus DSM 43160] Length = 297 Score = 275 bits (704), Expect = 2e-72 Identities = 139/200 (69%), Positives = 159/200 (79%), Gaps = 4/200 (2%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 ++ LRS+ G+WYV+HSYAGYENKVK NLE+R+Q+LD+ DYIFQ+EVPTEEVTEIKNG+R Sbjct: 102 MRKVLRSQFGDWYVIHSYAGYENKVKTNLESRIQSLDMEDYIFQIEVPTEEVTEIKNGKR 161 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 QVNRK LPGY+LVRMDL D+SW AVRNTPGVTGFVGATSRPS L++D+VV L P Sbjct: 162 TQVNRKKLPGYLLVRMDLNDESWGAVRNTPGVTGFVGATSRPSPLSIDEVVSLLAP---- 217 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVL 217 P VD+EVGESVTVMDGPFATLPATINE+NAEQQKL+VL Sbjct: 218 AATPQAARTTETTSTTTAAAPTTVVDFEVGESVTVMDGPFATLPATINEINAEQQKLQVL 277 Query: 218 VSIFGRETPVELTFNQVSKI 237 VSIFGRETPVEL+FNQV KI Sbjct: 278 VSIFGRETPVELSFNQVQKI 297 >tr|C8XBG0|C8XBG0_NAKMY Tax_Id=479431 SubName: Full=NusG antitermination factor;[Nakamurella multipartita] Length = 306 Score = 273 bits (699), Expect = 9e-72 Identities = 143/202 (70%), Positives = 162/202 (80%), Gaps = 10/202 (4%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L++ L+ GEWYVVHSYAGYENKVK NLETR+++LD+ DYIFQ+EVPTEEVTEIKNGQR Sbjct: 113 LRSALKRAAGEWYVVHSYAGYENKVKTNLETRIKSLDMEDYIFQIEVPTEEVTEIKNGQR 172 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATS-RPSALTLDDVVKFLLPRXX 156 KQV RKV PGYILVRMDLTD SW+AVRNTPGVTGFVGAT+ +PSALT+D+VVK L P Sbjct: 173 KQVQRKVYPGYILVRMDLTDQSWSAVRNTPGVTGFVGATAQKPSALTIDEVVKILTPTAP 232 Query: 157 XXXXXXXXXXXXXXXXXXLERPV-LEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLK 215 PV EVD+ +GESVTVMDGPFATLPATINEVNA+ QKLK Sbjct: 233 RKPASVATTPG--------SAPVRTEVDFSIGESVTVMDGPFATLPATINEVNADAQKLK 284 Query: 216 VLVSIFGRETPVELTFNQVSKI 237 VLVSIFGRETPVEL+F+QV+KI Sbjct: 285 VLVSIFGRETPVELSFSQVAKI 306 >tr|Q47LI0|Q47LI0_THEFY Tax_Id=269800 RecName: Full=Transcription antitermination protein nusG;[Thermobifida fusca] Length = 250 Score = 263 bits (671), Expect = 2e-68 Identities = 133/199 (66%), Positives = 157/199 (78%), Gaps = 10/199 (5%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 KAELR PGEWYVVH+YAGYEN+VKANLE R Q+L++ DYIFQVEVPT+EVTE+K+G+R+ Sbjct: 62 KAELRLLPGEWYVVHTYAGYENRVKANLENRTQSLNMEDYIFQVEVPTQEVTEVKSGKRQ 121 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 QV KVLPGY+LVRM+LTD+SWAAVR+TPGVTGFVG ++RP L+LD+V + L P Sbjct: 122 QVTEKVLPGYVLVRMELTDESWAAVRHTPGVTGFVGLSNRPVPLSLDEVAELLAPEPETE 181 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 P EV+YE+GESVTVMDGPFATLPAT++EVN + QKLKVLV Sbjct: 182 EEQAKKE----------AEPRGEVEYEIGESVTVMDGPFATLPATVSEVNPDTQKLKVLV 231 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL FNQVSKI Sbjct: 232 SIFGRETPVELGFNQVSKI 250 >tr|D1A3B3|D1A3B3_THECU Tax_Id=471852 SubName: Full=NusG antitermination factor;[Thermomonospora curvata DSM 43183] Length = 238 Score = 262 bits (669), Expect = 3e-68 Identities = 133/199 (66%), Positives = 155/199 (77%), Gaps = 10/199 (5%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K ELR PGEWYVVHSYAGYEN+VKAN+ETR Q+L++ DYIFQVEVP EVTEIK G+R+ Sbjct: 50 KRELRMLPGEWYVVHSYAGYENRVKANIETRTQSLNMEDYIFQVEVPQHEVTEIKQGKRQ 109 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 +VN K+LPGYILVRM+LTD+SWAAVRNTPGVTGFVG ++PS L+LD+V K L P Sbjct: 110 KVNEKMLPGYILVRMELTDESWAAVRNTPGVTGFVGLLNKPSPLSLDEVAKLLAP----- 164 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 + V++EVGESVTVMDGPF TLPAT++E+N EQQKLKVLV Sbjct: 165 -----PPEEEKGKAKEQTKVTSTVEFEVGESVTVMDGPFQTLPATVSEINVEQQKLKVLV 219 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+FNQVSKI Sbjct: 220 SIFGRETPVELSFNQVSKI 238 >tr|C4ECQ8|C4ECQ8_STRRS Tax_Id=479432 RecName: Full=Transcription antitermination protein nusG;[Streptosporangium roseum DSM 43021] Length = 266 Score = 258 bits (658), Expect = 5e-67 Identities = 127/199 (63%), Positives = 157/199 (78%), Gaps = 11/199 (5%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K +LRS+ GEWYV+HSYAGYEN+VK+N+ETR Q+L++ DYIFQVEVPT VTE+K+G+R+ Sbjct: 79 KRQLRSQFGEWYVIHSYAGYENRVKSNIETRTQSLNMEDYIFQVEVPTHHVTEVKSGKRQ 138 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V +VLPGY+LVRMDLTD+SW+AVRNTPGVTGFVG +++PS L+LD+V K L P Sbjct: 139 LVKERVLPGYVLVRMDLTDESWSAVRNTPGVTGFVGLSNKPSPLSLDEVAKLLAPE---- 194 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 + VD+E+GESVTVMDGPFATLPAT++E++AE QKLKVLV Sbjct: 195 -------PSEEVKKSTAKASAATVDFEIGESVTVMDGPFATLPATVSEISAESQKLKVLV 247 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+FNQVSKI Sbjct: 248 SIFGRETPVELSFNQVSKI 266 >tr|D1BCA3|D1BCA3_9MICO Tax_Id=446469 SubName: Full=Transcription antitermination protein nusG;[Sanguibacter keddieii DSM 10542] Length = 273 Score = 251 bits (641), Expect = 5e-65 Identities = 128/199 (64%), Positives = 151/199 (75%), Gaps = 8/199 (4%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K ELRSKPG+WYV+HSYAGYEN+VKANLE R+Q+L++ DYIFQ+EVP EEVTEIKN Q+K Sbjct: 83 KRELRSKPGDWYVIHSYAGYENRVKANLENRIQSLNMEDYIFQIEVPMEEVTEIKNAQKK 142 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P LT ++V L P Sbjct: 143 IVRRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTQNEVFGMLAPLIAPK 202 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 P +EVD+ VGESVTV DGPF TLPATI+E+NAE QKLKVLV Sbjct: 203 AEAGAKGSG--------SAPAIEVDFTVGESVTVTDGPFDTLPATISEINAEGQKLKVLV 254 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+F+QV+KI Sbjct: 255 SIFGRETPVELSFSQVAKI 273 >tr|D1BWR8|D1BWR8_9MICO Tax_Id=446471 SubName: Full=NusG antitermination factor;[Xylanimonas cellulosilytica DSM 15894] Length = 265 Score = 247 bits (630), Expect = 9e-64 Identities = 126/199 (63%), Positives = 149/199 (74%), Gaps = 3/199 (1%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K LRS+ G+WYV+HSYAGYEN+VKANLE R+Q+L++ DYIFQ+EVP EEVTEIKN Q+K Sbjct: 70 KRTLRSQLGDWYVIHSYAGYENRVKANLENRIQSLNMEDYIFQIEVPMEEVTEIKNAQKK 129 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P LTLD+V L P Sbjct: 130 TVRRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTLDEVFSMLAP---TM 186 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 + + VD+EVGESVTV DGPF TLPATI+E+N E QKLKVLV Sbjct: 187 LEAPAAAGKPSTAAAKAKAAAVVVDFEVGESVTVTDGPFDTLPATISEINVEAQKLKVLV 246 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+FNQV+KI Sbjct: 247 SIFGRETPVELSFNQVAKI 265 >tr|C1YIW7|C1YIW7_NOCDA Tax_Id=446468 RecName: Full=Transcription antitermination protein nusG;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 280 Score = 244 bits (624), Expect = 4e-63 Identities = 121/199 (60%), Positives = 154/199 (77%), Gaps = 4/199 (2%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K EL PG+WYVVH+YAGYE +VKAN+E+R Q+L++ +YIFQVEVP EVTE+K+G+R+ Sbjct: 86 KNELVLLPGDWYVVHTYAGYEKRVKANVESRTQSLNMEEYIFQVEVPEHEVTEVKSGKRQ 145 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 QV KVLPGY+LVRMDLTD+SW+A+RNTPGVTGFVG +++P+ L+L +V K L P Sbjct: 146 QVTEKVLPGYVLVRMDLTDESWSAIRNTPGVTGFVGLSNKPAPLSLTEVAKLLAPE---- 201 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 + ++V YEVGESVTVM+GPFATLPAT++E+N + QKLKVLV Sbjct: 202 PEVEPEQAQQARTAGGVGEARMDVAYEVGESVTVMEGPFATLPATVSEINPDTQKLKVLV 261 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+FNQV+KI Sbjct: 262 SIFGRETPVELSFNQVAKI 280 >tr|A8LC69|A8LC69_FRASN Tax_Id=298653 RecName: Full=Transcription antitermination protein nusG;[Frankia sp.] Length = 273 Score = 242 bits (618), Expect = 2e-62 Identities = 124/196 (63%), Positives = 144/196 (73%), Gaps = 15/196 (7%) Query: 42 LRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVN 101 L PGEWYVVHSYAGYENKVK NLETR+ +L++ DYIFQ+EVPTEEV +KNG+R+ V Sbjct: 93 LEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKRQLVQ 152 Query: 102 RKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXXXXX 161 +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++VV L P Sbjct: 153 QKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVVSILAPAAPKEKKV 212 Query: 162 XXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLVSIF 221 V ++EVGESVTVMDGPFATLPATI+E+N + Q+LKVLVSIF Sbjct: 213 ---------------ETVKAQEFEVGESVTVMDGPFATLPATISEINLDAQRLKVLVSIF 257 Query: 222 GRETPVELTFNQVSKI 237 GRETPVEL FNQV+KI Sbjct: 258 GRETPVELQFNQVAKI 273 >tr|C4RBQ4|C4RBQ4_9ACTO Tax_Id=219305 RecName: Full=Transcription antitermination protein nusG;[Micromonospora sp. ATCC 39149] Length = 240 Score = 242 bits (618), Expect = 2e-62 Identities = 126/204 (61%), Positives = 155/204 (75%), Gaps = 18/204 (8%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ +LR PG+WYVVHSYAGYENKVK NLETR+ +LD+ DYI+QVEVPT E E+KNG+R Sbjct: 51 LRQKLRYAPGDWYVVHSYAGYENKVKTNLETRITSLDMEDYIYQVEVPTREEVEVKNGKR 110 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGAT---SRPSALTLDDVVKFLLPR 154 Q+ KV PGYILVRM+LT +S++ VRNTPGVTGFVGAT RP+ L+LD+V+K+L P Sbjct: 111 SQIQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPLSLDEVLKWLAPT 170 Query: 155 XXXXXXXXXXXXXXXXXXXXLERPVLEV-DYEVGESVTVMDGPFATLPATINEVNAEQQK 213 +P ++V D+EVG+SVTV DG FA+LPATI+E+NA+QQK Sbjct: 171 VETEQKK--------------AKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQK 216 Query: 214 LKVLVSIFGRETPVELTFNQVSKI 237 LKVLVSIFGRETPVEL FNQV+KI Sbjct: 217 LKVLVSIFGRETPVELNFNQVTKI 240 >tr|Q0RRT7|Q0RRT7_FRAAA Tax_Id=326424 (nusG)RecName: Full=Transcription antitermination protein nusG;[Frankia alni] Length = 291 Score = 241 bits (616), Expect = 4e-62 Identities = 123/200 (61%), Positives = 146/200 (73%), Gaps = 15/200 (7%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ + PGEWYVVHSYAGYENKVK NLETR+ +L++ DYIFQ+EVPTEEV +KNG+R Sbjct: 107 LRRAIEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKR 166 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 + V +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++V+ L P Sbjct: 167 QLVQQKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVLSILAPAAPK 226 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVL 217 V ++EVGESVTVMDGPFATLPATI+E+N + Q+LKVL Sbjct: 227 EKKV---------------ETVRVQEFEVGESVTVMDGPFATLPATISEINLDAQRLKVL 271 Query: 218 VSIFGRETPVELTFNQVSKI 237 VSIFGRETPVEL FNQV+KI Sbjct: 272 VSIFGRETPVELQFNQVAKI 291 >tr|A4XBR1|A4XBR1_SALTO Tax_Id=369723 RecName: Full=Transcription antitermination protein nusG;[Salinispora tropica] Length = 242 Score = 241 bits (616), Expect = 4e-62 Identities = 126/204 (61%), Positives = 155/204 (75%), Gaps = 18/204 (8%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ +LR PG+WYVVHSYAGYENKVK NLETR+ +LD+ DYI+QVEVPT + E+KNG+R Sbjct: 53 LRQKLRYAPGDWYVVHSYAGYENKVKTNLETRITSLDMEDYIYQVEVPTRDEVEVKNGKR 112 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGAT---SRPSALTLDDVVKFLLPR 154 QV KV PGYILVRM+LT +S++ VRNTPGVTGFVGAT RP+ L+LD+V+K+L P Sbjct: 113 SQVQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPLSLDEVLKWLAPA 172 Query: 155 XXXXXXXXXXXXXXXXXXXXLERPVLEV-DYEVGESVTVMDGPFATLPATINEVNAEQQK 213 +P ++V D+EVG+SVTV DG FA+LPATI+E+NA+QQK Sbjct: 173 VEAVEKK--------------AKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQK 218 Query: 214 LKVLVSIFGRETPVELTFNQVSKI 237 LKVLVSIFGRETPVEL FNQV+KI Sbjct: 219 LKVLVSIFGRETPVELNFNQVAKI 242 >tr|A3TH76|A3TH76_9MICO Tax_Id=313589 RecName: Full=Transcription antitermination protein nusG;[Janibacter sp. HTCC2649] Length = 316 Score = 241 bits (616), Expect = 4e-62 Identities = 121/199 (60%), Positives = 148/199 (74%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 K +L SK G+WYV+HSYAGYEN+VK NLETR+Q+L++ D+IF++EVP EEVTEIK GQRK Sbjct: 118 KEDLASKFGDWYVIHSYAGYENRVKTNLETRIQSLNMEDFIFEIEVPMEEVTEIKGGQRK 177 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V R +PGY++VRMDLTD+SW AVR+TPGVTGFVG +P L+LD+V + P Sbjct: 178 LVRRVRMPGYVIVRMDLTDESWGAVRHTPGVTGFVGNAHQPVPLSLDEVYTMIKPAELEL 237 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 V++EVGESVTVMDGPF TLPATI+E+NAE QKLKVLV Sbjct: 238 AAAAAAGGGSTGSGAGSASQAPLVEFEVGESVTVMDGPFETLPATISEINAEGQKLKVLV 297 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL+F+QVSK+ Sbjct: 298 SIFGRETPVELSFSQVSKL 316 >tr|Q2JFJ0|Q2JFJ0_FRASC Tax_Id=106370 RecName: Full=Transcription antitermination protein nusG;[Frankia sp.] Length = 277 Score = 241 bits (615), Expect = 5e-62 Identities = 125/203 (61%), Positives = 149/203 (73%), Gaps = 21/203 (10%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ + PGEWYVVHSYAGYENKVK NLETR+ +L++ DYIFQ+EVPTEEV +KNG+R Sbjct: 93 LRRAIEDAPGEWYVVHSYAGYENKVKTNLETRISSLNMEDYIFQIEVPTEEVPVVKNGKR 152 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXX 157 + V +K PGYI VRMDLTD SW+AVRNTPGVTGFVG T+RPS L ++V+ L P Sbjct: 153 QLVQQKKYPGYIYVRMDLTDQSWSAVRNTPGVTGFVGLTNRPSPLRREEVLSILAP---- 208 Query: 158 XXXXXXXXXXXXXXXXXLERPVLEV---DYEVGESVTVMDGPFATLPATINEVNAEQQKL 214 E+ V V ++EVGESVTVMDGPFATLPATI+E+N + Q+L Sbjct: 209 --------------VVPKEKKVETVRVQEFEVGESVTVMDGPFATLPATISEINLDAQRL 254 Query: 215 KVLVSIFGRETPVELTFNQVSKI 237 KVLVSIFGRETPVEL FNQV+KI Sbjct: 255 KVLVSIFGRETPVELQFNQVAKI 277 >tr|A8M544|A8M544_SALAI Tax_Id=391037 RecName: Full=Transcription antitermination protein nusG;[Salinispora arenicola] Length = 242 Score = 241 bits (615), Expect = 5e-62 Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 18/204 (8%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ +LR PG+WYVVHSYAGYENKVK NLETR+ +LD+ DYI+QVEVPT + E+KNG+R Sbjct: 53 LRQKLRYAPGDWYVVHSYAGYENKVKTNLETRITSLDMEDYIYQVEVPTRDEVEVKNGKR 112 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGAT---SRPSALTLDDVVKFLLPR 154 Q+ KV PGYILVRM+LT +S++ VRNTPGVTGFVGAT RP+ L+LD+V+K+L P Sbjct: 113 SQIQAKVFPGYILVRMELTAESYSCVRNTPGVTGFVGATDRADRPAPLSLDEVLKWLAPA 172 Query: 155 XXXXXXXXXXXXXXXXXXXXLERPVLEV-DYEVGESVTVMDGPFATLPATINEVNAEQQK 213 +P ++V D+EVG+SVTV DG FA+LPATI+E+NA+QQK Sbjct: 173 VEAVEKK--------------AKPEVKVLDFEVGDSVTVTDGAFASLPATISEINADQQK 218 Query: 214 LKVLVSIFGRETPVELTFNQVSKI 237 LKVLVSIFGRETPVEL FNQV+KI Sbjct: 219 LKVLVSIFGRETPVELNFNQVTKI 242 >tr|C1RPX5|C1RPX5_9CELL Tax_Id=446466 RecName: Full=Transcription antitermination protein nusG;[Cellulomonas flavigena DSM 20109] Length = 255 Score = 241 bits (614), Expect = 6e-62 Identities = 128/200 (64%), Positives = 149/200 (74%), Gaps = 9/200 (4%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 KA+LR PG+WYV+HSYAGYEN+VKANLE+R Q+L++ DYI QVEVP EEV EIKN QRK Sbjct: 64 KAKLRRLPGDWYVIHSYAGYENRVKANLESRTQSLNMEDYIHQVEVPMEEVVEIKNAQRK 123 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P LTLD+V L P Sbjct: 124 VVKRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGHTHQPVPLTLDEVFSMLAPAIETK 183 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMD-GPFATLPATINEVNAEQQKLKVL 217 +PV EVD+ VGESVTV D GPF TLPATI+E+N E QKLKVL Sbjct: 184 APAQQAAKAS-------SKPV-EVDFTVGESVTVTDGGPFDTLPATISEINPENQKLKVL 235 Query: 218 VSIFGRETPVELTFNQVSKI 237 VS+FGRETPVEL+F+QVSKI Sbjct: 236 VSLFGRETPVELSFSQVSKI 255 >tr|C4DUT2|C4DUT2_9ACTO Tax_Id=446470 RecName: Full=Transcription antitermination protein nusG;[Stackebrandtia nassauensis DSM 44728] Length = 271 Score = 240 bits (613), Expect = 8e-62 Identities = 120/203 (59%), Positives = 152/203 (74%), Gaps = 3/203 (1%) Query: 38 LKAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQR 97 L+ ELR PGEWYVVHSYAG+EN+VK+NLE R+ + D+ DYI+Q+EVPT+ E+KNG+R Sbjct: 69 LRQELRFAPGEWYVVHSYAGFENRVKSNLEGRIASFDMEDYIYQIEVPTQMQVEVKNGKR 128 Query: 98 KQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATS---RPSALTLDDVVKFLLPR 154 +V KV P Y+LVRM+LT +S++ VRNTPGVTGFVGAT+ RPS LTL+DV+K+L P Sbjct: 129 SRVQAKVFPSYVLVRMELTPESYSVVRNTPGVTGFVGATNQTDRPSPLTLEDVLKWLAPA 188 Query: 155 XXXXXXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKL 214 +P +++D+ VG+SVTV DG FA+LPATI+E+NA+QQKL Sbjct: 189 VAPEEPAATGSGESSGEGGATAKPEIKLDFAVGDSVTVTDGAFASLPATISEINADQQKL 248 Query: 215 KVLVSIFGRETPVELTFNQVSKI 237 KVLVSIFGRETPVEL FNQVS I Sbjct: 249 KVLVSIFGRETPVELNFNQVSTI 271 >tr|A6W5S5|A6W5S5_KINRD Tax_Id=266940 RecName: Full=Transcription antitermination protein nusG;[Kineococcus radiotolerans] Length = 320 Score = 239 bits (609), Expect = 2e-61 Identities = 120/199 (60%), Positives = 146/199 (73%), Gaps = 3/199 (1%) Query: 39 KAELRSKPGEWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRK 98 + +LR PGEW+V+HSYAGYEN+VK NLETR+ +L++ DYIFQVEVP EEV E+KNG RK Sbjct: 125 RKKLRRMPGEWFVIHSYAGYENRVKTNLETRMTSLNMEDYIFQVEVPMEEVVEVKNGTRK 184 Query: 99 QVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALTLDDVVKFLLPRXXXX 158 V R +PGY+LVRMDLTD+SW AVR+TPGVTGFVG T +P L+ D++ L P Sbjct: 185 NVRRVRIPGYVLVRMDLTDESWGAVRHTPGVTGFVGNTHQPVPLSNDEIFSMLAP---TL 241 Query: 159 XXXXXXXXXXXXXXXXLERPVLEVDYEVGESVTVMDGPFATLPATINEVNAEQQKLKVLV 218 P VD+EVGESVTVM+GPF TLPATI+E++A++QKL VLV Sbjct: 242 QPTAKAGEKTETGGGTASAPARVVDFEVGESVTVMEGPFETLPATISEISADRQKLTVLV 301 Query: 219 SIFGRETPVELTFNQVSKI 237 SIFGRETPVEL FNQV+KI Sbjct: 302 SIFGRETPVELNFNQVAKI 320 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.314 0.134 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,455,686,467 Number of extensions: 48694000 Number of successful extensions: 91743 Number of sequences better than 10.0: 1943 Number of HSP's gapped: 90630 Number of HSP's successfully gapped: 2232 Length of query: 237 Length of database: 3,846,993,858 Length adjustment: 133 Effective length of query: 104 Effective length of database: 2,347,391,859 Effective search space: 244128753336 Effective search space used: 244128753336 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 78 (34.7 bits)