BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1039 (80 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0PM71|RL29_MYCUA Tax_Id=362242 (rpmC)RecName: Full=50S ribos... 111 3e-23 sp|B2HSN9|RL29_MYCMM Tax_Id=216594 (rpmC)RecName: Full=50S ribos... 111 3e-23 sp|O32989|RL29_MYCLE Tax_Id=1769 (rpmC)RecName: Full=50S ribosom... 99 2e-19 tr|B8ZSB1|B8ZSB1_MYCLB Tax_Id=561304 (rpmC)SubName: Full=50S rib... 99 2e-19 sp|P95057|RL29_MYCTU Tax_Id=1773 (rpmC)RecName: Full=50S ribosom... 97 8e-19 sp|A5U095|RL29_MYCTA Tax_Id=419947 (rpmC)RecName: Full=50S ribos... 97 8e-19 sp|C1AL43|RL29_MYCBT Tax_Id=561275 (rpmC)RecName: Full=50S ribos... 97 8e-19 sp|A1KGJ0|RL29_MYCBP Tax_Id=410289 (rpmC)RecName: Full=50S ribos... 97 8e-19 sp|O06050|RL29_MYCBO Tax_Id=1765 (rpmC)RecName: Full=50S ribosom... 97 8e-19 tr|C6DUM4|C6DUM4_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal... 97 8e-19 tr|A5WK77|A5WK77_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal... 97 8e-19 tr|A4KF29|A4KF29_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal... 97 8e-19 tr|A2VG17|A2VG17_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal... 97 8e-19 sp|Q73SA6|RL29_MYCPA Tax_Id=1770 (rpmC)RecName: Full=50S ribosom... 96 2e-18 sp|A0QL10|RL29_MYCA1 Tax_Id=243243 (rpmC)RecName: Full=50S ribos... 96 2e-18 sp|Q1BD99|RL29_MYCSS Tax_Id=164756 (rpmC)RecName: Full=50S ribos... 90 9e-17 sp|A1UBP4|RL29_MYCSK Tax_Id=189918 (rpmC)RecName: Full=50S ribos... 90 9e-17 sp|A3PVC9|RL29_MYCSJ Tax_Id=164757 (rpmC)RecName: Full=50S ribos... 90 9e-17 sp|A0QSD9|RL29_MYCS2 Tax_Id=246196 (rpmC)RecName: Full=50S ribos... 89 2e-16 sp|B1MGE2|RL29_MYCA9 Tax_Id=561007 (rpmC)RecName: Full=50S ribos... 87 6e-16 sp|A4TEB6|RL29_MYCGI Tax_Id=350054 (rpmC)RecName: Full=50S ribos... 87 8e-16 sp|A1T4P7|RL29_MYCVP Tax_Id=350058 (rpmC)RecName: Full=50S ribos... 86 2e-15 tr|D0L2M8|D0L2M8_GORB4 Tax_Id=526226 SubName: Full=Ribosomal pro... 82 2e-14 sp|Q0S3G8|RL29_RHOSR Tax_Id=101510 (rpmC)RecName: Full=50S ribos... 81 3e-14 sp|C1B020|RL29_RHOOB Tax_Id=632772 (rpmC)RecName: Full=50S ribos... 81 3e-14 sp|C0ZW33|RL29_RHOE4 Tax_Id=234621 (rpmC)RecName: Full=50S ribos... 81 3e-14 tr|C3JH19|C3JH19_RHOER Tax_Id=596309 (rpmC)SubName: Full=Ribosom... 81 3e-14 tr|C6WM19|C6WM19_ACTMD Tax_Id=446462 SubName: Full=Ribosomal pro... 79 2e-13 tr|C2ALX5|C2ALX5_TSUPA Tax_Id=521096 SubName: Full=LSU ribosomal... 79 2e-13 sp|Q5Z1V5|RL29_NOCFA Tax_Id=37329 (rpmC)RecName: Full=50S riboso... 79 2e-13 tr|C8XCH3|C8XCH3_NAKMY Tax_Id=479431 SubName: Full=Ribosomal pro... 77 5e-13 tr|C7MTL3|C7MTL3_SACVD Tax_Id=471857 SubName: Full=LSU ribosomal... 77 6e-13 sp|Q8NSZ9|RL29_CORGL Tax_Id=1718 (rpmC)RecName: Full=50S ribosom... 75 3e-12 sp|A4QBI9|RL29_CORGB Tax_Id=340322 (rpmC)RecName: Full=50S ribos... 75 3e-12 sp|Q8FS74|RL29_COREF Tax_Id=152794 (rpmC)RecName: Full=50S ribos... 75 3e-12 tr|C8NMI0|C8NMI0_COREF Tax_Id=196164 (rpmC)SubName: Full=Conserv... 75 3e-12 tr|C0U8M1|C0U8M1_9ACTO Tax_Id=526225 SubName: Full=LSU ribosomal... 75 3e-12 sp|B1VEU4|RL29_CORU7 Tax_Id=504474 (rpmC)RecName: Full=50S ribos... 74 7e-12 sp|A4FPL7|RL29_SACEN Tax_Id=405948 (rpmC)RecName: Full=50S ribos... 73 9e-12 sp|Q6NJC7|RL29_CORDI Tax_Id=1717 (rpmC)RecName: Full=50S ribosom... 73 9e-12 tr|C5VF74|C5VF74_9CORY Tax_Id=553207 (rpmC)SubName: Full=Ribosom... 73 9e-12 tr|C0E0A1|C0E0A1_9CORY Tax_Id=566549 SubName: Full=Putative unch... 73 9e-12 tr|C8NX08|C8NX08_9CORY Tax_Id=585529 SubName: Full=50S ribosomal... 73 1e-11 tr|C0XUM7|C0XUM7_9CORY Tax_Id=525263 (rpmC)SubName: Full=50S rib... 72 2e-11 sp|C3PKR0|RL29_CORA7 Tax_Id=548476 (rpmC)RecName: Full=50S ribos... 72 2e-11 tr|C6R977|C6R977_9CORY Tax_Id=553206 (rpmC)SubName: Full=Ribosom... 72 2e-11 tr|C2BK77|C2BK77_9CORY Tax_Id=525264 (rpmC)SubName: Full=50S rib... 72 2e-11 tr|C0WIH9|C0WIH9_9CORY Tax_Id=525260 (rpmC)SubName: Full=50S rib... 72 2e-11 sp|A4XBN8|RL29_SALTO Tax_Id=369723 (rpmC)RecName: Full=50S ribos... 71 4e-11 tr|C2CPZ9|C2CPZ9_CORST Tax_Id=525268 (rpmC)SubName: Full=50S rib... 71 4e-11 >sp|A0PM71|RL29_MYCUA Tax_Id=362242 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium ulcerans] Length = 80 Score = 111 bits (277), Expect = 3e-23 Identities = 59/80 (73%), Positives = 59/80 (73%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQLNNNRRLRTVRQEIARVYTV Sbjct: 1 MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLAAGPGEPDGKES Sbjct: 61 LRERELGLAAGPGEPDGKES 80 >sp|B2HSN9|RL29_MYCMM Tax_Id=216594 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium marinum] Length = 80 Score = 111 bits (277), Expect = 3e-23 Identities = 59/80 (73%), Positives = 59/80 (73%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQLNNNRRLRTVRQEIARVYTV Sbjct: 1 MAVGISPGELRELTEEELTERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLAAGPGEPDGKES Sbjct: 61 LRERELGLAAGPGEPDGKES 80 >sp|O32989|RL29_MYCLE Tax_Id=1769 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium leprae] Length = 80 Score = 99.0 bits (245), Expect = 2e-19 Identities = 53/80 (66%), Positives = 56/80 (70%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQLNNNRRLRTVR EIARVYTV Sbjct: 1 MAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRTVRHEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GPG +G+ES Sbjct: 61 LRERELGLASGPGGANGEES 80 >tr|B8ZSB1|B8ZSB1_MYCLB Tax_Id=561304 (rpmC)SubName: Full=50S ribosomal protein L29;[Mycobacterium leprae] Length = 81 Score = 99.0 bits (245), Expect = 2e-19 Identities = 53/80 (66%), Positives = 56/80 (70%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQLNNNRRLRTVR EIARVYTV Sbjct: 2 MAVGISPGELRELTDEELIERLRESKEELFNLRFQMATGQLNNNRRLRTVRHEIARVYTV 61 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GPG +G+ES Sbjct: 62 LRERELGLASGPGGANGEES 81 >sp|P95057|RL29_MYCTU Tax_Id=1773 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium tuberculosis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >sp|A5U095|RL29_MYCTA Tax_Id=419947 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium tuberculosis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >sp|C1AL43|RL29_MYCBT Tax_Id=561275 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium bovis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >sp|A1KGJ0|RL29_MYCBP Tax_Id=410289 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium bovis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >sp|O06050|RL29_MYCBO Tax_Id=1765 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium bovis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >tr|C6DUM4|C6DUM4_MYCTK Tax_Id=478434 SubName: Full=50S ribosomal protein L29 rpmC;[Mycobacterium tuberculosis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >tr|A5WK77|A5WK77_MYCTF Tax_Id=336982 SubName: Full=50S ribosomal protein L29 rpmC;[Mycobacterium tuberculosis] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >tr|A4KF29|A4KF29_MYCTU Tax_Id=395095 SubName: Full=50S ribosomal protein L29 rpmC;[Mycobacterium tuberculosis str. Haarlem] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >tr|A2VG17|A2VG17_MYCTU Tax_Id=348776 SubName: Full=50S ribosomal protein L29 rpmC;[Mycobacterium tuberculosis C] Length = 77 Score = 96.7 bits (239), Expect = 8e-19 Identities = 53/80 (66%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQLNNNRRLRTVRQEIAR+YTV Sbjct: 1 MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA G PDGKES Sbjct: 61 LRERELGLATG---PDGKES 77 >sp|Q73SA6|RL29_MYCPA Tax_Id=1770 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium paratuberculosis] Length = 77 Score = 95.5 bits (236), Expect = 2e-18 Identities = 54/80 (67%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQL NNRRLRTVRQEIARVYTV Sbjct: 1 MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+G PDGKES Sbjct: 61 LRERELGLASG---PDGKES 77 >sp|A0QL10|RL29_MYCA1 Tax_Id=243243 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium avium] Length = 77 Score = 95.5 bits (236), Expect = 2e-18 Identities = 54/80 (67%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVGISPG FNLRFQMATGQL NNRRLRTVRQEIARVYTV Sbjct: 1 MAVGISPGELRELTDDELTERLRESKEELFNLRFQMATGQLTNNRRLRTVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+G PDGKES Sbjct: 61 LRERELGLASG---PDGKES 77 >sp|Q1BD99|RL29_MYCSS Tax_Id=164756 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium sp.] Length = 77 Score = 89.7 bits (221), Expect = 9e-17 Identities = 50/80 (62%), Positives = 54/80 (67%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQL+NNRRLR VRQEIARVYTV Sbjct: 1 MAVGVSPGELRELSDDELIERLRESKEELFNLRFQMATGQLSNNRRLRVVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GP G+ES Sbjct: 61 LRERELGLASGPA---GEES 77 >sp|A1UBP4|RL29_MYCSK Tax_Id=189918 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium sp.] Length = 77 Score = 89.7 bits (221), Expect = 9e-17 Identities = 50/80 (62%), Positives = 54/80 (67%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQL+NNRRLR VRQEIARVYTV Sbjct: 1 MAVGVSPGELRELSDDELIERLRESKEELFNLRFQMATGQLSNNRRLRVVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GP G+ES Sbjct: 61 LRERELGLASGPA---GEES 77 >sp|A3PVC9|RL29_MYCSJ Tax_Id=164757 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium sp.] Length = 77 Score = 89.7 bits (221), Expect = 9e-17 Identities = 50/80 (62%), Positives = 54/80 (67%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG+SPG FNLRFQMATGQL+NNRRLR VRQEIARVYTV Sbjct: 1 MAVGVSPGELRELSDDELIERLRESKEELFNLRFQMATGQLSNNRRLRVVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GP G+ES Sbjct: 61 LRERELGLASGPA---GEES 77 >sp|A0QSD9|RL29_MYCS2 Tax_Id=246196 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium smegmatis] Length = 77 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/80 (62%), Positives = 54/80 (67%), Gaps = 3/80 (3%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG +PG FNLRFQMATGQL+NNRRLRTVRQEIARVYTV Sbjct: 1 MAVGTTPGELRELTDDELKDKLRESKEELFNLRFQMATGQLSNNRRLRTVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPDGKES 80 LRERELGLA+GP G+ES Sbjct: 61 LRERELGLASGPA---GEES 77 >sp|B1MGE2|RL29_MYCA9 Tax_Id=561007 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium abscessus] Length = 78 Score = 87.0 bits (214), Expect = 6e-16 Identities = 47/78 (60%), Positives = 49/78 (62%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 M VGIS G FNLRFQMATGQL NNRRLR VRQEIAR+YTV Sbjct: 1 MTVGISAGELRESTEEELITKLRESKEELFNLRFQMATGQLANNRRLRAVRQEIARIYTV 60 Query: 61 LRERELGLAAGPGEPDGK 78 +RERELGLAAGP D K Sbjct: 61 MRERELGLAAGPDSEDSK 78 >sp|A4TEB6|RL29_MYCGI Tax_Id=350054 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium gilvum] Length = 77 Score = 86.7 bits (213), Expect = 8e-16 Identities = 48/76 (63%), Positives = 49/76 (64%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG + G FNLRFQMATGQL NNRRLR VRQEIARVYTV Sbjct: 1 MAVGTTTGELRELSDDELTDKLRESKEELFNLRFQMATGQLANNRRLRVVRQEIARVYTV 60 Query: 61 LRERELGLAAGPGEPD 76 LRERELGLAAGPG D Sbjct: 61 LRERELGLAAGPGGED 76 >sp|A1T4P7|RL29_MYCVP Tax_Id=350058 (rpmC)RecName: Full=50S ribosomal protein L29;[Mycobacterium vanbaalenii] Length = 77 Score = 85.5 bits (210), Expect = 2e-15 Identities = 47/76 (61%), Positives = 49/76 (64%) Query: 1 MAVGISPGXXXXXXXXXXXXXXXXXXXXXFNLRFQMATGQLNNNRRLRTVRQEIARVYTV 60 MAVG + G FNLRFQMATGQL NNRRLR VRQEIAR+YTV Sbjct: 1 MAVGTTTGELRELTDEELTDKLRESKEELFNLRFQMATGQLANNRRLRVVRQEIARLYTV 60 Query: 61 LRERELGLAAGPGEPD 76 LRERELGLAAGPG D Sbjct: 61 LRERELGLAAGPGGED 76 >tr|D0L2M8|D0L2M8_GORB4 Tax_Id=526226 SubName: Full=Ribosomal protein L29;[Gordonia bronchialis] Length = 77 Score = 82.0 bits (201), Expect = 2e-14 Identities = 39/47 (82%), Positives = 44/47 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPD 76 FNLRFQMATGQL+NNRRLRTVR+EIAR+YTV+RERELGLA+GP D Sbjct: 30 FNLRFQMATGQLDNNRRLRTVRREIARIYTVMRERELGLASGPDGDD 76 >sp|Q0S3G8|RL29_RHOSR Tax_Id=101510 (rpmC)RecName: Full=50S ribosomal protein L29;[Rhodococcus sp.] Length = 78 Score = 81.3 bits (199), Expect = 3e-14 Identities = 39/47 (82%), Positives = 42/47 (89%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPD 76 FNLRFQMATGQ++NNRRLRTVR EIAR+YTVLRERELGLA GP D Sbjct: 30 FNLRFQMATGQMDNNRRLRTVRHEIARIYTVLRERELGLAVGPDAGD 76 >sp|C1B020|RL29_RHOOB Tax_Id=632772 (rpmC)RecName: Full=50S ribosomal protein L29;[Rhodococcus opacus] Length = 78 Score = 81.3 bits (199), Expect = 3e-14 Identities = 39/47 (82%), Positives = 42/47 (89%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPD 76 FNLRFQMATGQ++NNRRLRTVR EIAR+YTVLRERELGLA GP D Sbjct: 30 FNLRFQMATGQMDNNRRLRTVRHEIARIYTVLRERELGLAVGPDAGD 76 >sp|C0ZW33|RL29_RHOE4 Tax_Id=234621 (rpmC)RecName: Full=50S ribosomal protein L29;[Rhodococcus erythropolis] Length = 78 Score = 81.3 bits (199), Expect = 3e-14 Identities = 39/47 (82%), Positives = 42/47 (89%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPD 76 FNLRFQMATGQ++NNRRLRTVR EIAR+YTVLRERELGLA GP D Sbjct: 30 FNLRFQMATGQMDNNRRLRTVRHEIARIYTVLRERELGLAVGPDAGD 76 >tr|C3JH19|C3JH19_RHOER Tax_Id=596309 (rpmC)SubName: Full=Ribosomal protein L29;[Rhodococcus erythropolis SK121] Length = 78 Score = 81.3 bits (199), Expect = 3e-14 Identities = 39/47 (82%), Positives = 42/47 (89%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPD 76 FNLRFQMATGQ++NNRRLRTVR EIAR+YTVLRERELGLA GP D Sbjct: 30 FNLRFQMATGQMDNNRRLRTVRHEIARIYTVLRERELGLAVGPDAGD 76 >tr|C6WM19|C6WM19_ACTMD Tax_Id=446462 SubName: Full=Ribosomal protein L29;[Actinosynnema mirum] Length = 82 Score = 79.0 bits (193), Expect = 2e-13 Identities = 38/43 (88%), Positives = 41/43 (95%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGP 72 FNLRFQMATGQL+NNRRLRTVR EIARVYTV+RERELGL+A P Sbjct: 30 FNLRFQMATGQLDNNRRLRTVRNEIARVYTVMRERELGLSASP 72 >tr|C2ALX5|C2ALX5_TSUPA Tax_Id=521096 SubName: Full=LSU ribosomal protein L29P;[Tsukamurella paurometabola DSM 20162] Length = 76 Score = 79.0 bits (193), Expect = 2e-13 Identities = 36/43 (83%), Positives = 42/43 (97%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGP 72 FNLRFQMATGQ++NNRRLRTVR +IAR+YT+LRERELGLA+GP Sbjct: 29 FNLRFQMATGQMSNNRRLRTVRTDIARIYTILRERELGLASGP 71 >sp|Q5Z1V5|RL29_NOCFA Tax_Id=37329 (rpmC)RecName: Full=50S ribosomal protein L29;[Nocardia farcinica] Length = 79 Score = 78.6 bits (192), Expect = 2e-13 Identities = 37/43 (86%), Positives = 40/43 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGP 72 FNLRFQMATGQL+NNRRLR VR EIAR+YTV+RERELGLA GP Sbjct: 30 FNLRFQMATGQLDNNRRLRVVRHEIARIYTVMRERELGLATGP 72 >tr|C8XCH3|C8XCH3_NAKMY Tax_Id=479431 SubName: Full=Ribosomal protein L29;[Nakamurella multipartita] Length = 80 Score = 77.4 bits (189), Expect = 5e-13 Identities = 34/45 (75%), Positives = 42/45 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGE 74 FNLRFQMATGQ++NNRRLRT++ +IAR+YTV+RERELGL+ GP E Sbjct: 28 FNLRFQMATGQMDNNRRLRTIKHDIARIYTVMRERELGLSVGPDE 72 >tr|C7MTL3|C7MTL3_SACVD Tax_Id=471857 SubName: Full=LSU ribosomal protein L29P;[Saccharomonospora viridis] Length = 83 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/49 (73%), Positives = 43/49 (87%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGEPDGK 78 FNLRFQMATGQL+NNRRLRTVR +IAR+YTV+RERELGL+ P E + + Sbjct: 32 FNLRFQMATGQLDNNRRLRTVRADIARIYTVMRERELGLSVSPEENESE 80 >sp|Q8NSZ9|RL29_CORGL Tax_Id=1718 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium glutamicum] Length = 76 Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/44 (77%), Positives = 41/44 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ+ATGQL NNRRLRTV+++IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQLATGQLTNNRRLRTVKRDIARIYTVIRERELGLSVVPG 73 >sp|A4QBI9|RL29_CORGB Tax_Id=340322 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium glutamicum] Length = 76 Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/44 (77%), Positives = 41/44 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ+ATGQL NNRRLRTV+++IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQLATGQLTNNRRLRTVKRDIARIYTVIRERELGLSVVPG 73 >sp|Q8FS74|RL29_COREF Tax_Id=152794 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium efficiens] Length = 76 Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/44 (77%), Positives = 41/44 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ+ATGQL NNRRLRTV+++IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQLATGQLTNNRRLRTVKRDIARIYTVIRERELGLSVVPG 73 >tr|C8NMI0|C8NMI0_COREF Tax_Id=196164 (rpmC)SubName: Full=Conserved domain protein;[Corynebacterium efficiens YS-314] Length = 76 Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/44 (77%), Positives = 41/44 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ+ATGQL NNRRLRTV+++IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQLATGQLTNNRRLRTVKRDIARIYTVIRERELGLSVVPG 73 >tr|C0U8M1|C0U8M1_9ACTO Tax_Id=526225 SubName: Full=LSU ribosomal protein L29P;[Geodermatophilus obscurus DSM 43160] Length = 77 Score = 74.7 bits (182), Expect = 3e-12 Identities = 33/45 (73%), Positives = 42/45 (93%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGE 74 FNLRFQ+ATGQL+NNRRL+TVR++IAR+YT++RERELGL+ P E Sbjct: 30 FNLRFQVATGQLDNNRRLQTVRRDIARIYTIMRERELGLSVAPSE 74 >sp|B1VEU4|RL29_CORU7 Tax_Id=504474 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium urealyticum] Length = 77 Score = 73.6 bits (179), Expect = 7e-12 Identities = 34/44 (77%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQMATGQL NNRRL V+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQMATGQLTNNRRLSVVKKDIARIYTVLRERELGLSTNPG 73 >sp|A4FPL7|RL29_SACEN Tax_Id=405948 (rpmC)RecName: Full=50S ribosomal protein L29;[Saccharopolyspora erythraea] Length = 80 Score = 73.2 bits (178), Expect = 9e-12 Identities = 33/43 (76%), Positives = 38/43 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGP 72 FNLRFQMATGQL NNRRLR VR++IAR+YT++RERELGL P Sbjct: 30 FNLRFQMATGQLENNRRLRVVRRDIARIYTIMRERELGLTVSP 72 >sp|Q6NJC7|RL29_CORDI Tax_Id=1717 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium diphtheriae] Length = 76 Score = 73.2 bits (178), Expect = 9e-12 Identities = 34/44 (77%), Positives = 40/44 (90%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRRLRTV+++IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQAATGQLTNNRRLRTVKRDIARIYTVIRERELGLSEVPG 73 >tr|C5VF74|C5VF74_9CORY Tax_Id=553207 (rpmC)SubName: Full=Ribosomal protein L29;[Corynebacterium matruchotii ATCC 14266] Length = 76 Score = 73.2 bits (178), Expect = 9e-12 Identities = 34/44 (77%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRRLRTV+ +IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQAATGQLTNNRRLRTVKHDIARIYTVIRERELGLSVVPG 73 >tr|C0E0A1|C0E0A1_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 76 Score = 73.2 bits (178), Expect = 9e-12 Identities = 34/44 (77%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRRLRTV+ +IAR+YTV+RERELGL+ PG Sbjct: 30 FNLRFQAATGQLTNNRRLRTVKHDIARIYTVIRERELGLSVVPG 73 >tr|C8NX08|C8NX08_9CORY Tax_Id=585529 SubName: Full=50S ribosomal protein L29;[Corynebacterium genitalium ATCC 33030] Length = 76 Score = 72.8 bits (177), Expect = 1e-11 Identities = 34/45 (75%), Positives = 40/45 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGE 74 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PGE Sbjct: 30 FNLRFQNATGQLTNNRRISTVKRDIARIYTVLRERELGLSTVPGE 74 >tr|C0XUM7|C0XUM7_9CORY Tax_Id=525263 (rpmC)SubName: Full=50S ribosomal protein L29;[Corynebacterium lipophiloflavum DSM 44291] Length = 76 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/44 (75%), Positives = 40/44 (90%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ+ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQLATGQLTNNRRISTVKRDIARIYTVLRERELGLSVVPG 73 >sp|C3PKR0|RL29_CORA7 Tax_Id=548476 (rpmC)RecName: Full=50S ribosomal protein L29;[Corynebacterium aurimucosum] Length = 76 Score = 72.0 bits (175), Expect = 2e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQKATGQLTNNRRIGTVKRDIARIYTVLRERELGLSVAPG 73 >tr|C6R977|C6R977_9CORY Tax_Id=553206 (rpmC)SubName: Full=Ribosomal protein L29;[Corynebacterium tuberculostearicum SK141] Length = 76 Score = 72.0 bits (175), Expect = 2e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQKATGQLTNNRRIGTVKRDIARIYTVLRERELGLSVAPG 73 >tr|C2BK77|C2BK77_9CORY Tax_Id=525264 (rpmC)SubName: Full=50S ribosomal protein L29;[Corynebacterium pseudogenitalium ATCC 33035] Length = 76 Score = 72.0 bits (175), Expect = 2e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQKATGQLTNNRRIGTVKRDIARIYTVLRERELGLSVAPG 73 >tr|C0WIH9|C0WIH9_9CORY Tax_Id=525260 (rpmC)SubName: Full=50S ribosomal protein L29;[Corynebacterium accolens ATCC 49725] Length = 76 Score = 72.0 bits (175), Expect = 2e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQKATGQLTNNRRIGTVKRDIARIYTVLRERELGLSVAPG 73 >sp|A4XBN8|RL29_SALTO Tax_Id=369723 (rpmC)RecName: Full=50S ribosomal protein L29;[Salinispora tropica] Length = 78 Score = 70.9 bits (172), Expect = 4e-11 Identities = 32/45 (71%), Positives = 40/45 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPGE 74 FNLR Q ATGQL+NNRRL+ +R+EIAR+YT++RERELGL+A P E Sbjct: 30 FNLRVQAATGQLDNNRRLQVIRREIARIYTIMRERELGLSAAPTE 74 >tr|C2CPZ9|C2CPZ9_CORST Tax_Id=525268 (rpmC)SubName: Full=50S ribosomal protein L29;[Corynebacterium striatum ATCC 6940] Length = 76 Score = 70.9 bits (172), Expect = 4e-11 Identities = 33/44 (75%), Positives = 39/44 (88%) Query: 30 FNLRFQMATGQLNNNRRLRTVRQEIARVYTVLRERELGLAAGPG 73 FNLRFQ ATGQL NNRR+ TV+++IAR+YTVLRERELGL+ PG Sbjct: 30 FNLRFQKATGQLTNNRRIGTVKRDIARIYTVLRERELGLSVVPG 73 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.136 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 415,879,176 Number of extensions: 10132181 Number of successful extensions: 20229 Number of sequences better than 10.0: 1419 Number of HSP's gapped: 20268 Number of HSP's successfully gapped: 1419 Length of query: 80 Length of database: 3,846,993,858 Length adjustment: 51 Effective length of query: 29 Effective length of database: 3,271,958,505 Effective search space: 94886796645 Effective search space used: 94886796645 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 75 (33.5 bits)