BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1247 (172 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HDY9|B2HDY9_MYCMM Tax_Id=216594 (rsbW)SubName: Full=Anti-si... 340 3e-92 tr|A0PRK0|A0PRK0_MYCUA Tax_Id=362242 (rsbW)SubName: Full=Anti-si... 280 3e-74 tr|Q73UG1|Q73UG1_MYCPA Tax_Id=1770 (rsbW)SubName: Full=RsbW;[Myc... 269 7e-71 tr|C6DL24|C6DL24_MYCTK Tax_Id=478434 SubName: Full=Anti-sigma fa... 253 7e-66 tr|Q7BP98|Q7BP98_MYCBO Tax_Id=1765 (rsbW)SubName: Full=Anti-sigm... 253 7e-66 tr|P96892|P96892_MYCTU Tax_Id=1773 (usfX)SubName: Full=UsfX;[Myc... 253 7e-66 tr|A5WSK2|A5WSK2_MYCTF Tax_Id=336982 SubName: Full=Anti-sigma fa... 253 7e-66 tr|A4KLI3|A4KLI3_MYCTU Tax_Id=395095 SubName: Full=Anti-sigma fa... 253 7e-66 tr|A2VP83|A2VP83_MYCTU Tax_Id=348776 SubName: Full=Anti-sigma fa... 253 7e-66 tr|A0QKG1|A0QKG1_MYCA1 Tax_Id=243243 SubName: Full=RsbW protein;... 243 4e-63 tr|Q7TWT4|Q7TWT4_MYCBO Tax_Id=1765 (rsbW)SubName: Full=ANTI-SIGM... 237 4e-61 tr|Q7D5S1|Q7D5S1_MYCTU Tax_Id=1773 (rsbW)SubName: Full=ANTI-SIGM... 237 4e-61 tr|C1AH61|C1AH61_MYCBT Tax_Id=561275 (rsbW)SubName: Full=Anti-si... 237 4e-61 tr|A5U7W1|A5U7W1_MYCTA Tax_Id=419947 (rsbW)SubName: Full=Anti-si... 237 4e-61 tr|A1KNT9|A1KNT9_MYCBP Tax_Id=410289 (rsbW)SubName: Full=Anti-si... 237 4e-61 tr|A1T5N8|A1T5N8_MYCVP Tax_Id=350058 SubName: Full=Putative anti... 196 1e-48 tr|A4TF19|A4TF19_MYCGI Tax_Id=350054 SubName: Full=Putative anti... 190 6e-47 tr|A3PW34|A3PW34_MYCSJ Tax_Id=164757 SubName: Full=Putative anti... 183 5e-45 tr|Q1BCJ2|Q1BCJ2_MYCSS Tax_Id=164756 SubName: Full=Putative anti... 183 7e-45 tr|A1UCF1|A1UCF1_MYCSK Tax_Id=189918 SubName: Full=Putative anti... 183 7e-45 tr|A0QTD7|A0QTD7_MYCS2 Tax_Id=246196 SubName: Full=RsbW protein;... 162 1e-38 tr|Q8GR89|Q8GR89_MYCSM Tax_Id=1772 (usfX)SubName: Full=Putative ... 162 1e-38 tr|B1MBH3|B1MBH3_MYCA9 Tax_Id=561007 SubName: Full=Anti-sigma fa... 125 2e-27 tr|Q49667|Q49667_MYCLE Tax_Id=1769 SubName: Full=B1308_F3_89;[My... 100 8e-20 tr|Q0SEW2|Q0SEW2_RHOSR Tax_Id=101510 SubName: Full=Possible anti... 92 3e-17 tr|A0QTC0|A0QTC0_MYCS2 Tax_Id=246196 SubName: Full=RsbW protein;... 89 1e-16 tr|C1B083|C1B083_RHOOB Tax_Id=632772 SubName: Full=Putative anti... 89 2e-16 tr|C7MSF4|C7MSF4_SACVD Tax_Id=471857 SubName: Full=Putative unch... 80 1e-13 tr|C3JIJ7|C3JIJ7_RHOER Tax_Id=596309 SubName: Full=Putative unch... 78 4e-13 tr|C0ZUP2|C0ZUP2_RHOE4 Tax_Id=234621 SubName: Full=Anti-sigma fa... 77 5e-13 tr|A4FHE0|A4FHE0_SACEN Tax_Id=405948 (rsbW)SubName: Full=Anti-si... 76 2e-12 tr|Q5YTN9|Q5YTN9_NOCFA Tax_Id=37329 SubName: Full=Putative anti-... 75 3e-12 tr|A4FLE6|A4FLE6_SACEN Tax_Id=405948 (rsbW)SubName: Full=Anti-si... 73 1e-11 tr|Q75NJ1|Q75NJ1_SACER Tax_Id=1836 (prsH)SubName: Full=Putative ... 73 1e-11 tr|Q5YW84|Q5YW84_NOCFA Tax_Id=37329 SubName: Full=Putative anti-... 68 3e-10 tr|Q0SKK1|Q0SKK1_RHOSR Tax_Id=101510 SubName: Full=Anti-sigma fa... 68 4e-10 tr|C7MYT1|C7MYT1_SACVD Tax_Id=471857 SubName: Full=Putative unch... 67 6e-10 tr|C1ASL5|C1ASL5_RHOOB Tax_Id=632772 SubName: Full=Putative anti... 65 3e-09 tr|C6W9Z2|C6W9Z2_ACTMD Tax_Id=446462 SubName: Full=Putative anti... 65 3e-09 tr|A3RDW0|A3RDW0_RHOOP Tax_Id=37919 SubName: Full=Putative anti-... 65 4e-09 tr|Q5Z3J3|Q5Z3J3_NOCFA Tax_Id=37329 SubName: Full=Putative anti-... 64 5e-09 tr|C9ZAC0|C9ZAC0_STRSW Tax_Id=680198 (prs)SubName: Full=Anti-sig... 62 2e-08 tr|C7QCR8|C7QCR8_CATAD Tax_Id=479433 SubName: Full=Putative anti... 62 3e-08 tr|Q7AKF8|Q7AKF8_STRCO Tax_Id=1902 SubName: Full=Anti-sigma fact... 61 4e-08 tr|Q9R3X8|Q9R3X8_STRCO Tax_Id=100226 (prsH)SubName: Full=PrsH pr... 61 4e-08 tr|B5HN08|B5HN08_9ACTO Tax_Id=463191 SubName: Full=Anti-sigma fa... 61 4e-08 tr|Q82IX0|Q82IX0_STRAW Tax_Id=33903 (rsbW1)SubName: Full=Putativ... 61 5e-08 tr|B4V971|B4V971_9ACTO Tax_Id=465541 SubName: Full=Anti-sigma fa... 60 7e-08 tr|C7MZS4|C7MZS4_SACVD Tax_Id=471857 SubName: Full=Putative unch... 60 9e-08 tr|B5HB88|B5HB88_STRPR Tax_Id=457429 SubName: Full=Anti-sigma fa... 60 9e-08 >tr|B2HDY9|B2HDY9_MYCMM Tax_Id=216594 (rsbW)SubName: Full=Anti-sigma factor RsbW;[Mycobacterium marinum] Length = 172 Score = 340 bits (873), Expect = 3e-92 Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR Sbjct: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC Sbjct: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR Sbjct: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 >tr|A0PRK0|A0PRK0_MYCUA Tax_Id=362242 (rsbW)SubName: Full=Anti-sigma factor RsbW;[Mycobacterium ulcerans] Length = 145 Score = 280 bits (717), Expect = 3e-74 Identities = 143/145 (98%), Positives = 143/145 (98%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSATPDATLTLVVDPRDDELVVQASAAC THDVVA GSFSWHVLTSLADDVQTFH Sbjct: 61 CTRLIRSATPDATLTLVVDPRDDELVVQASAACSTHDVVALGSFSWHVLTSLADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGRPPEAAGSVFGIMLTARRVASGR Sbjct: 121 DGRPPEAAGSVFGIMLTARRVASGR 145 >tr|Q73UG1|Q73UG1_MYCPA Tax_Id=1770 (rsbW)SubName: Full=RsbW;[Mycobacterium paratuberculosis] Length = 172 Score = 269 bits (688), Expect = 7e-71 Identities = 138/172 (80%), Positives = 147/172 (85%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MTNRL+R G QS S+V LPG M DA +KR RGHRAVEL+VAARLENL+MLR Sbjct: 1 MTNRLERTVHGGLQSSSSVSRPLPGDHMKDAGLHADKRPRGHRAVELHVAARLENLAMLR 60 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATL +VVDP+DD+LVV+ASAAC Sbjct: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLIVVVDPQDDQLVVEASAAC 120 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLTSLADDVQTFHDGR P AGSVFGI LTARR AS R Sbjct: 121 DTHDVVAPGSFSWHVLTSLADDVQTFHDGREPNEAGSVFGITLTARRAASSR 172 >tr|C6DL24|C6DL24_MYCTK Tax_Id=478434 SubName: Full=Anti-sigma factor rsbW;[Mycobacterium tuberculosis] Length = 208 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 41 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 96 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 97 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 156 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 157 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 208 >tr|Q7BP98|Q7BP98_MYCBO Tax_Id=1765 (rsbW)SubName: Full=Anti-sigma factor RsbW;[Mycobacterium bovis] Length = 242 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 75 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 130 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 131 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 190 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 191 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 242 >tr|P96892|P96892_MYCTU Tax_Id=1773 (usfX)SubName: Full=UsfX;[Mycobacterium tuberculosis] Length = 242 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 75 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 130 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 131 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 190 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 191 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 242 >tr|A5WSK2|A5WSK2_MYCTF Tax_Id=336982 SubName: Full=Anti-sigma factor rsbW (Sigma negative effector);[Mycobacterium tuberculosis] Length = 208 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 41 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 96 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 97 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 156 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 157 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 208 >tr|A4KLI3|A4KLI3_MYCTU Tax_Id=395095 SubName: Full=Anti-sigma factor rsbW (Sigma negative effector);[Mycobacterium tuberculosis str. Haarlem] Length = 208 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 41 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 96 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 97 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 156 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 157 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 208 >tr|A2VP83|A2VP83_MYCTU Tax_Id=348776 SubName: Full=Anti-sigma factor rsbW (Sigma negative effector);[Mycobacterium tuberculosis C] Length = 208 Score = 253 bits (645), Expect = 7e-66 Identities = 133/172 (77%), Positives = 144/172 (83%), Gaps = 4/172 (2%) Query: 1 MTNRLQRWAQSGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLR 60 MT++L+ Q G STV LPGG M D+D R+RG RAVELNVAARLENL++LR Sbjct: 41 MTDQLEDQTQGG----STVDRSLPGGCMADSDLPTKGRQRGVRAVELNVAARLENLALLR 96 Query: 61 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAAC 120 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSA PDATL LVVDPR DE+VV+ASAAC Sbjct: 97 TLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAAC 156 Query: 121 GTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 THDVVAPGSFSWHVLT+LADDVQTFHDGR P+ AGSVFGI LTARR AS R Sbjct: 157 DTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR 208 >tr|A0QKG1|A0QKG1_MYCA1 Tax_Id=243243 SubName: Full=RsbW protein;[Mycobacterium avium] Length = 145 Score = 243 bits (621), Expect = 4e-63 Identities = 124/145 (85%), Positives = 131/145 (90%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M DA +KR RGHRAVEL+VAARLENL+MLRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MKDAGLHADKRPRGHRAVELHVAARLENLAMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSATPDATL +VVDP+DD+LVV+ASAAC THDVVAPGSFSWHVLTSLADDVQTFH Sbjct: 61 CTRLIRSATPDATLIVVVDPQDDQLVVEASAACDTHDVVAPGSFSWHVLTSLADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P AGSVFGI LTARR AS R Sbjct: 121 DGREPNEAGSVFGITLTARRAASSR 145 >tr|Q7TWT4|Q7TWT4_MYCBO Tax_Id=1765 (rsbW)SubName: Full=ANTI-SIGMA FACTOR RSBW (SIGMA NEGATIVE EFFECTOR);[Mycobacterium bovis] Length = 145 Score = 237 bits (604), Expect = 4e-61 Identities = 121/145 (83%), Positives = 129/145 (88%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M D+D R+RG RAVELNVAARLENL++LRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSA PDATL LVVDPR DE+VV+ASAAC THDVVAPGSFSWHVLT+LADDVQTFH Sbjct: 61 CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P+ AGSVFGI LTARR AS R Sbjct: 121 DGRQPDVAGSVFGITLTARRAASSR 145 >tr|Q7D5S1|Q7D5S1_MYCTU Tax_Id=1773 (rsbW)SubName: Full=ANTI-SIGMA FACTOR RSBW (SIGMA NEGATIVE EFFECTOR); SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 145 Score = 237 bits (604), Expect = 4e-61 Identities = 121/145 (83%), Positives = 129/145 (88%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M D+D R+RG RAVELNVAARLENL++LRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSA PDATL LVVDPR DE+VV+ASAAC THDVVAPGSFSWHVLT+LADDVQTFH Sbjct: 61 CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P+ AGSVFGI LTARR AS R Sbjct: 121 DGRQPDVAGSVFGITLTARRAASSR 145 >tr|C1AH61|C1AH61_MYCBT Tax_Id=561275 (rsbW)SubName: Full=Anti-sigma factor;[Mycobacterium bovis] Length = 145 Score = 237 bits (604), Expect = 4e-61 Identities = 121/145 (83%), Positives = 129/145 (88%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M D+D R+RG RAVELNVAARLENL++LRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSA PDATL LVVDPR DE+VV+ASAAC THDVVAPGSFSWHVLT+LADDVQTFH Sbjct: 61 CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P+ AGSVFGI LTARR AS R Sbjct: 121 DGRQPDVAGSVFGITLTARRAASSR 145 >tr|A5U7W1|A5U7W1_MYCTA Tax_Id=419947 (rsbW)SubName: Full=Anti-sigma factor RsbW;[Mycobacterium tuberculosis] Length = 145 Score = 237 bits (604), Expect = 4e-61 Identities = 121/145 (83%), Positives = 129/145 (88%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M D+D R+RG RAVELNVAARLENL++LRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSA PDATL LVVDPR DE+VV+ASAAC THDVVAPGSFSWHVLT+LADDVQTFH Sbjct: 61 CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P+ AGSVFGI LTARR AS R Sbjct: 121 DGRQPDVAGSVFGITLTARRAASSR 145 >tr|A1KNT9|A1KNT9_MYCBP Tax_Id=410289 (rsbW)SubName: Full=Anti-sigma factor rsbW;[Mycobacterium bovis] Length = 145 Score = 237 bits (604), Expect = 4e-61 Identities = 121/145 (83%), Positives = 129/145 (88%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M D+D R+RG RAVELNVAARLENL++LRTLVGAIGTFEDLDFDAVADLRLAVDEV Sbjct: 1 MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRLIRSA PDATL LVVDPR DE+VV+ASAAC THDVVAPGSFSWHVLT+LADDVQTFH Sbjct: 61 CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH 120 Query: 148 DGRPPEAAGSVFGIMLTARRVASGR 172 DGR P+ AGSVFGI LTARR AS R Sbjct: 121 DGRQPDVAGSVFGITLTARRAASSR 145 >tr|A1T5N8|A1T5N8_MYCVP Tax_Id=350058 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Mycobacterium vanbaalenii] Length = 163 Score = 196 bits (497), Expect = 1e-48 Identities = 102/160 (63%), Positives = 119/160 (74%), Gaps = 1/160 (0%) Query: 11 SGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFE 70 +G + KL GGQM D IN R +G ++VEL VAA LENL++LRTLV AIGTFE Sbjct: 3 NGRSGWGNLAGKLLGGQMADVASHINGRRQGAQSVELRVAATLENLAVLRTLVAAIGTFE 62 Query: 71 DLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGS 130 DLDFDAVADLRLAVDE CTRLIRSA PD+TL +VVDP+ D LVV AS C + D++APGS Sbjct: 63 DLDFDAVADLRLAVDEACTRLIRSAVPDSTLLVVVDPQPDALVVHASTTCDSTDILAPGS 122 Query: 131 FSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVAS 170 FSWHVL+SL DDV+TF DGR G VFGI +T RR +S Sbjct: 123 FSWHVLSSLTDDVKTFSDGR-SVGDGEVFGISMTTRRASS 161 >tr|A4TF19|A4TF19_MYCGI Tax_Id=350054 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Mycobacterium gilvum] Length = 163 Score = 190 bits (482), Expect = 6e-47 Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 1/160 (0%) Query: 11 SGTQSESTVGAKLPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFE 70 SG ++ + +K PGGQM D N + ++VEL VAA LENL++LRTLV AIGTFE Sbjct: 3 SGDKAWGNLASKFPGGQMADVASHSNGQRLSPQSVELRVAAALENLAVLRTLVAAIGTFE 62 Query: 71 DLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGS 130 DLDFDAVADLRLAVDE CTRLIRSA PD+TL +VVDP+ D LVV AS C + D++APGS Sbjct: 63 DLDFDAVADLRLAVDEACTRLIRSALPDSTLLVVVDPQPDALVVHASTTCDSTDILAPGS 122 Query: 131 FSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLTARRVAS 170 FSWHVL+SL D+V TF DG+ + G VFGI +T RR +S Sbjct: 123 FSWHVLSSLTDEVTTFSDGQAAD-DGEVFGISMTTRRASS 161 >tr|A3PW34|A3PW34_MYCSJ Tax_Id=164757 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Mycobacterium sp.] Length = 179 Score = 183 bits (465), Expect = 5e-45 Identities = 93/150 (62%), Positives = 114/150 (76%), Gaps = 1/150 (0%) Query: 23 LPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRL 82 LPGGQM + + + N + R+VEL VAA LENL++LRTLV A+GTFEDLDFDAV+DLRL Sbjct: 31 LPGGQMAEVENQRNGQANADRSVELRVAATLENLAVLRTLVAAVGTFEDLDFDAVSDLRL 90 Query: 83 AVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADD 142 AVDE CTRLIRSA P +TL +VV P D E+VV AS C D++APGSFSWHVL+SL D+ Sbjct: 91 AVDEACTRLIRSAVPHSTLVVVVHPNDSEVVVDASTTCQNTDILAPGSFSWHVLSSLTDE 150 Query: 143 VQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 V+TF +G+ P G VFGI +T RR +S R Sbjct: 151 VRTFSNGQAP-GDGQVFGISMTTRRASSLR 179 >tr|Q1BCJ2|Q1BCJ2_MYCSS Tax_Id=164756 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Mycobacterium sp.] Length = 179 Score = 183 bits (464), Expect = 7e-45 Identities = 93/150 (62%), Positives = 113/150 (75%), Gaps = 1/150 (0%) Query: 23 LPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRL 82 LPGGQM + + + N + R+VEL VAA LENL++LRTLV A+GTFEDLDFDAV+DLRL Sbjct: 31 LPGGQMAEVENQRNGQANADRSVELRVAATLENLAVLRTLVAAVGTFEDLDFDAVSDLRL 90 Query: 83 AVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADD 142 AVDE CTRLIRSA P +TL +VV P D E+VV AS C D++APGSFSWHVL+SL D+ Sbjct: 91 AVDEACTRLIRSAVPHSTLVVVVHPNDSEVVVDASTTCQNTDILAPGSFSWHVLSSLTDE 150 Query: 143 VQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 V+TF +G P G VFGI +T RR +S R Sbjct: 151 VRTFSNGHAP-GDGQVFGISMTTRRASSLR 179 >tr|A1UCF1|A1UCF1_MYCSK Tax_Id=189918 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Mycobacterium sp.] Length = 179 Score = 183 bits (464), Expect = 7e-45 Identities = 93/150 (62%), Positives = 113/150 (75%), Gaps = 1/150 (0%) Query: 23 LPGGQMTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRL 82 LPGGQM + + + N + R+VEL VAA LENL++LRTLV A+GTFEDLDFDAV+DLRL Sbjct: 31 LPGGQMAEVENQRNGQANADRSVELRVAATLENLAVLRTLVAAVGTFEDLDFDAVSDLRL 90 Query: 83 AVDEVCTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADD 142 AVDE CTRLIRSA P +TL +VV P D E+VV AS C D++APGSFSWHVL+SL D+ Sbjct: 91 AVDEACTRLIRSAVPHSTLVVVVHPNDSEVVVDASTTCQNTDILAPGSFSWHVLSSLTDE 150 Query: 143 VQTFHDGRPPEAAGSVFGIMLTARRVASGR 172 V+TF +G P G VFGI +T RR +S R Sbjct: 151 VRTFSNGHAP-GDGQVFGISMTTRRASSLR 179 >tr|A0QTD7|A0QTD7_MYCS2 Tax_Id=246196 SubName: Full=RsbW protein;[Mycobacterium smegmatis] Length = 138 Score = 162 bits (411), Expect = 1e-38 Identities = 84/130 (64%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Query: 40 RGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDA 99 RG R+VE+ VAA LENL+++RT+V AI TFEDLDFD VADLRLAVDE CT LIRSA PDA Sbjct: 7 RGERSVEIRVAAMLENLAVVRTVVAAIATFEDLDFDVVADLRLAVDEACTTLIRSAVPDA 66 Query: 100 TLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVF 159 TL L VDP D +V+ S C +VV PGSFSWHVL+SL D+V TF DG PE G VF Sbjct: 67 TLVLRVDPGPDAVVISTSTVCIGDNVVEPGSFSWHVLSSLTDEVNTFTDGSGPE-EGQVF 125 Query: 160 GIMLTARRVA 169 GI +T RR + Sbjct: 126 GITMTTRRAS 135 >tr|Q8GR89|Q8GR89_MYCSM Tax_Id=1772 (usfX)SubName: Full=Putative uncharacterized protein usfX;[Mycobacterium smegmatis] Length = 138 Score = 162 bits (411), Expect = 1e-38 Identities = 84/130 (64%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Query: 40 RGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDA 99 RG R+VE+ VAA LENL+++RT+V AI TFEDLDFD VADLRLAVDE CT LIRSA PDA Sbjct: 7 RGERSVEIRVAAMLENLAVVRTVVAAIATFEDLDFDVVADLRLAVDEACTTLIRSAVPDA 66 Query: 100 TLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVF 159 TL L VDP D +V+ S C +VV PGSFSWHVL+SL D+V TF DG PE G VF Sbjct: 67 TLVLRVDPGPDAVVISTSTVCIGDNVVEPGSFSWHVLSSLTDEVNTFTDGSGPE-EGQVF 125 Query: 160 GIMLTARRVA 169 GI +T RR + Sbjct: 126 GITMTTRRAS 135 >tr|B1MBH3|B1MBH3_MYCA9 Tax_Id=561007 SubName: Full=Anti-sigma factor RsbW;[Mycobacterium abscessus] Length = 151 Score = 125 bits (313), Expect = 2e-27 Identities = 70/151 (46%), Positives = 93/151 (61%), Gaps = 7/151 (4%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 MT+A + R++ ++AARLENL+M+RT+V A T +DLD D VADL+LA DE Sbjct: 1 MTEAHTTHSGSHPDDRSLRFDMAARLENLAMMRTVVAAAATVDDLDMDMVADLKLATDEA 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 CTRL+RS+ P+A L + +D D LV+ + C DV SFSWHVL+SLAD V+TF Sbjct: 61 CTRLVRSSVPNAMLVVRLDFHLDRLVMAVYSHCQPGDVFPLDSFSWHVLSSLADHVETFE 120 Query: 148 DGRPPEAAGSVFGIMLT-------ARRVASG 171 P + G + GI LT A RVA+G Sbjct: 121 RAHPDDPVGHIVGISLTKLRDTGSAVRVANG 151 >tr|Q49667|Q49667_MYCLE Tax_Id=1769 SubName: Full=B1308_F3_89;[Mycobacterium leprae] Length = 75 Score = 100 bits (248), Expect = 8e-20 Identities = 52/72 (72%), Positives = 59/72 (81%) Query: 58 MLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLVVDPRDDELVVQAS 117 +L+ LVG IGTFEDLDF AVA+L LAVDE RL+RSAT D+TL LVVD RDDELVV+AS Sbjct: 2 LLQILVGVIGTFEDLDFGAVANLLLAVDEAYIRLVRSATSDSTLVLVVDSRDDELVVEAS 61 Query: 118 AACGTHDVVAPG 129 A C T+DVVA G Sbjct: 62 AICDTYDVVAVG 73 >tr|Q0SEW2|Q0SEW2_RHOSR Tax_Id=101510 SubName: Full=Possible anti-sigma factor;[Rhodococcus sp.] Length = 144 Score = 91.7 bits (226), Expect = 3e-17 Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 3/134 (2%) Query: 38 RERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATP 97 ++ H VEL V A + LS+LR L + ED D D++AD++LA+DE+CT+LI ATP Sbjct: 11 QDHTHPVVELRVRATPDQLSVLRALAATVAIHEDFDLDSIADIKLAMDEICTQLIVRATP 70 Query: 98 DATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGS 157 DA L + D+ L V S+ + D + SF+WHVL +L D V + P++A + Sbjct: 71 DAVLVCRLQYLDNTLRVDVSSTTTSVDSLGERSFAWHVLNALTDSVDLKQE---PDSASA 127 Query: 158 VFGIMLTARRVASG 171 F + +V +G Sbjct: 128 GFVTTMEFTKVKNG 141 >tr|A0QTC0|A0QTC0_MYCS2 Tax_Id=246196 SubName: Full=RsbW protein;[Mycobacterium smegmatis] Length = 194 Score = 89.4 bits (220), Expect = 1e-16 Identities = 61/146 (41%), Positives = 74/146 (50%), Gaps = 19/146 (13%) Query: 41 GHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDAT 100 G R V + V AR L+ LR ++GAI TFE LD D VADL LAVDE C LI +A PD+ Sbjct: 38 GRRRVVVEVPAREAMLAPLRNILGAIATFEGLDSDVVADLCLAVDEACAVLINAAAPDSL 97 Query: 101 LTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTF-------------- 146 ++L + LVV AS C + G FS VL++L D+V TF Sbjct: 98 VSLDIVADAQMLVVDASTTCSRPEDAGLGRFSERVLSALTDEVGTFAAAADTANGTEDDP 157 Query: 147 --HDGRPPEAA---GSVFGIMLTARR 167 G PE VFGI LT RR Sbjct: 158 GNSPGNDPENGTDPRGVFGISLTTRR 183 >tr|C1B083|C1B083_RHOOB Tax_Id=632772 SubName: Full=Putative anti-sigma factor;[Rhodococcus opacus] Length = 144 Score = 88.6 bits (218), Expect = 2e-16 Identities = 47/117 (40%), Positives = 66/117 (56%) Query: 38 RERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATP 97 ++ H VEL V A + LS+LR L + ED D D++AD++LA+DE+CT+LI ATP Sbjct: 11 QDHTHPVVELRVRATPDQLSVLRALAATVAIHEDFDLDSIADIKLAMDEICTQLIVRATP 70 Query: 98 DATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEA 154 DA L + D L V S+ + D + SF+WHVL +L D V + P A Sbjct: 71 DALLVCRLQFLDGTLRVDVSSTTTSVDSLGERSFAWHVLNALTDSVDLRQEPDPATA 127 >tr|C7MSF4|C7MSF4_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 172 Score = 79.7 bits (195), Expect = 1e-13 Identities = 43/125 (34%), Positives = 68/125 (54%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 +EL + A L +L ++R++ +I D D D++ADLRLAVDE C+ LI A PD+T+T Sbjct: 46 IELRLGASLVHLPIIRSVAASIAMRADFDLDSIADLRLAVDEACSTLITRALPDSTMTCR 105 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIMLT 164 +D+L+ + + + + SF W VLT+LAD + + P + I L Sbjct: 106 FTIDEDQLLFRGTVLSTETEAPSTTSFGWRVLTTLADAASAWTEQHPENGQRNWIHIELA 165 Query: 165 ARRVA 169 R+ A Sbjct: 166 KRKPA 170 >tr|C3JIJ7|C3JIJ7_RHOER Tax_Id=596309 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis SK121] Length = 143 Score = 77.8 bits (190), Expect = 4e-13 Identities = 39/99 (39%), Positives = 56/99 (56%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VEL + A L+ LS+LR L + E+ D DA+AD++LA+DE+CT LI A PD+ L Sbjct: 18 VELRIQATLDQLSILRALAATVAIQENFDLDAIADIKLAMDEICTHLIVRAAPDSVLVCR 77 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDV 143 +L V S ++ + SF WH+LT L D + Sbjct: 78 FVFTPPQLHVSVSTTTTEYEDSSQRSFGWHILTELTDSI 116 >tr|C0ZUP2|C0ZUP2_RHOE4 Tax_Id=234621 SubName: Full=Anti-sigma factor;[Rhodococcus erythropolis] Length = 173 Score = 77.4 bits (189), Expect = 5e-13 Identities = 39/99 (39%), Positives = 55/99 (55%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VEL + A L+ LS+LR L + E+ D DA+AD++LA+DE+CT LI A PD+ L Sbjct: 48 VELRIQATLDQLSILRALAATVAIQENFDLDAIADIKLAMDEICTHLIVRAAPDSVLVCR 107 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDV 143 +L V S ++ SF WH+LT L D + Sbjct: 108 FVFTPPQLHVSVSTTTTEYEDSTQRSFGWHILTELTDSI 146 >tr|A4FHE0|A4FHE0_SACEN Tax_Id=405948 (rsbW)SubName: Full=Anti-sigma factor;[Saccharopolyspora erythraea] Length = 139 Score = 75.9 bits (185), Expect = 2e-12 Identities = 42/105 (40%), Positives = 56/105 (53%) Query: 44 AVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTL 103 AVE+ VAA+ L+++R + G + D D DA+AD+RLAVDE C LI A P LT Sbjct: 13 AVEIRVAAQPGPLAVMRAVAGDLAIRADFDVDAIADVRLAVDEACATLIALAMPGTWLTC 72 Query: 104 VVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHD 148 D LV A +F W VLT+LAD++ + HD Sbjct: 73 RFRTEHDRLVFTAEVVSEHAAAPRTDTFGWRVLTALADEISSAHD 117 >tr|Q5YTN9|Q5YTN9_NOCFA Tax_Id=37329 SubName: Full=Putative anti-sigma factor;[Nocardia farcinica] Length = 140 Score = 75.1 bits (183), Expect = 3e-12 Identities = 42/112 (37%), Positives = 59/112 (52%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ VAA + L ++R L + D D VAD+RLAVDEVC+ LI A P ++L Sbjct: 15 VEIRVAASVTQLPIVRGLAETLVLLSDFTLDEVADIRLAVDEVCSTLIAVAAPGSSLDCW 74 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAG 156 + EL+V+ + GT + SF WHVL +L D V+ D +G Sbjct: 75 FSIGERELLVRVTGLAGTEGLPDQHSFGWHVLRTLTDSVKATQDSYDSALSG 126 >tr|A4FLE6|A4FLE6_SACEN Tax_Id=405948 (rsbW)SubName: Full=Anti-sigma factor;[Saccharopolyspora erythraea] Length = 146 Score = 73.2 bits (178), Expect = 1e-11 Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 4/127 (3%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ VAA L+++R ++G + D D D++ADLRLAVDE C+ L+R A P A+L Sbjct: 20 VEVRVAAEPAQLAVMRAVIGDLAMRADFDVDSIADLRLAVDEACSSLVRLAAPSASLVCR 79 Query: 105 VDPRDDELVVQASAACGTHDVVAP--GSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIM 162 + L V A + D P +FSW VL++LAD V T + I Sbjct: 80 FHIHEGGLSVTAEVI--SDDAFGPRKDTFSWRVLSALADSVSTSVQSDAGSDGSHLVRIE 137 Query: 163 LTARRVA 169 LT R A Sbjct: 138 LTKGRTA 144 >tr|Q75NJ1|Q75NJ1_SACER Tax_Id=1836 (prsH)SubName: Full=Putative regulator of SigH;[Saccharopolyspora erythraea] Length = 146 Score = 73.2 bits (178), Expect = 1e-11 Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 4/127 (3%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ VAA L+++R ++G + D D D++ADLRLAVDE C+ L+R A P A+L Sbjct: 20 VEVRVAAEPAQLAVMRAVIGDLAMRADFDVDSIADLRLAVDEACSSLVRLAAPSASLVCR 79 Query: 105 VDPRDDELVVQASAACGTHDVVAP--GSFSWHVLTSLADDVQTFHDGRPPEAAGSVFGIM 162 + L V A + D P +FSW VL++LAD V T + I Sbjct: 80 FHIHEGGLSVTAEVI--SDDAFGPRKDTFSWRVLSALADSVSTSVQSDAGSDGSHLVRIE 137 Query: 163 LTARRVA 169 LT R A Sbjct: 138 LTKGRTA 144 >tr|Q5YW84|Q5YW84_NOCFA Tax_Id=37329 SubName: Full=Putative anti-sigma factor;[Nocardia farcinica] Length = 147 Score = 68.2 bits (165), Expect = 3e-10 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 3/120 (2%) Query: 34 RINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIR 93 RI + G ++ + V AR + L+MLR L + D D V D+RLA+DEV T L+ Sbjct: 8 RIGRSSTGTTSIGIRVPARPDQLTMLRALAETVALIADFAIDEVTDIRLALDEVATALVL 67 Query: 94 SATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADD---VQTFHDGR 150 A P++ L D + V+ + VV+ F WH++ +L + VQ +DGR Sbjct: 68 DAAPESILECEFSYAADCMHVRVRGVALSDAVVSQAGFGWHIVRALTESIAAVQEPYDGR 127 >tr|Q0SKK1|Q0SKK1_RHOSR Tax_Id=101510 SubName: Full=Anti-sigma factor, possible RsbW;[Rhodococcus sp.] Length = 143 Score = 67.8 bits (164), Expect = 4e-10 Identities = 48/131 (36%), Positives = 60/131 (45%), Gaps = 3/131 (2%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M + D R R VEL VAA E L ++R + + D D VAD++LAVDEV Sbjct: 1 MAEVDEVRRMRTRSGVPVELRVAAEFEQLPVVRAVAETLAVLGDFTLDDVADIKLAVDEV 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 C+ LI +A A LT + L V SA V SF WHVL +L + V Sbjct: 61 CSELIAAAPGSAELTCSFVVTEPGLHVTISAPLTRGGVPNRESFGWHVLETLMNAVSV-- 118 Query: 148 DGRPPEAAGSV 158 P GSV Sbjct: 119 -SEGPVGNGSV 128 >tr|C7MYT1|C7MYT1_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 127 Score = 67.4 bits (163), Expect = 6e-10 Identities = 37/105 (35%), Positives = 52/105 (49%) Query: 43 RAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLT 102 R VE+ V A E + ++R + + DL D +ADLRLAVDE C L+ A TL Sbjct: 4 RTVEITVDAEPELVPVVRNVAADLAIRTDLQLDTIADLRLAVDEACGLLLARAAKPTTLR 63 Query: 103 LVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFH 147 D + + AC + F+WHVLT+L V++FH Sbjct: 64 TRFTISDGTITARTQVACREGTSLPQEGFNWHVLTALVRAVRSFH 108 >tr|C1ASL5|C1ASL5_RHOOB Tax_Id=632772 SubName: Full=Putative anti-sigma factor;[Rhodococcus opacus] Length = 143 Score = 65.1 bits (157), Expect = 3e-09 Identities = 43/114 (37%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VEL VAA E L ++R + + D D VAD++LAVDEVC+ LI + A LT Sbjct: 18 VELRVAAEFEQLPVVRAVAETLAVLGDFTLDDVADIKLAVDEVCSELIAATPGSAELTCS 77 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAGSV 158 + L V SA V SF WHVL +L + V P GSV Sbjct: 78 FAVTETGLHVTISAPLSRRGVPNRESFGWHVLETLMNAVSV---SEGPVGNGSV 128 >tr|C6W9Z2|C6W9Z2_ACTMD Tax_Id=446462 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Actinosynnema mirum] Length = 145 Score = 65.1 bits (157), Expect = 3e-09 Identities = 38/119 (31%), Positives = 58/119 (48%) Query: 28 MTDADPRINKRERGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEV 87 M+ +P + + VEL +AA LS++R + I +D D D++ DL+LAVDE Sbjct: 1 MSHTEPHSGELDNALSGVELRIAADPTQLSVVRAVAADIAMRQDFDLDSIEDLKLAVDEA 60 Query: 88 CTRLIRSATPDATLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTF 146 C+ LI A+ A L+ D ++ V SF W VL++L D V T+ Sbjct: 61 CSTLISLASKGAVLSARFVVADGDVQVSTQVVSERAAPPDRDSFGWRVLSALVDSVTTW 119 >tr|A3RDW0|A3RDW0_RHOOP Tax_Id=37919 SubName: Full=Putative anti-sigma factor; Flags: Fragment;[Rhodococcus opacus] Length = 142 Score = 64.7 bits (156), Expect = 4e-09 Identities = 40/99 (40%), Positives = 51/99 (51%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VEL VAA E L ++R + + D D VAD++LAVDEVC+ LI +A A LT Sbjct: 17 VELRVAAEFEQLPVVRAVAETLAVLGDFTLDDVADIKLAVDEVCSELIAAAPGSAELTCS 76 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDV 143 + L V SA V SF WHVL +L + V Sbjct: 77 FAVTETGLHVTISAPLTRGGVPNRESFGWHVLETLMNAV 115 >tr|Q5Z3J3|Q5Z3J3_NOCFA Tax_Id=37329 SubName: Full=Putative anti-sigma factor;[Nocardia farcinica] Length = 145 Score = 64.3 bits (155), Expect = 5e-09 Identities = 37/112 (33%), Positives = 53/112 (47%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 + + V A E L MLR L + D D VAD+RLA+DEV T L++ A P + L Sbjct: 18 IGVRVPAVYEQLIMLRALAETVALIADFGIDEVADIRLALDEVATALLQDAVPGSELDCA 77 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAG 156 + + + SA + SF WH++++L D V T R A G Sbjct: 78 FSYDETTMDITVSAVTVSETGPDQRSFGWHIVSTLTDSVSTSTGPRDATAGG 129 >tr|C9ZAC0|C9ZAC0_STRSW Tax_Id=680198 (prs)SubName: Full=Anti-sigma factor;[Streptomyces scabies] Length = 141 Score = 62.0 bits (149), Expect = 2e-08 Identities = 37/101 (36%), Positives = 52/101 (51%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 18 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 77 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQT 145 DD L V SA A +F+W VL++LA V + Sbjct: 78 FRLVDDSLEVTVSAPTTDGHAPARDTFAWTVLSALAGKVSS 118 >tr|C7QCR8|C7QCR8_CATAD Tax_Id=479433 SubName: Full=Putative anti-sigma regulatory factor, serine/threonine protein kinase;[Catenulispora acidiphila] Length = 145 Score = 61.6 bits (148), Expect = 3e-08 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 4/112 (3%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L+ A P + LT Sbjct: 12 VEVRIPAEGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLTKAVPGSGLTCR 71 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHDGRPPEAAG 156 + RD L V S A +F+W VL +LA V D R +A G Sbjct: 72 FELRDGALAVDVSVPTLDGKTPARDTFAWTVLAALAGQV----DARVSDADG 119 >tr|Q7AKF8|Q7AKF8_STRCO Tax_Id=1902 SubName: Full=Anti-sigma factor;[Streptomyces coelicolor] Length = 137 Score = 61.2 bits (147), Expect = 4e-08 Identities = 37/104 (35%), Positives = 53/104 (50%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHD 148 DD L V SA + +F+W VL++LA V + D Sbjct: 74 FRLVDDSLEVTVSAPTTDGHAPSRDTFAWTVLSALAGKVSSAVD 117 >tr|Q9R3X8|Q9R3X8_STRCO Tax_Id=100226 (prsH)SubName: Full=PrsH protein; SubName: Full=Putative sigma factor SigH anti-sigma factor;[Streptomyces coelicolor A] Length = 137 Score = 61.2 bits (147), Expect = 4e-08 Identities = 37/104 (35%), Positives = 53/104 (50%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHD 148 DD L V SA + +F+W VL++LA V + D Sbjct: 74 FRLVDDSLEVTVSAPTTDGHAPSRDTFAWTVLSALAGKVSSAVD 117 >tr|B5HN08|B5HN08_9ACTO Tax_Id=463191 SubName: Full=Anti-sigma factor;[Streptomyces sviceus ATCC 29083] Length = 137 Score = 61.2 bits (147), Expect = 4e-08 Identities = 37/104 (35%), Positives = 53/104 (50%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTFHD 148 DD L V SA + +F+W VL++LA V + D Sbjct: 74 FRLVDDSLEVTVSAPTTDGHAPSRDTFAWTVLSALAGKVSSAVD 117 >tr|Q82IX0|Q82IX0_STRAW Tax_Id=33903 (rsbW1)SubName: Full=Putative anti-sigma factor;[Streptomyces avermitilis] Length = 137 Score = 60.8 bits (146), Expect = 5e-08 Identities = 36/101 (35%), Positives = 52/101 (51%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQT 145 DD L V SA + +F+W VL++LA V + Sbjct: 74 FRLVDDSLEVTVSAPTTDGHAPSRDTFAWTVLSALAGKVSS 114 >tr|B4V971|B4V971_9ACTO Tax_Id=465541 SubName: Full=Anti-sigma factor;[Streptomyces sp. Mg1] Length = 137 Score = 60.5 bits (145), Expect = 7e-08 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 4/102 (3%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAP--GSFSWHVLTSLADDVQ 144 DD L V SA T D AP +F+W VL++LA V+ Sbjct: 74 FRLVDDSLEVTVSAP--TTDGRAPERDTFAWTVLSALAGKVE 113 >tr|C7MZS4|C7MZS4_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 147 Score = 60.1 bits (144), Expect = 9e-08 Identities = 37/107 (34%), Positives = 52/107 (48%) Query: 40 RGHRAVELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDA 99 R H VEL V A +L +R + + E D D V DL LAVDE C LIR++ P A Sbjct: 13 RCHGPVELRVPAVARHLVTVRMITQNVAENEGFDPDEVTDLVLAVDEACASLIRASVPGA 72 Query: 100 TLTLVVDPRDDELVVQASAACGTHDVVAPGSFSWHVLTSLADDVQTF 146 LT + L +AS T + + SF W +L ++ D + + Sbjct: 73 LLTCRLSIAFGALRAEASTTTVTDGIPSQQSFGWRMLGTVTDSLSAW 119 >tr|B5HB88|B5HB88_STRPR Tax_Id=457429 SubName: Full=Anti-sigma factor;[Streptomyces pristinaespiralis ATCC 25486] Length = 137 Score = 60.1 bits (144), Expect = 9e-08 Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 4/103 (3%) Query: 45 VELNVAARLENLSMLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSATPDATLTLV 104 VE+ + A LS+LRT + D D + DLR+AVDE C L++ A P + L+ V Sbjct: 14 VEVRLPAAGAYLSVLRTATAGLAARLDFTLDEIEDLRIAVDEACAILLQQAVPGSVLSCV 73 Query: 105 VDPRDDELVVQASAACGTHDVVAP--GSFSWHVLTSLADDVQT 145 DD L V SA T D AP +F+W VL++LA V + Sbjct: 74 FRLVDDSLEVTVSAP--TTDGRAPERDTFAWTVLSALAGKVDS 114 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,224,676,320 Number of extensions: 43747408 Number of successful extensions: 102285 Number of sequences better than 10.0: 128 Number of HSP's gapped: 103269 Number of HSP's successfully gapped: 128 Length of query: 172 Length of database: 3,846,993,858 Length adjustment: 127 Effective length of query: 45 Effective length of database: 2,415,043,077 Effective search space: 108676938465 Effective search space used: 108676938465 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 75 (33.5 bits)