BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1165 (911 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HDQ7|B2HDQ7_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 1406 0.0 tr|A0PS17|A0PS17_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 1379 0.0 tr|Q93IG6|Q93IG6_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 989 0.0 tr|Q7TVB4|Q7TVB4_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 989 0.0 tr|C1AHI1|C1AHI1_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 989 0.0 tr|A5U839|A5U839_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 989 0.0 tr|A1KP58|A1KP58_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 989 0.0 tr|A4KLQ5|A4KLQ5_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 989 0.0 tr|C6DLA6|C6DLA6_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 988 0.0 tr|A5WST7|A5WST7_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 988 0.0 tr|A0QKM9|A0QKM9_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 951 0.0 tr|Q73U96|Q73U96_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 780 0.0 tr|Q1BCT3|Q1BCT3_MYCSS Tax_Id=164756 SubName: Full=Periplasmic s... 695 0.0 tr|A3PVU2|A3PVU2_MYCSJ Tax_Id=164757 SubName: Full=Integral memb... 695 0.0 tr|A1UC60|A1UC60_MYCSK Tax_Id=189918 SubName: Full=Integral memb... 695 0.0 tr|A0QSX6|A0QSX6_MYCS2 Tax_Id=246196 SubName: Full=Periplasmic s... 667 0.0 tr|A1T5B7|A1T5B7_MYCVP Tax_Id=350058 SubName: Full=Integral memb... 619 e-175 tr|A4TER7|A4TER7_MYCGI Tax_Id=350054 SubName: Full=Integral memb... 505 e-141 tr|Q0SAF8|Q0SAF8_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 311 3e-82 tr|C1B7T6|C1B7T6_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ... 304 3e-80 tr|Q5YPS4|Q5YPS4_NOCFA Tax_Id=37329 SubName: Full=Putative histi... 300 6e-79 tr|C3JDQ4|C3JDQ4_RHOER Tax_Id=596309 SubName: Full=Periplasmic s... 283 1e-73 tr|C0ZMJ4|C0ZMJ4_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 281 4e-73 tr|Q5Z229|Q5Z229_NOCFA Tax_Id=37329 SubName: Full=Putative histi... 275 3e-71 tr|A3TFR9|A3TFR9_9MICO Tax_Id=313589 SubName: Full=Putative hist... 272 2e-70 tr|Q0S027|Q0S027_RHOSR Tax_Id=101510 SubName: Full=Probable sens... 263 6e-68 tr|Q5YZ71|Q5YZ71_NOCFA Tax_Id=37329 SubName: Full=Putative histi... 263 1e-67 tr|C1AWA0|C1AWA0_RHOOB Tax_Id=632772 SubName: Full=Putative unch... 258 2e-66 tr|C4E240|C4E240_STRRS Tax_Id=479432 SubName: Full=Nitrate/nitri... 234 3e-59 tr|C4E252|C4E252_STRRS Tax_Id=479432 SubName: Full=Signal transd... 234 4e-59 tr|C4E228|C4E228_STRRS Tax_Id=479432 SubName: Full=Signal transd... 233 1e-58 tr|C1YUZ8|C1YUZ8_NOCDA Tax_Id=446468 SubName: Full=Signal transd... 230 6e-58 tr|C6WHX4|C6WHX4_ACTMD Tax_Id=446462 SubName: Full=Putative sens... 229 1e-57 tr|O86522|O86522_STRCO Tax_Id=1902 SubName: Full=Putative membra... 225 2e-56 tr|D1ACN8|D1ACN8_THECU Tax_Id=471852 SubName: Full=Putative sens... 225 2e-56 tr|C9Z568|C9Z568_STRSW Tax_Id=680198 SubName: Full=RarA (Conserv... 224 3e-56 tr|C7QFA8|C7QFA8_CATAD Tax_Id=479433 SubName: Full=Putative sens... 224 3e-56 tr|A4FN81|A4FN81_SACEN Tax_Id=405948 SubName: Full=Putative unch... 224 4e-56 tr|Q82JQ6|Q82JQ6_STRAW Tax_Id=33903 (cvnA7)SubName: Full=Putativ... 223 1e-55 tr|C9NL01|C9NL01_9ACTO Tax_Id=591167 SubName: Full=Putative sens... 223 1e-55 tr|C6WA48|C6WA48_ACTMD Tax_Id=446462 SubName: Full=Putative sens... 223 1e-55 tr|B5HM61|B5HM61_9ACTO Tax_Id=463191 SubName: Full=Signal transd... 223 1e-55 tr|B1VZ13|B1VZ13_STRGG Tax_Id=455632 SubName: Full=Putative sens... 222 2e-55 tr|C4E219|C4E219_STRRS Tax_Id=479432 SubName: Full=Nitrate/nitri... 222 2e-55 tr|B5HGJ2|B5HGJ2_STRPR Tax_Id=457429 SubName: Full=Putative unch... 221 3e-55 tr|B5GIY5|B5GIY5_9ACTO Tax_Id=465543 SubName: Full=Histidine kin... 221 4e-55 tr|Q47RD9|Q47RD9_THEFY Tax_Id=269800 SubName: Full=Signal transd... 219 1e-54 tr|C7N0J1|C7N0J1_SACVD Tax_Id=471857 SubName: Full=Nitrate/nitri... 218 4e-54 tr|B5H076|B5H076_STRCL Tax_Id=443255 SubName: Full=Signal transd... 216 9e-54 tr|B4V584|B4V584_9ACTO Tax_Id=465541 SubName: Full=Membrane prot... 215 2e-53 >tr|B2HDQ7|B2HDQ7_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical regultory protein;[Mycobacterium marinum] Length = 911 Score = 1406 bits (3640), Expect = 0.0 Identities = 750/911 (82%), Positives = 750/911 (82%) Query: 1 MTMFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXX 60 MTMFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWK Sbjct: 1 MTMFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKVVAIAVVPLLLAMVLG 60 Query: 61 XXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE 120 RIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE Sbjct: 61 GLRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE 120 Query: 121 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINAS 180 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINAS Sbjct: 121 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINAS 180 Query: 181 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFG 240 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFG Sbjct: 181 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFG 240 Query: 241 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES 300 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES Sbjct: 241 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES 300 Query: 301 VTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDL 360 VTK DT DGALKVAHTDL Sbjct: 301 VTKAVQARASARRDAAIRDTVFVLGAILVAVVVVLLVARALVRPLRQLRDGALKVAHTDL 360 Query: 361 EGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET 420 EGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET Sbjct: 361 EGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET 420 Query: 421 MSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRD 480 MSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRD Sbjct: 421 MSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRD 480 Query: 481 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT 540 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT Sbjct: 481 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT 540 Query: 541 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRL 600 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRL Sbjct: 541 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRL 600 Query: 601 AARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXX 660 AARHGIRVGLRGPS VYLPRTVLVD Sbjct: 601 AARHGIRVGLRGPSTGEAGGGTTAEVYLPRTVLVDGQRPGPAAGQPPQRRAVVVRPPSSE 660 Query: 661 XXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXLKT 720 TGDSTA RRNPGSSGIADVPG LKT Sbjct: 661 PAPAPDAAGSAPTGDSTAVPPLPPVSLLPRRNPGSSGIADVPGQQPEQQQPPRRRRELKT 720 Query: 721 PWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPARDDS 780 PWWET SDTAAFFARRS SVKPGPPSALADPARDDS Sbjct: 721 PWWETAQPAGQPEQAAPQQSDTAAFFARRSPAAGAGPDEPAPSVKPGPPSALADPARDDS 780 Query: 781 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARL 840 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARL Sbjct: 781 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARL 840 Query: 841 VPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH 900 VPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH Sbjct: 841 VPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH 900 Query: 901 AHRASQEPDQQ 911 AHRASQEPDQQ Sbjct: 901 AHRASQEPDQQ 911 >tr|A0PS17|A0PS17_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical regultory protein;[Mycobacterium ulcerans] Length = 911 Score = 1379 bits (3570), Expect = 0.0 Identities = 737/911 (80%), Positives = 740/911 (81%) Query: 1 MTMFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXX 60 MTMFAR TTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWK Sbjct: 1 MTMFARLTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKVVAIAVVPLLLAMVLG 60 Query: 61 XXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE 120 RIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE Sbjct: 61 GLRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE 120 Query: 121 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINAS 180 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANT SLRDRVTAYVPLLLTAEDAINAS Sbjct: 121 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTSSLRDRVTAYVPLLLTAEDAINAS 180 Query: 181 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFG 240 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRG EAPEAQLRNSMITLAGT PSTLFG Sbjct: 181 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGVEAPEAQLRNSMITLAGTGPSTLFG 240 Query: 241 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES 300 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES Sbjct: 241 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES 300 Query: 301 VTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDL 360 VTK DT DGALKVAHTDL Sbjct: 301 VTKAVQARASARRDAAIRDTVLVLGAILVAVVVVLLVARALVRPLRQLRDGALKVAHTDL 360 Query: 361 EGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET 420 EGEIAKVR GAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET Sbjct: 361 EGEIAKVREGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFET 420 Query: 421 MSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRD 480 MSRRSRSLVDQQLSLIDGLERNEEDP+RLDTLFRLDHLAARLRRNSANLLVLAGAQISRD Sbjct: 421 MSRRSRSLVDQQLSLIDGLERNEEDPDRLDTLFRLDHLAARLRRNSANLLVLAGAQISRD 480 Query: 481 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT 540 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT Sbjct: 481 HREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPT 540 Query: 541 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRL 600 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLH+G EVTPANARHMGLFVVGRL Sbjct: 541 APVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHSGGEVTPANARHMGLFVVGRL 600 Query: 601 AARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXX 660 AARHGIRVGLRGPS VYLPRTVLVD Sbjct: 601 AARHGIRVGLRGPSTGEAGGGTTAEVYLPRTVLVDGQRPGSAAGQPPQRSAFVVRPPSSE 660 Query: 661 XXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXLKT 720 TGDSTA RRNPGSSGIADVPG LKT Sbjct: 661 PAPAPDAAGSAPTGDSTAVPPLPPVSLLPRRNPGSSGIADVPGQQPEQQQPPRRRRELKT 720 Query: 721 PWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPARDDS 780 PWWET SDTAAFFARRS SVKPGPPS ADP RDDS Sbjct: 721 PWWETAQPAGRPEQAAPQQSDTAAFFARRSPAAGAGPDEPAPSVKPGPPSVPADPVRDDS 780 Query: 781 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARL 840 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQ+TPVQSRTDHGLPVRTPGARL Sbjct: 781 IYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQETPVQSRTDHGLPVRTPGARL 840 Query: 841 VPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH 900 VPGAADSDEP QDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH Sbjct: 841 VPGAADSDEPTQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAH 900 Query: 901 AHRASQEPDQQ 911 AHRASQEPDQQ Sbjct: 901 AHRASQEPDQQ 911 >tr|Q93IG6|Q93IG6_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|Q7TVB4|Q7TVB4_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb3400c;[Mycobacterium bovis] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|C1AHI1|C1AHI1_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|A5U839|A5U839_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|A1KP58|A1KP58_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_3437c;[Mycobacterium bovis] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|A4KLQ5|A4KLQ5_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 876 Score = 989 bits (2558), Expect = 0.0 Identities = 554/914 (60%), Positives = 619/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRMAI+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMAIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|C6DLA6|C6DLA6_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 876 Score = 988 bits (2554), Expect = 0.0 Identities = 553/914 (60%), Positives = 618/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRM I+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|A5WST7|A5WST7_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 876 Score = 988 bits (2554), Expect = 0.0 Identities = 553/914 (60%), Positives = 618/914 (67%), Gaps = 41/914 (4%) Query: 1 MTMFARPTTPVEAAPG---APVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXX 57 MTMFARPT PV AA AP A A P +RPP+WS NWPV WK Sbjct: 1 MTMFARPTIPVAAAASDISAP-AQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAM 59 Query: 58 XXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAAR 117 R+ MA++SGLRL ARA++IPAITKYMSALDVA+LASSTG DVEG +KNF AR Sbjct: 60 VLAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTAR 119 Query: 118 KNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAI 177 K ELQTRLA+T+V++DVRSGVN++LNGGQALLD+ LA++I LRDRVTAY PLLLTA++ I Sbjct: 120 KYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVI 179 Query: 178 NASVRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPST 237 +ASVRVD+EQIR +VQGLSRAVGARGQMT+QEILVTRGA+ E QLR++M+TLAGTEPST Sbjct: 180 DASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPST 239 Query: 238 LFGMTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDA 297 LFGM+ LG GSPD K L QQMVTRM I+SDP L NP+LL SIQITR IAEQVI D Sbjct: 240 LFGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDT 299 Query: 298 TESVTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAH 357 TE+VTK D DGALKVAH Sbjct: 300 TEAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAH 359 Query: 358 TDLEGEIAKVRAGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDM 417 TDL+GEIA VRAG EPIPEPL VYTTEEIGQVAHAVDELH + L+LAG+E RLR LVN+M Sbjct: 360 TDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEM 419 Query: 418 FETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQI 477 FETMSRRSRSLVDQQLS+ID LERNEEDP RLD+LFRLDHLAARLRRNSANLLVLAGAQI Sbjct: 420 FETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQI 479 Query: 478 SRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYS 537 +RDHREPVPL TVISAAVSEVEDYRRV+ V DC V+GAAAG VIHLLAELIDNAL YS Sbjct: 480 TRDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYS 539 Query: 538 PPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVV 597 PT PVRV+A GSEG VLLRI+DSGLGMT++DRRMANMRL AG EVTP +ARHMGLFVV Sbjct: 540 SPTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVV 599 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXX 657 GRLA RHGIRVGLRGP VYLP VL Sbjct: 600 GRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVL-----------EGTAPAQPPKPRV 648 Query: 658 XXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXX 717 T A RR PGSSGIADVP Sbjct: 649 FAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPA-----QPMQQRRRE 703 Query: 718 LKTPWWETXXXXXXXXXXXXXXSDTAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPAR 777 LKTPWWE F KP PP A P Sbjct: 704 LKTPWWED------------------RFQQEPKQPPAPEPRPAPPPAKPAPP---AGPVD 742 Query: 778 DDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPG 837 DD IY++MLSEM DPHELA+S DLDW+SVWD GWSAAAEA D PVQSRTD+GLPVR PG Sbjct: 743 DDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREPG 802 Query: 838 ARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTG 897 ARLVPGAA + P+++ AS+ GL P + +H AA+RDP+AVRAS+SSHFGGV TG Sbjct: 803 ARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTG 862 Query: 898 RAHAHRASQEPDQQ 911 R+HA +SQ P+QQ Sbjct: 863 RSHARESSQGPNQQ 876 >tr|A0QKM9|A0QKM9_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 947 Score = 951 bits (2458), Expect = 0.0 Identities = 539/954 (56%), Positives = 613/954 (64%), Gaps = 50/954 (5%) Query: 1 MTMFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXX 60 MTMF+RP P A P G + P KRPPAWSL NWPV WK Sbjct: 1 MTMFSRPAEPAAAEAPGPAPLGGGAVPAKRPPAWSLSNWPVRWKVLAIVLVPLMLATVFG 60 Query: 61 XXRIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNE 120 RIHG MAN++GLRLA ARADV+PAITKYMSALDVALLA S GRD EG KKN+ ARKNE Sbjct: 61 VLRIHGAMANAAGLRLAAARADVVPAITKYMSALDVALLAGSAGRDAEGAKKNYEARKNE 120 Query: 121 LQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINAS 180 LQTRL +T+V DVR+GVN++L+ GQ L+++ ++ LR+RVT Y P+LLTAE+ INAS Sbjct: 121 LQTRLGDTDVTDDVRAGVNNLLDTGQMLVNKVAEGSLGLRERVTFYAPILLTAENVINAS 180 Query: 181 VRVDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFG 240 VRVD+E+IRA+ QGLSRAVGARGQMT+Q+ILVTRGAE PE QLR SM TLAGTEPSTLFG Sbjct: 181 VRVDDERIRAQAQGLSRAVGARGQMTMQKILVTRGAELPEPQLRTSMATLAGTEPSTLFG 240 Query: 241 MTEVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATES 300 M+EVLG GSP+AKTL QQMV+RMAI+SDP SVL NP LL+SIQ T IA+QVI + T S Sbjct: 241 MSEVLGAGSPEAKTLQQQMVSRMAIMSDPASVLVDNPDLLRSIQTTDDIADQVIKNTTAS 300 Query: 301 VTKXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDL 360 VTK DT DGALKVAHTDL Sbjct: 301 VTKSVHAQAAERRNSAILDTALVLAAIVIALAVVLLVARALVRPLRTLRDGALKVAHTDL 360 Query: 361 EGEIAKVRAG-AEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFE 419 E EIA V+AG AEPIP PLPVYTTEEIGQVAHAVDELH Q L+LAGDEARLR LVNDMFE Sbjct: 361 EEEIAHVKAGGAEPIPAPLPVYTTEEIGQVAHAVDELHTQALLLAGDEARLRLLVNDMFE 420 Query: 420 TMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISR 479 TMSRRSRSLVDQQL+LID LERNE++PERLD LFRLDHLAARLRRNSANLLVLAGA+++R Sbjct: 421 TMSRRSRSLVDQQLALIDRLERNEDNPERLDNLFRLDHLAARLRRNSANLLVLAGAKLAR 480 Query: 480 DHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPP 539 D R+PVPL TVI+AAVSEVEDYRRVE G+ +C+++GAAAG IHL AELIDNAL YSPP Sbjct: 481 DQRDPVPLATVINAAVSEVEDYRRVEIAGLPECSLLGAAAGGAIHLFAELIDNALRYSPP 540 Query: 540 TAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVT----PANARHMGLF 595 T RVSA RG +GGV++RIADSGLGM ++DRR+ANMRL AG + P NARH+GLF Sbjct: 541 TTSARVSASRGGDGGVVVRIADSGLGMNDADRRIANMRLQAGGDANPDPHPENARHLGLF 600 Query: 596 VVGRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVD------------XXXXXXXX 643 VVGR+AA HG+RVGLRGP+ VYLP TVL Sbjct: 601 VVGRIAAWHGMRVGLRGPAANESGSGTTAEVYLPPTVLAGRVVAEPSGPRHIRAVSSPSA 660 Query: 644 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSTAXXXXXXXXXXXRRNPGSSGIADVPG 703 TGD++ RRNPGSSGIADV Sbjct: 661 KLASAIAAPAEEGGRHDGTQQPAARGTRNTGDAST----PPVTLLPRRNPGSSGIADVAA 716 Query: 704 --XXXXXXXXXXXXXXLKTPWWE--------------TXXXXXXXXXXXXXXSDTAAFFA 747 L TPWWE SDT+AFFA Sbjct: 717 VPAPPAEPQPRRQRRELATPWWEASPAPRPAPEPQQPAPEPQQPAPRPARAASDTSAFFA 776 Query: 748 RRSXXXXXXXXXXXXSVKPG---------PPSALADPARDDSIYQKMLSEMTSDPHELAN 798 R KP PP+A PA DD IY++MLSEM DPH+L N Sbjct: 777 ARPRTETPPETPPEAPPKPAPKPKPEASIPPAASTGPADDDVIYRRMLSEMLGDPHDLVN 836 Query: 799 SADLDWRSVWDRGWSAAAEAQDTPVQSR-TDHGLPVRTPGARLVPGAADSDEPNQDEADR 857 S DLDW+SVWDRGW+ AA A+D PV+S TDHGLPVRTPGARLVPG A D D Sbjct: 837 SPDLDWQSVWDRGWTLAAAAEDKPVESHTTDHGLPVRTPGARLVPGGAHGAAAEPD--DE 894 Query: 858 PPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRASQEPDQQ 911 P + R P +P QH A RDP AVRAS SSHFGGV TGR+HA +S+ PDQQ Sbjct: 895 PGLNGRSPAPRRP-QHAAVARDPEAVRASFSSHFGGVRTGRSHARESSEGPDQQ 947 >tr|Q73U96|Q73U96_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 944 Score = 780 bits (2015), Expect = 0.0 Identities = 416/636 (65%), Positives = 475/636 (74%), Gaps = 5/636 (0%) Query: 3 MFARPTTPVEAAPGAPVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXX 62 MF+RP P A P G ++ P KRPPAWSL NWPV WK Sbjct: 1 MFSRPAEPAAAEAPGPAPLGGDAVPAKRPPAWSLSNWPVRWKVLAIVLVPLMLATVFGVL 60 Query: 63 RIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQ 122 RIHG MAN++GLRLA ARADV+PAITKYMSALDVALLA S GRD EG KKN+ ARKNELQ Sbjct: 61 RIHGAMANAAGLRLAAARADVVPAITKYMSALDVALLAGSAGRDAEGAKKNYEARKNELQ 120 Query: 123 TRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVR 182 TRL +T+V DVR+GVN++L+ GQ L+++ ++ LR+RVT Y P+LLTAE+ INASVR Sbjct: 121 TRLGDTDVTDDVRAGVNNLLDAGQMLVNKVAEGSLGLRERVTFYAPILLTAENVINASVR 180 Query: 183 VDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMT 242 VD+E+IRA+ QGLSRAVGARGQMT+Q+ILVTRGAE PE QLR SM TLAGTEPSTLFGM+ Sbjct: 181 VDDERIRAQAQGLSRAVGARGQMTMQKILVTRGAELPEPQLRTSMATLAGTEPSTLFGMS 240 Query: 243 EVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVT 302 EVLG GSP+AKTL QQMV+RMAI+SDP SVL NP LL+SIQ T IA+QVI + T SVT Sbjct: 241 EVLGAGSPEAKTLQQQMVSRMAIMSDPASVLVDNPDLLRSIQTTDDIADQVIKNTTASVT 300 Query: 303 KXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEG 362 K DT DGALKVAHTDLE Sbjct: 301 KSVHAQAAERRNSAILDTALVLAAIVIALAVVLLVARALVRPLRTLRDGALKVAHTDLEE 360 Query: 363 EIAKVRAG-AEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETM 421 EIA V+AG AEPIP PLPVYTTEEIGQVAHAVDELH Q L+LAGDEARLR LVNDMFETM Sbjct: 361 EIAHVKAGGAEPIPAPLPVYTTEEIGQVAHAVDELHTQALLLAGDEARLRLLVNDMFETM 420 Query: 422 SRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDH 481 SRRSRSLVDQQL+LID LERNE++PERLD LFRLDHLAARLRRNSANLLVLAGA+++RD Sbjct: 421 SRRSRSLVDQQLALIDRLERNEDNPERLDNLFRLDHLAARLRRNSANLLVLAGAKLARDQ 480 Query: 482 REPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTA 541 R+PVPL TVI+AAVSEVEDYRRVE G+ +C+++GAAAG IHL AELIDNAL YSPPT Sbjct: 481 RDPVPLATVINAAVSEVEDYRRVEIAGLPECSLLGAAAGGAIHLFAELIDNALRYSPPTT 540 Query: 542 PVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVT----PANARHMGLFVV 597 RVSA RG +GGV++RIADSGLGM ++DRR+ANMRL AG + P NARH+GLFVV Sbjct: 541 SARVSASRGGDGGVVVRIADSGLGMNDADRRIANMRLQAGGDANPDPHPENARHLGLFVV 600 Query: 598 GRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVL 633 GR+AA HG+RVGLRGP+ VYLP TVL Sbjct: 601 GRIAAWHGMRVGLRGPAANESGSGTTAEVYLPPTVL 636 Score = 197 bits (502), Expect = 4e-48 Identities = 118/247 (47%), Positives = 132/247 (53%), Gaps = 28/247 (11%) Query: 690 RRNPGSSGIADVPGXXXXXXXXXXXXXX--LKTPWWETXXXXXXXXXXXXXX-------- 739 RRNPGSSGIADV L TPWWE Sbjct: 701 RRNPGSSGIADVAAVPAPPAEPQPRRQRRELATPWWEASPAPRPAPERAPEPAPEPQQPA 760 Query: 740 -------SDTAAFFARRSXXXXXXXXXXXXSVKPGP-------PSALADPARDDSIYQKM 785 SDT+AFFA R KP P P+A PA DD IY++M Sbjct: 761 PRPARAASDTSAFFAARPRTETPPEAPPKPPPKPKPKPEASIPPAASTGPADDDVIYRRM 820 Query: 786 LSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSR-TDHGLPVRTPGARLVPGA 844 LSEM DPH+L NS DLDW+SVWDRGW+ AA A+D PV+S TDHGLPVRTPGARLVPG Sbjct: 821 LSEMLGDPHDLVNSPDLDWQSVWDRGWTLAAAAEDKPVESHTTDHGLPVRTPGARLVPGG 880 Query: 845 ADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRA 904 A D D P + R P +P QH A RDP AVRAS SSHFGGV TGR+HA + Sbjct: 881 AHGAAAEPD--DEPGLNGRSPAPRRP-QHAAVTRDPEAVRASFSSHFGGVRTGRSHARES 937 Query: 905 SQEPDQQ 911 S+ PDQQ Sbjct: 938 SEGPDQQ 944 >tr|Q1BCT3|Q1BCT3_MYCSS Tax_Id=164756 SubName: Full=Periplasmic sensor signal transduction histidine kinase; Flags: Precursor;[Mycobacterium sp.] Length = 851 Score = 695 bits (1794), Expect = 0.0 Identities = 400/879 (45%), Positives = 510/879 (58%), Gaps = 52/879 (5%) Query: 25 SAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVI 84 +APPKRP WS NWPV WK RI + + LRLA RA++I Sbjct: 14 TAPPKRPSRWSPANWPVRWKVLAIVLVPLVLAGVFGGARIAANVDQAGELRLAAERAELI 73 Query: 85 PAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNG 144 P I YM+A++ ++A++ G+ E + K L+ +LA T+V+ DVR V ++L+ Sbjct: 74 PDINGYMAAMENVVVAATQGQQTESALAEYDTAKATLRQQLAATDVVPDVRLAVTNLLDL 133 Query: 145 GQALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQ 204 GQ L+++ AN + LR RV Y PLLLTAE AI S R D++ ++ + LSRA+GARGQ Sbjct: 134 GQDLVNKVTANAVDLRQRVITYAPLLLTAETAITGSARGDDQDVQMRAEALSRAIGARGQ 193 Query: 205 MTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMA 264 M +Q++LVTRG E PE +LR +MIT+AGTEPST+ GM E+LG S +A TL +M RM+ Sbjct: 194 MAMQQMLVTRGGEVPEPELRTAMITVAGTEPSTVSGMAELLGGASGEANTLRSEMFKRMS 253 Query: 265 IISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXX 324 +IS+P VL GNP+LLQS +T IA+++I D T+++ D Sbjct: 254 MISNPAVVLTGNPELLQSQAVTADIADRMIADTTDAIPAAVTSAADAQRSSAIRDAVLIL 313 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIP-EPLPVYTT 383 D ALKVAH DL E+ +VRAGAEP P P+PVYTT Sbjct: 314 LVFVAALVLVLLVARSLVRPLRRLRDSALKVAHEDLPEELDRVRAGAEPGPVPPIPVYTT 373 Query: 384 EEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNE 443 EEIGQVAHAVDELH Q ++LAG+++RL+ ++DMFET+SRRSRSLVDQQLSLID LER+E Sbjct: 374 EEIGQVAHAVDELHEQAVLLAGEQSRLQLQISDMFETLSRRSRSLVDQQLSLIDRLERDE 433 Query: 444 EDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRR 503 +DPERL++LFRLDHLAAR+RRN ANLLVL+GA I RD EPVP+ VI+AA SEVEDY R Sbjct: 434 DDPERLESLFRLDHLAARMRRNGANLLVLSGASIPRDQAEPVPVAAVINAAASEVEDYTR 493 Query: 504 VETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSG 563 V T GV D +IG AAG ++HLLAEL+DNAL YSPPT+ VRVSA+ GG+++ + D+G Sbjct: 494 VVTAGVPDSRIIGGAAGDLVHLLAELLDNALRYSPPTSQVRVSAMHTGNGGLVIEVGDTG 553 Query: 564 LGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXX 623 LGM E+D R+AN RL +G EVTP ARHMGLFVVGRLAA+HG V LR Sbjct: 554 LGMAEADLRIANARLQSGGEVTPYTARHMGLFVVGRLAAQHGFVVRLRSTVVDEPNSGTT 613 Query: 624 XXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSTAXXXXX 683 VY+P +L GD Sbjct: 614 VGVYVPAELLA---------YTDTGRQPHLPPTAPPQAAAPARHHRPEPAGDLNG-HSDL 663 Query: 684 XXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXLKTPWWETXXXXXXXXXXXXXXSDTA 743 +RNPG+SGIA G ++T+ Sbjct: 664 AAGGLPQRNPGASGIAGTAG------------------------EQTDPRRAVPAPTNTS 699 Query: 744 AFFARRSXXXXXXXXXXXXSVKPGP-PSALADPARDDSIYQKMLSEMTSDPHELANSADL 802 +FFA R+ +P P P A + DD+IYQ MLSE DP +L S DL Sbjct: 700 SFFASRAQAAANGAHE-----RPEPEPVANPNAGADDAIYQSMLSEWLVDPTDLGKSTDL 754 Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASD 862 DW+SVWD GWSAAA A + PV+ RTD GLPVR PGARLVPG A + ++++ D Sbjct: 755 DWKSVWDHGWSAAAAADEAPVRERTDEGLPVRDPGARLVPGGAHRGDDSEEQVASAAGDD 814 Query: 863 RGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 T RDP A+RASMSSHFGGVH GRAH+ Sbjct: 815 -----------TPPRRDPEAIRASMSSHFGGVHAGRAHS 842 >tr|A3PVU2|A3PVU2_MYCSJ Tax_Id=164757 SubName: Full=Integral membrane sensor signal transduction histidine kinase; Flags: Precursor;[Mycobacterium sp.] Length = 851 Score = 695 bits (1794), Expect = 0.0 Identities = 400/879 (45%), Positives = 510/879 (58%), Gaps = 52/879 (5%) Query: 25 SAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVI 84 +APPKRP WS NWPV WK RI + + LRLA RA++I Sbjct: 14 TAPPKRPSRWSPANWPVRWKVLAIVLVPLVLAGVFGGARIAANVDQAGELRLAAERAELI 73 Query: 85 PAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNG 144 P I YM+A++ ++A++ G+ E + K L+ +LA T+V+ DVR V ++L+ Sbjct: 74 PDINGYMAAMENVVVAATQGQQTESALAEYDTAKATLRQQLAATDVVPDVRLAVTNLLDL 133 Query: 145 GQALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQ 204 GQ L+++ AN + LR RV Y PLLLTAE AI S R D++ ++ + LSRA+GARGQ Sbjct: 134 GQDLVNKVTANAVDLRQRVITYAPLLLTAETAITGSARGDDQDVQMRAEALSRAIGARGQ 193 Query: 205 MTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMA 264 M +Q++LVTRG E PE +LR +MIT+AGTEPST+ GM E+LG S +A TL +M RM+ Sbjct: 194 MAMQQMLVTRGGEVPEPELRTAMITVAGTEPSTVSGMAELLGGASGEANTLRSEMFKRMS 253 Query: 265 IISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXX 324 +IS+P VL GNP+LLQS +T IA+++I D T+++ D Sbjct: 254 MISNPAVVLTGNPELLQSQAVTADIADRMIADTTDAIPAAVTSAADAQRSSAIRDAVLIL 313 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIP-EPLPVYTT 383 D ALKVAH DL E+ +VRAGAEP P P+PVYTT Sbjct: 314 LVFVAALVLVLLVARSLVRPLRRLRDSALKVAHEDLPEELDRVRAGAEPGPVPPIPVYTT 373 Query: 384 EEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNE 443 EEIGQVAHAVDELH Q ++LAG+++RL+ ++DMFET+SRRSRSLVDQQLSLID LER+E Sbjct: 374 EEIGQVAHAVDELHEQAVLLAGEQSRLQLQISDMFETLSRRSRSLVDQQLSLIDRLERDE 433 Query: 444 EDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRR 503 +DPERL++LFRLDHLAAR+RRN ANLLVL+GA I RD EPVP+ VI+AA SEVEDY R Sbjct: 434 DDPERLESLFRLDHLAARMRRNGANLLVLSGASIPRDQAEPVPVAAVINAAASEVEDYTR 493 Query: 504 VETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSG 563 V T GV D +IG AAG ++HLLAEL+DNAL YSPPT+ VRVSA+ GG+++ + D+G Sbjct: 494 VVTAGVPDSRIIGGAAGDLVHLLAELLDNALRYSPPTSQVRVSAMHTGNGGLVIEVGDTG 553 Query: 564 LGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXX 623 LGM E+D R+AN RL +G EVTP ARHMGLFVVGRLAA+HG V LR Sbjct: 554 LGMAEADLRIANARLQSGGEVTPYTARHMGLFVVGRLAAQHGFVVRLRSTVVDEPNSGTT 613 Query: 624 XXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSTAXXXXX 683 VY+P +L GD Sbjct: 614 VGVYVPAELLA---------YTDTGRQPHLPPTAPPQAAAPARHHRPEPAGDLNG-HSDL 663 Query: 684 XXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXLKTPWWETXXXXXXXXXXXXXXSDTA 743 +RNPG+SGIA G ++T+ Sbjct: 664 AAGGLPQRNPGASGIAGTAG------------------------EQTDPRRAVPAPTNTS 699 Query: 744 AFFARRSXXXXXXXXXXXXSVKPGP-PSALADPARDDSIYQKMLSEMTSDPHELANSADL 802 +FFA R+ +P P P A + DD+IYQ MLSE DP +L S DL Sbjct: 700 SFFASRAQAAANGAHE-----RPEPEPVANPNAGADDAIYQSMLSEWLVDPTDLGKSTDL 754 Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASD 862 DW+SVWD GWSAAA A + PV+ RTD GLPVR PGARLVPG A + ++++ D Sbjct: 755 DWKSVWDHGWSAAAAADEAPVRERTDEGLPVRDPGARLVPGGAHRGDDSEEQVASAAGDD 814 Query: 863 RGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 T RDP A+RASMSSHFGGVH GRAH+ Sbjct: 815 -----------TPPRRDPEAIRASMSSHFGGVHAGRAHS 842 >tr|A1UC60|A1UC60_MYCSK Tax_Id=189918 SubName: Full=Integral membrane sensor signal transduction histidine kinase; Flags: Precursor;[Mycobacterium sp.] Length = 851 Score = 695 bits (1794), Expect = 0.0 Identities = 400/879 (45%), Positives = 510/879 (58%), Gaps = 52/879 (5%) Query: 25 SAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVI 84 +APPKRP WS NWPV WK RI + + LRLA RA++I Sbjct: 14 TAPPKRPSRWSPANWPVRWKVLAIVLVPLVLAGVFGGARIAANVDQAGELRLAAERAELI 73 Query: 85 PAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNG 144 P I YM+A++ ++A++ G+ E + K L+ +LA T+V+ DVR V ++L+ Sbjct: 74 PDINGYMAAMENVVVAATQGQQTESALAEYDTAKATLRQQLAATDVVPDVRLAVTNLLDL 133 Query: 145 GQALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQ 204 GQ L+++ AN + LR RV Y PLLLTAE AI S R D++ ++ + LSRA+GARGQ Sbjct: 134 GQDLVNKVTANAVDLRQRVITYAPLLLTAETAITGSARGDDQDVQMRAEALSRAIGARGQ 193 Query: 205 MTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMA 264 M +Q++LVTRG E PE +LR +MIT+AGTEPST+ GM E+LG S +A TL +M RM+ Sbjct: 194 MAMQQMLVTRGGEVPEPELRTAMITVAGTEPSTVSGMAELLGGASGEANTLRSEMFKRMS 253 Query: 265 IISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXX 324 +IS+P VL GNP+LLQS +T IA+++I D T+++ D Sbjct: 254 MISNPAVVLTGNPELLQSQAVTADIADRMIADTTDAIPAAVTSAADAQRSSAIRDAVLIL 313 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIP-EPLPVYTT 383 D ALKVAH DL E+ +VRAGAEP P P+PVYTT Sbjct: 314 LVFVAALVLVLLVARSLVRPLRRLRDSALKVAHEDLPEELDRVRAGAEPGPVPPIPVYTT 373 Query: 384 EEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNE 443 EEIGQVAHAVDELH Q ++LAG+++RL+ ++DMFET+SRRSRSLVDQQLSLID LER+E Sbjct: 374 EEIGQVAHAVDELHEQAVLLAGEQSRLQLQISDMFETLSRRSRSLVDQQLSLIDRLERDE 433 Query: 444 EDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRR 503 +DPERL++LFRLDHLAAR+RRN ANLLVL+GA I RD EPVP+ VI+AA SEVEDY R Sbjct: 434 DDPERLESLFRLDHLAARMRRNGANLLVLSGASIPRDQAEPVPVAAVINAAASEVEDYTR 493 Query: 504 VETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSG 563 V T GV D +IG AAG ++HLLAEL+DNAL YSPPT+ VRVSA+ GG+++ + D+G Sbjct: 494 VVTAGVPDSRIIGGAAGDLVHLLAELLDNALRYSPPTSQVRVSAMHTGNGGLVIEVGDTG 553 Query: 564 LGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXX 623 LGM E+D R+AN RL +G EVTP ARHMGLFVVGRLAA+HG V LR Sbjct: 554 LGMAEADLRIANARLQSGGEVTPYTARHMGLFVVGRLAAQHGFVVRLRSTVVDEPNSGTT 613 Query: 624 XXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSTAXXXXX 683 VY+P +L GD Sbjct: 614 VGVYVPAELLA---------YTDTGRQPHLPPTAPPQAAAPARHHRPEPAGDLNG-HSDL 663 Query: 684 XXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXLKTPWWETXXXXXXXXXXXXXXSDTA 743 +RNPG+SGIA G ++T+ Sbjct: 664 AAGGLPQRNPGASGIAGTAG------------------------EQTDPRRAVPAPTNTS 699 Query: 744 AFFARRSXXXXXXXXXXXXSVKPGP-PSALADPARDDSIYQKMLSEMTSDPHELANSADL 802 +FFA R+ +P P P A + DD+IYQ MLSE DP +L S DL Sbjct: 700 SFFASRAQAAANGAHE-----RPEPEPVANPNAGADDAIYQSMLSEWLVDPTDLGKSTDL 754 Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASD 862 DW+SVWD GWSAAA A + PV+ RTD GLPVR PGARLVPG A + ++++ D Sbjct: 755 DWKSVWDHGWSAAAAADEAPVRERTDEGLPVRDPGARLVPGGAHRGDDSEEQVASAAGDD 814 Query: 863 RGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 T RDP A+RASMSSHFGGVH GRAH+ Sbjct: 815 -----------TPPRRDPEAIRASMSSHFGGVHAGRAHS 842 >tr|A0QSX6|A0QSX6_MYCS2 Tax_Id=246196 SubName: Full=Periplasmic sensor signal transduction histidine kinase;[Mycobacterium smegmatis] Length = 927 Score = 667 bits (1722), Expect = 0.0 Identities = 403/896 (44%), Positives = 515/896 (57%), Gaps = 57/896 (6%) Query: 63 RIHGGMANSSGLRLADARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQ 122 RI+ + ++ LRLA RA++IP I YM+AL+ L+ASS D + F +RK+ELQ Sbjct: 23 RIYASVTEAADLRLAADRAELIPDINNYMAALEGVLVASSGAGDGQAALATFDSRKSELQ 82 Query: 123 TRLANTNVLSDVRSGVNSVLNGGQALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVR 182 R+ +T+VL DVR V ++L+ GQ L+D ++ANT+ LR R+ Y PLLLTAE A+ S Sbjct: 83 QRVDSTDVLGDVREAVGTMLDKGQTLVDASMANTVGLRQRILDYAPLLLTAEAAVTGSTH 142 Query: 183 VDNEQIRAEVQGLSRAVGARGQMTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMT 242 +++++ E + L RA+GARGQMT+QE++V RGAE PE LR SMIT+AGTEPST+ +T Sbjct: 143 SADQRVQTEAEALGRAIGARGQMTIQEMMVNRGAEEPEPVLRKSMITMAGTEPSTVAALT 202 Query: 243 EVLGVGSPDAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVT 302 +VLG S DA TL +MV RMAI+++P L GNP LL+S++ TR IAEQ+I D T ++ Sbjct: 203 KVLGSASDDATTLRDEMVKRMAIMANPGIPLVGNPVLLESLENTRKIAEQIITDNTSAIP 262 Query: 303 KXXXXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEG 362 D+ DGALKVAH DL Sbjct: 263 AAVEAEAADARNDAIRDSVLVALAVISALVVVLLVARSLVRPLRTLRDGALKVAHEDLAK 322 Query: 363 EIAKVRAGAEPIP-EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETM 421 EI +VRAG EP P PLPVYT+EE+GQVAHAVDELH Q + LAG++A+L+ V DMFET+ Sbjct: 323 EIERVRAGGEPGPITPLPVYTSEEVGQVAHAVDELHEQAVFLAGEQAQLQLQVADMFETL 382 Query: 422 SRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDH 481 SRRSRSLVDQQLSLID LERNE+DP+RL++LFRLDHLAAR+RRN ANLLVL+GA+++R+ Sbjct: 383 SRRSRSLVDQQLSLIDELERNEDDPQRLNSLFRLDHLAARMRRNGANLLVLSGAKVTREK 442 Query: 482 REPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTA 541 EPV + TVI+AA SEVEDY RV T VAD V+G+AAG +IHLLAEL+DNAL YSPPT+ Sbjct: 443 SEPVAVATVINAAASEVEDYTRVVTSDVADADVVGSAAGDLIHLLAELLDNALRYSPPTS 502 Query: 542 PVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLA 601 VRVSAV G +++ +AD GLGMTESD R+AN+RL +G EV P ARHMGLFVVGRLA Sbjct: 503 QVRVSAVFAGNGALVIEVADVGLGMTESDLRVANIRLKSGGEVNPYTARHMGLFVVGRLA 562 Query: 602 ARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXXX 661 +HG+ V LR VY+P +LV Sbjct: 563 DQHGLVVRLRSTIPDEPGSGTTAGVYVPAQLLVTEAGTAGTPAFDQFDAQPEDAATAPGH 622 Query: 662 XXXXXXXXXXXTGDSTA---XXXXXXXXXXXRRNPGSSGIADVPGXXXXXXXXXXXXXXL 718 T T +RNPG+SGI+++PG Sbjct: 623 PTGYPNVVSLDTRFVTTGSEHDDDLAAGLLPQRNPGASGISEMPGVFAEPEPAAEVSGDA 682 Query: 719 KTPW---W----ETXXXXXXXXXXXXXXSDTAAFFARRS-------XXXXXXXXXXXXSV 764 + W W E +DT++FFA R+ + Sbjct: 683 QGEWPQQWPAPQEAAAPEEVAPQANGRPTDTSSFFASRAQAAGGTQNGAQVNGVHLDGAH 742 Query: 765 KPGPPSALAD-----------------PARD--DSIYQKMLSEMTSDPHELANSADLDWR 805 G + AD PA D DSIYQ M+SE DP A SADLDW+ Sbjct: 743 TNGAANGTADSFTGFFGSSDDQLDQREPAGDPGDSIYQSMVSEFAIDPTTHARSADLDWQ 802 Query: 806 SVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRG- 864 +VW++GWS AA AQD PV T+ GLP+RTPGARLVPG + + A+ SD Sbjct: 803 TVWEKGWSVAAAAQDAPVDRHTEEGLPMRTPGARLVPGGVAAAAGRTNGANGHHHSDLNG 862 Query: 865 ------LPPDQPAQHTAAM-------------RDPNAVRASMSSHFGGVHTGRAHA 901 D A+ A+ RDP AVRAS+SSHFGGVH GR+HA Sbjct: 863 GVNGEIHGNDNGAEAVASANEADNGMFAAFKPRDPEAVRASISSHFGGVHAGRSHA 918 >tr|A1T5B7|A1T5B7_MYCVP Tax_Id=350058 SubName: Full=Integral membrane sensor signal transduction histidine kinase; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 860 Score = 619 bits (1597), Expect = e-175 Identities = 375/880 (42%), Positives = 482/880 (54%), Gaps = 43/880 (4%) Query: 29 KRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAIT 88 KRP +L NWPV K RI+ ++ LR A RAD++PA+ Sbjct: 8 KRPAPLALSNWPVRVKVLAIVVVPLLLACVFGGLRIYSSATEAAELRHAAQRADMVPAVV 67 Query: 89 KYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQAL 148 YM+AL+ A++ ++ G D F +R+ LQ L T V VR N++++ GQ L Sbjct: 68 DYMAALEAAMVTATEGGDARQALTVFESRRTGLQHLLDVTPVDDGVRLATNTLIDFGQNL 127 Query: 149 LDQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQMTLQ 208 +D+ A+ I LR RV Y PLL+T+E AI V D+E++R++ LSRAVGARGQM +Q Sbjct: 128 IDKISADAIDLRTRVMTYAPLLITSETAITGLVGADDERVRSDADTLSRAVGARGQMAMQ 187 Query: 209 EILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMAIISD 268 +LV GAE PE LR++M+T+AGTEP+T+ M LG + A TL +MV RMA++S+ Sbjct: 188 RMLVNSGAELPEPLLRSAMVTIAGTEPATVTAMGGYLGGATEQASTLRSEMVKRMALLSE 247 Query: 269 PDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXXXXXX 328 P + L GNP+LL S +IT IA +I TE + D Sbjct: 248 PTTALVGNPELLASQKITGDIAAGLIAQTTEDIPAAVARQADDARTAAIRDAALVGAAIL 307 Query: 329 XXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIP-EPLPVYTTEEIG 387 D ALKVAH DL E+ VR+ + P +P+PV+TTEE+G Sbjct: 308 VALILVTLVARSMVRPLRTLRDSALKVAHEDLPREVEHVRSDGKEFPVQPIPVHTTEEVG 367 Query: 388 QVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPE 447 QVAHAVDELH Q ++LAG++ARL+ V DMFET+SRR+RSLVDQQLSLID LER+EEDP+ Sbjct: 368 QVAHAVDELHQQAVMLAGEQARLQLQVTDMFETLSRRNRSLVDQQLSLIDRLERDEEDPD 427 Query: 448 RLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETG 507 RL++LFRLDHLAAR+RRN +NL+VLAGAQISR+ E VP+ +++AA SEVEDY R+ T Sbjct: 428 RLESLFRLDHLAARMRRNGSNLMVLAGAQISRERAESVPVTALVNAAASEVEDYTRIVTT 487 Query: 508 GVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMT 567 G+ D V G AG ++HLLAEL+DNAL YSPPT VRVSAV G+++ ++D+GLGMT Sbjct: 488 GLPDGEVDGVVAGDLVHLLAELLDNALRYSPPTTEVRVSAVPTGNNGLVIEVSDTGLGMT 547 Query: 568 ESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXXXXVY 627 ESD R+AN RL +G EV P ARHMGLFVVGRLAA HG+ V LR VY Sbjct: 548 ESDLRVANTRLESGGEVNPYTARHMGLFVVGRLAASHGLVVRLRSTVAGEPDSGTTAGVY 607 Query: 628 LPRTVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSTAXXXXXXXXX 687 +P +L+ ++ A Sbjct: 608 IPARLLIHTAPAQYGGRDDEPVPADAHAGIATALALEVPAGVPR---EAPAAAAGPATDL 664 Query: 688 XXRRNPGSSGIADVPGXXXXXXXXXXXXXXL------KTPWWETXXXXXXXXXXXXXXSD 741 +R PG+SGI + P + TP S+ Sbjct: 665 LPQRRPGASGIVETPAETPVAPIETPVATSVAVVTPAATP-VAAVTPVAPPVETPPARSE 723 Query: 742 TAAFFARRSXXXXXXXXXXXXSVKPGPPSALADPARDDSIYQKMLSEMTSDPHELANSAD 801 AAFF+ R A AD DD+IYQKMLSE DPHEL++S D Sbjct: 724 VAAFFSPR---------PQPTETNGHARHAAADSDPDDAIYQKMLSEWLVDPHELSHSTD 774 Query: 802 LDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPAS 861 L+W+SVWD GWSAA A+ PV T GLPVR PGARLVPG A+ + P AS Sbjct: 775 LNWKSVWDHGWSAAEAAEAAPVLDHTAEGLPVRRPGARLVPGHANGE---------PVAS 825 Query: 862 DRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 A RDP AVR S+ SHFGGVH GR A Sbjct: 826 --------------AGRDPEAVRNSIGSHFGGVHAGRLRA 851 >tr|A4TER7|A4TER7_MYCGI Tax_Id=350054 SubName: Full=Integral membrane sensor signal transduction histidine kinase; Flags: Precursor;[Mycobacterium gilvum] Length = 803 Score = 505 bits (1301), Expect = e-141 Identities = 286/609 (46%), Positives = 370/609 (60%), Gaps = 1/609 (0%) Query: 27 PPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPA 86 P +RP W+ NWPV K RI + L A RA ++PA Sbjct: 7 PDQRPSRWAPPNWPVRVKVLALVTVPLVLACVFGGLRISASTVEARELAHAADRAQMVPA 66 Query: 87 ITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQ 146 + YM+AL A++ + G + F RK EL L +V VR N++L GQ Sbjct: 67 VVDYMAALQNAMVTAGGGGNPAAALGEFDFRKAELSRVLEGADVDDSVRLATNTLLEYGQ 126 Query: 147 ALLDQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQMT 206 LLD+ A ++LR +V + PLL+TA+ A+ SV D + +R E LSRAVGARGQM Sbjct: 127 NLLDRIGAAEMNLRTQVMTFGPLLITAQTALTGSVGSDEDSVRTEADVLSRAVGARGQMA 186 Query: 207 LQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMAII 266 +Q++LVTRG E PE LR++M+TLAGTEP+T+ M LG S A L QMV RM+++ Sbjct: 187 MQDMLVTRGGELPEPLLRSAMVTLAGTEPATVTAMGTFLGGASDRADALRSQMVRRMSLL 246 Query: 267 SDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXXXX 326 SDP VL GNP+LL S +IT IA+ +IN + + D+ Sbjct: 247 SDPAVVLVGNPELLMSQKITADIAQSLINRIADEIPARVSRQADDARTAAIRDSVLVGAA 306 Query: 327 XXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRA-GAEPIPEPLPVYTTEE 385 D AL+VAH DL E+ +VR G E +P+PV+TTEE Sbjct: 307 ILVALILVLWVARSLVRPLRTLRDSALRVAHDDLGREVERVRDDGKEFAVDPIPVHTTEE 366 Query: 386 IGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEED 445 +GQVAHAVDELH Q LVLAG +ARL+ V DMFET+SRR+RSLV+QQLSLIDGLER+EED Sbjct: 367 VGQVAHAVDELHQQALVLAGAQARLQLQVTDMFETLSRRNRSLVEQQLSLIDGLERDEED 426 Query: 446 PERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVE 505 P+RL +LF+LDHLAAR+RRN ANLLVLAGA+IS D EPV + +++AA SEVE+Y R+ Sbjct: 427 PDRLQSLFQLDHLAARMRRNGANLLVLAGARISHDRAEPVAVAAIVNAAASEVEEYPRIV 486 Query: 506 TGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLG 565 TG + D V +AAG ++HLLAEL+DN L YSPP VRVSAV G+++ ++D+GLG Sbjct: 487 TGDLPDSEVAASAAGDLVHLLAELLDNGLRYSPPHTQVRVSAVPTDNNGLVIEVSDTGLG 546 Query: 566 MTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXXXX 625 MTE+D R+ANMRL +G EV P ARHMGLFVV RLAA+HG+ LR Sbjct: 547 MTEADLRVANMRLESGGEVNPYTARHMGLFVVSRLAAQHGLVARLRSTVAGQPDSGTTAG 606 Query: 626 VYLPRTVLV 634 VY+P +LV Sbjct: 607 VYIPARLLV 615 Score = 137 bits (345), Expect = 7e-30 Identities = 70/138 (50%), Positives = 84/138 (60%), Gaps = 22/138 (15%) Query: 768 PPSALADPARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRT 827 P AD DD+IYQKMLSE DPHEL++S+DL+W+SVWD GWSAA A PV+ RT Sbjct: 684 PRPGHADIDHDDTIYQKMLSEWLVDPHELSHSSDLNWKSVWDNGWSAAEAADAAPVRHRT 743 Query: 828 DHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASM 887 GLPVR PGARL+PG AD++ H +RDP+AVRAS+ Sbjct: 744 PEGLPVRRPGARLIPGHADTEN----------------------GHPLPVRDPDAVRASL 781 Query: 888 SSHFGGVHTGRAHAHRAS 905 HFGGVH GR HA A+ Sbjct: 782 GGHFGGVHAGRRHAREAA 799 >tr|Q0SAF8|Q0SAF8_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 941 Score = 311 bits (797), Expect = 3e-82 Identities = 209/629 (33%), Positives = 315/629 (50%), Gaps = 24/629 (3%) Query: 28 PKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAI 87 P R W + W + WK R+ G ++N+ A + V+P I Sbjct: 6 PPRAKFWDIEGWGLRWKVTAVLAVPVTVAMVLGGLRVQGELSNAVHFTEAADQIVVVPDI 65 Query: 88 TKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQA 147 +++ ++G + +++ A N++ + N + V S +N ++ G+A Sbjct: 66 VALEASMGTVTSGYASGTLTKQDREDAEALMNDVSEQARNPELDPAVASSINQTVSDGRA 125 Query: 148 LL---DQTLANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQGLSRAVGARGQ 204 LL D T L +R A+ + D I + D+E + Q L+ A A+ + Sbjct: 126 LLNLMDSPGVATDLLAERQRAFAADFIREVDDIVRPIE-DSEVVDKGYQ-LTNAWQAQRR 183 Query: 205 MTLQE---ILVTRGAEAPEAQLR--------NSMITLAGTEPSTLFGMTEVLGVGSPDAK 253 + Q ++V AP+ + + +++I AG E S L + G + Sbjct: 184 LFDQAMGLVIVKDVYAAPDGREKARTGDIPTSAVIAAAGAESSLLDVLDRYYPKGDARLE 243 Query: 254 TLHQQMVTRMAIISD--PDSVLAGNPQLLQ---SIQITRGIAEQVINDATESVTKXXXXX 308 TL + R A+I D+ G +LQ S+ +R + +++ ++A + + Sbjct: 244 TLRNNINDRNALIDQGLADAARGGMLPILQLRSSLIASRDVYQELTSEAAKDIASTVQVR 303 Query: 309 XXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVR 368 DT GALK A DL I +++ Sbjct: 304 AAETRSAALRDTAIVLGTLLAALVLALLVSRSLIGPIRRLRYGALKAARRDLPEAIEQIK 363 Query: 369 AGAEPIP---EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRS 425 A +P EP+ V+++EEIGQ+A AVD++H Q L LAG++A+LR +NDMFET++RRS Sbjct: 364 ASDDPRALSFEPVAVHSSEEIGQLARAVDDIHGQALKLAGEQAQLRLQINDMFETLARRS 423 Query: 426 RSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPV 485 +SLVDQQL LI+ LE E+DP+RL++LFRLDHLAAR+RRN NLL+LAG ++ R P+ Sbjct: 424 KSLVDQQLGLIENLEFEEKDPKRLESLFRLDHLAARMRRNGENLLILAGTRVRRSQAAPI 483 Query: 486 PLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRV 545 PL V+ AA+SEVEDY+RV+ G + + G V+HLLAEL+DN+L SPP V Sbjct: 484 PLGDVLRAAISEVEDYQRVQMGATPEGALSGTVVTDVVHLLAELVDNSLRASPPDTVVTF 543 Query: 546 SAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHG 605 S R +GGVLL IAD G+G+ D R N RL +G EV P ARHMGLFVV RLA RHG Sbjct: 544 SFARAVDGGVLLEIADRGIGIPADDMRAVNERLASGGEVGPETARHMGLFVVSRLAKRHG 603 Query: 606 IRVGLRGPSXXXXXXXXXXXVYLPRTVLV 634 + V LR +++P ++V Sbjct: 604 LTVRLRSTFDTARNPGVTVSIHIPNALIV 632 Score = 72.8 bits (177), Expect = 2e-10 Identities = 52/149 (34%), Positives = 67/149 (44%), Gaps = 23/149 (15%) Query: 764 VKPGPPSALADPARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPV 823 + P P A P I+ M+S+ +DP A A W S D GWSAA +TPV Sbjct: 814 IDPPPAEATPRPGGGTPIFSDMVSDWLTDPTG-AEGAPGVWHSAGDAGWSAAERISETPV 872 Query: 824 QSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAV 883 + + GLP R PG RLVPG + A + G +RDP + Sbjct: 873 EVDPEIGLPKRRPGDRLVPGTVEG------------AHNTGT--------LRRVRDPETI 912 Query: 884 RASMSSHFGGVHTGRAH--AHRASQEPDQ 910 RA++S H GV GRA A R S E D+ Sbjct: 913 RANLSRHQQGVRNGRATRLAERNSIEGDR 941 >tr|C1B7T6|C1B7T6_RHOOB Tax_Id=632772 SubName: Full=Hypothetical membrane protein;[Rhodococcus opacus] Length = 943 Score = 304 bits (779), Expect = 3e-80 Identities = 204/630 (32%), Positives = 313/630 (49%), Gaps = 26/630 (4%) Query: 28 PKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAI 87 P R W + W + WK R+ G ++N+ A + V+P I Sbjct: 6 PPRAKFWDIEGWGLRWKVTAVLAVPVTVAMVLGGLRVQGELSNAVHFTEAADQIVVVPDI 65 Query: 88 TKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQA 147 +++ ++G + + + + N++ + N + V S +N ++ G+A Sbjct: 66 VALEASMGTVTSGYASGTLTKEDRADAESLMNDVSEQARNPELDPAVASSINQTVSDGRA 125 Query: 148 LL---DQTLANTISLRDRVTAYVPLLLTAEDAINASVR-VDNEQIRAEVQGLSRAVGARG 203 LL D T L +R A+ + D I VR +++ ++ + L+ A A+ Sbjct: 126 LLNLMDSPGVATDLLAERQRAFAADFIREVDDI---VRPIEDSEVVDKGYELTNAWQAQR 182 Query: 204 QMTLQE---ILVTRGAEAPEAQLR--------NSMITLAGTEPSTLFGMTEVLGVGSPDA 252 ++ Q ++V P+ + + ++++ AG E S L + G Sbjct: 183 RLFEQAMGLVIVKDAYAGPDGREKARTGDIPTSAVVAAAGAESSLLDVLDRYYPKGDERL 242 Query: 253 KTLHQQMVTRMAIISD--PDSVLAGNPQLLQ---SIQITRGIAEQVINDATESVTKXXXX 307 + L + R A+I D+ G +LQ S+ +R + +++ + A + + Sbjct: 243 QALRNNINDRNALIDQGLADAARGGVLPILQLRSSLIASRDVYQELTSAAAKDIAATVQI 302 Query: 308 XXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKV 367 DT GALK A DL I ++ Sbjct: 303 RAAETRSAALRDTAIVLGTLLAALVLALLVSRSLIGPIRRLRYGALKAARRDLPDAIEQI 362 Query: 368 RAGAEPIP---EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRR 424 +A +P EP+ V+++EEIGQ+A AVD++H Q L LAG++A+LR +NDMFET++RR Sbjct: 363 KASDDPRALSFEPVAVHSSEEIGQLARAVDDIHGQALKLAGEQAQLRLQINDMFETLARR 422 Query: 425 SRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREP 484 S+SLVDQQL LI+ LE E+DP+RL++LFRLDHLAAR+RRN NLL+LAG ++ R P Sbjct: 423 SKSLVDQQLGLIENLEFEEKDPKRLESLFRLDHLAARMRRNGENLLILAGTRVRRSQAAP 482 Query: 485 VPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVR 544 +PL V+ AA+SEVEDY+RV+ G + + G V+HLLAEL+DN+L SPP V Sbjct: 483 IPLGDVLRAAISEVEDYQRVQMGATPEGALSGTVVTDVVHLLAELVDNSLRASPPDTVVT 542 Query: 545 VSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARH 604 S R +GGVLL IAD G+G+ D R N RL +G EV P ARHMGLFVV RLA RH Sbjct: 543 FSFARAVDGGVLLEIADRGIGIPADDMRAVNERLASGGEVGPETARHMGLFVVSRLAKRH 602 Query: 605 GIRVGLRGPSXXXXXXXXXXXVYLPRTVLV 634 G+ V LR +++P ++V Sbjct: 603 GLTVRLRSTFDTARNPGVTVSIHIPNALIV 632 Score = 72.8 bits (177), Expect = 2e-10 Identities = 52/149 (34%), Positives = 67/149 (44%), Gaps = 23/149 (15%) Query: 764 VKPGPPSALADPARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPV 823 + P P A P I+ M+S+ +DP A A W S D GWSAA +TPV Sbjct: 816 IDPPPAEAAPRPGGGTPIFSDMVSDWLTDPTG-AEGAPGVWHSAGDAGWSAAERISETPV 874 Query: 824 QSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAV 883 + + GLP R PG RLVPG + A + G +RDP + Sbjct: 875 EVDPEIGLPKRRPGDRLVPGTVEG------------AHNTGT--------LRRVRDPETI 914 Query: 884 RASMSSHFGGVHTGRAH--AHRASQEPDQ 910 RA++S H GV GRA A R S E D+ Sbjct: 915 RANLSRHQQGVRNGRATRLAERNSIEGDR 943 >tr|Q5YPS4|Q5YPS4_NOCFA Tax_Id=37329 SubName: Full=Putative histidine kinase;[Nocardia farcinica] Length = 868 Score = 300 bits (768), Expect = 6e-79 Identities = 215/621 (34%), Positives = 317/621 (51%), Gaps = 20/621 (3%) Query: 24 ESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADV 83 ++AP R +SL NWPV K RI+ + + L A +A + Sbjct: 2 DAAPRSRQ--FSLSNWPVTRKVGIVLLLPVVLASTFAVLRINDELRTIADLDAATDQARI 59 Query: 84 IPAITKYMSALD-VALLASSTGRDVEGPKKNFAARKNE----LQTRLANTNVLSDVRSGV 138 I + ++ SA + +A++ ++ + EG R ++ LQT L + DV + + Sbjct: 60 IRPMLEFASATEQLAVVTATVWENDEGAVDRAGTRFDQAAVDLQTVLRSGGAPEDVINEL 119 Query: 139 NSVLNGGQALLDQTLANT-ISL---RDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQG 194 + + G+ + + +++ +S+ D+V A++ +AI S ++ I+ Sbjct: 120 DEAVTTGRTMRNSLRSSSPVSIGQQADQVAAHIG------NAIARSTSLEEISIQRYFLQ 173 Query: 195 LSRAVGARGQMTLQEILV-TRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAK 253 L AR +T Q +L+ + GAE A +R +++T AG E L ++ + +A Sbjct: 174 LGVTTNARRLLTQQYLLIGSPGAERNPA-VRPTVLTTAGGELVLLSQYAQLQPASALNAN 232 Query: 254 TLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXX 313 L + R+ + A + ++ S++ + ++ +++ Sbjct: 233 ILIDAVNVRLGAFAQNIENPASSQPVIDSLRTSVKAYDESTLSLVDAIDNRLADRTADVR 292 Query: 314 XXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAG-AE 372 D GAL+VAH DL E+ VR+G A Sbjct: 293 GVVLRDIAIVVTTLLAGLALALAVARSLVLPIRRLRHGALQVAHVDLPNELEVVRSGGAT 352 Query: 373 PIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQ 432 P P + V+TTEEIGQ+A AVD++H L LA ++ARLR + MFET+SRRS+SLV+QQ Sbjct: 353 PEPTRVDVHTTEEIGQLARAVDDIHGAALHLAAEQARLRLQIGSMFETLSRRSQSLVEQQ 412 Query: 433 LSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVIS 492 LSLI+ LE +E+D +RL +LFRLDHLA R+RRN NLLVLAG + R H PVPL ++ Sbjct: 413 LSLIEELEHDEDDSQRLQSLFRLDHLATRMRRNGDNLLVLAGTALRRGHLPPVPLSDMLW 472 Query: 493 AAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSE 552 +AVS+VEDY+RVE G D V G A + HLLAELIDNAL YSPPT V VS R + Sbjct: 473 SAVSQVEDYQRVEIGAAPDGVVPGEPAVDIEHLLAELIDNALRYSPPTTSVAVSVARSVD 532 Query: 553 GGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRG 612 GG L+ I D GLGM+ D + N L +G EVT AR MGLFVVGRLA RH I V LR Sbjct: 533 GGYLIEIIDRGLGMSAEDLQTVNSHLASGGEVTVETARRMGLFVVGRLAKRHNITVNLRR 592 Query: 613 PSXXXXXXXXXXXVYLPRTVL 633 S V+LP +++ Sbjct: 593 TSAMTQQPGITASVHLPGSLV 613 Score = 73.6 bits (179), Expect = 1e-10 Identities = 46/122 (37%), Positives = 60/122 (49%), Gaps = 25/122 (20%) Query: 781 IYQKMLSEMTSDPHELANSADLD-WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGAR 839 IYQ+M+SE +P + + W S D GW+AAAEA V RT+ GLP+R PGA+ Sbjct: 763 IYQRMVSEWLVEPASSGSEGEGGGWSSPGDIGWAAAAEASKPQVSGRTNGGLPIRRPGAQ 822 Query: 840 LVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRA 899 LVPG GL P + RDP +R S++ H GV +GRA Sbjct: 823 LVPG--------------------GLAPTNESN----ARDPEEIRNSLTRHLSGVRSGRA 858 Query: 900 HA 901 A Sbjct: 859 DA 860 >tr|C3JDQ4|C3JDQ4_RHOER Tax_Id=596309 SubName: Full=Periplasmic sensor signal transduction histidine kinase;[Rhodococcus erythropolis SK121] Length = 951 Score = 283 bits (723), Expect = 1e-73 Identities = 208/612 (33%), Positives = 303/612 (49%), Gaps = 23/612 (3%) Query: 34 WSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAITKYMSA 93 WS+G W +GWK R+ + ++ L + RA +PA SA Sbjct: 15 WSIGEWRLGWKVIAVLALPMIVAVVLGALRVQTELEGAAQLSSSSERALAVPAAINLESA 74 Query: 94 LDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTL 153 L A+S D + + ++L D+ V S L +++ ++ Sbjct: 75 LYELAEAASARTDTGPATQAVSDAMDQLVDAARAFQSDDDLNDQVTSALAESRSITEEVA 134 Query: 154 ANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQ---IRAEVQGLSRAVGARGQMTLQEI 210 A ++ R+ + V + A + SV V++ Q +R E LS AR + Q I Sbjct: 135 AGAVAPA-RLVSRVGEVSRALSSTFTSV-VEHSQRPALREEGGRLSALWDARRALAEQRI 192 Query: 211 LVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGV-GSPDA-KTLHQQMVTRM-AIIS 267 L G+ P+ Q R SM++ AG E L + +L + GS D +TL R+ A+ S Sbjct: 193 LF--GSGDPDQQARTSMVSAAGAE---LVALNNILAIDGSNDTVRTLSNSAQNRINALGS 247 Query: 268 DPDSVLAGN---PQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXX 324 P + G+ L + + + + ++VT DT Sbjct: 248 TPSTSPLGSRVGTDLKSGNDQYNSLTDTTVTEFGDTVTAESNAARTAALR----DTAIVL 303 Query: 325 XXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIPEP---LPVY 381 AL+ A L I ++RAGA +P+ Sbjct: 304 GAVLLALAIALVISRSLIDPIRRLRFAALQAARRGLPDAIERIRAGASIDDVDFARVPIR 363 Query: 382 TTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLER 441 T EEIG++A AVD++H Q + LAG++A LR VNDMFET+SRR++SLVDQQL LI+ LE+ Sbjct: 364 THEEIGELARAVDDMHGQAITLAGEQATLRRQVNDMFETLSRRNKSLVDQQLGLIEQLEQ 423 Query: 442 NEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDY 501 +E+DP RL+ LFRLDH+AAR+RRN NLLVLAG + R PV L ++ AAVS VE+Y Sbjct: 424 DEDDPRRLENLFRLDHIAARMRRNGDNLLVLAGTDVRRARTAPVALGDILRAAVSGVEEY 483 Query: 502 RRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIAD 561 RRVE G + V G AA V+HL+AEL+DN+L YSPP V ++A R +G +++ IAD Sbjct: 484 RRVELGQIPPGVVTGHAAPDVVHLIAELLDNSLRYSPPETTVSINAARTIDGSMIVEIAD 543 Query: 562 SGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXX 621 G+GM+ +D AN RL AG E++ AR MGLFVV R++ R+ I V LR + Sbjct: 544 LGIGMSPADILDANERLAAGGEMSADTARRMGLFVVSRISRRYNISVRLRPTATSSTHSG 603 Query: 622 XXXXVYLPRTVL 633 V LP ++L Sbjct: 604 ITATVLLPTSIL 615 Score = 58.2 bits (139), Expect = 5e-06 Identities = 43/131 (32%), Positives = 55/131 (41%), Gaps = 26/131 (19%) Query: 781 IYQKMLSEMTSDPHELANSADLD--WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGA 838 I+ +M+SE DP ++A W + D+GW AA + + PV D GLP+R GA Sbjct: 827 IFARMVSEWLVDPTAETSAASTGSAWTTDADQGWLAARTSFEMPVTKIADSGLPIRDRGA 886 Query: 839 RLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGR 898 RLVPGA Q A P RG SS+ GV GR Sbjct: 887 RLVPGAVGRGGTTQRHASNPADVQRG----------------------WSSYQSGVQRGR 924 Query: 899 AHAHRASQEPD 909 A A +PD Sbjct: 925 RRA--ADHQPD 933 >tr|C0ZMJ4|C0ZMJ4_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 951 Score = 281 bits (718), Expect = 4e-73 Identities = 203/610 (33%), Positives = 294/610 (48%), Gaps = 19/610 (3%) Query: 34 WSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAITKYMSA 93 WS+G W +GWK R+ + ++ L + RA +PA SA Sbjct: 15 WSIGEWRLGWKVIAVLALPMIVAVVLGALRVQTELEEAAQLSSSSERALAVPAAINLESA 74 Query: 94 LDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTL 153 L A+S D + + ++L D+ V S L +++ ++ Sbjct: 75 LYELAEAASARTDTGPATQAVSDAMDQLVDAARAFQSDGDLNDQVTSALAESRSITEEIA 134 Query: 154 ANTISLRDRVTAYVPLLLTAEDAINASVRVDNEQIRAEVQG-LSRAVGARGQMTLQEILV 212 A ++ V+ + + V + E G LS AR + Q IL Sbjct: 135 AGAVAPARLVSRVGEVSRALSSTFTSVVEHSQRPVLREQGGRLSALWEARRALAEQRILF 194 Query: 213 TRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGV-GSPDA-KTLHQQMVTRM-AIISDP 269 G+ P+ Q R SM++ AG E L + +L + GS D +TL R+ A+ S P Sbjct: 195 --GSGDPDQQARTSMVSAAGAE---LVALNNILAIDGSNDTVQTLSNSAQNRINALGSTP 249 Query: 270 DSVLAGN---PQLLQSIQITRGIAEQVINDATESVTKXXXXXXXXXXXXXXXDTXXXXXX 326 + G+ L + + + + ++VT DT Sbjct: 250 STSPLGSRVGADLKSGNDQYNSLTDTTVTEFGDTVTAESNAARTAALR----DTAIVLGA 305 Query: 327 XXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIP---EPLPVYTT 383 AL+ A L I ++RAGA +P+ T Sbjct: 306 VLLALAIALVISRSLIDPIRRLRFAALQAARRGLPDAIERIRAGASTDELDFARVPIRTH 365 Query: 384 EEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNE 443 EEIG++A AVD++H Q + LAG++A LR VNDMFET+SRR++SLVDQQL LI+ LE++E Sbjct: 366 EEIGELARAVDDMHGQAITLAGEQATLRRQVNDMFETLSRRNKSLVDQQLGLIEQLEQDE 425 Query: 444 EDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRR 503 +DP RL+ LFRLDH+AAR+RRN NLLVLAG + R PV L + AAVS VE+YRR Sbjct: 426 DDPRRLENLFRLDHIAARMRRNGDNLLVLAGTDVRRARTAPVALGDTLRAAVSGVEEYRR 485 Query: 504 VETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSG 563 VE G + V G AA V+HL+AEL+DN+L YSPP V ++A R +G +++ IAD G Sbjct: 486 VELGQIPPGVVTGHAAPDVVHLIAELLDNSLRYSPPETTVSINAARTIDGSMIVEIADLG 545 Query: 564 LGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXX 623 +GM+ +D AN RL AG E++ AR MGLFVV R++ R+ I V LR + Sbjct: 546 IGMSPADILDANERLAAGGEMSADTARRMGLFVVSRISRRYNISVRLRPTATSSTHSGIT 605 Query: 624 XXVYLPRTVL 633 V LP ++L Sbjct: 606 ATVLLPTSIL 615 Score = 60.1 bits (144), Expect = 1e-06 Identities = 51/173 (29%), Positives = 67/173 (38%), Gaps = 27/173 (15%) Query: 740 SDTAAFFARRSXXXXXXXXXXXXS-VKPGPPSALADPARDDSIYQKMLSEMTSDP--HEL 796 ++TAAFF+ R+ G + + I+ +M+SE DP Sbjct: 785 TNTAAFFSSRTRDGLSARASARADGAGDGNSNGVPSAPTTMPIFARMVSEWLVDPTAETS 844 Query: 797 ANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEAD 856 A S W + D+GW AA + + PV D GLP+R GARLVPGA Q A Sbjct: 845 AASTGSSWTTDADQGWLAARTSFEMPVTKIADSGLPIRDRGARLVPGAVGGGGTTQRHAS 904 Query: 857 RPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRASQEPD 909 P RG SS+ GV GR A A +PD Sbjct: 905 NPADVQRG----------------------WSSYQSGVQRGRRRA--ADHQPD 933 >tr|Q5Z229|Q5Z229_NOCFA Tax_Id=37329 SubName: Full=Putative histidine kinase;[Nocardia farcinica] Length = 1268 Score = 275 bits (702), Expect = 3e-71 Identities = 199/603 (33%), Positives = 290/603 (48%), Gaps = 40/603 (6%) Query: 34 WSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAITKYMSA 93 W+LGNW + WK RI ++ L + IPA+T +SA Sbjct: 12 WALGNWDLRWKVTAVLAVPLAVAVGLGVSRITSEFTEANRLEGVAENIEAIPAVTG-LSA 70 Query: 94 LDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTL 153 + S + G + LS + + + + G L + Sbjct: 71 AAATVAGSQMVSLMPGAS-------------VVTDQDLSQLDQAITTAQDAGAKLRGHSK 117 Query: 154 ANTISLRDRVTAYVPLLLTAE------DAINASVRVDNEQI---RAEVQGLSRAVGARGQ 204 A SL +T +L + DA+ R+ NE + + V +S + Sbjct: 118 AEA-SLETMITEARAILARGKAAAQPTDALGGIDRIRNESVSIVESTVSQVSDPAMDAAK 176 Query: 205 MTLQEILVTRGAEAPEAQLRNSMIT--LAGTEPSTLFGMTE-----VLGVGSPDAKT--- 254 + L + L TR E N ++ AG + T TE VL PD + Sbjct: 177 LRLVDSLNTRATLVAELAAFNEVLHDFKAGVQTFTTASETERQLLNVLAHRFPDGDSAIA 236 Query: 255 -LHQQMVTRMAIISDPDSVLAGNP--QLLQSIQITRGIAEQVINDATESVTKXXXXXXXX 311 L + TR+++I+ P++ P +L S+ + + E+V+ AT+ + Sbjct: 237 DLRAGVDTRLSLINSPEAQAGRLPLGELKNSLTTSVDVYERVVAKATKDIDSAMDNLAGR 296 Query: 312 XXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGA 371 T AL+VA +DL E+A++R GA Sbjct: 297 ANRDAWTYTAVVIATILAALLLAVFVARSMIVPLHRLRLAALRVAESDLPHEVAQLRNGA 356 Query: 372 EP--IP-EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSL 428 P +P EP+P+ +TEEIGQ+A A+D++H Q L LA D+A++RS VNDMFET++RRS+SL Sbjct: 357 SPEDVPLEPMPIRSTEEIGQLARAIDDIHGQALRLASDQAQMRSQVNDMFETLARRSKSL 416 Query: 429 VDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLL 488 VD QLSLI+ +E +E+DP L+ LFRLDHLAAR+RRN NLL+LAG + R PV + Sbjct: 417 VDHQLSLIEAMEYDEKDPRLLENLFRLDHLAARMRRNGDNLLILAGTKQRRAKSAPVEIG 476 Query: 489 TVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAV 548 V+ AA+SEVEDY RV+ G + AA + HL AEL+DNAL SPP V+ + Sbjct: 477 DVLRAAISEVEDYERVKLGATPRGALKEPAASDLAHLFAELLDNALRASPPETDVKFTFA 536 Query: 549 RGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRV 608 + + G+L+ +AD G+GM ++ N +L E P ARHMGLFVVGRLA RHG+ V Sbjct: 537 QAHDQGLLIEVADRGIGMPPAEMAEINRKLEQTAEPGPDTARHMGLFVVGRLAERHGLTV 596 Query: 609 GLR 611 LR Sbjct: 597 RLR 599 Score = 70.1 bits (170), Expect = 1e-09 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 23/131 (17%) Query: 769 PSALADPARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTD 828 P+ + D I+ +M+S +DP+ + + S D GW AA A + + +T Sbjct: 1148 PAVEPGSSMDSPIFAEMMSAWLADPNPDRSQVAASFESPGDEGWQAARRASEAQAEKKTA 1207 Query: 829 HGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMS 888 GLP R PG RLVPGA ADR P RDP ++R+S+S Sbjct: 1208 AGLPQRDPGGRLVPGAVSG------AADRAP-----------------RRDPESIRSSLS 1244 Query: 889 SHFGGVHTGRA 899 H GV GRA Sbjct: 1245 RHQKGVRDGRA 1255 >tr|A3TFR9|A3TFR9_9MICO Tax_Id=313589 SubName: Full=Putative histidine kinase;[Janibacter sp. HTCC2649] Length = 928 Score = 272 bits (695), Expect = 2e-70 Identities = 209/602 (34%), Positives = 299/602 (49%), Gaps = 36/602 (5%) Query: 23 AESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARAD 82 AE PP P +S+ W + K R+ + + +++ Sbjct: 7 AEETPPHDIPWYSIDEWSLRRKLALALAIPVLLAATFGGLRVTSATSEAQSFSRLESKVA 66 Query: 83 VI-PAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSV 141 V+ PA+ S+ VA+ ST A N + L + DVRS + + Sbjct: 67 VLQPAVRLVDSSSAVAVAGRSTDE----------AAVNRARATL--DTAVKDVRSVMRTA 114 Query: 142 -LNGGQAL-LDQTLANTISLRDRVTAYVPLLLTAED--AINASVRVDNEQIRAEVQGLSR 197 L+ Q LDQ +A+ ++R+ TA VP A+ + A V V ++ +E +R Sbjct: 115 GLSDEQVTALDQAVASAQTVRNS-TATVPAETVADQFAEVVAPVTVVLGELTSETSD-TR 172 Query: 198 AVGAR----GQMTL--QEILVTR-GAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSP 250 R GQ+ L Q +L + GA + L N++ G E + + + LG Sbjct: 173 LTSVRDVLAGQLALTKQRLLTAKTGATVDQIALGNAI----GEEATAIASLAGNLGANDT 228 Query: 251 DAKTLHQQMVTRMAIISDPDSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXXXXXXX 310 L R+A A P+ +++ + +A+Q+ +++ + Sbjct: 229 FVDALLTGNELRLAAAPTVSQGTAALPREREAVSVYTTLAKQINGQVVDTMREKASEGRR 288 Query: 311 XXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAG 370 D GAL VAH L + ++RAG Sbjct: 289 AAIR----DAVATIGLLVAAIALALAVARLLLDPITRVRLGALDVAHERLPTALRQIRAG 344 Query: 371 AEPIP-EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLV 429 EP EPLPV+T EE+GQ+A AVD LHA+ + LA +ARLR V+ MFET+SRRS SL+ Sbjct: 345 EEPAAIEPLPVHTGEEVGQLARAVDVLHAEAIFLATQQARLREQVSAMFETLSRRSTSLI 404 Query: 430 DQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLT 489 +QQL LI+ LER+E+DP RL+ LFRLDHLAAR+RRN +LLVLAGA + +PL Sbjct: 405 NQQLGLIENLERDEDDPRRLENLFRLDHLAARIRRNGESLLVLAGAAPRSGAGQDLPLGD 464 Query: 490 VISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVR 549 V+ AAVSEV+DY+RV V+D + AA +IHL AELIDNAL+YSPP + V V++VR Sbjct: 465 VVRAAVSEVQDYQRVRL-AVSDLVIQAGAAPNLIHLFAELIDNALSYSPPDSTVTVASVR 523 Query: 550 GSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVG 609 G +GG L+ ++D GLGMT AN L G EVT AR MGL+VVG+LA RH + V Sbjct: 524 GVDGGTLVEVSDDGLGMTPEAVASANESLVTGGEVTTETARRMGLYVVGQLAIRHDVTVR 583 Query: 610 LR 611 +R Sbjct: 584 IR 585 Score = 60.1 bits (144), Expect = 1e-06 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 28/126 (22%) Query: 775 PARDDSIYQKMLSEMTSDPHELANSADLDWRS-VWDRGWSAAAEAQDTPVQSRTDHGLPV 833 P + I++++ + SD ++ADL W S D+GW AA A R+ GLP+ Sbjct: 799 PVAETPIFRQLQTSWLSD----TDNADLPWASDEIDQGWQAAERAVSAESAGRSRSGLPM 854 Query: 834 RTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGG 893 R PG+ LVPG ++A RDP A+RA ++ H G Sbjct: 855 RRPGSTLVPGQVGQ-----------------------GANSAVARDPEAIRAHLNRHLAG 891 Query: 894 VHTGRA 899 V GRA Sbjct: 892 VRRGRA 897 >tr|Q0S027|Q0S027_RHOSR Tax_Id=101510 SubName: Full=Probable sensor kinase;[Rhodococcus sp.] Length = 689 Score = 263 bits (673), Expect = 6e-68 Identities = 189/609 (31%), Positives = 288/609 (47%), Gaps = 16/609 (2%) Query: 18 PVASGAESAPPKRPPAWSLGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLA 77 P A G P A + WP+ WK R+ + ++ Sbjct: 5 PAAVGGFRRPRGIWSARGVAGWPLRWKMAVVLTVPLTVAAGLGFLRVQQSLTAAADFTTV 64 Query: 78 DARADVIPAITKYMSALDVALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSG 137 RA ++P + + V + + N A +++ + S Sbjct: 65 SERAQILPLLVELDGHAAVVMGTLALRTISTSMSDNLDASIVDVENANTANTLDEGAASD 124 Query: 138 VNSVLNGGQALLDQTL---ANTISLRDRVTAYVPLLLTAEDAINASV---RVDNEQIRAE 191 V + L+G +AL Q +T +L ++ + L +A AI A + V E +R E Sbjct: 125 VATALSGARALSAQAKRGPTSTEALTAQLASIRSALSSAVGAITAPIADPEVVVETVRLE 184 Query: 192 -VQGLSRAVGARGQMTLQEILVTRGAEAP--EAQLRNSMITLAGTEPSTLFGMTEVLGVG 248 + + V A+G + + G EA+ N + L TE + L + + G Sbjct: 185 GLWAAQKLVSAQGLSVVASTAILTGESGANLEAESVNLLANLR-TESALLDQVEQRYPPG 243 Query: 249 SPDAKTLHQQMVTRMAIISDP---DSVLAGNPQLLQSIQITRGIAEQVINDATESVTKXX 305 P TL + R A++ + +S L S+ + I A+ + Sbjct: 244 DPTMTTLRNGVNDRTALLPEVAHRESADRALTDLKNSLIASVDDYSNAIATASADLKDAV 303 Query: 306 XXXXXXXXXXXXXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIA 365 DT GAL+VAH DL + Sbjct: 304 VAKSAALRTQAWRDTGVVTALLLAAILLAVVVARSLLQPLRRLRRGALRVAHADLPDAVG 363 Query: 366 KVRAGAEPIP---EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMS 422 ++++GA+ +P+ V+T EEIGQ+A A+D++H+Q L+LA ++A+LR +N++FET++ Sbjct: 364 RLKSGADASTLEFDPIDVHTHEEIGQLARAIDDIHSQALLLASEQAQLRLQMNNVFETLA 423 Query: 423 RRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHR 482 RRSRSL+D QL +I+ LE E DP+RLD LFRLDHLA R+RRN NLL+LAG R Sbjct: 424 RRSRSLIDLQLEMIEQLEFEERDPKRLDNLFRLDHLATRMRRNGDNLLILAGNDNRRGRP 483 Query: 483 EPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAP 542 P+ L + AA+SEVEDY+RV + T+ GAA ++H+LAEL+DN+L++SPP + Sbjct: 484 APILLGDAMRAAISEVEDYQRVRVCAMPPVTLTGAAGRDLVHVLAELLDNSLHFSPPDSA 543 Query: 543 VRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAA 602 V + R +GGV++ IAD G+GM SD N R+ + EVTP ARHMGLFVV L+ Sbjct: 544 VTTTCARTIDGGVVIEIADRGIGMAPSDLHELNDRVASTPEVTPDTARHMGLFVVSELSK 603 Query: 603 RHGIRVGLR 611 RH I + LR Sbjct: 604 RHNITITLR 612 >tr|Q5YZ71|Q5YZ71_NOCFA Tax_Id=37329 SubName: Full=Putative histidine kinase;[Nocardia farcinica] Length = 713 Score = 263 bits (671), Expect = 1e-67 Identities = 203/621 (32%), Positives = 281/621 (45%), Gaps = 49/621 (7%) Query: 36 LGNWPVGWKXXXXXXXXXXXXXXXXXXRIHGGMANSSGLRLADARADVIPAITKYMSALD 95 L W + WK RI +A ++ A A V+PA+ SA+D Sbjct: 20 LARWRLRWKVAAVLALPVCVAAVLAATRIQHELAQAAEFGAAAETAQVVPAVVNLGSAVD 79 Query: 96 VALLASSTGRDVEGPKKNFAARKNELQTRLANTNVLSDVRSGVNSVLNGGQALLDQTLAN 155 L D +EL L + D R D+ LA Sbjct: 80 TLALTRLGATDPSAAAHEVDTATDELARLLDRS--ARDHRE------------FDEPLAA 125 Query: 156 TISLRDRVTAYVPL--LLTAEDAINAS--------VRVDN-EQIRAEVQGLSRAVGARGQ 204 LRDR+ P L T +AI+ + V VD E I + + A AR Sbjct: 126 VGMLRDRLMIATPPADLATRVEAIHVALLSAVTRAVAVDGAENIDRFTEQFTDAWDARRA 185 Query: 205 MTLQEILVTRGAEAPEAQLRNSMITLAGTEPSTLFGMTEVLGVGSPDAKTLHQQMVTRMA 264 +T Q IL + A++R + G E + + + + A V + Sbjct: 186 LTTQRILAETVGDDAAARVR--LTFPLGAEAAAIERLAAD-SAAADVALVADSIQVRQNM 242 Query: 265 IISDPDSVLAGNPQLLQSIQ--------ITRGIAEQVINDATESVTKXXXXXXXXXXXXX 316 + D D V A P +S+ + GIA ++++ A Sbjct: 243 FLGDADPVRA--PHYTESVTAAARHYDTLLAGIATELVDSADAQAAAARAAALR------ 294 Query: 317 XXDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALKVAHTDLEGEIAKVRAGAEPIPE 376 DT GAL A DL + ++RAGA P E Sbjct: 295 --DTAWVIGALLAALTFALLVAQSLIAPLRRLRLGALHTARRDLPAALERIRAGAAPEAE 352 Query: 377 P---LPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQL 433 L + T EE+ ++A A+D+LH Q + LAG++A R VNDMFET+SRR+R+L+DQQL Sbjct: 353 SNTKLALGTGEELDELAQAIDQLHGQAIRLAGEQAATRRQVNDMFETLSRRNRALIDQQL 412 Query: 434 SLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISA 493 LI+ LE +E DP RL +LFRLDHL R+RRN NLLVLAG ++ R+ PV L V+ A Sbjct: 413 GLIEELEHDEADPSRLRSLFRLDHLVTRMRRNGNNLLVLAGTRVRRNRAVPVDLAEVLQA 472 Query: 494 AVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEG 553 A+SEVED+ RV D + GA A ++HLLAEL+DNAL +SPP A V +S G Sbjct: 473 AMSEVEDFHRVRLLSGPDVEIAGAVAPDLVHLLAELLDNALRFSPPDAAVDLSVAASISG 532 Query: 554 GVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLRGP 613 G+++ I D+G+GM++ D AN + AG ++ AR MGLFVVGRLA RHG+ V LR Sbjct: 533 GIVIEIVDTGIGMSDEDMEHANRTVAAGGAISVETARRMGLFVVGRLAERHGVTVALRRT 592 Query: 614 SXXXXXXXXXXXVYLPRTVLV 634 S V +P LV Sbjct: 593 SPETVRGGVTAAVGVPAQALV 613 >tr|C1AWA0|C1AWA0_RHOOB Tax_Id=632772 SubName: Full=Putative uncharacterized protein;[Rhodococcus opacus] Length = 883 Score = 258 bits (660), Expect = 2e-66 Identities = 135/286 (47%), Positives = 189/286 (66%), Gaps = 3/286 (1%) Query: 351 GALKVAHTDLEGEIAKVRAGAEPIP---EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDE 407 GAL+VAH DL G + ++++G E +P+ V+T EEIGQVA A+D++H Q L+LAG++ Sbjct: 349 GALQVAHADLPGAVERLKSGTEATTLQVDPIDVHTHEEIGQVARAIDDIHNQALMLAGEQ 408 Query: 408 ARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSA 467 A LR +N++FET++RRSRSL+D QL +I+ LE E DP+RLD LFRLDHLA R+RRN Sbjct: 409 AHLRLQMNNVFETLARRSRSLIDLQLEMIEQLEFEERDPKRLDNLFRLDHLATRMRRNGD 468 Query: 468 NLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLA 527 NLL+LAG R P+ L + A++SEVE Y+RV+ V + GAA ++H+LA Sbjct: 469 NLLILAGNSNRRGRPAPIQLGDAVRASISEVEHYQRVQVQPVPPVALTGAAGRDLVHVLA 528 Query: 528 ELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPA 587 EL+DN+L++SPP + V + R +GG+++ I D G+GM+ +D R N R+ + +VTP Sbjct: 529 ELLDNSLHFSPPDSAVTTTCARTIDGGIVIEIVDRGIGMSPTDLRELNDRIASTPQVTPG 588 Query: 588 NARHMGLFVVGRLAARHGIRVGLRGPSXXXXXXXXXXXVYLPRTVL 633 ARHMGLFVV LA RH I V LR V++P VL Sbjct: 589 TARHMGLFVVSELAKRHDITVTLRPTLDRPRNTGITASVHVPGDVL 634 Score = 60.8 bits (146), Expect = 8e-07 Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 24/140 (17%) Query: 774 DPARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPV 833 DP I+ + +DP + A W + D GWSAA A TD GLP Sbjct: 762 DPTTQTPIFASIAPLWLTDPAKTATDVSQRWVTRADTGWSAARRAALGSQAPVTDSGLPQ 821 Query: 834 RTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGG 893 R PG RLVPG D D+ Q +R P +RA ++ H G Sbjct: 822 RVPGQRLVPGGVDVDD----------------------QAPVRVRTPEMIRAHLTRHQSG 859 Query: 894 VHTGRAHAHR--ASQEPDQQ 911 V GR S +P QQ Sbjct: 860 VRAGRTGTRSVLGSLDPWQQ 879 >tr|C4E240|C4E240_STRRS Tax_Id=479432 SubName: Full=Nitrate/nitrite-sensing histidine kinase with HAMP domain;[Streptosporangium roseum DSM 43021] Length = 934 Score = 234 bits (598), Expect = 3e-59 Identities = 128/266 (48%), Positives = 178/266 (66%), Gaps = 4/266 (1%) Query: 352 ALKVAHTDLEGEIAKVRAGAEPIPE----PLPVYTTEEIGQVAHAVDELHAQVLVLAGDE 407 AL+VA T L + +R + P + V + +EIG+VA A DE+H + + LAGDE Sbjct: 340 ALEVADTRLPETVRVLRESGDLAPNVEVPSIGVVSRDEIGEVARAFDEVHREAIRLAGDE 399 Query: 408 ARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSA 467 ARLR+ VN MF +SRR++SLV++Q+ LID LE+ E+D RL +LF+LDHLA R+RRNS Sbjct: 400 ARLRNNVNAMFVNLSRRTQSLVERQIDLIDDLEQGEQDDSRLASLFKLDHLATRMRRNSE 459 Query: 468 NLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLA 527 NLLVLAG + SR EPVPL V+ A++SEVE+Y RV + ++IG+A ++HL+A Sbjct: 460 NLLVLAGQEQSRRWSEPVPLSDVVRASLSEVENYERVSLRVESGTSIIGSAVNDIVHLIA 519 Query: 528 ELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPA 587 EL++NA+ +SP + VS+ G ++L + D+G+GM+E + AN RL V + Sbjct: 520 ELVENAIFFSPQDTKITVSSNGNETGAIILAVTDAGIGMSEEELAEANRRLAEPPAVDLS 579 Query: 588 NARHMGLFVVGRLAARHGIRVGLRGP 613 +R MGLFVVGRLA RHGIRV LR P Sbjct: 580 VSRRMGLFVVGRLAMRHGIRVQLRRP 605 Score = 44.7 bits (104), Expect = 0.060 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 19/102 (18%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 W + D+GW+AA A+ T GLP R P A LVPG+A + PA+ Sbjct: 844 WSTPADQGWAAAEVAKKPVEGGTTGAGLPKRVPKANLVPGSASA----------APAT-- 891 Query: 864 GLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRAS 905 P P +A R VR+ +SS GV GRA + S Sbjct: 892 ---PPPPMPPISAER----VRSRLSSFQQGVRQGRAEMNERS 926 >tr|C4E252|C4E252_STRRS Tax_Id=479432 SubName: Full=Signal transduction histidine kinase, COG0642;[Streptosporangium roseum DSM 43021] Length = 1049 Score = 234 bits (597), Expect = 4e-59 Identities = 130/263 (49%), Positives = 176/263 (66%), Gaps = 3/263 (1%) Query: 352 ALKVAHTDLEGEIAKVRAGAEPIPE---PLPVYTTEEIGQVAHAVDELHAQVLVLAGDEA 408 AL +A L + +R E E P+ V + +EIGQVA A DE+H + + LAG EA Sbjct: 407 ALSIAGQRLPDTVQSMRESGEAAAEDIAPIGVASDDEIGQVARAFDEVHREAVRLAGQEA 466 Query: 409 RLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSAN 468 LRS VN MF +SRRS++LV++QLSLI+ LE+ E+D RL +LFRLDHLA R+RRNS N Sbjct: 467 TLRSNVNAMFVNLSRRSQTLVERQLSLIESLEQGEQDESRLGSLFRLDHLATRMRRNSEN 526 Query: 469 LLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAE 528 LLVLAG + +R +P+PL+ V+ A++SEVE+Y RV+ A V+G + V+HL+AE Sbjct: 527 LLVLAGQEPARRWSQPIPLIDVVRASLSEVENYERVDLRLSAGVAVVGTSVNDVVHLIAE 586 Query: 529 LIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPAN 588 L++NA+++SP V VS+ R GGV++ + D G+GMT + AN RL V + Sbjct: 587 LVENAISFSPRETKVVVSSNRIDGGGVMVSVTDIGIGMTPEELGQANWRLANPPVVDVSV 646 Query: 589 ARHMGLFVVGRLAARHGIRVGLR 611 +R MGLFVVGRLA RHGIRV LR Sbjct: 647 SRRMGLFVVGRLALRHGIRVQLR 669 Score = 51.2 bits (121), Expect = 6e-04 Identities = 36/98 (36%), Positives = 40/98 (40%), Gaps = 16/98 (16%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 W S D GW AA A + + T GLP R P A LVPG A A D Sbjct: 944 WSSPADAGWQAAQAASEPSLGGITGSGLPKRVPKANLVPGTA--------------APDP 989 Query: 864 GLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 G P P P AVR ++S GV GRA A Sbjct: 990 GAAPQTPVLRPTV--SPEAVRNRLASFQQGVRQGRAAA 1025 >tr|C4E228|C4E228_STRRS Tax_Id=479432 SubName: Full=Signal transduction histidine kinase, COG0642;[Streptosporangium roseum DSM 43021] Length = 877 Score = 233 bits (593), Expect = 1e-58 Identities = 129/264 (48%), Positives = 180/264 (68%), Gaps = 4/264 (1%) Query: 352 ALKVAHTDLEGEIAKVRAG--AEPIPE--PLPVYTTEEIGQVAHAVDELHAQVLVLAGDE 407 AL+VA L + +VR E I E P+ V + +EIG+VA A DE+H + + LAG+E Sbjct: 354 ALRVAGERLPAYVQQVRESRDGEIIAEVPPIGVMSRDEIGEVARAFDEVHREAVRLAGEE 413 Query: 408 ARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSA 467 A+LR+ VN MF +SRRS++LV++QL+L++ LER E D +RL LF+LDHLA R+RRNS Sbjct: 414 AKLRNTVNAMFVNLSRRSQTLVERQLTLVERLERGERDDQRLADLFKLDHLATRMRRNSE 473 Query: 468 NLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLA 527 NLLVLAG +++R R+PV L+ V+ A++SEVE+Y RV ++ V G A V+HLLA Sbjct: 474 NLLVLAGQEVARRWRQPVELMDVVRASLSEVENYDRVTVQVQSEAAVAGPAVSDVVHLLA 533 Query: 528 ELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPA 587 EL++NA+++SP + V VS+ R GGV++ + D G+GM + + AN RL + Sbjct: 534 ELVENAVSFSPKDSRVVVSSSRIDGGGVMISVTDQGIGMVQEELSQANWRLAHPQAADAS 593 Query: 588 NARHMGLFVVGRLAARHGIRVGLR 611 AR MGLFVVGRLA +HGIRV LR Sbjct: 594 VARRMGLFVVGRLALKHGIRVQLR 617 Score = 49.7 bits (117), Expect = 0.002 Identities = 40/108 (37%), Positives = 47/108 (43%), Gaps = 17/108 (15%) Query: 791 SDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEP 850 +DP E A + W S D GW AA A + T GLP RTP A LVPG+ Sbjct: 779 ADPAEPAPAEPAVWSSPADTGWQAAQAASVPALGGTTTSGLPRRTPKANLVPGSV----- 833 Query: 851 NQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGR 898 + PP P QPA +A R VR+ MSS GV R Sbjct: 834 --NPLPGPP------QPPQPAVPISAER----VRSRMSSFQQGVRKAR 869 >tr|C1YUZ8|C1YUZ8_NOCDA Tax_Id=446468 SubName: Full=Signal transduction histidine kinase, COG0642;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1075 Score = 230 bits (587), Expect = 6e-58 Identities = 131/266 (49%), Positives = 173/266 (65%), Gaps = 6/266 (2%) Query: 350 DGALKVAHTDLEGEIAKVRAGAEPIPE-----PLPVYTTEEIGQVAHAVDELHAQVLVLA 404 DGA +VA DL I +++ A +PE P+ V T +EIG+VA A D++H L LA Sbjct: 343 DGARRVAERDLPDAINRMQE-AGTVPENVKVTPIEVDTHDEIGEVARAFDDVHRVALTLA 401 Query: 405 GDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRR 464 DEA LRS VN MF +SRRS++LV++QL LIDGLE++E+D +RL LF+LDHLA R+RR Sbjct: 402 SDEAALRSNVNAMFVNLSRRSQTLVERQLRLIDGLEQSEQDADRLSDLFQLDHLATRMRR 461 Query: 465 NSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIH 524 N+ NLLVL+G +R +PVPL+ V+ AVSEVE Y RV + +V+G VIH Sbjct: 462 NNENLLVLSGQDNTRKWAQPVPLVDVLRGAVSEVEQYERVNVRAPSHISVLGRPVNDVIH 521 Query: 525 LLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEV 584 L+AEL++NA ++SP V VSA GGV + + DSG+GM D N RL A + Sbjct: 522 LVAELVENATSFSPHDTEVLVSAKTLDNGGVQVDVTDSGIGMAPEDMAAINARLAAPPVI 581 Query: 585 TPANARHMGLFVVGRLAARHGIRVGL 610 A +R MGLFVV RLA RHG+R+ L Sbjct: 582 DVAVSRRMGLFVVSRLAHRHGVRLRL 607 Score = 45.4 bits (106), Expect = 0.035 Identities = 22/47 (46%), Positives = 24/47 (51%) Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDE 849 +W S DRGW AA A + T GLP R P A LVPG A E Sbjct: 991 EWTSEADRGWKAARTAAEPKADGLTPSGLPKRVPKANLVPGTAPKPE 1037 >tr|C6WHX4|C6WHX4_ACTMD Tax_Id=446462 SubName: Full=Putative sensor with HAMP domain;[Actinosynnema mirum] Length = 1092 Score = 229 bits (585), Expect = 1e-57 Identities = 126/267 (47%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 352 ALKVAHTDLEGEIAKVRAGAEPIPE------PLPVYTTEEIGQVAHAVDELHAQVLVLAG 405 AL VA L + K+ A P P+P+ T EE+GQVA A D +H + + LA Sbjct: 381 ALDVADKGLPEAVEKILADPNPQEAAKTAIAPVPITTREEVGQVARAFDAVHGEAVRLAA 440 Query: 406 DEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRN 465 ++A LR VN MF +SRRS++LV++QL+LID LE++E+DP++L +LF LDHLA R+RRN Sbjct: 441 EQAMLRDNVNAMFVNLSRRSQALVERQLNLIDRLEQDEQDPDQLASLFELDHLATRMRRN 500 Query: 466 SANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHL 525 S NLL+L+G +SR PVP+ V+ AAVSEVE Y RV+ G + TV G A ++HL Sbjct: 501 SENLLMLSGTDLSRRLTRPVPVAEVLGAAVSEVEQYARVQVGQTPELTVQGRAVNDLVHL 560 Query: 526 LAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVT 585 +AEL+DNA +S P V V R +G + + I D G+GM++ D R AN RL +V Sbjct: 561 IAELLDNATAFSDPVTKVTVRTARTRKGELAIEIQDRGVGMSDQDLRDANERLANPPDVD 620 Query: 586 PANARHMGLFVVGRLAARHGIRVGLRG 612 A +R MGL+VV RLA RH ++V LRG Sbjct: 621 VAVSRRMGLYVVARLAKRHDVKVRLRG 647 Score = 50.4 bits (119), Expect = 0.001 Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 21/126 (16%) Query: 791 SDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEP 850 ++P A+ A + W+S D GW AA + + T GLP R P A+LVPG+A Sbjct: 981 AEPAAKASPASV-WQSPADEGWQAAQSLLSSTPDATTQAGLPKRKPKAQLVPGSAAPLAG 1039 Query: 851 NQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGR-----AHAHRAS 905 + +PP LPP R + +R MSS GV GR A+A S Sbjct: 1040 ATQQPQQPP-----LPP----------RSADVIRGRMSSLQQGVRRGRHALIDAYAGDMS 1084 Query: 906 QEPDQQ 911 D++ Sbjct: 1085 SRQDEE 1090 >tr|O86522|O86522_STRCO Tax_Id=1902 SubName: Full=Putative membrane protein SC1C2.21c;[Streptomyces coelicolor] Length = 1111 Score = 225 bits (574), Expect = 2e-56 Identities = 117/236 (49%), Positives = 162/236 (68%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 +P+P+ +T+EIG+VA A D++H + + LA ++A LR +N +F +SRR++SL++ QLSL Sbjct: 469 QPIPITSTDEIGEVARAFDQVHREAVRLAAEQALLRGNINAIFTNLSRRNQSLIEGQLSL 528 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE NE DP++L+ LFRLDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA Sbjct: 529 ITDLENNEADPDQLENLFRLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLVDVLRAAS 588 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G V Sbjct: 589 SEVEQYERIELSGVPEAEIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRV 648 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRL+ RHGIRV LR Sbjct: 649 MVEIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLSDRHGIRVQLR 704 Score = 41.2 bits (95), Expect = 0.66 Identities = 22/61 (36%), Positives = 27/61 (44%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 WRS D W A+ + T GLP R P A LV GAA++ + R P R Sbjct: 1012 WRSANDDRWQQASSLRKPKAGGVTSSGLPRRVPKANLVEGAAETTPQGGPQVSRAPEDVR 1071 Query: 864 G 864 G Sbjct: 1072 G 1072 >tr|D1ACN8|D1ACN8_THECU Tax_Id=471852 SubName: Full=Putative sensor with HAMP domain; Flags: Precursor;[Thermomonospora curvata DSM 43183] Length = 973 Score = 225 bits (574), Expect = 2e-56 Identities = 128/267 (47%), Positives = 174/267 (65%), Gaps = 6/267 (2%) Query: 350 DGALKVAHTDLEGEIAKVR-----AGAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLA 404 D AL+VA T L G + ++R AG + EP+ + +T+EIGQVA A DE+H + + LA Sbjct: 345 DSALEVAGTRLPGLVERLRDPQAAAGGIEV-EPIDIDSTDEIGQVARAFDEVHREAVRLA 403 Query: 405 GDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRR 464 DEA LR +N MF +SRR +SL+++QL LID LE+NE+D E+L LF+LDHLA R+RR Sbjct: 404 ADEAVLRGNINAMFVNLSRRMQSLIERQLRLIDELEQNEQDSEQLANLFQLDHLATRMRR 463 Query: 465 NSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIH 524 N NLLVL G + R +PVPL+ ++ A++SEVE Y RV +D +V G ++H Sbjct: 464 NCENLLVLGGQEQVRRWNQPVPLIDIVRASLSEVEQYERVTLRVQSDVSVTGQVVNDLVH 523 Query: 525 LLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEV 584 L+AEL++NA +SP V VS S GG +L+I D+G+G++ D AN RL + Sbjct: 524 LVAELVENATVFSPQHTKVTVSGHLLSGGGAMLQITDNGVGISPEDLEQANWRLANPPVI 583 Query: 585 TPANARHMGLFVVGRLAARHGIRVGLR 611 + AR MGLFVVGRLA RH IRV LR Sbjct: 584 DFSAARRMGLFVVGRLAMRHNIRVELR 610 Score = 42.7 bits (99), Expect = 0.23 Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 18/103 (17%) Query: 799 SADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRP 858 S W+S D GW AA + T GLP R PG VPGA +Q RP Sbjct: 855 SGGQSWKSPGDAGWQAAQVVRQPASGGVTKAGLPKRVPGRNRVPGAV-----SQQPVSRP 909 Query: 859 PASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHA 901 H + + +R +S GVH GR+ A Sbjct: 910 -------------THIGPNQSADRMRDRFASLQRGVHRGRSEA 939 >tr|C9Z568|C9Z568_STRSW Tax_Id=680198 SubName: Full=RarA (Conservon) homolog;[Streptomyces scabies] Length = 1013 Score = 224 bits (572), Expect = 3e-56 Identities = 116/235 (49%), Positives = 161/235 (68%) Query: 377 PLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLI 436 P+P+ TT+EIG+VA A D++H + + LA ++A LR +N +F +SRR++SL++ QL+LI Sbjct: 371 PIPINTTDEIGEVARAFDQVHREAVRLAAEQALLRGNINAIFTNLSRRNQSLIEGQLTLI 430 Query: 437 DGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVS 496 LE NE DP++L+ LF+LDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA S Sbjct: 431 TDLENNEADPDQLENLFKLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLIDVLRAASS 490 Query: 497 EVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVL 556 EVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G V+ Sbjct: 491 EVEQYERIELSGVPEAEIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRVM 550 Query: 557 LRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 + I D G+G+T D N +L V A ++ MGLFVVGRL+ RHGIRV LR Sbjct: 551 IEIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLSDRHGIRVQLR 605 Score = 43.5 bits (101), Expect = 0.13 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 788 EMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADS 847 E+T D A + DWRS D W A++ + T GLP R P A LV GAA + Sbjct: 899 EVTQD-QPTAGGPNGDWRSDNDARWQQASQLKKPKAGGVTSSGLPRRVPKANLVEGAAQT 957 Query: 848 DEPNQDEADRPPASDRG 864 + R P RG Sbjct: 958 TPQGGPQISRAPEDVRG 974 >tr|C7QFA8|C7QFA8_CATAD Tax_Id=479433 SubName: Full=Putative sensor with HAMP domain;[Catenulispora acidiphila] Length = 1560 Score = 224 bits (572), Expect = 3e-56 Identities = 129/264 (48%), Positives = 174/264 (65%), Gaps = 4/264 (1%) Query: 352 ALKVAHTDLEGEIAKVRA--GAEPIPE--PLPVYTTEEIGQVAHAVDELHAQVLVLAGDE 407 AL++A L + ++R G+EPI P+ + +T+E+GQVA A DE+H + + LA ++ Sbjct: 425 ALEIAGNRLPEMVRRLRDADGSEPIEPIAPIALSSTDEVGQVARAFDEVHREAVRLATEQ 484 Query: 408 ARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSA 467 A LR+ VN MF +SRRS+SLV +QL LID LE E+DP++L +LF+LDHLA R+RRN Sbjct: 485 AMLRNNVNAMFTNLSRRSQSLVQRQLRLIDELENAEQDPDQLASLFKLDHLATRMRRNGE 544 Query: 468 NLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLA 527 NLLVLAG + R +PVPL+ V+ AA SEVE Y RV + V G A V+HL+A Sbjct: 545 NLLVLAGEEPGRRWSQPVPLIDVLRAAASEVEQYERVTLRDLPTVEVAGRAVNDVVHLVA 604 Query: 528 ELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPA 587 EL++NA ++S P V V+ + GGV+L I DSG+GMT + +N RL V A Sbjct: 605 ELLENATSFSAPETKVSVTGNLLNTGGVMLEIEDSGIGMTPEELDDSNERLANPPVVDVA 664 Query: 588 NARHMGLFVVGRLAARHGIRVGLR 611 +R MGLFVVGRLA RHGI+V LR Sbjct: 665 ISRRMGLFVVGRLATRHGIQVRLR 688 Score = 52.4 bits (124), Expect = 3e-04 Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 26/138 (18%) Query: 766 PGPPSALAD-----PARDDSIYQKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQD 820 P PP+A A PAR + +++ MT D +SA W S D GW AA + Sbjct: 1409 PTPPAAPAADPFGAPARPAAPHEEPKEPMTDDQ----SSAGQTWHSPGDDGWKAAEVVKK 1464 Query: 821 TPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDRGLPPDQPAQHTAAMRDP 880 T GLP R P + LVPG+AD + + P PA R Sbjct: 1465 PVAAGLTPKGLPKRVPRSNLVPGSADG-----------TGAAKVAPSPIPA------RSA 1507 Query: 881 NAVRASMSSHFGGVHTGR 898 AVR+ ++S G+ GR Sbjct: 1508 EAVRSRLASFHNGLRQGR 1525 >tr|A4FN81|A4FN81_SACEN Tax_Id=405948 SubName: Full=Putative uncharacterized protein;[Saccharopolyspora erythraea] Length = 1156 Score = 224 bits (571), Expect = 4e-56 Identities = 124/264 (46%), Positives = 176/264 (66%), Gaps = 2/264 (0%) Query: 352 ALKVAHTDLEGEIAKVRAGAEPIP-EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARL 410 AL A T L ++ + G +P E +PV+TTEE+G+VA A D +H+Q + LA ++A L Sbjct: 373 ALDTASTQLPQAVSDILDGYDPEEIEQVPVHTTEEVGEVARAFDTVHSQAVALAAEQAGL 432 Query: 411 RSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSANLL 470 R +D F +SRRS+SL+++QL L + LER+EEDP++L TLF+LDHLA R+RRN+ NL+ Sbjct: 433 RRSYSDSFINVSRRSQSLLERQLRLFEQLERDEEDPDQLATLFQLDHLATRMRRNNENLM 492 Query: 471 VLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELI 530 VL+G+ ++R PVP ++ AAVSE+E Y RV + + V+G AAG ++ LLAEL+ Sbjct: 493 VLSGSDLARRFTRPVPPADLVRAAVSEIEHYPRVIVQPLPEARVLGYAAGDLVRLLAELL 552 Query: 531 DNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPANAR 590 DNA N+S P V V+ R +G +++ I D G+GM + AN RL + E+ + +R Sbjct: 553 DNAANFSAPQTNVMVTGHRRGDGELVIDIVDRGIGMGADELDAANDRLLSDGEIELSTSR 612 Query: 591 HMGLFVVGRLAARHGIRVGLR-GP 613 MGLFVVGRLAARH I V L GP Sbjct: 613 RMGLFVVGRLAARHDIDVELHPGP 636 Score = 37.4 bits (85), Expect = 9.5 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 21/113 (18%) Query: 795 ELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDE 854 + A+ +W D+ A E + T GLP+R P A LV G+A Sbjct: 954 DAADGTGTNWAFTNDQARRRAEEVSAAEPEDYTSVGLPLRVPRANLVAGSA--------- 1004 Query: 855 ADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRASQE 907 + G P + RDP+A R +SS G+ GR H H + + Sbjct: 1005 ----AGAHNGDP-------SLLQRDPDAARGRLSSFQNGLRRGR-HRHEPTAQ 1045 >tr|Q82JQ6|Q82JQ6_STRAW Tax_Id=33903 (cvnA7)SubName: Full=Putative sensor-like histidine kinase;[Streptomyces avermitilis] Length = 1081 Score = 223 bits (567), Expect = 1e-55 Identities = 116/236 (49%), Positives = 161/236 (68%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 + +P+ TT+EIG+VA A D++H + + LA ++A LR +N +F +SRR++SL++ QL+L Sbjct: 440 QAIPITTTDEIGEVARAFDQVHREAVRLAAEQALLRGNINAIFTNLSRRNQSLIEGQLTL 499 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE NE DP++L+ LFRLDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA Sbjct: 500 ITDLENNEADPDQLENLFRLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLVDVLRAAS 559 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y RVE GV + + G A ++HLLAEL++NA +S P VRV+A R +G + Sbjct: 560 SEVEQYERVELSGVPEAEIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRI 619 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRL+ RHGIRV LR Sbjct: 620 MVEIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLSDRHGIRVQLR 675 Score = 43.5 bits (101), Expect = 0.13 Identities = 23/62 (37%), Positives = 28/62 (45%) Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASD 862 +WRS D W A++ + T GLP R P A LV G ADS + R P Sbjct: 986 NWRSSNDERWQQASQLKKPKAGGVTSSGLPRRVPKANLVEGTADSTPQGGPQVSRAPEDV 1045 Query: 863 RG 864 RG Sbjct: 1046 RG 1047 >tr|C9NL01|C9NL01_9ACTO Tax_Id=591167 SubName: Full=Putative sensor with HAMP domain; Flags: Precursor;[Streptomyces flavogriseus ATCC 33331] Length = 1018 Score = 223 bits (567), Expect = 1e-55 Identities = 116/236 (49%), Positives = 162/236 (68%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 +P+P+ + +EIG+VA A D++H + + LA ++A LR VN +F +SRR++SL++ QL+L Sbjct: 396 QPIPINSQDEIGEVARAFDQVHREAVRLAAEQAMLRGNVNAIFTNLSRRNQSLIEGQLTL 455 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE NE DP++L++LF+LDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA Sbjct: 456 ITDLENNEADPDQLESLFKLDHLATRMRRNGENLLVLAGEEPGRRWNQPVPLVDVLRAAS 515 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G V Sbjct: 516 SEVESYERIELTGVPESEIHGQAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRV 575 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRLA RHGIRV LR Sbjct: 576 MVEIHDKGIGLTAEDFADINHKLANPPTVDAAVSQRMGLFVVGRLADRHGIRVQLR 631 Score = 47.4 bits (111), Expect = 0.009 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Query: 783 QKMLSEMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVP 842 Q+ + E +P + A DWRS D W A + +D T GLP R P A LV Sbjct: 912 QRPVPERPQEPSD--GDAPEDWRSANDERWERAEKLRDPKAGGITPSGLPRRVPKANLVE 969 Query: 843 GAADSDEPNQDEADRPPASDRG 864 G A+ + + R P RG Sbjct: 970 GTAEQTQQGGPQVSRAPEDVRG 991 >tr|C6WA48|C6WA48_ACTMD Tax_Id=446462 SubName: Full=Putative sensor with HAMP domain;[Actinosynnema mirum] Length = 1060 Score = 223 bits (567), Expect = 1e-55 Identities = 124/266 (46%), Positives = 170/266 (63%), Gaps = 6/266 (2%) Query: 352 ALKVAHTDLEGEIAKVRA------GAEPIPEPLPVYTTEEIGQVAHAVDELHAQVLVLAG 405 AL VA L I ++R AE P+P++TTEE+GQVA A D + + + LA Sbjct: 397 ALDVARNRLPDAIKRIRTHRDPERAAEESLVPVPIHTTEEVGQVARAFDAVQREAIRLAV 456 Query: 406 DEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRN 465 ++ LR+ VNDMF +SRRS++LV++Q+++ID LE++E+DP++L +LF LDHLA ++RRN Sbjct: 457 EQVALRANVNDMFINLSRRSQALVERQITVIDRLEQDEQDPDQLASLFELDHLATQMRRN 516 Query: 466 SANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHL 525 S NLLVL+G ++R PVP+ V+ AAVSEVE Y RV D V G + HL Sbjct: 517 SENLLVLSGTTVTRRVTRPVPITEVLGAAVSEVEKYARVHIAPAPDLRVQGRVVNDLAHL 576 Query: 526 LAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVT 585 +AEL+DNA +S P+ V V A+ G V +RI D G+GM E D AN++L EV Sbjct: 577 IAELLDNATAFSKPSTKVTVRAIETRRGEVSIRIHDRGVGMQEQDVVEANLKLSEPPEVD 636 Query: 586 PANARHMGLFVVGRLAARHGIRVGLR 611 + AR MGL+VVG+LA RH I V LR Sbjct: 637 VSVAREMGLYVVGQLAKRHEIHVSLR 662 >tr|B5HM61|B5HM61_9ACTO Tax_Id=463191 SubName: Full=Signal transduction histidine kinase;[Streptomyces sviceus ATCC 29083] Length = 1096 Score = 223 bits (567), Expect = 1e-55 Identities = 115/235 (48%), Positives = 160/235 (68%) Query: 377 PLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLI 436 P+P+ T +EIG+VA A D++H + + LA ++A LR +N +F +SRR++SL++ QL+LI Sbjct: 446 PIPITTKDEIGEVARAFDQVHREAVRLASEQALLRGNINAIFTNLSRRNQSLIEGQLTLI 505 Query: 437 DGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVS 496 LE NE DP++L+ LFRLDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA S Sbjct: 506 TDLENNEADPDQLENLFRLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLVDVLRAASS 565 Query: 497 EVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVL 556 EVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G ++ Sbjct: 566 EVEQYERIELSGVPEAEIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRIM 625 Query: 557 LRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 + I D G+G+T D N +L V A ++ MGLFVVGRL+ RHGIRV LR Sbjct: 626 IEIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLSDRHGIRVQLR 680 Score = 42.4 bits (98), Expect = 0.30 Identities = 21/61 (34%), Positives = 28/61 (45%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 WRS D W A++ + T GLP R P A L+ GAA++ + R P R Sbjct: 1002 WRSANDARWQQASQLRKPKAGGVTSSGLPRRVPKANLIEGAAEATNQGGPQVSRAPEDVR 1061 Query: 864 G 864 G Sbjct: 1062 G 1062 >tr|B1VZ13|B1VZ13_STRGG Tax_Id=455632 SubName: Full=Putative sensor-like histidine kinase;[Streptomyces griseus subsp. griseus] Length = 1075 Score = 222 bits (565), Expect = 2e-55 Identities = 115/236 (48%), Positives = 162/236 (68%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 +P+P+ T +EIG+VA A D++H + + LA ++A LR VN +F +SRR++SL++ QL+L Sbjct: 446 QPIPITTQDEIGEVARAFDQVHREAVRLAAEQAMLRGNVNAIFTNLSRRNQSLIEGQLTL 505 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE NE DP++L++LF+LDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA Sbjct: 506 ITDLENNEADPDQLESLFKLDHLATRMRRNGENLLVLAGEEPGRRWNQPVPLVDVLRAAS 565 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y R++ GV + + G A ++HLLAEL++NA +S P V+V+A R +G V Sbjct: 566 SEVESYERIQLTGVPESEIHGQAVTDLVHLLAELLENATTFSSPQTKVKVTATRLPDGRV 625 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRLA RHGIRV LR Sbjct: 626 MVEIHDKGIGLTAEDFADINHKLANPPTVDAAVSQRMGLFVVGRLADRHGIRVQLR 681 Score = 45.1 bits (105), Expect = 0.046 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Query: 788 EMTSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADS 847 E +P + D DWRS D W A + ++ T GLP R P A LV G A+ Sbjct: 973 EQRQEPQTDGDGTD-DWRSTNDERWERAEKLREPKAGGITPSGLPRRVPKANLVEGTAEQ 1031 Query: 848 DEPNQDEADRPPASDRG 864 + + R P RG Sbjct: 1032 TQQGGPQVSRAPEDVRG 1048 >tr|C4E219|C4E219_STRRS Tax_Id=479432 SubName: Full=Nitrate/nitrite-sensing histidine kinase with HAMP domain;[Streptosporangium roseum DSM 43021] Length = 945 Score = 222 bits (565), Expect = 2e-55 Identities = 127/263 (48%), Positives = 176/263 (66%), Gaps = 3/263 (1%) Query: 352 ALKVAHTDLEGEIAKVR-AGAEPIPE--PLPVYTTEEIGQVAHAVDELHAQVLVLAGDEA 408 AL VA L + ++R +G PE + V T +EIG+VA A DE+H Q + LA +E+ Sbjct: 341 ALDVAGFTLPEVVRRLRVSGDSQTPEIASISVDTKDEIGEVAKAFDEVHRQAVRLAAEES 400 Query: 409 RLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRNSAN 468 LRS ++ MF +SRR+++LV++Q+SLIDGLE+ EED RL LF+LDHLA R+RRNS N Sbjct: 401 ELRSNISAMFVNLSRRTQTLVERQISLIDGLEKGEEDGGRLADLFKLDHLATRMRRNSEN 460 Query: 469 LLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHLLAE 528 LLVLAG + +R +P L+ V+ A++SEVEDY RV+ +V G+AA ++HL+AE Sbjct: 461 LLVLAGHEPTRRRSQPAKLVDVVRASLSEVEDYERVQVKVHRTISVAGSAANDIVHLVAE 520 Query: 529 LIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVTPAN 588 L++NA+ +SP + V VS+ GG LL ++D+G+GMT + N RL V + Sbjct: 521 LVENAIQFSPRASQVVVSSSMIEGGGALLAVSDAGIGMTTEELIETNRRLADPPVVDVSV 580 Query: 589 ARHMGLFVVGRLAARHGIRVGLR 611 +R MGLFVVGRLA RHGIRV LR Sbjct: 581 SRRMGLFVVGRLALRHGIRVQLR 603 Score = 48.9 bits (115), Expect = 0.003 Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 22/96 (22%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 W++ D GW AA A D + T GLP RTP A LVPGAA S Sbjct: 855 WQTPADAGWQAAQAASDPTLGGITSAGLPKRTPKANLVPGAAAS---------------- 898 Query: 864 GLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRA 899 P P + P VR+ +SS GV GRA Sbjct: 899 --VPSTPMPSLS----PERVRSRLSSFQQGVRRGRA 928 >tr|B5HGJ2|B5HGJ2_STRPR Tax_Id=457429 SubName: Full=Putative uncharacterized protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 1097 Score = 221 bits (564), Expect = 3e-55 Identities = 115/236 (48%), Positives = 161/236 (68%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 +P+P+ T +EIG+VA A D++H + + LA ++A LR VN +F +S+R++SL++ QL+L Sbjct: 451 QPIPIDTQDEIGEVARAFDQVHREAVRLAAEQAMLRGNVNAIFTNLSQRNQSLIEGQLTL 510 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE NE DP++L+ LF+LDHLA R+RRN NLL+LAG + R +PVPL+ V+ AA Sbjct: 511 ITDLENNEADPDQLENLFKLDHLATRMRRNGENLLILAGEEPGRRWNQPVPLVDVLRAAS 570 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G V Sbjct: 571 SEVESYERIELTGVPETEIHGQAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRV 630 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRLA RHGIRV LR Sbjct: 631 MVEIHDKGIGLTAEDFADINHKLANPPTVDAAVSQRMGLFVVGRLADRHGIRVQLR 686 Score = 44.3 bits (103), Expect = 0.078 Identities = 22/62 (35%), Positives = 27/62 (43%) Query: 803 DWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASD 862 DWRS D W A + +D T GLP R P A L+ G A+ + R P Sbjct: 1002 DWRSANDERWQRAEKLRDPKAGGVTSSGLPRRVPKANLIEGTAEQTPQGGPQVSRAPEDV 1061 Query: 863 RG 864 RG Sbjct: 1062 RG 1063 >tr|B5GIY5|B5GIY5_9ACTO Tax_Id=465543 SubName: Full=Histidine kinase;[Streptomyces sp. SPB74] Length = 1107 Score = 221 bits (563), Expect = 4e-55 Identities = 115/235 (48%), Positives = 160/235 (68%) Query: 377 PLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLI 436 PLP+ +T+EIG+VA A D++H + + LA ++A LR +N +F ++RR++SL++ QL+LI Sbjct: 414 PLPITSTDEIGEVARAFDQVHREAVRLASEQALLRGNINAIFTNLARRNQSLIEGQLALI 473 Query: 437 DGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVS 496 LE NE +PE+L+ LF+LDHLA R+RRN NLLVLAG + R +PVPL+ V+ AA S Sbjct: 474 TDLENNEAEPEQLENLFKLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLVDVLRAAAS 533 Query: 497 EVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVL 556 EVE Y RVE GV + + G A ++HLL+EL++NA +S P VRV+A R +G V+ Sbjct: 534 EVEQYERVELSGVPEAEIHGRAVTDLVHLLSELLENATTFSSPQTKVRVTATRMPDGRVM 593 Query: 557 LRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 + I D G+G+ D N RL V A ++ MGLFVVGRL+ RHGIRV LR Sbjct: 594 IEIHDKGIGLNAEDFADINHRLANPPVVDAAISQRMGLFVVGRLSDRHGIRVQLR 648 >tr|Q47RD9|Q47RD9_THEFY Tax_Id=269800 SubName: Full=Signal transduction histidine kinase; EC=2.7.3.-;[Thermobifida fusca] Length = 1077 Score = 219 bits (559), Expect = 1e-54 Identities = 126/267 (47%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 350 DGALKVAHTDLEGEIAKVRAGAEPIPE-----PLPVYTTEEIGQVAHAVDELHAQVLVLA 404 DGA+++A DL I ++R PE PL V +++E G+VA + DE+H L LA Sbjct: 389 DGAMRIAAKDLPEAIVRMRE-TNVRPEEVKITPLEVDSSDEFGEVARSFDEVHRSALRLA 447 Query: 405 GDEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRR 464 DEA LR+ VN MF +SRRS+SLV++QL LI+ LE++E+D ERL LF+LDHLA R+RR Sbjct: 448 ADEAALRANVNAMFVNLSRRSQSLVERQLRLIEHLEQSEQDEERLAELFQLDHLATRMRR 507 Query: 465 NSANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIH 524 N+ NLLVL+G +R +PVPL+ V+ AAVSEVE Y RV + +V+G VIH Sbjct: 508 NNENLLVLSGQDNTRKWAQPVPLVDVLRAAVSEVEQYARVNVRAPSHVSVLGRPVNDVIH 567 Query: 525 LLAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEV 584 L+AEL++NA +S V V+A G +++ I DSG+GM+ + AN +L + Sbjct: 568 LIAELVENATVFSAHDTQVSVTAQAVDNGDIIIEITDSGIGMSAEELESANQKLAEPPVI 627 Query: 585 TPANARHMGLFVVGRLAARHGIRVGLR 611 A +R MGLFVV RLA RHGI V LR Sbjct: 628 DVAVSRRMGLFVVSRLANRHGIEVRLR 654 Score = 48.5 bits (114), Expect = 0.004 Identities = 39/107 (36%), Positives = 47/107 (43%), Gaps = 23/107 (21%) Query: 803 DWRSVWDRGWSAAAEAQDTPVQSR-TDHGLPVRTPGARLVPGAADSDEPNQDEADRPPAS 861 +WRS D GW AAE P+ T GLP R P A LVPGAA + Sbjct: 991 EWRSAADAGWKTAAERASAPIAGGITASGLPKRIPRANLVPGAAPA-------------- 1036 Query: 862 DRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGR-AHAHRASQE 907 P+ Q T+ R VR+ SS G+ GR A R+SQE Sbjct: 1037 -----PENFKQITS--RSAERVRSRFSSFQQGIRQGRDALNKRSSQE 1076 >tr|C7N0J1|C7N0J1_SACVD Tax_Id=471857 SubName: Full=Nitrate/nitrite-sensing histidine kinase with HAMP domain protein;[Saccharomonospora viridis] Length = 996 Score = 218 bits (554), Expect = 4e-54 Identities = 120/266 (45%), Positives = 170/266 (63%), Gaps = 6/266 (2%) Query: 352 ALKVAHTDLEGEIAKVRAGAEPIPE------PLPVYTTEEIGQVAHAVDELHAQVLVLAG 405 AL+VA+ L + ++ A P+ P+PV+T EEIG++A + D +H + + LA Sbjct: 324 ALEVAYVRLPETVRRILADPNPMEASREAVTPVPVHTREEIGELARSFDVVHERAVRLAA 383 Query: 406 DEARLRSLVNDMFETMSRRSRSLVDQQLSLIDGLERNEEDPERLDTLFRLDHLAARLRRN 465 ++A LR VN +F +SRRS+ LV++QLS+ID LE +E+DP++L +LF LDHLA RLRRN Sbjct: 384 EQALLRENVNGIFVNLSRRSQRLVERQLSIIDKLESDEQDPDQLASLFELDHLATRLRRN 443 Query: 466 SANLLVLAGAQISRDHREPVPLLTVISAAVSEVEDYRRVETGGVADCTVIGAAAGAVIHL 525 +LLVL+GA +++ +PVP V+ AAVSE+E Y RVE G + D V G A ++HL Sbjct: 444 GESLLVLSGAGLTKTMSKPVPAADVLGAAVSEIEQYSRVELGTIPDVAVHGRAVHDLVHL 503 Query: 526 LAELIDNALNYSPPTAPVRVSAVRGSEGGVLLRIADSGLGMTESDRRMANMRLHAGVEVT 585 LAEL+DNA +S P + V AV + ++I D G+GM+E AN RL ++ Sbjct: 504 LAELLDNATYFSEPETKISVRAVVTRRTSLAIQITDRGVGMSEEQLAEANERLATPPDLD 563 Query: 586 PANARHMGLFVVGRLAARHGIRVGLR 611 + R MGL+VV RLA RHGI V LR Sbjct: 564 VSVTRRMGLYVVARLAKRHGIEVRLR 589 Score = 45.8 bits (107), Expect = 0.027 Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 10/121 (8%) Query: 790 TSDPHELANSADLDWRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDE 849 ++D ++ D+ W S D GW AA + T GLP R P A LVPG+ S Sbjct: 871 STDDKTTDSARDIGWYSAADSGWQAAHALLEEKHAEITPAGLPKRVPNAYLVPGSVSSSR 930 Query: 850 PNQDEADRPPASDRGLPPDQPAQHTAAMRDPNAVRASMSSHFGGVHTGRAHAHRASQEPD 909 N AD A + G +A R A R M S G +GR S + + Sbjct: 931 GNA-FAD-TTAGEPG--------RSAVARSAEAARNRMKSFQRGYQSGRHALKEPSAQSE 980 Query: 910 Q 910 Q Sbjct: 981 Q 981 >tr|B5H076|B5H076_STRCL Tax_Id=443255 SubName: Full=Signal transduction histidine kinase;[Streptomyces clavuligerus ATCC 27064] Length = 884 Score = 216 bits (551), Expect = 9e-54 Identities = 114/236 (48%), Positives = 159/236 (67%) Query: 376 EPLPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSL 435 EP+P+ + +EIG+VA A D++H + + LA ++A LR VN +F +SRR++SL++ QL+L Sbjct: 451 EPIPIDSRDEIGEVARAFDQVHREAVRLAAEQAMLRGNVNAIFTNLSRRNQSLIEGQLTL 510 Query: 436 IDGLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAV 495 I LE +E DP++L +LFRLDHLA R+RRN NLL+LAG +P+PL+ V+ AA Sbjct: 511 ITELENSEADPDQLASLFRLDHLATRMRRNGENLLILAGEDPGSRWDQPIPLVDVLRAAS 570 Query: 496 SEVEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGV 555 SEVE Y R+E GV + + G A ++HLLAEL++NA +S P VRV+A R +G V Sbjct: 571 SEVESYERIELSGVPETDIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRV 630 Query: 556 LLRIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 ++ I D G+G+T D N +L V A ++ MGLFVVGRLA RHGIRV LR Sbjct: 631 MVEIHDKGIGLTPEDFADINHKLANPPVVDAAVSQRMGLFVVGRLADRHGIRVQLR 686 >tr|B4V584|B4V584_9ACTO Tax_Id=465541 SubName: Full=Membrane protein;[Streptomyces sp. Mg1] Length = 1068 Score = 215 bits (548), Expect = 2e-53 Identities = 113/234 (48%), Positives = 158/234 (67%) Query: 378 LPVYTTEEIGQVAHAVDELHAQVLVLAGDEARLRSLVNDMFETMSRRSRSLVDQQLSLID 437 +P+ + +EIG+VA A D++H + + LA ++A LR VN +F +S R++SL++ QL+LI Sbjct: 458 IPIDSQDEIGEVARAFDQVHREAVRLAAEQALLRGNVNAIFTNLSMRNQSLIEGQLTLIT 517 Query: 438 GLERNEEDPERLDTLFRLDHLAARLRRNSANLLVLAGAQISRDHREPVPLLTVISAAVSE 497 LE NE DP++L+ LFRLDHLA R+RRN NLL+LAG + R +PVPL+ V+ AA SE Sbjct: 518 DLENNEADPDQLENLFRLDHLATRMRRNGENLLILAGEEPGRRWDQPVPLVDVLRAASSE 577 Query: 498 VEDYRRVETGGVADCTVIGAAAGAVIHLLAELIDNALNYSPPTAPVRVSAVRGSEGGVLL 557 VE Y R+E GV++ + G A ++HLLAEL++NA +S P VRV+A R +G V++ Sbjct: 578 VEQYERIELSGVSEAEIHGQAVTDLVHLLAELLENATTFSSPQTKVRVNATRLPDGRVMV 637 Query: 558 RIADSGLGMTESDRRMANMRLHAGVEVTPANARHMGLFVVGRLAARHGIRVGLR 611 I D G+G+T D N +L V A ++ MGLFVVGRLA RH IRV LR Sbjct: 638 EIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLADRHSIRVQLR 691 Score = 42.7 bits (99), Expect = 0.23 Identities = 22/61 (36%), Positives = 28/61 (45%) Query: 804 WRSVWDRGWSAAAEAQDTPVQSRTDHGLPVRTPGARLVPGAADSDEPNQDEADRPPASDR 863 WRS D W A + ++ T GLP R P A LV GAA++ + R P R Sbjct: 980 WRSANDERWQQAGKLREPKAGGVTPSGLPRRVPKANLVEGAAETTPQGGPQVSRAPEDVR 1039 Query: 864 G 864 G Sbjct: 1040 G 1040 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.314 0.130 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 5,352,884,536 Number of extensions: 201927186 Number of successful extensions: 557002 Number of sequences better than 10.0: 3078 Number of HSP's gapped: 564992 Number of HSP's successfully gapped: 3156 Length of query: 911 Length of database: 3,846,993,858 Length adjustment: 147 Effective length of query: 764 Effective length of database: 2,189,539,017 Effective search space: 1672807808988 Effective search space used: 1672807808988 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 85 (37.4 bits)