BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_1142
         (169 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HD27|B2HD27_MYCMM Tax_Id=216594 SubName: Full=Transcription...   331   2e-89
tr|A0PMG5|A0PMG5_MYCUA Tax_Id=362242 SubName: Full=Transcription...   329   7e-89
sp|P67443|Y3439_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ...   231   2e-59
sp|P67442|Y3405_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ...   231   2e-59
tr|C6DLS8|C6DLS8_MYCTK Tax_Id=478434 SubName: Full=Transcription...   231   2e-59
tr|A5U880|A5U880_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   231   2e-59
tr|A1KP96|A1KP96_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   231   2e-59
tr|A5WSX6|A5WSX6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   231   2e-59
tr|A4KLT9|A4KLT9_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   231   2e-59
tr|A2VPJ3|A2VPJ3_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   231   2e-59
tr|A0QKP9|A0QKP9_MYCA1 Tax_Id=243243 SubName: Full=Putative HTH-...   225   1e-57
tr|B1MEC1|B1MEC1_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   178   2e-43
tr|A3PV67|A3PV67_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   159   8e-38
tr|A0QNV8|A0QNV8_MYCS2 Tax_Id=246196 SubName: Full=Putative HTH-...   156   7e-37
tr|B8FB43|B8FB43_DESAA Tax_Id=439235 SubName: Full=Transcription...    83   9e-15
tr|B8FE74|B8FE74_DESAA Tax_Id=439235 SubName: Full=Transcription...    83   1e-14
tr|Q0RJZ3|Q0RJZ3_FRAAA Tax_Id=326424 SubName: Full=Putative HTH-...    62   2e-08
tr|A4X1J6|A4X1J6_SALTO Tax_Id=369723 SubName: Full=Transcription...    58   3e-07
tr|A4F9M2|A4F9M2_SACEN Tax_Id=405948 SubName: Full=Transcription...    58   3e-07
tr|C7Q211|C7Q211_CATAD Tax_Id=479433 SubName: Full=Transcription...    58   4e-07
tr|A6GHF4|A6GHF4_9DELT Tax_Id=391625 SubName: Full=Probable tran...    58   4e-07
tr|A4X314|A4X314_SALTO Tax_Id=369723 SubName: Full=Regulatory pr...    57   7e-07
tr|C7MHS8|C7MHS8_BRAFD Tax_Id=446465 SubName: Full=Transcription...    57   7e-07
tr|B7S347|B7S347_9GAMM Tax_Id=247634 SubName: Full=Transcription...    56   1e-06
tr|A6GE16|A6GE16_9DELT Tax_Id=391625 SubName: Full=Putative unch...    56   1e-06
tr|A4BDR6|A4BDR6_9GAMM Tax_Id=314283 SubName: Full=Transcription...    56   1e-06
tr|C3KBN5|C3KBN5_PSEFS Tax_Id=216595 SubName: Full=Putative TetR...    56   2e-06
tr|A8M227|A8M227_SALAI Tax_Id=391037 SubName: Full=Transcription...    56   2e-06
tr|A6V4K7|A6V4K7_PSEA7 Tax_Id=381754 SubName: Full=Transcription...    56   2e-06
tr|C4RNY1|C4RNY1_9ACTO Tax_Id=219305 SubName: Full=TetR family t...    56   2e-06
tr|Q0W3G8|Q0W3G8_UNCMA Tax_Id=351160 SubName: Full=Putative tran...    56   2e-06
tr|Q1GUT1|Q1GUT1_SPHAL Tax_Id=117207 SubName: Full=Transcription...    55   2e-06
tr|Q0BZF1|Q0BZF1_HYPNA Tax_Id=228405 SubName: Full=Transcription...    55   2e-06
tr|B4UYF2|B4UYF2_9ACTO Tax_Id=465541 SubName: Full=TetR-family t...    55   3e-06
tr|Q47SW7|Q47SW7_THEFY Tax_Id=269800 SubName: Full=Putative TetR...    55   4e-06
tr|B1VY88|B1VY88_STRGG Tax_Id=455632 SubName: Full=Putative TetR...    55   4e-06
tr|A6G1H6|A6G1H6_9DELT Tax_Id=391625 SubName: Full=Transcription...    54   5e-06
tr|Q6V6Y0|Q6V6Y0_PSEFL Tax_Id=294 (emhR)SubName: Full=TetR-like ...    54   6e-06
tr|Q82QJ8|Q82QJ8_STRAW Tax_Id=33903 SubName: Full=Putative TetR-...    54   8e-06
tr|Q4KH21|Q4KH21_PSEF5 Tax_Id=220664 (ttgR)SubName: Full=Transcr...    54   8e-06
tr|Q1D0Y9|Q1D0Y9_MYXXD Tax_Id=246197 SubName: Full=Transcription...    54   8e-06
tr|B2IGN8|B2IGN8_BEII9 Tax_Id=395963 SubName: Full=Transcription...    54   8e-06
tr|Q2SIQ9|Q2SIQ9_HAHCH Tax_Id=349521 SubName: Full=Transcription...    53   1e-05
tr|A1S6L5|A1S6L5_SHEAM Tax_Id=326297 SubName: Full=Transcription...    53   1e-05
tr|C9YVN9|C9YVN9_STRSW Tax_Id=680198 SubName: Full=Putative TetR...    53   1e-05
tr|A3X522|A3X522_9RHOB Tax_Id=314262 SubName: Full=Transcription...    53   1e-05
tr|A3J9J0|A3J9J0_9ALTE Tax_Id=270374 SubName: Full=Transcription...    53   1e-05
tr|O27815|O27815_METTH Tax_Id=187420 SubName: Full=Conserved pro...    53   1e-05
tr|A8M5M5|A8M5M5_SALAI Tax_Id=391037 SubName: Full=Transcription...    53   1e-05
tr|C1KA83|C1KA83_PSEFL Tax_Id=294 (emhR)SubName: Full=EmhR;[Pseu...    53   1e-05

>tr|B2HD27|B2HD27_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulator;[Mycobacterium marinum]
          Length = 169

 Score =  331 bits (848), Expect = 2e-89
 Identities = 168/169 (99%), Positives = 169/169 (100%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +LEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR
Sbjct: 1   MLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV
Sbjct: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG 169
           ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG
Sbjct: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG 169


>tr|A0PMG5|A0PMG5_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulator;[Mycobacterium ulcerans]
          Length = 191

 Score =  329 bits (843), Expect = 7e-89
 Identities = 168/169 (99%), Positives = 168/169 (99%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR
Sbjct: 23  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV
Sbjct: 83  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG 169
           ANAIAL LGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG
Sbjct: 143 ANAIALCLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEPSGRG 191


>sp|P67443|Y3439_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Mb3439c;[Mycobacterium bovis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>sp|P67442|Y3405_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Rv3405c/MT3513;[Mycobacterium tuberculosis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|C6DLS8|C6DLS8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A5U880|A5U880_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A1KP96|A1KP96_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A5WSX6|A5WSX6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A4KLT9|A4KLT9_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A2VPJ3|A2VPJ3_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 188

 Score =  231 bits (590), Expect = 2e-59
 Identities = 120/165 (72%), Positives = 134/165 (81%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFAERGPAATSIRDIAARSKVNHGLVFRHFG K+QLVGAVLD+LGT LT LL 
Sbjct: 23  ILQAATDLFAERGPAATSIRDIAARSKVNHGLVFRHFGTKDQLVGAVLDHLGTKLTRLLH 82

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           +  PAD +ERALDR  RV AR LLDGYP  QLQ RFPNVAELL  VR  +  D  ARLAV
Sbjct: 83  SEAPADIIERALDRHGRVLARALLDGYPVGQLQQRFPNVAELLDAVRPRYDSDLGARLAV 142

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+A+AL+ GWRLF PMLRSATG+DEL   +LR +V D VARI+EP
Sbjct: 143 AHALALQFGWRLFAPMLRSATGIDELTGDELRLSVNDAVARILEP 187


>tr|A0QKP9|A0QKP9_MYCA1 Tax_Id=243243 SubName: Full=Putative
           HTH-type transcriptional regulator;[Mycobacterium avium]
          Length = 173

 Score =  225 bits (573), Expect = 1e-57
 Identities = 115/163 (70%), Positives = 135/163 (82%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +LEAA DLFAERGPAATSIRDIAAR  VNHGLVFRHFG KEQLVGAVLD+LG +L+ LL 
Sbjct: 5   ILEAATDLFAERGPAATSIRDIAARCGVNHGLVFRHFGTKEQLVGAVLDHLGANLSALLA 64

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
             TPA+ +E++LDRQMRV ART+LDGYPA QLQ RFPN+A LL  VR  H D+  ARLAV
Sbjct: 65  TDTPAEVVEQSLDRQMRVMARTVLDGYPAGQLQKRFPNIATLLDGVRPLHDDELHARLAV 124

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARII 163
           ANA+AL+ GWRLF P+LR+ATG++EL DA+LR+A   EV RI+
Sbjct: 125 ANALALQFGWRLFAPILRAATGIEELTDAELRRAAGAEVERIL 167


>tr|B1MEC1|B1MEC1_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulator;[Mycobacterium abscessus]
          Length = 186

 Score =  178 bits (451), Expect = 2e-43
 Identities = 89/165 (53%), Positives = 118/165 (71%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VL AA+ LFAE+GPAATSIR++A R+ VNHGLV RHFG+K QL+ A L +L      +  
Sbjct: 21  VLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSKRQLLAATLQHLADTAAAVRE 80

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           AG P ++LE A D Q+RV  R+ LDG+P E+LQ R P +A LL QVR  H D+  ARLA 
Sbjct: 81  AGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMAWLLEQVRPGHADERDARLAA 140

Query: 121 ANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIEP 165
           A+AIAL+LGWRL  P LR+  GLD+++DAD+R  +  ++A+I+ P
Sbjct: 141 AHAIALQLGWRLMGPSLRAGFGLDDMSDADMRAEIAQQIAKIVTP 185


>tr|A3PV67|A3PV67_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 190

 Score =  159 bits (403), Expect = 8e-38
 Identities = 83/145 (57%), Positives = 103/145 (71%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VL  AADLFAERGPAAT++RDIAARSKVN GL+FRH G KE +V AVLD L   L     
Sbjct: 19  VLSHAADLFAERGPAATTLRDIAARSKVNAGLIFRHIGNKEAVVAAVLDQLADDLIAARD 78

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
           AG+  +++E   +R  +V AR LLDGY   +LQ  FPNV +L+   R   GD+  AR+A 
Sbjct: 79  AGSSREEVEARAERSWKVIARALLDGYDVGRLQRGFPNVEQLVAVARERQGDEYAARVAT 138

Query: 121 ANAIALRLGWRLFEPMLRSATGLDE 145
           A+A+AL+LGWRLF P LR+ATGLD+
Sbjct: 139 ADALALQLGWRLFGPFLRAATGLDD 163


>tr|A0QNV8|A0QNV8_MYCS2 Tax_Id=246196 SubName: Full=Putative
           HTH-type transcriptional regulator;[Mycobacterium
           smegmatis]
          Length = 169

 Score =  156 bits (395), Expect = 7e-37
 Identities = 84/145 (57%), Positives = 98/145 (67%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VL  AADLFAERGPAATS+RD+A RS VN GL+FRH G KE LV AVLD+L   L     
Sbjct: 19  VLTHAADLFAERGPAATSLRDVAERSGVNAGLIFRHIGNKEALVAAVLDFLADELVTARG 78

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
              P + +E  ++R  +V AR LLDGY    LQ RFP V EL+   R  H DD  AR A 
Sbjct: 79  TDAPEEVIEAHVERSWKVIARALLDGYDVGALQHRFPVVEELVEAARQRHQDDHAARAAT 138

Query: 121 ANAIALRLGWRLFEPMLRSATGLDE 145
           A+AIAL+LGWRLF P LR+ATGLD+
Sbjct: 139 ADAIALQLGWRLFGPFLRAATGLDD 163


>tr|B8FB43|B8FB43_DESAA Tax_Id=439235 SubName: Full=Transcriptional
           regulator, TetR family;[Desulfatibacillum alkenivorans]
          Length = 199

 Score = 83.2 bits (204), Expect = 9e-15
 Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 12/157 (7%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VLEAA++LFA +G A  S+RDIAA++ VNHGL+ RHFG+KE L     + L   L   + 
Sbjct: 17  VLEAASELFANKGVAGVSVRDIAAKAGVNHGLIHRHFGSKEVLRRQTQEKLSADLIGEMG 76

Query: 61  AGTPADDLERAL-------DRQMRVWARTLLDGYPAEQLQTRFP--NVAELLGQVRVHHG 111
            G+  ++            D   RV ARTLLDG    ++Q+ FP  ++A  + +     G
Sbjct: 77  PGSSFEETMSMAWAALLKHDAYWRVLARTLLDGKWQGEIQSDFPFVDLAVQMAKKEQEQG 136

Query: 112 ---DDTTARLAVANAIALRLGWRLFEPMLRSATGLDE 145
              +D   ++ VA  +A+ LG  +F+  + +A  L +
Sbjct: 137 RVIEDADPKMIVAGIMAMALGLEVFQDYILTAAKLKD 173


>tr|B8FE74|B8FE74_DESAA Tax_Id=439235 SubName: Full=Transcriptional
           regulator, TetR family;[Desulfatibacillum alkenivorans]
          Length = 194

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 62/169 (36%), Positives = 86/169 (50%), Gaps = 16/169 (9%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +LEA+  LFAE+G AA S RDIAA++ VN GL+ RHF  KE +   V D L   + + + 
Sbjct: 18  ILEASTALFAEKGIAAVSWRDIAAKANVNPGLIHRHFRTKENIRLQVQDRLMEEINKDI- 76

Query: 61  AGTPADDLE---------RALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHG 111
            G P D  E         R  D   +V ART LDG     +QT FP + +++  +     
Sbjct: 77  -GEPGDPEEALVNGVLALRKNDAFWKVMARTFLDGKFEGDVQTSFPFLQKMVDSLNTAQD 135

Query: 112 DDT-TAR----LAVANAIALRLGWRLFEPMLRSATGLDELADADLRQAV 155
             T T+R    + VA   A+ LG  LFE  +  ATGLD     + + A+
Sbjct: 136 AGTITSRVDPTMLVAGGTAMALGLLLFEKYILPATGLDAAPPEETQDAI 184


>tr|Q0RJZ3|Q0RJZ3_FRAAA Tax_Id=326424 SubName: Full=Putative
           HTH-type transcriptional regulator;[Frankia alni]
          Length = 210

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 58/168 (34%), Positives = 76/168 (45%), Gaps = 36/168 (21%)

Query: 4   AAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGA----VLDYLGTHLTELL 59
           AA  L AERG  +T++R IA R+ V+  LV  HFG+K+ ++ A    +++YL  +  E  
Sbjct: 20  AAFALVAERGVHSTTVRGIAQRAGVSPALVIHHFGSKQGVIDAISTWIVEYLHRNTREPD 79

Query: 60  RAGTPADDLERALDRQMRVWA----------RTLLDGYP-------------AEQLQTRF 96
           R G PA  L+R L R  R+ A          R LLDG P             AE+L  R 
Sbjct: 80  RGGDPAQALQRRLVRFERMVAEVPLLGAYVRRMLLDGQPDGLDWFRRAVDLSAEELAHR- 138

Query: 97  PNVAELLGQVRVHHGDDTTARLAVANAIALRLGWRLFEPMLRSATGLD 144
               E +G+ R      T  R   A    L     L  PML  A GLD
Sbjct: 139 ----ERMGKAR----PSTDLRAEAAMLFILGFAPVLLGPMLEHALGLD 178


>tr|A4X1J6|A4X1J6_SALTO Tax_Id=369723 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora tropica]
          Length = 266

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 9/110 (8%)

Query: 3   EAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGA----VLDYLGTHLTEL 58
           EAA  LFAERG AATS R +AA + ++  LV  HFG+KE L  A    VL  LGT L EL
Sbjct: 46  EAALRLFAERGFAATSARAVAAEAGLSPALVMHHFGSKEGLRAAVDEEVLARLGTALREL 105

Query: 59  LRAGTPADDLERAL-DRQMRVW-ARTLLDGYPAEQLQTRFPNVAELLGQV 106
             +GT   DL  +L +   R++ A  +L GY    LQ   P  A L G++
Sbjct: 106 DPSGT---DLMMSLGEVSARMFGADPVLRGYLRRVLQEDSPASAALFGRL 152


>tr|A4F9M2|A4F9M2_SACEN Tax_Id=405948 SubName: Full=Transcriptional
           regulator, TetR family;[Saccharopolyspora erythraea]
          Length = 188

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 25/176 (14%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L AAA+LFAERG    ++RD+AAR+ VN  L+FR+FG+K++L   VL      + +   
Sbjct: 18  LLRAAAELFAERGFEQATVRDVAARAGVNQALLFRYFGSKQELFAEVLARDSRGMLDEPL 77

Query: 61  AGTPADDLERAL-------DRQMRVWARTLLDGYPA----EQLQTRF-PNVAELLGQVRV 108
              P   LE  L       D       R+  D   A    E+L  R+   ++EL G    
Sbjct: 78  EELPRRLLEAVLAARHTGEDHPFAAMLRSFSDERAAQLLREELGRRYVARLSELSG---- 133

Query: 109 HHGDDTTARLAVANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVARIIE 164
              DD   R  +  A    LG  L   +LRS   L E A     +AV + + R++E
Sbjct: 134 --ADDAELRAEIVLACVFGLG--LARSVLRS-PALVEAAP----EAVAEHMVRVVE 180


>tr|C7Q211|C7Q211_CATAD Tax_Id=479433 SubName: Full=Transcriptional
           regulator, TetR family;[Catenulispora acidiphila]
          Length = 216

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           ++EAA DL AERGP   S+ D+A  +  +  LV+ +FG K++L  A L      LT  L 
Sbjct: 32  LIEAALDLLAERGPDEVSVDDVAQAAGASRALVYHYFGTKQELYAAALSKAAAELTRRLA 91

Query: 61  AGTPADDLERALDRQMRVW 79
              P D   + LDR +R +
Sbjct: 92  QIEPGDTPLQRLDRAVRAF 110


>tr|A6GHF4|A6GHF4_9DELT Tax_Id=391625 SubName: Full=Probable
           transcriptional regulator, TetR/AcrR family
           protein;[Plesiocystis pacifica SIR-1]
          Length = 216

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           + +AA  LFAE G A TS R IA ++ V+ GL+F HF  K  L+ AV     T  TE+++
Sbjct: 21  IADAALRLFAEHGVAGTSTRSIAKQAGVSEGLIFHHFPDKMALLAAVAATRTTFGTEVVK 80

Query: 61  --AGTPADDLERALDRQMRVWARTLLDGYPAEQL 92
              G  A  L   LD   R++++ ++ G P  QL
Sbjct: 81  LLEGADARPLTEILDDMARMFSKLVVAGTPEAQL 114


>tr|A4X314|A4X314_SALTO Tax_Id=369723 SubName: Full=Regulatory
           protein, TetR;[Salinispora tropica]
          Length = 226

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLD----YLGTHLT 56
           ++  A  LFAERG  ATSI ++AAR++V+  +V+ HFG KE L   V+D     L   +T
Sbjct: 36  LISTARQLFAERGFDATSIEEVAARARVSKPVVYEHFGGKEGLYAVVVDREVRSLLERIT 95

Query: 57  ELLRAGTPADDLERA 71
             L AG P + LE+A
Sbjct: 96  TALTAGHPRELLEQA 110


>tr|C7MHS8|C7MHS8_BRAFD Tax_Id=446465 SubName: Full=Transcriptional
           regulator;[Brachybacterium faecium]
          Length = 280

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 40/59 (67%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELL 59
           +L+AA+ LFAERG  + S+RDI+ R  ++H  +  HF +KE L+GAV+D L  H   LL
Sbjct: 97  ILDAASSLFAERGYHSASLRDISRRVGISHPGMLHHFSSKEALLGAVIDRLEAHAQGLL 155


>tr|B7S347|B7S347_9GAMM Tax_Id=247634 SubName: Full=Transcriptional
           regulator, TetR family;[marine gamma proteobacterium
           HTCC2148]
          Length = 211

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 20/139 (14%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA DLFA++G +ATS+ D+A R  +    ++ HF  KE L  AVL+ L   L E  R
Sbjct: 18  ILDAAEDLFAQKGYSATSLGDVADRVGIRSPSLYNHFRNKEALYEAVLERL---LVEFGR 74

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARLAV 120
                 +  +    ++  W  T++  + A       PN+A LL    +  G  T   +  
Sbjct: 75  PLLEMQESSKLSQERVLEWLETIVRQHHAN------PNLARLLQHAALSGGPHTNEIIE- 127

Query: 121 ANAIALRLGWRLFEPMLRS 139
                     RLF PM RS
Sbjct: 128 ----------RLFNPMFRS 136


>tr|A6GE16|A6GE16_9DELT Tax_Id=391625 SubName: Full=Putative
           uncharacterized protein;[Plesiocystis pacifica SIR-1]
          Length = 230

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 5/133 (3%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTH-LTELL 59
           +LEAA +LFAERG A  S R I +R+  N   +  +FG K  L  A L+      L  + 
Sbjct: 20  LLEAALELFAERGYAGASARAITSRANANVAAIKYYFGDKAGLYHAALELAHARMLAAVP 79

Query: 60  RAGTPADDLERAL----DRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTT 115
            +   ++D E+AL    + +MRV  R  +DG PA +L  R  + A ++ Q+    G  + 
Sbjct: 80  DSAERSEDPEQALRDWYESRMRVAVRVHVDGDPAARLLVRTASEAAIVPQLDAFVGRASQ 139

Query: 116 ARLAVANAIALRL 128
           A  A    +  RL
Sbjct: 140 AMQAELEVLLARL 152


>tr|A4BDR6|A4BDR6_9GAMM Tax_Id=314283 SubName: Full=Transcriptional
           Regulator, TetR family protein;[Reinekea blandensis
           MED297]
          Length = 211

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L++A  LFAE+G A TS+R I  R+KVN   V  HFG+K+ L+ AV     T  T+ L 
Sbjct: 10  ILDSAEQLFAEKGFAETSLRMITTRAKVNLAAVNYHFGSKKDLIQAVFARFLTPFTQKLD 69

Query: 61  A---GTPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLG 104
                  A + E      + V ART+L G    Q   +      LLG
Sbjct: 70  KELDAMVATNREPTFQDVLGVLARTMLTGVETHQRYNKLSVFMRLLG 116


>tr|C3KBN5|C3KBN5_PSEFS Tax_Id=216595 SubName: Full=Putative
          TetR-family regulatory protein;[Pseudomonas
          fluorescens]
          Length = 210

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +L+AA   F ERG A T++ DIAA + V  G ++ HF  K  L+ A+LD L   L EL R
Sbjct: 16 ILDAAEQAFYERGVARTTLADIAALAGVTRGAIYWHFSNKSDLLQALLDTLHEPLDELAR 75

Query: 61 AGTPADDLE 69
          A    D+L+
Sbjct: 76 ASESEDELD 84


>tr|A8M227|A8M227_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora arenicola]
          Length = 227

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLD----YLGTHLT 56
           ++  A  +FAERG  ATSI ++A+R+KV+  +V+ HFG KE L   V+D     L   +T
Sbjct: 37  LISIARQIFAERGFDATSIEEVASRAKVSKPVVYEHFGGKEGLYAVVVDREVRSLLDRIT 96

Query: 57  ELLRAGTPADDLERA 71
             L AG P + LE+A
Sbjct: 97  TALTAGHPRELLEQA 111


>tr|A6V4K7|A6V4K7_PSEA7 Tax_Id=381754 SubName:
          Full=Transcriptional regulator, TetR
          family;[Pseudomonas aeruginosa]
          Length = 205

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +L+ A DLF+ RG AA S+RDIA R  VNH ++  HFG+KE+L      YL   L E + 
Sbjct: 18 ILQTALDLFSTRGFAAVSLRDIAERVGVNHAMIRYHFGSKEELWRDSAAYLFERLAEEI- 76

Query: 61 AGTPADDLERALD 73
             PA DL    D
Sbjct: 77 ---PAPDLASEAD 86


>tr|C4RNY1|C4RNY1_9ACTO Tax_Id=219305 SubName: Full=TetR family
           transcriptional regulator;[Micromonospora sp. ATCC
           39149]
          Length = 229

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLD----YLGTHLT 56
           ++     LFAERG  ATSI ++AAR+KV+  +++ HFG KE L   V+D     L   +T
Sbjct: 39  LISIGRQLFAERGFDATSIEEVAARAKVSKPVIYEHFGGKEGLYAVVVDREVRALLDRIT 98

Query: 57  ELLRAGTPADDLERA 71
             L AG P + LE+A
Sbjct: 99  TALTAGHPRELLEQA 113


>tr|Q0W3G8|Q0W3G8_UNCMA Tax_Id=351160 SubName: Full=Putative
           transcription regulator (TetR family);[Uncultured
           methanogenic archaeon RC-I]
          Length = 224

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           + +AA DLFAE+G   TSIRDIA    +    V+RH+ +KE ++ A+ DY+ + +   L 
Sbjct: 31  IFDAAVDLFAEKGYDRTSIRDIAGAVGIAESAVYRHYQSKEAILDAIFDYMESQIYAPL- 89

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYP 88
              PA D E   +RQ     R +L G P
Sbjct: 90  --PPAPDAE---NRQESSIFRDMLAGLP 112


>tr|Q1GUT1|Q1GUT1_SPHAL Tax_Id=117207 SubName: Full=Transcriptional
           regulator, TetR family;[Sphingopyxis alaskensis]
          Length = 186

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 35/183 (19%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYL--GTHLTEL 58
           +L+AA  +FAE+G AA +IRDI AR+ VN  LV R+FG K +L  A L+       +T+L
Sbjct: 19  ILQAAQQVFAEKGFAAATIRDITARAGVNQSLVSRYFGGKLKLFEAALEAALDARLMTDL 78

Query: 59  LRAG----------------TPADDLER-ALDRQMRVWARTLLDGYPAEQLQTRFPNVAE 101
            +A                 +P   L R A D + RV A+ LL        +  F  +A 
Sbjct: 79  PKARFGKLIVARFADGDGRVSPLPMLFRAAADAEARVVAQRLLH-------ERVFEPLAR 131

Query: 102 LLGQVRVHHGDDTTARLAVANAIALRLGWRLFEPMLRSATGLDELADADLRQAVTDEVAR 161
            +G      G D + R   A  + + LG+  +   L  A G     D DLR+ + DE   
Sbjct: 132 WIG------GADASVR--AARLMMISLGFFTYREQLPLA-GFAGAVDPDLRRWLEDEFQA 182

Query: 162 IIE 164
           I++
Sbjct: 183 IVD 185


>tr|Q0BZF1|Q0BZF1_HYPNA Tax_Id=228405 SubName: Full=Transcriptional
           regulator, TetR family;[Hyphomonas neptunium]
          Length = 236

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +L+AA   FA+RG  A +IRDIA  + V H L+  HFG+KE+L   V+ ++   L+E +R
Sbjct: 31  ILDAARKAFAQRGFEAANIRDIATDAGVTHTLIRYHFGSKEELWKEVVTHMFERLSEEMR 90

Query: 61  AG-------TPADDLERALDRQMRVWAR 81
            G       +P D L   L   +R  AR
Sbjct: 91  EGLKGAKGASPQDSLREFLRTYIRYCAR 118


>tr|B4UYF2|B4UYF2_9ACTO Tax_Id=465541 SubName: Full=TetR-family
           transcriptional regulator;[Streptomyces sp. Mg1]
          Length = 204

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           VLEAAA LFAE+G  A S+  +AA + V  G +FR FG K  L  A+LD     L E + 
Sbjct: 37  VLEAAARLFAEQGVEAVSMDQVAAAAGVGKGTLFRRFGDKSGLAAALLDARERVLQEAVL 96

Query: 61  AGTPADDLERALDRQMRVWARTLLDGYPAEQL------QTRFPNVAELLGQVRVHH 110
           +G P        D ++  +    LD Y  E L      +T  P     +G  R  H
Sbjct: 97  SGPPPLGPGAPADERLAAFLNAYLD-YLLEHLALVRMSETATPGARYRIGAYRFWH 151


>tr|Q47SW7|Q47SW7_THEFY Tax_Id=269800 SubName: Full=Putative
          TetR-family transcriptional regulator;[Thermobifida
          fusca]
          Length = 216

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 6/76 (7%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLD-----YLGTHL 55
          +L    +LFAERG AATS+ +IAAR+ V+  +V+ HFG KE +   V+D      LG  +
Sbjct: 23 LLAIGRELFAERGFAATSVEEIAARAGVSKPVVYEHFGGKEGVYAVVVDREMQRLLGL-V 81

Query: 56 TELLRAGTPADDLERA 71
          ++ L  G+P   LERA
Sbjct: 82 SDALVEGSPRQKLERA 97


>tr|B1VY88|B1VY88_STRGG Tax_Id=455632 SubName: Full=Putative
           TetR-family transcriptional regulator;[Streptomyces
           griseus subsp. griseus]
          Length = 192

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 5/167 (2%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           + + A  LF ERG  A  IRD+AA + V    +F HF +KE LV          L   + 
Sbjct: 19  IADTALRLFLERGYGAVGIRDVAAEADVAVTTLFSHFASKEALVFEQDQGFEQGLVRAVA 78

Query: 61  AGTPADDLERALDRQMRVWAR--TLLDGYPAEQLQTRFPNVAELLGQVRVHHGDDTTARL 118
             TP D L  AL R++    R        P   +    P++ E    +R+ H +   A  
Sbjct: 79  DRTPDDPLIPALRREIHAQVRHCAAPGAAPVRNMIDSSPSLREYEESMRLRHAESLAA-- 136

Query: 119 AVANAIALRLGWRLFEPMLRSATGLDELA-DADLRQAVTDEVARIIE 164
           A+A  + +         + R AT    LA +A   QA  DE+ R+IE
Sbjct: 137 AIAADLGVPETSTACRTIARFATDAYALAREAADPQAAVDEIFRMIE 183


>tr|A6G1H6|A6G1H6_9DELT Tax_Id=391625 SubName: Full=Transcriptional
           regulatory protein;[Plesiocystis pacifica SIR-1]
          Length = 193

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 31/149 (20%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLV-GAVLDYLGTHLTELL 59
           +LEAA   FAERG  ATS+RDI   +K++ G V+R+F +KE L+ G V+  +   + E +
Sbjct: 16  ILEAALACFAERGFHATSMRDICREAKLSAGAVYRYFASKEALIAGMVIAEVEPMMAE-I 74

Query: 60  RAGTPAD-------------DLERALDRQMRVWARTLLDGYPAEQLQTRFPNVAELLGQV 106
           +A  P D             DL+R +  ++ +WA  L +           P +AEL+   
Sbjct: 75  QALEPEDRIRAIILGSFDRPDLDREIRVELSLWAEALTN-----------PRIAELM--- 120

Query: 107 RVHHGDDTTARLAVANAIALRLGWRLFEP 135
            +   +  TA L  A + AL+   R+ +P
Sbjct: 121 -ISQVEPLTATLTEAIS-ALQQSGRIRDP 147


>tr|Q6V6Y0|Q6V6Y0_PSEFL Tax_Id=294 (emhR)SubName: Full=TetR-like
          putative regulatory protein;[Pseudomonas fluorescens]
          Length = 210

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 29/69 (42%), Positives = 40/69 (57%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +LEAA   F ERG A T++ DIA  + V  G ++ HF  K  LV A+LD L   L E+ +
Sbjct: 16 ILEAAEKAFYERGVARTTLADIATLAGVTRGAIYWHFSNKADLVQAMLDTLHEPLDEMAK 75

Query: 61 AGTPADDLE 69
          A    D+L+
Sbjct: 76 ASESEDELD 84


>tr|Q82QJ8|Q82QJ8_STRAW Tax_Id=33903 SubName: Full=Putative
           TetR-family transcriptional regulator;[Streptomyces
           avermitilis]
          Length = 194

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAV----LDYLGTHLT 56
           +LEAA  LF ERGP A    +IA ++ V  G V+RHF A+E L+ A     LD +     
Sbjct: 24  ILEAALRLFVERGPDAP-FTEIAKQAGVGVGTVYRHFPAREDLIEAAYRSELDAVCAAAA 82

Query: 57  ELLRAGTPADDLERALDRQMRVWA 80
           ELL    P D L   +DR +  WA
Sbjct: 83  ELLEQAPPQDALRIWMDRFVDYWA 106


>tr|Q4KH21|Q4KH21_PSEF5 Tax_Id=220664 (ttgR)SubName:
          Full=Transcriptional regulator TtgR;[Pseudomonas
          fluorescens]
          Length = 210

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 29/69 (42%), Positives = 40/69 (57%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +LEAA   F ERG A T++ DIAA + V  G ++ HF  K  LV A+LD L   L E+  
Sbjct: 16 ILEAAEKAFYERGVARTTLADIAALAGVTRGAIYWHFSNKADLVQAMLDSLREPLDEMAA 75

Query: 61 AGTPADDLE 69
          A    D+++
Sbjct: 76 ASENVDEMD 84


>tr|Q1D0Y9|Q1D0Y9_MYXXD Tax_Id=246197 SubName: Full=Transcriptional
           regulator, TetR family;[Myxococcus xanthus]
          Length = 241

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 4/69 (5%)

Query: 8   LFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAV----LDYLGTHLTELLRAGT 63
           +FA +G  ATSI ++A ++ V+  +V+ HFGAKE L  A+    +D L T ++E + +GT
Sbjct: 51  VFASKGYEATSIEEVAHQAGVSKPIVYEHFGAKEGLYAAIVDREMDDLVTRVSESIASGT 110

Query: 64  PADDLERAL 72
           P +  ERA+
Sbjct: 111 PRERFERAV 119


>tr|B2IGN8|B2IGN8_BEII9 Tax_Id=395963 SubName: Full=Transcriptional
           regulator, TetR family;[Beijerinckia indica subsp.
           indica]
          Length = 210

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 24/188 (12%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVL----DYLGTHLT 56
           +++AAA LFAERG  A ++ +IAARSK   G ++R F  KE L  A+L    D +   L 
Sbjct: 26  IMDAAAALFAERGYDAATMTEIAARSKTAIGSLYRFFPTKESLADALLTRYGDLMTRRLD 85

Query: 57  ELLRAGTP------ADDL-ERALDRQM-RVWARTLLDGY--PAEQLQT----RFPNVAEL 102
           E+  A         AD L +  L+RQ  R  A  L++ +  PA++  T        +A L
Sbjct: 86  EITEAAASLSSSALADSLIDLMLERQADRAAALVLIEAHSSPADKRSTLRAVTHRRIATL 145

Query: 103 LGQVRVHHGDDTTARLAVANAIALRLGWRLFEPMLRSATG-LDELADADLRQAVTDEVAR 161
           L  V     + T  +        L L      PML    G + E   A+ R+ V   VA 
Sbjct: 146 LVSV-----NGTLPQARAETMAMLLLHVLKAVPMLACEGGEIREDLLAETRELVRLYVAH 200

Query: 162 IIEPSGRG 169
           I+ P+G G
Sbjct: 201 IMRPTGEG 208


>tr|Q2SIQ9|Q2SIQ9_HAHCH Tax_Id=349521 SubName:
          Full=Transcriptional regulator;[Hahella chejuensis]
          Length = 223

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +L+AA  LFAERG + TS+R I +++KVN   V  HFG+K  L+ AV        T +LR
Sbjct: 10 ILDAAEQLFAERGFSETSLRQITSKAKVNLAAVNYHFGSKNALIQAVFARFINPFTRILR 69

Query: 61 ---AGTPADDLERALDRQMRVWARTLLD 85
              G  A+  +  L+  +++   +++D
Sbjct: 70 DRLQGVVAESRKVELEELLQIVTSSVID 97


>tr|A1S6L5|A1S6L5_SHEAM Tax_Id=326297 SubName: Full=Transcriptional
           regulator, TetR family;[Shewanella amazonensis]
          Length = 228

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 40/185 (21%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVL-DYL-------G 52
           +L+AA  LFAERG + TS+R I ++++VN   V  HFG+K++L+ AVL  YL        
Sbjct: 26  ILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPGAS 85

Query: 53  THLTELLRAG-------------TPADDLERALDRQMRVWARTLLDGYPAEQLQTRFPNV 99
           T LT+L++                P  DL +      R++ + L  GY   Q   R+   
Sbjct: 86  TELTKLVQNNENASLETIFSALVRPLLDLNKVRTEGTRIFLQLLGRGYIESQGHLRW--- 142

Query: 100 AELLGQVRVHHGDDTTARLAVANAIA-----LRLGWRLFEPM------LRSATGLDELAD 148
                 +  H+G+     + V +  A       + WRL   +      + S+  L E+A+
Sbjct: 143 -----FITTHYGEHLDRFVQVVSQSAPHIPPAEMFWRLHFTLGTVVFTMASSDALMEIAE 197

Query: 149 ADLRQ 153
           AD ++
Sbjct: 198 ADFKE 202


>tr|C9YVN9|C9YVN9_STRSW Tax_Id=680198 SubName: Full=Putative
           TetR-family regulator;[Streptomyces scabies]
          Length = 250

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +++AA DL    G AA S R IAA   V    V   FG KE L  AV++ L   L   ++
Sbjct: 56  LIKAAIDLMTREGVAAGSTRAIAAELGVAQATVHYTFGTKEDLYRAVMEQLTHDLITQVQ 115

Query: 61  AGTPAD-DLERALDRQMRVWARTLLDGYPAEQLQT-------RFPNVAELLGQVRVHHGD 112
           A  P+D   E ++        +TL +     QL T       R P + E L   + H+G+
Sbjct: 116 AAAPSDGGFEESVASLAAALWKTLREQPTTHQLLTELSMFALRTPRLQEAL---QAHYGE 172

Query: 113 DTTARLAVANAIALRLGWRLFEP 135
            T +   +    A R G RL +P
Sbjct: 173 VTASTTKLVTEAAERTGHRLAQP 195


>tr|A3X522|A3X522_9RHOB Tax_Id=314262 SubName: Full=Transcriptional
           regulator, TetR family protein;[Roseobacter sp. MED193]
          Length = 210

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           ++EA  +L AE+G    ++R IA R++V  GL+  +F +KE L+ A  ++  T +T+L  
Sbjct: 20  LIEATLELVAEKGVRGATVRGIADRAQVTQGLIRHYFSSKEDLITAAFEHHMTQMTDLTF 79

Query: 61  AGTPADDLERALDRQMRVWARTLL 84
           A  P   ++ +   Q+RV+ R+ L
Sbjct: 80  A--PVTQVQGSAREQLRVFVRSSL 101


>tr|A3J9J0|A3J9J0_9ALTE Tax_Id=270374 SubName:
          Full=Transcriptional regulator;[Marinobacter sp. ELB17]
          Length = 227

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +L+AA +LFA+RG A TS+R I +R+KVN   V  HFG+K+ L+ AV     T  +    
Sbjct: 10 ILDAAEELFADRGFAETSLRMITSRAKVNLAAVNYHFGSKKSLIQAVFARFLTPFSATAE 69

Query: 61 AGTPADDLERALDRQMRVWARTL 83
          A    DDLE++ + +     +TL
Sbjct: 70 AA--FDDLEKSCNGKAPTLNQTL 90


>tr|O27815|O27815_METTH Tax_Id=187420 SubName: Full=Conserved
           protein;[Methanobacterium thermoautotrophicum]
          Length = 204

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 1   VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
           +  AA +LF +RG   T+ R+IA+R+ V+   VFR FG+K+ L+  ++D     L+++L 
Sbjct: 18  ITNAARELFIKRGYRGTATREIASRAGVSEVTVFRKFGSKKNLLKRIMDESTERLSQVLE 77

Query: 61  A----GTPADDLERALDRQMRVWARTLLD 85
                G P D LE   ++ +RV     +D
Sbjct: 78  VLDGDGDPRDVLEEVSEQLIRVMVEEKID 106


>tr|A8M5M5|A8M5M5_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora arenicola]
          Length = 217

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 3   EAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLRAG 62
           EAA  LFA+RG AATS R +AA + ++  LV  HFG+KE L  AV + +   L   LR  
Sbjct: 16  EAALRLFAQRGFAATSARAVAAEAGLSPALVMHHFGSKEGLRAAVDEQVLARLGAALREL 75

Query: 63  TP-ADDLERAL-DRQMRVW-ARTLLDGYPAEQLQTRFPNVAELLGQV 106
            P   DL  +L +   R++ A  +L GY    LQ   P  A L G++
Sbjct: 76  DPGGGDLMASLGEVSARMFGADPVLRGYLRRVLQEDSPASAALFGRL 122


>tr|C1KA83|C1KA83_PSEFL Tax_Id=294 (emhR)SubName:
          Full=EmhR;[Pseudomonas fluorescens]
          Length = 210

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 29/69 (42%), Positives = 40/69 (57%)

Query: 1  VLEAAADLFAERGPAATSIRDIAARSKVNHGLVFRHFGAKEQLVGAVLDYLGTHLTELLR 60
          +LEAA   F ERG A T++ DIA  + V  G ++ HF  K  L+ A+LD L   L EL R
Sbjct: 16 ILEAAEKAFFERGVARTTLADIATLAGVTRGAIYWHFSNKADLLQAMLDTLHEPLDELAR 75

Query: 61 AGTPADDLE 69
          A    ++L+
Sbjct: 76 ASEREEELD 84


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,187,167,560
Number of extensions: 45845289
Number of successful extensions: 135874
Number of sequences better than 10.0: 8330
Number of HSP's gapped: 137421
Number of HSP's successfully gapped: 8344
Length of query: 169
Length of database: 3,846,993,858
Length adjustment: 127
Effective length of query: 42
Effective length of database: 2,415,043,077
Effective search space: 101431809234
Effective search space used: 101431809234
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)