BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1074 (248 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HCV8|B2HCV8_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 420 e-116 tr|A0PMA1|A0PMA1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 415 e-114 tr|Q7D9D3|Q7D9D3_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSER... 282 3e-74 tr|O53799|O53799_MYCBO Tax_Id=1765 (MBE50d)SubName: Full=PROBABL... 282 3e-74 tr|C6DUQ2|C6DUQ2_MYCTK Tax_Id=478434 SubName: Full=Conserved mem... 282 3e-74 tr|C1AL70|C1AL70_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 282 3e-74 tr|A5U0C2|A5U0C2_MYCTA Tax_Id=419947 SubName: Full=Putative cons... 282 3e-74 tr|A1KGL7|A1KGL7_MYCBP Tax_Id=410289 SubName: Full=Probable cons... 282 3e-74 tr|A5WKA4|A5WKA4_MYCTF Tax_Id=336982 SubName: Full=Conserved mem... 282 3e-74 tr|A4KF56|A4KF56_MYCTU Tax_Id=395095 SubName: Full=Conserved mem... 282 3e-74 tr|A2VG41|A2VG41_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 282 3e-74 tr|A0QKX7|A0QKX7_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 275 4e-72 tr|Q73S74|Q73S74_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 270 1e-70 tr|A3PVF8|A3PVF8_MYCSJ Tax_Id=164757 SubName: Full=Putative tran... 150 2e-34 tr|Q1BD70|Q1BD70_MYCSS Tax_Id=164756 SubName: Full=Putative tran... 149 4e-34 tr|A1UBS2|A1UBS2_MYCSK Tax_Id=189918 SubName: Full=Putative tran... 149 4e-34 tr|A1T4T5|A1T4T5_MYCVP Tax_Id=350058 SubName: Full=Putative tran... 144 1e-32 tr|A4TEE7|A4TEE7_MYCGI Tax_Id=350054 SubName: Full=Putative tran... 140 2e-31 tr|A0QSI1|A0QSI1_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 136 2e-30 tr|Q0SHA2|Q0SHA2_RHOSR Tax_Id=101510 SubName: Full=Possible memb... 112 3e-23 tr|C1AUM0|C1AUM0_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ... 107 1e-21 tr|Q5YN76|Q5YN76_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 105 5e-21 tr|A1SHA5|A1SHA5_NOCSJ Tax_Id=196162 SubName: Full=Putative memb... 102 4e-20 tr|C1RNL2|C1RNL2_9CELL Tax_Id=446466 SubName: Full=Putative unch... 94 2e-17 tr|A9WR01|A9WR01_RENSM Tax_Id=288705 (sigL)SubName: Full=RNA pol... 93 2e-17 tr|B1MAH4|B1MAH4_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 91 9e-17 tr|C1WIH4|C1WIH4_9ACTO Tax_Id=479435 SubName: Full=Putative unch... 89 3e-16 tr|B0RF43|B0RF43_CLAMS Tax_Id=31964 SubName: Full=Putative membr... 89 4e-16 tr|A3TIX9|A3TIX9_9MICO Tax_Id=313589 SubName: Full=Putative unch... 85 6e-15 tr|C5BVS1|C5BVS1_BEUC1 Tax_Id=471853 SubName: Full=Putative unch... 84 1e-14 tr|A5CMM7|A5CMM7_CLAM3 Tax_Id=443906 SubName: Full=Conserved mem... 81 9e-14 tr|A6W8Z8|A6W8Z8_KINRD Tax_Id=266940 SubName: Full=Putative unch... 76 4e-12 tr|C4RKS6|C4RKS6_9ACTO Tax_Id=219305 SubName: Full=Transmembrane... 76 4e-12 tr|C8XBN0|C8XBN0_NAKMY Tax_Id=479431 SubName: Full=Putative tran... 74 1e-11 tr|D1BRM1|D1BRM1_9MICO Tax_Id=446471 SubName: Full=Putative tran... 70 2e-10 tr|A0K1J3|A0K1J3_ARTS2 Tax_Id=290399 SubName: Full=Putative tran... 68 1e-09 tr|A8M604|A8M604_SALAI Tax_Id=391037 SubName: Full=Putative tran... 64 2e-08 tr|A1RAJ1|A1RAJ1_ARTAT Tax_Id=290340 SubName: Full=Putative unch... 61 1e-07 tr|A0LQX4|A0LQX4_ACIC1 Tax_Id=351607 SubName: Full=Putative tran... 60 2e-07 tr|C4DIQ9|C4DIQ9_9ACTO Tax_Id=446470 SubName: Full=Putative unch... 52 8e-05 tr|D1A4F9|D1A4F9_THECU Tax_Id=471852 SubName: Full=Putative unch... 51 1e-04 tr|C4ELZ2|C4ELZ2_STRRS Tax_Id=479432 SubName: Full=Putative unch... 51 1e-04 tr|C9N8Y6|C9N8Y6_9ACTO Tax_Id=591167 SubName: Full=Putative tran... 49 5e-04 tr|B5HDB9|B5HDB9_STRPR Tax_Id=457429 SubName: Full=Putative unch... 48 0.001 tr|Q9L1U2|Q9L1U2_STRCO Tax_Id=1902 SubName: Full=Putative membra... 47 0.002 tr|D1ACI7|D1ACI7_THECU Tax_Id=471852 SubName: Full=Putative tran... 47 0.002 tr|B8HHH4|B8HHH4_ARTCA Tax_Id=452863 SubName: Full=Putative tran... 46 0.003 tr|D1ADV1|D1ADV1_THECU Tax_Id=471852 SubName: Full=Putative tran... 46 0.003 tr|A0AVZ4|A0AVZ4_ARTS2 Tax_Id=290399 SubName: Full=Putative unch... 46 0.004 tr|B5HP01|B5HP01_9ACTO Tax_Id=463191 SubName: Full=RNA polymeras... 45 0.006 >tr|B2HCV8|B2HCV8_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 248 Score = 420 bits (1080), Expect = e-116 Identities = 217/248 (87%), Positives = 217/248 (87%) Query: 1 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG 60 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG Sbjct: 1 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG 60 Query: 61 VPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSS 120 VPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLP SS Sbjct: 61 VPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPTLLATVRWRRRRTRLAIWVASS 120 Query: 121 AAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC 180 AAAVF HSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC Sbjct: 121 AAAVFLGIGVLVGVVGHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC 180 Query: 181 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG 240 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG Sbjct: 181 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG 240 Query: 241 EVLLQRSL 248 EVLLQRSL Sbjct: 241 EVLLQRSL 248 >tr|A0PMA1|A0PMA1_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 248 Score = 415 bits (1067), Expect = e-114 Identities = 214/248 (86%), Positives = 216/248 (87%) Query: 1 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG 60 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG Sbjct: 1 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG 60 Query: 61 VPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSS 120 VPA+LSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLP S Sbjct: 61 VPAVLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPTLLATVRWRRRRTRLAIWVALS 120 Query: 121 AAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC 180 AAAVF HSASAPVQTASAQPMAQVGTHLLESTVSVDG+HWGTFINLRCVC Sbjct: 121 AAAVFLGIGVLVGAVGHSASAPVQTASAQPMAQVGTHLLESTVSVDGIHWGTFINLRCVC 180 Query: 181 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG 240 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG Sbjct: 181 LAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG 240 Query: 241 EVLLQRSL 248 EVLLQRSL Sbjct: 241 EVLLQRSL 248 >tr|Q7D9D3|Q7D9D3_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSERVED MEMBRANE PROTEIN; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|O53799|O53799_MYCBO Tax_Id=1765 (MBE50d)SubName: Full=PROBABLE CONSERVED MEMBRANE PROTEIN; SubName: Full=Putative uncharacterized protein MBE50d;[Mycobacterium bovis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|C6DUQ2|C6DUQ2_MYCTK Tax_Id=478434 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|C1AL70|C1AL70_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A5U0C2|A5U0C2_MYCTA Tax_Id=419947 SubName: Full=Putative conserved membrane protein;[Mycobacterium tuberculosis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A1KGL7|A1KGL7_MYCBP Tax_Id=410289 SubName: Full=Probable conserved membrane protein;[Mycobacterium bovis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A5WKA4|A5WKA4_MYCTF Tax_Id=336982 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A4KF56|A4KF56_MYCTU Tax_Id=395095 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A2VG41|A2VG41_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 250 Score = 282 bits (721), Expect = 3e-74 Identities = 157/251 (62%), Positives = 170/251 (67%), Gaps = 13/251 (5%) Query: 7 PVTGLGAP---------TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAE 57 P+ GLG P T +H Y MWDAAYVLG+LSAADRREFEAHLAGC CR AV E Sbjct: 4 PLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTE 63 Query: 58 LCGVPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXX 117 LCGVPALLSQL DEVAAI E + T + +S +LLP Sbjct: 64 LCGVPALLSQLDRDEVAAISE----SAPTVVASGLSPELLPSLLAAVHRRRRRTRLITWV 119 Query: 118 XSSAAAVFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLR 177 SSAAA HSA+ SA PMAQVGT LL STVS+ G WGTFINLR Sbjct: 120 ASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLR 179 Query: 178 CVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSA 237 CVCLAPP A HDTLAMVVVGRDGSQTRLATW+AEPGHTATPAGSIS PVDQIAAVQVV+A Sbjct: 180 CVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAA 239 Query: 238 DSGEVLLQRSL 248 D+G+VLLQRSL Sbjct: 240 DTGQVLLQRSL 250 >tr|A0QKX7|A0QKX7_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 239 Score = 275 bits (702), Expect = 4e-72 Identities = 156/249 (62%), Positives = 172/249 (69%), Gaps = 11/249 (4%) Query: 1 MDDIRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCG 60 MD++RTPV +G P E Y MWDAAYVLGSLSAA RREFE H+A C CR AVA++ G Sbjct: 1 MDEMRTPVHDVGPP---EDRYAMWDAAYVLGSLSAAQRREFEQHMAHCRGCREAVADISG 57 Query: 61 VPALLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSS 120 VPALLS+L DEVAAI E G A PQ+S+ LLP S+ Sbjct: 58 VPALLSRLDHDEVAAIDEAGPA-------PQLSADLLPSLLTAVRRRRRRGRVATWVASA 110 Query: 121 AAA-VFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCV 179 AAA V S A TASA+PMAQVGT LL STV V G HWGT INLRCV Sbjct: 111 AAAAVLAIGVFVGLEGWSSTPARQVTASAEPMAQVGTTLLTSTVQVSGQHWGTSINLRCV 170 Query: 180 CLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADS 239 CLAP +AHHDTLAMVVVGRDGS+TRLATWVA PGHTA+PAGSIS PVDQIAAVQVV+ADS Sbjct: 171 CLAPLNAHHDTLAMVVVGRDGSRTRLATWVAVPGHTASPAGSISTPVDQIAAVQVVAADS 230 Query: 240 GEVLLQRSL 248 G+VLLQRSL Sbjct: 231 GQVLLQRSL 239 >tr|Q73S74|Q73S74_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 236 Score = 270 bits (689), Expect = 1e-70 Identities = 154/246 (62%), Positives = 169/246 (68%), Gaps = 11/246 (4%) Query: 4 IRTPVTGLGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPA 63 +RTPV +G P E Y MWDAAYVLGSLSAA RREFE H+A C CR AVA++ GVPA Sbjct: 1 MRTPVHDVGPP---EDRYAMWDAAYVLGSLSAAQRREFEQHMAHCRGCREAVADISGVPA 57 Query: 64 LLSQLGADEVAAIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAA 123 LLS+L DEVAAI E G A PQ+S+ LLP S+AAA Sbjct: 58 LLSRLDHDEVAAIDEAGPA-------PQLSADLLPSLLTAVRRRRRRGRVATWVASAAAA 110 Query: 124 -VFXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLA 182 V S A TASA+PMAQVGT LL STV V G HWGT INLRCVCLA Sbjct: 111 AVLAIGVFVGLEGWSSTPARQVTASAEPMAQVGTTLLTSTVQVSGQHWGTSINLRCVCLA 170 Query: 183 PPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEV 242 P +AHHDTLAMVVVGRDGS+TRLATWVA PGHTA+PAGSIS PVDQIAAVQVV+ADSG+V Sbjct: 171 PLNAHHDTLAMVVVGRDGSRTRLATWVAVPGHTASPAGSISTPVDQIAAVQVVAADSGQV 230 Query: 243 LLQRSL 248 LLQRSL Sbjct: 231 LLQRSL 236 >tr|A3PVF8|A3PVF8_MYCSJ Tax_Id=164757 SubName: Full=Putative transmembrane anti-sigma factor;[Mycobacterium sp.] Length = 239 Score = 150 bits (378), Expect = 2e-34 Identities = 94/233 (40%), Positives = 124/233 (53%), Gaps = 5/233 (2%) Query: 20 PYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 PYL WDAAYVLGSLS+ADRREFEAH+ C CRAAVAEL G+PALLS L ADEV + Sbjct: 8 PYLQWDAAYVLGSLSSADRREFEAHMQTCDRCRAAVAELSGIPALLSMLDADEVDGQLD- 66 Query: 80 GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSA 139 G P++ +L ++ AV Sbjct: 67 GDEPEPPPLRPEVLDSVLDKVKWRRRRSRWMTSAAVGLAAAVLAVGLVIAIRPGAVGMQN 126 Query: 140 SAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCV----CLAPPDAHHDTLAMVV 195 P TA+ M ++ +TVS+ WGT I++ C P A L MVV Sbjct: 127 GTPEVTAATYEMTKLAPTPFNATVSLSDFGWGTRIDMACTYGQWSGGGPAAPPSRLGMVV 186 Query: 196 VGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 VGRDG+++ +ATW+ G TA P+G+ ++ D IAAVQ+VSAD+ EVLL+++L Sbjct: 187 VGRDGTRSEIATWLGLSGATALPSGNTTLHRDDIAAVQLVSADTREVLLEKTL 239 >tr|Q1BD70|Q1BD70_MYCSS Tax_Id=164756 SubName: Full=Putative transmembrane anti-sigma factor;[Mycobacterium sp.] Length = 239 Score = 149 bits (375), Expect = 4e-34 Identities = 93/233 (39%), Positives = 124/233 (53%), Gaps = 5/233 (2%) Query: 20 PYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 PYL WDAAYVLGSLS+ADRREFEAH+ C CRAAVAEL G+PALLS L ADEV + Sbjct: 8 PYLQWDAAYVLGSLSSADRREFEAHMQTCDRCRAAVAELSGIPALLSMLDADEVDGQLD- 66 Query: 80 GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSA 139 G P++ +L ++ AV Sbjct: 67 GDEPEPPPLRPEVLDSVLDKVKWRRRRSRWMTSAAVGLAAAVLAVGLVIAIRPGAVGMQN 126 Query: 140 SAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCV----CLAPPDAHHDTLAMVV 195 P TA+ M ++ +TVS+ WGT I++ C P A L MVV Sbjct: 127 GTPEVTAATYEMTKLAPTPFNATVSLSDFGWGTRIDMACTYGQWSGGGPAAPPSRLGMVV 186 Query: 196 VGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 VGRDG+++ +ATW+ G TA P+G+ ++ D IAAVQ+V+AD+ EVLL+++L Sbjct: 187 VGRDGTRSEIATWLGLSGATALPSGNTTLHRDDIAAVQLVAADTREVLLEKTL 239 >tr|A1UBS2|A1UBS2_MYCSK Tax_Id=189918 SubName: Full=Putative transmembrane anti-sigma factor;[Mycobacterium sp.] Length = 239 Score = 149 bits (375), Expect = 4e-34 Identities = 93/233 (39%), Positives = 124/233 (53%), Gaps = 5/233 (2%) Query: 20 PYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 PYL WDAAYVLGSLS+ADRREFEAH+ C CRAAVAEL G+PALLS L ADEV + Sbjct: 8 PYLQWDAAYVLGSLSSADRREFEAHMQTCDRCRAAVAELSGIPALLSMLDADEVDGQLD- 66 Query: 80 GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSA 139 G P++ +L ++ AV Sbjct: 67 GDEPEPPPLRPEVLDSVLDKVKWRRRRSRWMTSAAVGLAAAVLAVGLVIAIRPGAVGMQN 126 Query: 140 SAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCV----CLAPPDAHHDTLAMVV 195 P TA+ M ++ +TVS+ WGT I++ C P A L MVV Sbjct: 127 GTPEVTAATYEMTKLAPTPFNATVSLSDFGWGTRIDMACTYGQWSGGGPAAPPSRLGMVV 186 Query: 196 VGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 VGRDG+++ +ATW+ G TA P+G+ ++ D IAAVQ+V+AD+ EVLL+++L Sbjct: 187 VGRDGTRSEIATWLGLSGATALPSGNTTLHRDDIAAVQLVAADTREVLLEKTL 239 >tr|A1T4T5|A1T4T5_MYCVP Tax_Id=350058 SubName: Full=Putative transmembrane anti-sigma factor;[Mycobacterium vanbaalenii] Length = 238 Score = 144 bits (362), Expect = 1e-32 Identities = 87/235 (37%), Positives = 125/235 (53%), Gaps = 14/235 (5%) Query: 21 YLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPG 80 Y WDAAYVLG+L+ DRRE+EAHL GC C +AVAEL G+P LL+ L DEV+A+ + Sbjct: 11 YRTWDAAYVLGALAGDDRREYEAHLTGCDRCHSAVAELSGIPGLLAMLDLDEVSALDD-- 68 Query: 81 VAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHS-- 138 P + ++L +AAAV + Sbjct: 69 -----AQPDPPLRPEVLTSVLDRVSARRRRARWWTTTALAAAAVLLAVALVLAIRPATFG 123 Query: 139 ---ASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC--LAPPDAHHDTLAM 193 + TA Q MA+V + +++++ G WGT I++ C DA L M Sbjct: 124 LGTGTESPPTAQMQEMAKVSETPINASIALTGYGWGTRIDMACSYGDWGRRDAPPQNLGM 183 Query: 194 VVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 VV+G DGS++ +ATW+ G TA P+G+ MP+DQIAAVQ+VS+ G+VLL+++L Sbjct: 184 VVIGDDGSRSEIATWLGLSGATALPSGTTPMPLDQIAAVQLVSSPDGKVLLEKNL 238 >tr|A4TEE7|A4TEE7_MYCGI Tax_Id=350054 SubName: Full=Putative transmembrane anti-sigma factor;[Mycobacterium gilvum] Length = 234 Score = 140 bits (352), Expect = 2e-31 Identities = 90/239 (37%), Positives = 122/239 (51%), Gaps = 15/239 (6%) Query: 15 TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVA 74 T +H Y WDAAYVLG+LS DRRE+E HL+GC CR+AVAEL G+P LLS L DEV Sbjct: 2 TSADH-YRTWDAAYVLGALSTDDRREYEGHLSGCGGCRSAVAELDGMPGLLSLLDLDEVI 60 Query: 75 AIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXX 134 A+ A P + ++L + AA Sbjct: 61 ALDHEQPA-------PPLRPEVLTSVIDRMGARRRRARRATVWAVAVAAALLALAIVLAV 113 Query: 135 XXH---SASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC----LAPPDAH 187 S QTA Q MA+V + +++++ G WGT I++ C P Sbjct: 114 RPAIFGSDGGGEQTAPMQNMAKVSETPINASIALTGYGWGTRIDMACSYGDWGQNPRGTP 173 Query: 188 HDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQR 246 L MVV+G DGS++++ATW+ G TA P+G+ M VD+I AVQ+VSA GEVLL++ Sbjct: 174 PQNLGMVVIGHDGSRSQIATWLGLSGATALPSGTTPMQVDEIRAVQLVSASDGEVLLEK 232 >tr|A0QSI1|A0QSI1_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 243 Score = 136 bits (343), Expect = 2e-30 Identities = 87/235 (37%), Positives = 121/235 (51%), Gaps = 15/235 (6%) Query: 21 YLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAI-GEP 79 Y WDAAYVLGSLS+ +RRE+EAHL C CRA VAEL G+PALLS + D+V AI GE Sbjct: 17 YSTWDAAYVLGSLSSEERREYEAHLTTCPQCRAGVAELSGMPALLSLIDLDDVRAIDGE- 75 Query: 80 GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHS- 138 P + ++L ++ AAV + Sbjct: 76 -------QPDPPLRPEVLDSVMAEVGARRRRTRWLTTSVAALAAVLLAVGIVVLARPEAF 128 Query: 139 ---ASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVC--LAPPDAHHDTLAM 193 QTA M++V + +++++ G WGT I++ C A L M Sbjct: 129 GLQRGTEQQTAQMLEMSKVAQTPINASIALTGYTWGTRIDMACSYGDWGSKGAQPQDLGM 188 Query: 194 VVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 VVVGRDGS+ ++ATW+ G TA P+G+ P+D IAA+Q+VS G+VLL++ L Sbjct: 189 VVVGRDGSREQVATWLGLSGATALPSGNTQKPMDDIAAIQMVSVADGKVLLEKKL 243 >tr|Q0SHA2|Q0SHA2_RHOSR Tax_Id=101510 SubName: Full=Possible membrane protein;[Rhodococcus sp.] Length = 252 Score = 112 bits (281), Expect = 3e-23 Identities = 85/248 (34%), Positives = 115/248 (46%), Gaps = 22/248 (8%) Query: 18 EHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIG 77 E PY WDAAYVLG++S +DRRE+EAHLA CA C AV+EL G+P LL+ + +E A G Sbjct: 10 EDPYARWDAAYVLGAMSPSDRREYEAHLAHCAQCSQAVSELAGMPGLLALITPEE--AFG 67 Query: 78 E-PGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXX 136 PG AA S +P + + ++AAAV Sbjct: 68 TLPGNAAPADSETP---APRVLTHLVGTVERRRRHRRAATALAAAAAVIAVAVPVGVLVT 124 Query: 137 HSASAPVQTAS------AQPMAQVGTHLLESTV----SVDGMHWGTFINLRCVC--LAPP 184 + P + A V T ++ +T+ SV + WGT I + C P Sbjct: 125 QDRTPPAPVTAMPVPDRANTTEAVFTPVVPTTITASASVASVSWGTVIFVECSYEDTWPG 184 Query: 185 DAHH----DTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSG 240 D + + A+ V R G T LATW E G T P + S+PVD I ++ V S D Sbjct: 185 DGRYGADTEGYALTVTDRSGVVTTLATWTGEAGTTVRPTATTSLPVDAIVSIDVRSDDDH 244 Query: 241 EVLLQRSL 248 EVLL +L Sbjct: 245 EVLLTAAL 252 >tr|C1AUM0|C1AUM0_RHOOB Tax_Id=632772 SubName: Full=Hypothetical membrane protein;[Rhodococcus opacus] Length = 252 Score = 107 bits (267), Expect = 1e-21 Identities = 80/247 (32%), Positives = 113/247 (45%), Gaps = 20/247 (8%) Query: 18 EHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEV-AAI 76 E PY+ WDAAYVLG++S ADRRE+EAHL CA C AV+EL G+P LL+ + +E + Sbjct: 10 EDPYVRWDAAYVLGAMSGADRREYEAHLTHCAQCSQAVSELAGMPGLLALITPEEAFGTL 69 Query: 77 GEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXX 136 G + +P++ + L+ A AV Sbjct: 70 SGNGAPVDEETPAPRVLTGLVGAVQQRRRHRRAATALAAAAAVIAVAV---PVGVLATQD 126 Query: 137 HSASAPVQTASAQP---------MAQVGTHLLESTVSVDGMHWGTFINLRCVC--LAPPD 185 + +APV TA P A V + ++ SV +GT I + C P D Sbjct: 127 RTPAAPV-TALPAPDRANTTEAVFAPVVPTTITASASVVSTSFGTVIFVECSYEDTWPGD 185 Query: 186 AHH----DTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGE 241 + + A+ V R G T +ATW E G T P + S+PVD IA++ V S D + Sbjct: 186 GRYGAATEGYALTVTDRSGVATTVATWTGEAGQTVRPTATTSLPVDAIASIDVRSEDDYQ 245 Query: 242 VLLQRSL 248 VLL +L Sbjct: 246 VLLSTAL 252 >tr|Q5YN76|Q5YN76_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 235 Score = 105 bits (262), Expect = 5e-21 Identities = 75/237 (31%), Positives = 106/237 (44%), Gaps = 14/237 (5%) Query: 15 TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVA 74 TE Y WDAAYVLG+L +A+RRE+E HLAGC CRAAV EL G+P +L+ + AD Sbjct: 2 TEIADDYTTWDAAYVLGALGSAERREYEEHLAGCPECRAAVTELAGLPGMLALVDADTAE 61 Query: 75 AIGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXX 134 A+ + AG + LLP + A A Sbjct: 62 AM----IGAGEEQAPAPAAPDLLPTLAAAAERRRRRSRWVAVGAALAGAAAAVAIAVPVL 117 Query: 135 XXHSASAPVQTASAQPMAQVGTHLLEST-------VSVDGMHWGTFINLRCVCLAPPDAH 187 AP TA Q +A+ +E T + DG T + + C A A+ Sbjct: 118 AGREQPAPPVTAE-QVLAERSMSPVEPTPIAASFRLLADGDR--TRVVMTCDYGAGEQAY 174 Query: 188 HDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLL 244 + V+G DGS+ L W A PG + T S+ + +Q+ V++ SA++ VLL Sbjct: 175 TRRYRLAVIGADGSRVDLGEWPAGPGTSLTVDSSVDLAPEQVRRVEITSAETNRVLL 231 >tr|A1SHA5|A1SHA5_NOCSJ Tax_Id=196162 SubName: Full=Putative membrane protein;[Nocardioides sp.] Length = 239 Score = 102 bits (254), Expect = 4e-20 Identities = 73/231 (31%), Positives = 103/231 (44%), Gaps = 24/231 (10%) Query: 25 DAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGAD--EVAAIGEPGVA 82 D AYVLG+L+ +R EFE HL GC C +V +L G+P LLSQ+ + E A + EP Sbjct: 17 DGAYVLGALAPEERLEFERHLRGCKDCARSVQQLAGLPGLLSQVSVEVLESAPVDEP--- 73 Query: 83 AGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHS---- 138 + LLP ++AA V + Sbjct: 74 ---------VPDTLLPALVREVRRGRRRRRWLTGLAAAAAVVVVGAASVAVVTTNDGDGA 124 Query: 139 -ASAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAHHD-----TLA 192 + P +ASA+ M VG + +S+ + WGT + L C AP D ++ T Sbjct: 125 PVAVPTASASAREMTPVGADGVTGWLSMTSVAWGTRLELTCTYQAPTDGYYQQAGPPTYE 184 Query: 193 MVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVL 243 +VV RDG ++A+W PG T T G+ + V I +VQV SAD VL Sbjct: 185 LVVRTRDGGVEQVASWRGLPGRTLTITGATAASVADIVSVQVRSADGHPVL 235 >tr|C1RNL2|C1RNL2_9CELL Tax_Id=446466 SubName: Full=Putative uncharacterized protein;[Cellulomonas flavigena DSM 20109] Length = 262 Score = 93.6 bits (231), Expect = 2e-17 Identities = 73/245 (29%), Positives = 108/245 (44%), Gaps = 33/245 (13%) Query: 20 PYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGA-DEVAAIGE 78 PY WDAAYVLG+L +RR++EAHLA C +CR AV EL G+P LL Q+ A D VA+ Sbjct: 5 PYREWDAAYVLGALPPGERRDYEAHLATCDACRTAVGELAGLPGLLGQVPAQDAVASEDA 64 Query: 79 PGVAAGTTSGSPQMS----------------------SQLLPXXXXXXXXXXXXXXXXXX 116 G A G T P + ++P Sbjct: 65 SGQAPGATGPGPGRDRGRVPHVRAVGPSDTPPADAPPADVVPLASLAQEVRRRRARRRLA 124 Query: 117 XXSSAAAVFXXXXXXXXXXXHSASAPVQTASAQ----PMAQVGTHLLESTVSVDGMHWGT 172 +AAA+ AP +A +A VG + + V++ WGT Sbjct: 125 LAGAAAALVVLAGVAGAAVTGGLGAPPAVVAADARTVALAPVGGSGVSADVTIAPARWGT 184 Query: 173 FINLRCVCLAP--PDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATP-AGSISMPVDQI 229 ++ C A P+ ++ +V+VG DG ++ +ATW + TA+ S ++PVD I Sbjct: 185 RLDWSCAYEAAVLPEGVYE---LVLVGADGERSVVATWTSTGERTASGLQASSALPVDGI 241 Query: 230 AAVQV 234 A V++ Sbjct: 242 ARVEL 246 >tr|A9WR01|A9WR01_RENSM Tax_Id=288705 (sigL)SubName: Full=RNA polymerase sigma factor;[Renibacterium salmoninarum] Length = 413 Score = 93.2 bits (230), Expect = 2e-17 Identities = 77/253 (30%), Positives = 112/253 (44%), Gaps = 37/253 (14%) Query: 15 TEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVA 74 T+ WDAAYVLG+LS A+R EFE HL+ CA C A+VAEL G+P +L+ L A A Sbjct: 179 TDHNDSLAQWDAAYVLGALSPAERHEFEIHLSSCARCAASVAELAGMPGILAALPA---A 235 Query: 75 AIGEPGVAAGTTSGSP-QMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXX 133 A E A + P Q S+ +LP A A Sbjct: 236 AQAE---ALLRSEAEPVQASANVLPMLARRARKSKVRRRLMTVAAGIAVAAA-------- 284 Query: 134 XXXHSASAPVQTASAQPMAQVGTHLLE--------STVSVDG----MHWGTFINLRCVCL 181 + + V A P++QV + + V+V G + WGT I RC Sbjct: 285 ----ATTVTVVALPASPISQVQANAVPLNFSAIDAQPVTVSGKALPVSWGTQIEWRCSYA 340 Query: 182 APPDAHHDT------LAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVV 235 A T +VVV R+G +T A+W + G +P +I P+ +I+ ++V Sbjct: 341 ASQSTPGYTGGASTPFQLVVVDRNGKETVAASWDSSDGSVVSPVTTIDTPLTEISKIEVR 400 Query: 236 SADSGEVLLQRSL 248 A+SG+V++ L Sbjct: 401 WANSGKVVVSAKL 413 >tr|B1MAH4|B1MAH4_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 249 Score = 91.3 bits (225), Expect = 9e-17 Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 16/232 (6%) Query: 18 EHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQL--GADEVAA 75 EH Y WDAAYVLG+LS+ +RRE+E HL C SC+ A++E+ +P LLS++ G E Sbjct: 4 EHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAEKME 63 Query: 76 IGEPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXX 135 + +P V A + P + L P + AA Sbjct: 64 LEDPPVLAKPATSCPVQA--LWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPPP 121 Query: 136 XHSASAPVQTASA--------QPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAH 187 + AP+ A+ QPM QV L + V++ GT I + C D Sbjct: 122 WYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALVRDGTGTRIEMWCSYPVYGDDA 181 Query: 188 HDTLAMVVVGRDGSQTR----LATWVAEPGHTATPAGSISMPVDQIAAVQVV 235 D+ A R G++T ++W A+PG T + ++ M DQI ++QV+ Sbjct: 182 DDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVI 233 >tr|C1WIH4|C1WIH4_9ACTO Tax_Id=479435 SubName: Full=Putative uncharacterized protein;[Kribbella flavida DSM 17836] Length = 220 Score = 89.4 bits (220), Expect = 3e-16 Identities = 71/235 (30%), Positives = 95/235 (40%), Gaps = 40/235 (17%) Query: 24 WDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAA 83 WDAAYVLG+LSA +RRE+E HL CA C A VA L VP L+ L D A +P Sbjct: 8 WDAAYVLGALSAQERREYEEHLRTCAECSAEVAALQSVPDSLAMLPEDRALATLDP---- 63 Query: 84 GTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSASAPV 143 LLP +A A + +A + Sbjct: 64 --------TPPDLLPGLARAVERDRRRRRFRVAGLVAATA--------------ATAAAI 101 Query: 144 QTASAQPMAQ--------VGTHLLESTVSVDGM----HWGTFINLRCVC--LAPPDAHHD 189 A P+A+ V + S +S D WGT I + C LA P Sbjct: 102 GAVVAGPLARDEPEGEYVVLAQTVASKLSADARLVEERWGTTIEISCRYDDLATPSERAR 161 Query: 190 TLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLL 244 + V R G T +A W A PG T PA + + +I A+ + S+D+G +LL Sbjct: 162 GYDLYVTDRSGKSTLIANWTASPGTTVRPAATTKLHKSEIRALDIRSSDTGRILL 216 >tr|B0RF43|B0RF43_CLAMS Tax_Id=31964 SubName: Full=Putative membrane protein;[Clavibacter michiganensis subsp. sepedonicus] Length = 265 Score = 89.0 bits (219), Expect = 4e-16 Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 32/256 (12%) Query: 24 WDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAA 83 WDAAYVLGSLSA DR FEAHL GC +C ++AEL G+P +L L DE A+ + A Sbjct: 11 WDAAYVLGSLSATDRALFEAHLEGCDACMRSLAELSGLPGVLRMLPVDEAIALMDEPEAP 70 Query: 84 GTTSGSPQ-------MSSQLLP-----XXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXX 131 +P+ + +P ++A + Sbjct: 71 AVPQPAPEPRERPSAAAGHRVPRRRRRPLSAPARLPVSRRTGGWILVAAALVLLVGGAGL 130 Query: 132 XXXXXHSASAP-------VQTASAQPMAQVGTHL------------LESTVSVDGMHWGT 172 SAP V + SA P + G + + ++V WGT Sbjct: 131 GSALRAGVSAPVADPAPSVTSPSADPSSSTGLPADAVSMRSELDEGVTAQLAVTAKPWGT 190 Query: 173 FINLRCVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAV 232 + C A A +V + DG++T +ATW A A + S+P+++I V Sbjct: 191 RFDWSC-AYAGGGARKGAYDLVAIADDGTRTIVATWGAGQAEATQLAATSSLPIERIREV 249 Query: 233 QVVSADSGEVLLQRSL 248 Q+ +DS VL R L Sbjct: 250 QITPSDSDVVLASRDL 265 >tr|A3TIX9|A3TIX9_9MICO Tax_Id=313589 SubName: Full=Putative uncharacterized protein;[Janibacter sp. HTCC2649] Length = 236 Score = 85.1 bits (209), Expect = 6e-15 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 12/232 (5%) Query: 25 DAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAG 84 D +YVLG+LS +R EFE HLA CA C +V EL G+P LL+Q+ ++ P V A Sbjct: 9 DGSYVLGALSPTERLEFERHLASCAECSQSVRELAGIPGLLAQVDLSDIEDGSVPPVPAT 68 Query: 85 TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSASAP-- 142 P + S++ A AV SA+ P Sbjct: 69 LL---PSLVSEVRSAERRRSVWVGAIAASVAAVAGGALAVATGLGGGEQPLVASAATPTV 125 Query: 143 --VQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPD----AHHDTLAMVVV 196 TAS M VG+ + + V++ G+ WGT + + C D H + V Sbjct: 126 SATSTASKLHMESVGSSPISADVALAGVAWGTRLEMTCSYGEGEDDYEAIHGWVYGLFVQ 185 Query: 197 GRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLLQRSL 248 RDG ++ATW PG T + + + I V+ V G V+L+ S+ Sbjct: 186 TRDGRFEQVATWKGLPGRTMNLQAATAAQREDIQRVE-VRTSGGVVVLRLSV 236 >tr|C5BVS1|C5BVS1_BEUC1 Tax_Id=471853 SubName: Full=Putative uncharacterized protein;[Beutenbergia cavernae] Length = 259 Score = 84.3 bits (207), Expect = 1e-14 Identities = 69/249 (27%), Positives = 100/249 (40%), Gaps = 24/249 (9%) Query: 21 YLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPG 80 Y WD+AYVLG+L+ A+R E+E HLAGCA CRAAV EL G+P LL L ADE A+ +P Sbjct: 7 YADWDSAYVLGALAPAERDEYERHLAGCADCRAAVGELAGLPGLLGALPADEALALVDPD 66 Query: 81 VA--------------AGTTSG---SPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAA 123 A A TT G SP + + + A Sbjct: 67 DAGSEDAARGSDAARPAATTGGAVASPGLGPTVPLGPLVERVRRGRRRRRLAAVVGACAG 126 Query: 124 VFXXXXXXXXXXXHSASAPVQT-ASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLA 182 V AP + + AQ L ++ + GT I+ C + Sbjct: 127 VAAVVALLLAVVVPGLRAPQEVDVTFATTAQAQGAPLSASAQLAARDGGTRISSTCSYGS 186 Query: 183 PPDAHHD------TLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVS 236 D + V DG+ ++++W A PG T G +P+ IA + + Sbjct: 187 SGYGDVDGGGPARVFGLYVTDADGAVEQVSSWTAAPGDTIEATGWTDLPLGAIAELDIRE 246 Query: 237 ADSGEVLLQ 245 + + LL+ Sbjct: 247 VGAPDALLR 255 >tr|A5CMM7|A5CMM7_CLAM3 Tax_Id=443906 SubName: Full=Conserved membrane protein;[Clavibacter michiganensis subsp. michiganensis] Length = 263 Score = 81.3 bits (199), Expect = 9e-14 Identities = 69/254 (27%), Positives = 102/254 (40%), Gaps = 30/254 (11%) Query: 24 WDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADE-VAAIGEP--- 79 WDAAYVLGSLSA DR FEAHL GC +C ++AEL G+P +L L +E +A + EP Sbjct: 11 WDAAYVLGSLSATDRALFEAHLEGCDACMRSLAELSGLPGVLRMLPVEEAIALMDEPEAP 70 Query: 80 ----GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXX 135 VA + ++ + ++A + Sbjct: 71 AVPQPVAPAQDAPGHRVPRRRRRPLAGGARPPLSRRTGGWILAAAAVVLLVGGAGLGSAL 130 Query: 136 XHSASAPV-------QTASAQPMAQVGTHLLESTVSVDG--------------MHWGTFI 174 S PV +A+ P + L VS+ WGT Sbjct: 131 RAGVSGPVADPSPASSSAAGDPSGDLSEGLPADAVSMRSDLDEGVTAKLALTPQPWGTRF 190 Query: 175 NLRCVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQV 234 + C A +V + DG++T +A+W A + A + S+P+D+I VQ+ Sbjct: 191 DWSCE-YAGGGVGQGAYDLVAIEDDGTRTVVASWGAGQAESRLLAATSSLPMDRIRTVQI 249 Query: 235 VSADSGEVLLQRSL 248 +DS VL R L Sbjct: 250 TPSDSDVVLASRDL 263 >tr|A6W8Z8|A6W8Z8_KINRD Tax_Id=266940 SubName: Full=Putative uncharacterized protein;[Kineococcus radiotolerans] Length = 258 Score = 75.9 bits (185), Expect = 4e-12 Identities = 66/248 (26%), Positives = 95/248 (38%), Gaps = 22/248 (8%) Query: 18 EHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIG 77 + P+ YVLG+L+ A+R FE HL C CR AV L G+P LLS+ D V A+G Sbjct: 6 DDPFATTAGPYVLGALAPAERSAFETHLRTCPDCRHAVEGLAGLPGLLSRTPRDVVDALG 65 Query: 78 EPGVAAGTTS---GSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXX 134 AA G + +LP AA Sbjct: 66 REDPAAALRERGLGEDAVPDTVLPALLRAVRRRRTTRRAALVGGLGLAAALAGAFAWSGG 125 Query: 135 XXHSASAP--------VQTASAQPMAQVGTHLLE-----------STVSVDGMHWGTFIN 175 + + P +SA P A G ++ +TV + + WGT ++ Sbjct: 126 DPSAPAVPSALPGAPSSAPSSAGPGASPGPGRVQAMDPLLPVPVTATVQLTEVGWGTQVD 185 Query: 176 LRCVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVV 235 L C A+VV G+ ++ TW A PG A +G+ S QIA+V+V Sbjct: 186 LVCAYAHAEAEQPHPYALVVSDTAGATQQIGTWTALPGRDAQLSGATSWTRAQIASVEVR 245 Query: 236 SADSGEVL 243 + VL Sbjct: 246 TLSGTTVL 253 >tr|C4RKS6|C4RKS6_9ACTO Tax_Id=219305 SubName: Full=Transmembrane anti-sigma factor;[Micromonospora sp. ATCC 39149] Length = 383 Score = 75.9 bits (185), Expect = 4e-12 Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 19/223 (8%) Query: 25 DAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAG 84 D AYVLG+L+ ADR +E HLAGCASCR AVAE+ +P LL +L + EP Sbjct: 10 DGAYVLGALAPADRAAYERHLAGCASCRDAVAEIAVLPGLLGRLDPAGLEQFLEPPAEIS 69 Query: 85 TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSA----- 139 LL + AAAV A Sbjct: 70 RVPA-------LLDAARRHRRRERSAARRRYALTALAAAVLALLAGFGTATLRPAVEVTP 122 Query: 140 --SAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAHHD--TLAMVV 195 + V AS +P+A GT + + V + G WGT + +RC H + T +V Sbjct: 123 TPTPQVALASMRPVA--GTVPVHAEVGLTGTPWGTEVTMRC-GYDRRAGHREAYTFRLVA 179 Query: 196 VGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSAD 238 G DG+ ++ +W+A PG + ++ ++++ AD Sbjct: 180 HGPDGATEQIGSWLAAPGDELRLNATTHFTDGELVRLELLRAD 222 >tr|C8XBN0|C8XBN0_NAKMY Tax_Id=479431 SubName: Full=Putative transmembrane anti-sigma factor;[Nakamurella multipartita] Length = 247 Score = 73.9 bits (180), Expect = 1e-11 Identities = 67/239 (28%), Positives = 98/239 (41%), Gaps = 30/239 (12%) Query: 25 DAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAG 84 DAAYVLG+LSAADRR +E HL C +C+A+V L G+P LL+ L A + +P V Sbjct: 15 DAAYVLGALSAADRRAYEEHLRECQTCQASVRRLAGMPGLLA-LAAPDAIGDADPPV--- 70 Query: 85 TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVF-----XXXXXXXXXXXHSA 139 P + LL ++A AV +SA Sbjct: 71 ----PPSLLPTLLRRARRADRRRRRLVGGVVGGLAAATAVLLVVLVWAIARPGAAPTNSA 126 Query: 140 SAPVQTASAQ--------------PMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPD 185 A T+++ P+ QV + +T+ +D WGT I + VC Sbjct: 127 DAGTSTSASAGSSAGPIAAPDETVPLDQVLPGPMTATLELDDKRWGTAITV--VCSYEQS 184 Query: 186 AHHDT-LAMVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVL 243 + VV DG T +W PG TA + ++ D I+A ++ AD +L Sbjct: 185 MRGSVPYDLAVVDTDGQVTSAGSWSGVPGVTARVPVATAVTRDHISAFEIRLADGRTIL 243 >tr|D1BRM1|D1BRM1_9MICO Tax_Id=446471 SubName: Full=Putative transmembrane anti-sigma factor;[Xylanimonas cellulosilytica DSM 15894] Length = 273 Score = 70.5 bits (171), Expect = 2e-10 Identities = 66/269 (24%), Positives = 96/269 (35%), Gaps = 41/269 (15%) Query: 21 YLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP- 79 Y WDAAYVLG+L A+RRE+ AHL C +CR AVAE+ +P LL+ + AD + P Sbjct: 5 YAHWDAAYVLGALGPAERREYAAHLTACEACRTAVAEIAALPGLLASVPADLLPVDAPPT 64 Query: 80 -----------------GVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAA 122 G A GS + ++P + A Sbjct: 65 AGPPAAALPVGGGPDASGARAAAGPGSAARAGDVVPFARVAAAARRSRRRRRAGLVAVAT 124 Query: 123 AV-FXXXXXXXXXXXHSASAPVQTASAQPMAQVGTHLLE-STVSVDGM---------HWG 171 + S S P A GT L+ + V GM WG Sbjct: 125 VIAVGGVLAGSALSPGSESGPTTPTPTSSAAVAGTVTLQLAPVGDTGMWADLVATPTPWG 184 Query: 172 TFINLRC------VCLAPPDAHHD------TLAMVVVGRDGSQTRLATWVAEPGHTATPA 219 T + C PD + T +V+V R G++ ATW Sbjct: 185 TSLAWSCRYERQAGAADGPDGGYGGGPEPVTYELVLVDRTGARIVAATWTTADQEATGLG 244 Query: 220 GSISMPVDQIAAVQVVSADSGEVLLQRSL 248 S ++P+ + +++ A E L +L Sbjct: 245 ASSALPLSSLERIEIAIAGRPEPLAAATL 273 >tr|A0K1J3|A0K1J3_ARTS2 Tax_Id=290399 SubName: Full=Putative transmembrane anti-sigma factor;[Arthrobacter sp.] Length = 235 Score = 67.8 bits (164), Expect = 1e-09 Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 11/211 (5%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAGTT 86 AY+LG L AD FE HLAGC CR + EL +PALL L + A+ P AA Sbjct: 12 AYLLGGLEQADVSRFEQHLAGCPDCRRELDELASLPALLDALPVADAVALAGPAPAA--- 68 Query: 87 SGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSASAPVQTA 146 +P+ ++ + A F +AP+ Sbjct: 69 -AAPEATALGVVASAAEPAALLDELAVRRRKSRRRWAAFVGAVAAACLAVGVLAAPLFNQ 127 Query: 147 SAQPMAQVGTHL---LESTVSVDGMHWGTFINLRCVCLAPPDAHHDTLAMVVVGRDGSQT 203 +P A L+ +++ WGT ++ L TL++ V G+DG++ Sbjct: 128 PPRPDASYSVEAPGGLQVQLALIKKAWGTEVSFSGTSLPT----QGTLSLWVKGQDGTED 183 Query: 204 RLATWVAEPGHTATPAGSISMPVDQIAAVQV 234 R +W A PG + G+ + +I++V++ Sbjct: 184 RACSWSATPGGRSRITGATPTQISRISSVEL 214 >tr|A8M604|A8M604_SALAI Tax_Id=391037 SubName: Full=Putative transmembrane anti-sigma factor;[Salinispora arenicola] Length = 230 Score = 63.5 bits (153), Expect = 2e-08 Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 19/227 (8%) Query: 25 DAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAG 84 D AYVLG+L+ A R +E HLAGC C AVAE+ +P LL +L ++ P Sbjct: 10 DGAYVLGALAPAQRAAYERHLAGCTECGHAVAEIAVLPGLLGRLDPADLDRFVPP----- 64 Query: 85 TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAV-----FXXXXXXXXXXXHSA 139 ++S L +AAAV Sbjct: 65 --PADSRLSGLLAAAGEHRHRERRATRRRYARTTLAAAAVALVVGLGTAAVWPEQPTTDP 122 Query: 140 SAPVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAHHD---TLAMVVV 196 + V+ + +P+A G + + + + G WGT + +RC A +D +V Sbjct: 123 AGGVEMVAMRPVA--GAVPVYAEIGLVGTAWGTRVAMRCGYNA--GTGYDGARPFRLVAH 178 Query: 197 GRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVL 243 G DG+ +L +W+A PG +G+ ++ +++V D +L Sbjct: 179 GPDGATEQLGSWLAAPGDDLRISGATRFTDAELVRLELVRLDGTTIL 225 >tr|A1RAJ1|A1RAJ1_ARTAT Tax_Id=290340 SubName: Full=Putative uncharacterized protein;[Arthrobacter aurescens] Length = 224 Score = 61.2 bits (147), Expect = 1e-07 Identities = 54/211 (25%), Positives = 79/211 (37%), Gaps = 15/211 (7%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAGTT 86 AY+LG L + R FE HLA CA CR + EL +PALL + A + A+ T Sbjct: 12 AYLLGGLEPGEARTFEDHLAQCAECRNQLEELASLPALLDAVPAADAVAL--------TV 63 Query: 87 SGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXXXHSASAPVQTA 146 +GS S L P A + P+ Sbjct: 64 AGSTNALSPLEPIPATLPEKVLVDLSARRRKSRRRWAALVGAVAAACLAIGVLAGPLLNQ 123 Query: 147 SAQPMAQVGTHL---LESTVSVDGMHWGTFINLRCVCLAPPDAHHDTLAMVVVGRDGSQT 203 +P A L+ TV + +WGT + + + TL + V GRDG++ Sbjct: 124 PPKPDASYSVQSGDGLQLTVGMVKKNWGTELEVEGRSM----PLEGTLYLWVKGRDGAEE 179 Query: 204 RLATWVAEPGHTATPAGSISMPVDQIAAVQV 234 R W A P G+ + + IA V++ Sbjct: 180 RTCGWTATPSGRIKITGATPVQLAGIAGVEL 210 >tr|A0LQX4|A0LQX4_ACIC1 Tax_Id=351607 SubName: Full=Putative transmembrane anti-sigma factor;[Acidothermus cellulolyticus] Length = 223 Score = 60.5 bits (145), Expect = 2e-07 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 21/220 (9%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAGTT 86 +YVLG+L +R + EAH++ CA CR +A L +P LL+++ EV T Sbjct: 14 SYVLGALDPGERGQVEAHVSSCADCRDELASLAALPGLLARVSLPEV------------T 61 Query: 87 SGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSA-AAVFXXXXXXXXXXXH-SASAPVQ 144 + + + LLP ++A AV H S+ + Sbjct: 62 ATPADVDAALLPRLLARVTAVRRRRRARWLISTAAGVAVLAAVISGVVVVAHPGPSSGIV 121 Query: 145 TASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAHHDTLAMVVVGRDGSQTR 204 P + + V+ WGT + ++ + A+ ++V+G DG + Sbjct: 122 ARGWDPATGI-----TAAVNEWPRAWGTALQIQ-LSGETTGAYDGRCQLIVIGTDGRREV 175 Query: 205 LATWVAEPGHTATPAGSISMPVDQIAAVQVVSADSGEVLL 244 A+W A P AG+ SM +IA+ VV +D G VL+ Sbjct: 176 AASWTATPSGHIVAAGATSMRPAEIASFHVVRSD-GTVLV 214 >tr|C4DIQ9|C4DIQ9_9ACTO Tax_Id=446470 SubName: Full=Putative uncharacterized protein;[Stackebrandtia nassauensis DSM 44728] Length = 223 Score = 51.6 bits (122), Expect = 8e-05 Identities = 25/54 (46%), Positives = 33/54 (61%) Query: 26 AAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 AAYVLG+L A+R FEAHL C SC A V E +P +L+ +E++A P Sbjct: 11 AAYVLGALEPAERERFEAHLPECESCAATVREFTELPGVLAHAPVEELSAEPAP 64 >tr|D1A4F9|D1A4F9_THECU Tax_Id=471852 SubName: Full=Putative uncharacterized protein;[Thermomonospora curvata DSM 43183] Length = 247 Score = 51.2 bits (121), Expect = 1e-04 Identities = 22/52 (42%), Positives = 35/52 (67%) Query: 28 YVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 YVLG++ A+R +AHL+ C SCR +A + +PALL ++ ++AA+ EP Sbjct: 15 YVLGAIDPAERAAVDAHLSVCPSCRDELAGMAALPALLGRVSEAQIAALAEP 66 >tr|C4ELZ2|C4ELZ2_STRRS Tax_Id=479432 SubName: Full=Putative uncharacterized protein;[Streptosporangium roseum DSM 43021] Length = 258 Score = 50.8 bits (120), Expect = 1e-04 Identities = 25/53 (47%), Positives = 32/53 (60%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEP 79 AYVLG+L + EAHLA CA CRA EL GV L ++ ++VA +G P Sbjct: 15 AYVLGALEPEECVFVEAHLAECAGCRAEFEELTGVATFLGRVSEEDVAQVGSP 67 >tr|C9N8Y6|C9N8Y6_9ACTO Tax_Id=591167 SubName: Full=Putative transmembrane anti-sigma factor;[Streptomyces flavogriseus ATCC 33331] Length = 288 Score = 48.9 bits (115), Expect = 5e-04 Identities = 50/202 (24%), Positives = 71/202 (35%), Gaps = 29/202 (14%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIG--------- 77 AYVLG L A+ FE HLAGCASC A + E G+ +L+ L A G Sbjct: 44 AYVLGILDEAEAAAFETHLAGCASCAAHLDEFAGMEPVLAMLAESPAAVPGARPVPHVPE 103 Query: 78 --EPGVAAGTTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXXX 135 P V G + SQ +A A Sbjct: 104 RPAPRVLDGLVDEVARKRSQRRRRTRYLVAAAAVLVIGGPVAVVTATAGEDSRPRAEAAD 163 Query: 136 XHSAS---------APVQTASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDA 186 H S P + + P+ +V E+TV ++ WGT LR + P Sbjct: 164 PHPTSPAEDAFFHHMPEKKRATDPVTRV-----EATVGMEPKAWGTHTVLRLENVKGP-- 216 Query: 187 HHDTLAMVVVGRDGSQTRLATW 208 ++V V R+G + + +W Sbjct: 217 --QKCSLVAVSRNGEEEVVTSW 236 >tr|B5HDB9|B5HDB9_STRPR Tax_Id=457429 SubName: Full=Putative uncharacterized protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 274 Score = 47.8 bits (112), Expect = 0.001 Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAGTT 86 AYVLG L AD FEAHLAGC C A + E G+ +L+ L E A P + Sbjct: 13 AYVLGVLDEADASAFEAHLAGCDICAAHLEEFSGMEPMLAMLA--EAPAPAPPQSNVYSL 70 Query: 87 SGSPQMS 93 G P MS Sbjct: 71 PGMPGMS 77 >tr|Q9L1U2|Q9L1U2_STRCO Tax_Id=1902 SubName: Full=Putative membrane protein;[Streptomyces coelicolor] Length = 262 Score = 47.0 bits (110), Expect = 0.002 Identities = 62/264 (23%), Positives = 100/264 (37%), Gaps = 50/264 (18%) Query: 12 GAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGAD 71 G P EH + AY LG L A+ FEAHLA C C + EL G+ +++ L Sbjct: 3 GTPAPNEHETV---GAYALGILDDAEATAFEAHLATCEWCAQQLDELAGMEPMMAALA-- 57 Query: 72 EVAAIGEPGVAAG-TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVF----- 125 ++ G P VA T S ++S +L+ +AAA+ Sbjct: 58 DLPGTGTPAVAESLTVKPSARLSEKLV---DEVAERRASKRRRNFYLVGTAAALIIGGPF 114 Query: 126 -------------XXXXXXXXXXXHSASAPVQTASAQPMAQV-----GTHLLESTVSVDG 167 A++P ++A A +V GT + +TV+++ Sbjct: 115 AAVATTGGGGGGGDDGGGRRAEATQQAASPAESAFAAMPDRVTATDPGTQ-VSATVALEK 173 Query: 168 MHWGTFINLRCVCLAPPDAHHDTLAMVVVGRDGSQTRLATWVAE------PGHTATPA-- 219 WGT L L P +++ VG++G + L +W PG T A Sbjct: 174 KAWGTETVLELKNLKGP----QKCSLIAVGKNGERETLTSWSVPDWGYGIPGATTEKAKK 229 Query: 220 -----GSISMPVDQIAAVQVVSAD 238 G + +QI+ +V++ D Sbjct: 230 PLYVHGGAAFEPNQISHFEVMTFD 253 >tr|D1ACI7|D1ACI7_THECU Tax_Id=471852 SubName: Full=Putative transmembrane anti-sigma factor;[Thermomonospora curvata DSM 43183] Length = 62 Score = 47.0 bits (110), Expect = 0.002 Identities = 23/42 (54%), Positives = 26/42 (61%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQL 68 AYVLG L DRR FE HLAGCA CRA + L G L ++ Sbjct: 12 AYVLGLLEEDDRRAFEEHLAGCARCRAELERLSGPAEALRRI 53 >tr|B8HHH4|B8HHH4_ARTCA Tax_Id=452863 SubName: Full=Putative transmembrane anti-sigma factor;[Arthrobacter chlorophenolicus] Length = 272 Score = 46.2 bits (108), Expect = 0.003 Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGA-DEVAAIGEPG 80 AY+LG L A +R FEAHL C +CR +A L +PALL L D +A PG Sbjct: 11 AYLLGGLDAGERAVFEAHLGRCRACRDELAGLETLPALLDALPVPDALALTSVPG 65 >tr|D1ADV1|D1ADV1_THECU Tax_Id=471852 SubName: Full=Putative transmembrane anti-sigma factor;[Thermomonospora curvata DSM 43183] Length = 249 Score = 46.2 bits (108), Expect = 0.003 Identities = 23/39 (58%), Positives = 25/39 (64%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALL 65 AY LG L DRR F+AHLA CA C A +AEL GV L Sbjct: 11 AYALGLLEEPDRRAFQAHLATCARCHAELAELRGVAEAL 49 >tr|A0AVZ4|A0AVZ4_ARTS2 Tax_Id=290399 SubName: Full=Putative uncharacterized protein;[Arthrobacter sp.] Length = 244 Score = 45.8 bits (107), Expect = 0.004 Identities = 50/222 (22%), Positives = 82/222 (36%), Gaps = 25/222 (11%) Query: 27 AYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGADEVAAIGEPGVAAGTT 86 AYVLG+L +R F+ HL C C + L + L+ + A+ + P AAG Sbjct: 17 AYVLGALEPGERALFDQHLTLCPRCSGELKSLSALAGFLNTVPAETAIRMAAPQTAAGPV 76 Query: 87 ----------SGSPQMSSQ--LLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXXXXXXX 134 +G+P+ + Q L P S AA F Sbjct: 77 HRIRGSSAPRAGAPEATDQPGLAPLMAQLATRRRRTRRRTTGLVSGTAAAFLVIGFAAGP 136 Query: 135 XXHSASAPVQ--TASAQPMAQVGTHLLESTVSVDGMHWGTFINLRCVCLAPPDAHHDTLA 192 + P + T+SA QV L++ WGT + L L PD ++ Sbjct: 137 ALTGSPKPEESYTSSAASGPQVQLGLVKKA-------WGTELALDGRGL--PD--RGVIS 185 Query: 193 MVVVGRDGSQTRLATWVAEPGHTATPAGSISMPVDQIAAVQV 234 + V G+ R A+W A A G+ + ++ + +++ Sbjct: 186 LWVRDTSGNYDRAASWNATAQGRAKVTGATPVTIEDVETIEI 227 >tr|B5HP01|B5HP01_9ACTO Tax_Id=463191 SubName: Full=RNA polymerase sigma factor;[Streptomyces sviceus ATCC 29083] Length = 275 Score = 45.4 bits (106), Expect = 0.006 Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 43/263 (16%) Query: 11 LGAPTEGEHPYLMWDAAYVLGSLSAADRREFEAHLAGCASCRAAVAELCGVPALLSQLGA 70 +G+P EH + AY LG L A+ FEAHLA C C + EL G+ +L+ L Sbjct: 22 MGSPVPNEHETV---GAYALGILDDAEATAFEAHLATCEWCAQQLDELAGMEPMLAALA- 77 Query: 71 DEVAAIGEPGVAAG-TTSGSPQMSSQLLPXXXXXXXXXXXXXXXXXXXXSSAAAVFXXXX 129 ++ G P + + SP++ ++L+ +AAA Sbjct: 78 -DLPGSGTPAIGESLSAKPSPRIVNKLVDEVAERRAQKRRRSFYMV----AAAAALIIGG 132 Query: 130 XXXXXXXHSASAPVQTASAQPMAQVGTHLLES----------------TVSVDGMHWGTF 173 Q +A L ES TV++ +WGT Sbjct: 133 PFVAMAASGGDTDGGPKQNQVLAATPKELFESMSDKVSATDSSTGVSATVAMQEKNWGTS 192 Query: 174 INLRCVCLAPPDAHHDTLAMVVVGRDGSQTRLATW-------------VAEPGHTATPAG 220 + L + P +++ VG +G + +TW AE G Sbjct: 193 LGLELKGVKGP----LKCSLIAVGTNGERWTASTWSVGKWGYGIPNGKTAESKQPLYIGG 248 Query: 221 SISMPVDQIAAVQVVSADSGEVL 243 +++ ++I +VV +D +++ Sbjct: 249 AVAPAQNEIDHFEVVDSDGNKLV 271 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.316 0.128 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,543,336,339 Number of extensions: 53684383 Number of successful extensions: 147961 Number of sequences better than 10.0: 130 Number of HSP's gapped: 148814 Number of HSP's successfully gapped: 148 Length of query: 248 Length of database: 3,846,993,858 Length adjustment: 134 Effective length of query: 114 Effective length of database: 2,336,116,656 Effective search space: 266317298784 Effective search space used: 266317298784 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 78 (34.7 bits)