BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1340 (143 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HEU2|B2HEU2_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 144 2e-33 tr|A0PRB3|A0PRB3_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 140 3e-32 tr|Q7TWZ5|Q7TWZ5_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER... 97 4e-19 tr|O05849|O05849_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSER... 97 4e-19 tr|C6DXG0|C6DXG0_MYCTK Tax_Id=478434 SubName: Full=Conserved mem... 97 4e-19 tr|C1AGY8|C1AGY8_MYCBT Tax_Id=561275 SubName: Full=Putative inte... 97 4e-19 tr|A5U7N9|A5U7N9_MYCTA Tax_Id=419947 SubName: Full=Putative cons... 97 4e-19 tr|A1KNL7|A1KNL7_MYCBP Tax_Id=410289 SubName: Full=Probable cons... 97 4e-19 tr|A5WSC9|A5WSC9_MYCTF Tax_Id=336982 SubName: Full=Conserved int... 97 4e-19 tr|A4KLB6|A4KLB6_MYCTU Tax_Id=395095 SubName: Full=Conserved int... 97 4e-19 tr|A2VP15|A2VP15_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 97 4e-19 tr|Q73UP8|Q73UP8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 93 8e-18 tr|A0QK74|A0QK74_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 93 8e-18 tr|Q9CCH6|Q9CCH6_MYCLE Tax_Id=1769 SubName: Full=Putative membra... 91 5e-17 tr|B8ZQG9|B8ZQG9_MYCLB Tax_Id=561304 SubName: Full=Putative memb... 91 5e-17 tr|Q1BC87|Q1BC87_MYCSS Tax_Id=164756 SubName: Full=Putative cons... 78 4e-13 tr|A3PWE4|A3PWE4_MYCSJ Tax_Id=164757 SubName: Full=Putative cons... 78 4e-13 tr|A1UCQ7|A1UCQ7_MYCSK Tax_Id=189918 SubName: Full=Putative cons... 78 4e-13 tr|B1MF07|B1MF07_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 74 4e-12 tr|Q0S2W2|Q0S2W2_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 69 2e-10 tr|C1B1G0|C1B1G0_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ... 69 2e-10 tr|A0QTQ1|A0QTQ1_MYCS2 Tax_Id=246196 SubName: Full=Membrane prot... 65 2e-09 tr|Q5YQW2|Q5YQW2_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 62 3e-08 tr|C0ZX15|C0ZX15_RHOE4 Tax_Id=234621 SubName: Full=Conserved hyp... 61 5e-08 tr|C3JG34|C3JG34_RHOER Tax_Id=596309 SubName: Full=Putative unch... 61 5e-08 tr|D0LF16|D0LF16_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 59 2e-07 tr|C4LK60|C4LK60_CORK4 Tax_Id=645127 SubName: Full=Putative memb... 49 1e-04 tr|A4TFD0|A4TFD0_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 49 2e-04 tr|A1T607|A1T607_MYCVP Tax_Id=350058 SubName: Full=Putative cons... 47 9e-04 tr|B1VFB8|B1VFB8_CORU7 Tax_Id=504474 SubName: Full=Putative unch... 42 0.017 tr|Q6NIQ3|Q6NIQ3_CORDI Tax_Id=1717 SubName: Full=Putative membra... 38 0.42 tr|C6WJ15|C6WJ15_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 37 0.54 tr|B5GD35|B5GD35_9ACTO Tax_Id=465543 SubName: Full=Integral memb... 37 0.71 tr|B4V969|B4V969_9ACTO Tax_Id=465541 SubName: Full=Integral memb... 37 0.71 tr|Q8FRH7|Q8FRH7_COREF Tax_Id=152794 SubName: Full=Putative unch... 37 0.93 tr|C8NLR8|C8NLR8_COREF Tax_Id=196164 SubName: Full=Membrane prot... 37 0.93 tr|Q8NSB0|Q8NSB0_CORGL Tax_Id=1718 SubName: Full=Hypothetical me... 35 2.1 tr|A4QCA4|A4QCA4_CORGB Tax_Id=340322 SubName: Full=Putative unch... 35 2.1 tr|C9NDP7|C9NDP7_9ACTO Tax_Id=591167 SubName: Full=Putative inte... 35 3.5 tr|A4FNG9|A4FNG9_SACEN Tax_Id=405948 SubName: Full=Probable cons... 34 4.6 tr|B1W176|B1W176_STRGG Tax_Id=455632 SubName: Full=Putative inte... 34 6.0 tr|C0E151|C0E151_9CORY Tax_Id=566549 SubName: Full=Putative unch... 33 7.8 >tr|B2HEU2|B2HEU2_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 143 Score = 144 bits (364), Expect = 2e-33 Identities = 79/143 (55%), Positives = 80/143 (55%) Query: 1 VTVPAPTPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRLVNGLGTAVWFXXXXXXXX 60 +TVPAPTPIR DQRLVNGLGTAVWF Sbjct: 1 MTVPAPTPIRGAGVVVAVQGAAGLIVAAVLAVRGLAGADQRLVNGLGTAVWFVLIGAAVL 60 Query: 61 XXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPXXXXXXXXXXXXXXXXX 120 RRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIP Sbjct: 61 AAGCALVAGRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPLGAVALTVLLLLFSPPS 120 Query: 121 XRWAGAGDQRGPASATKSGPDSR 143 RWAGAGDQRGPASATKSGPDSR Sbjct: 121 LRWAGAGDQRGPASATKSGPDSR 143 >tr|A0PRB3|A0PRB3_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 143 Score = 140 bits (354), Expect = 3e-32 Identities = 77/143 (53%), Positives = 78/143 (54%) Query: 1 VTVPAPTPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRLVNGLGTAVWFXXXXXXXX 60 +TVPAPTPIR DQR VNGLGTAVWF Sbjct: 1 MTVPAPTPIRGAGVVVAVQGTAGLIVAAVLAVRGLAGADQRQVNGLGTAVWFVLIGAAVL 60 Query: 61 XXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPXXXXXXXXXXXXXXXXX 120 RRWGRGLAVVTQLLLLPVAWYLT DSHQPVFGIP Sbjct: 61 AAGCALVAGRRWGRGLAVVTQLLLLPVAWYLTTDSHQPVFGIPLGAVALTVLLLLFSPPS 120 Query: 121 XRWAGAGDQRGPASATKSGPDSR 143 RWAGAGDQRGPASATKSGPDSR Sbjct: 121 LRWAGAGDQRGPASATKSGPDSR 143 >tr|Q7TWZ5|Q7TWZ5_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN;[Mycobacterium bovis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|O05849|O05849_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN;[Mycobacterium tuberculosis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|C6DXG0|C6DXG0_MYCTK Tax_Id=478434 SubName: Full=Conserved membrane protein;[Mycobacterium tuberculosis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|C1AGY8|C1AGY8_MYCBT Tax_Id=561275 SubName: Full=Putative integral membrane protein;[Mycobacterium bovis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|A5U7N9|A5U7N9_MYCTA Tax_Id=419947 SubName: Full=Putative conserved integral membrane protein;[Mycobacterium tuberculosis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|A1KNL7|A1KNL7_MYCBP Tax_Id=410289 SubName: Full=Probable conserved integral membrane protein;[Mycobacterium bovis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|A5WSC9|A5WSC9_MYCTF Tax_Id=336982 SubName: Full=Conserved integral membrane protein;[Mycobacterium tuberculosis] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|A4KLB6|A4KLB6_MYCTU Tax_Id=395095 SubName: Full=Conserved integral membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 135 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 31 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 90 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 91 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 135 >tr|A2VP15|A2VP15_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 143 Score = 97.4 bits (241), Expect = 4e-19 Identities = 51/105 (48%), Positives = 53/105 (50%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGLGTA WF + WGRGLAV QLLLLPVAWYL SHQP Sbjct: 39 DQHIVNGLGTAGWFVLVGGAVLAAGCRLAVGKLWGRGLAVFAQLLLLPVAWYLIVGSHQP 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 GIP RWA DQRG ASA GPDSR Sbjct: 99 AIGIPVGIIALGVLVLLFSPPSIRWAAGRDQRGAASAANRGPDSR 143 >tr|Q73UP8|Q73UP8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 163 Score = 93.2 bits (230), Expect = 8e-18 Identities = 51/105 (48%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGL TA WF +RWGRGLAV+TQLLLLPVAWYL SHQP Sbjct: 60 DQHVVNGLATAGWFVLVGAAVIGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQP 119 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 FGIP RWA AG Q AS+ GPDSR Sbjct: 120 GFGIPAGAVALVVLGLLFSPAAVRWA-AGGQDDSASSANRGPDSR 163 >tr|A0QK74|A0QK74_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 143 Score = 93.2 bits (230), Expect = 8e-18 Identities = 51/105 (48%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNGL TA WF +RWGRGLAV+TQLLLLPVAWYL SHQP Sbjct: 40 DQHVVNGLATAGWFVLVGAAVIGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQP 99 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 FGIP RWA AG Q AS+ GPDSR Sbjct: 100 GFGIPAGAVALVVLGLLFSPAAVRWA-AGGQDDSASSANRGPDSR 143 >tr|Q9CCH6|Q9CCH6_MYCLE Tax_Id=1769 SubName: Full=Putative membrane protein;[Mycobacterium leprae] Length = 173 Score = 90.5 bits (223), Expect = 5e-17 Identities = 47/105 (44%), Positives = 52/105 (49%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQR+VNGLGTA+WF +RWGRGLAV TQLLLLPVAWYL SHQ Sbjct: 69 DQRIVNGLGTAIWFVVVGVAVLAAGCALLVGKRWGRGLAVFTQLLLLPVAWYLVVGSHQS 128 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 FG P RW+ QR AS+ DSR Sbjct: 129 AFGFPMGIVALIALILLFSPPAVRWSAGAYQRSVASSANRKADSR 173 >tr|B8ZQG9|B8ZQG9_MYCLB Tax_Id=561304 SubName: Full=Putative membrane protein;[Mycobacterium leprae] Length = 173 Score = 90.5 bits (223), Expect = 5e-17 Identities = 47/105 (44%), Positives = 52/105 (49%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQR+VNGLGTA+WF +RWGRGLAV TQLLLLPVAWYL SHQ Sbjct: 69 DQRIVNGLGTAIWFVVVGVAVLAAGCALLVGKRWGRGLAVFTQLLLLPVAWYLVVGSHQS 128 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRGPASATKSGPDSR 143 FG P RW+ QR AS+ DSR Sbjct: 129 AFGFPMGIVALIALILLFSPPAVRWSAGAYQRSVASSANRKADSR 173 >tr|Q1BC87|Q1BC87_MYCSS Tax_Id=164756 SubName: Full=Putative conserved integral membrane protein;[Mycobacterium sp.] Length = 140 Score = 77.8 bits (190), Expect = 4e-13 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 3/141 (2%) Query: 3 VPAPTPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRLVNGLGTAVWFXXXXXXXXXX 62 VPAP+ +R ++ +N GTA WF Sbjct: 3 VPAPSTVRQAAVLVALEGATGVVAALVYLVSGFSRAEEAGLNKFGTAAWFAIVGGGVLAA 62 Query: 63 XXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPXXXXXXXXXXXXXXXXXXR 122 RRWGRG+AV QLLLLPV WY+ SHQ +GIP + Sbjct: 63 GWALWTGRRWGRGIAVFAQLLLLPVTWYVAVGSHQWFYGIPVAVVALTALLLLFSPSALQ 122 Query: 123 WAGAGDQRGPASATKSGPDSR 143 W GA D PASA SGPD+R Sbjct: 123 WLGAQD---PASADNSGPDTR 140 >tr|A3PWE4|A3PWE4_MYCSJ Tax_Id=164757 SubName: Full=Putative conserved integral membrane protein;[Mycobacterium sp.] Length = 140 Score = 77.8 bits (190), Expect = 4e-13 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 3/141 (2%) Query: 3 VPAPTPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRLVNGLGTAVWFXXXXXXXXXX 62 VPAP+ +R ++ +N GTA WF Sbjct: 3 VPAPSTVRQAAVLVALEGATGVVAALVYLISGFSRAEEAGLNKFGTAAWFAIVGSGVLAA 62 Query: 63 XXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPXXXXXXXXXXXXXXXXXXR 122 RRWGRG+AV QLLLLPV WY+ SHQ +GIP + Sbjct: 63 GWALWTGRRWGRGIAVFAQLLLLPVTWYVAVGSHQWFYGIPVAVVALTALLLLFSPSALQ 122 Query: 123 WAGAGDQRGPASATKSGPDSR 143 W GA D PASA SGPD+R Sbjct: 123 WLGAQD---PASADNSGPDTR 140 >tr|A1UCQ7|A1UCQ7_MYCSK Tax_Id=189918 SubName: Full=Putative conserved integral membrane protein;[Mycobacterium sp.] Length = 140 Score = 77.8 bits (190), Expect = 4e-13 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 3/141 (2%) Query: 3 VPAPTPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRLVNGLGTAVWFXXXXXXXXXX 62 VPAP+ +R ++ +N GTA WF Sbjct: 3 VPAPSTVRQAAVLVALEGATGVVAALVYLVSGFSRAEEAGLNKFGTAAWFAIVGGGVLAA 62 Query: 63 XXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIPXXXXXXXXXXXXXXXXXXR 122 RRWGRG+AV QLLLLPV WY+ SHQ +GIP + Sbjct: 63 GWALWTGRRWGRGIAVFAQLLLLPVTWYVAVGSHQWFYGIPVAVVALTALLLLFSPSALQ 122 Query: 123 WAGAGDQRGPASATKSGPDSR 143 W GA D PASA SGPD+R Sbjct: 123 WLGAQD---PASADNSGPDTR 140 >tr|B1MF07|B1MF07_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 135 Score = 74.3 bits (181), Expect = 4e-12 Identities = 39/93 (41%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +VNG GTA WF RRWGRG+AV+ QLLLLPVAWY SHQ Sbjct: 39 DQHVVNGYGTAAWFSVFGTAVLAAGLALISGRRWGRGIAVMMQLLLLPVAWYAAVGSHQL 98 Query: 99 VFGIPXXXXXXXXXXXXXXXXXXRWAGAGDQRG 131 G+P WAG GD+ G Sbjct: 99 ALGVPLAIVAVAALVLLFSPTAQMWAG-GDEAG 130 >tr|Q0S2W2|Q0S2W2_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 145 Score = 68.9 bits (167), Expect = 2e-10 Identities = 32/64 (50%), Positives = 37/64 (57%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ + +G GTA WF RRWGR +A+V QLLLLPVAW L DSHQP Sbjct: 44 DQSVSSGYGTAAWFAILGGAVLAAGLALIFGRRWGRAIAIVAQLLLLPVAWSLLTDSHQP 103 Query: 99 VFGI 102 FG+ Sbjct: 104 FFGV 107 >tr|C1B1G0|C1B1G0_RHOOB Tax_Id=632772 SubName: Full=Hypothetical membrane protein;[Rhodococcus opacus] Length = 145 Score = 68.9 bits (167), Expect = 2e-10 Identities = 32/64 (50%), Positives = 37/64 (57%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ + +G GTA WF RRWGR +A+V QLLLLPVAW L DSHQP Sbjct: 44 DQSVSSGYGTAAWFAILGGAVLAAGLALIFGRRWGRAIAIVAQLLLLPVAWSLLTDSHQP 103 Query: 99 VFGI 102 FG+ Sbjct: 104 FFGV 107 >tr|A0QTQ1|A0QTQ1_MYCS2 Tax_Id=246196 SubName: Full=Membrane protein;[Mycobacterium smegmatis] Length = 126 Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ++VNG GTA+WF RRWGRG+AV+ LLLLPVAWY+ SH Sbjct: 38 DQQIVNGWGTALWFILIGGGVLAGGWALITGRRWGRGIAVIANLLLLPVAWYVIT-SHHI 96 Query: 99 VFGI 102 V+G+ Sbjct: 97 VYGV 100 >tr|Q5YQW2|Q5YQW2_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 144 Score = 61.6 bits (148), Expect = 3e-08 Identities = 28/63 (44%), Positives = 34/63 (53%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ +G GTA WF RWGR +AV+ Q+LLLPV W L DSHQP Sbjct: 48 DQSQASGYGTAAWFGILGGAVLAAGVGLLLGHRWGRAIAVIAQVLLLPVVWSLLTDSHQP 107 Query: 99 VFG 101 ++G Sbjct: 108 LWG 110 >tr|C0ZX15|C0ZX15_RHOE4 Tax_Id=234621 SubName: Full=Conserved hypothetical membrane protein;[Rhodococcus erythropolis] Length = 156 Score = 60.8 bits (146), Expect = 5e-08 Identities = 31/64 (48%), Positives = 33/64 (51%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ + NG G A W RRWGR +AVV QLLLLPVAW L DSHQ Sbjct: 44 DQSVTNGYGFAAWVAILGGAVLAAGIALLTGRRWGRAIAVVAQLLLLPVAWSLLTDSHQV 103 Query: 99 VFGI 102 GI Sbjct: 104 PLGI 107 >tr|C3JG34|C3JG34_RHOER Tax_Id=596309 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis SK121] Length = 136 Score = 60.8 bits (146), Expect = 5e-08 Identities = 31/64 (48%), Positives = 33/64 (51%) Query: 39 DQRLVNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQP 98 DQ + NG G A W RRWGR +AVV QLLLLPVAW L DSHQ Sbjct: 24 DQSVTNGYGFAAWVAILGGAVLAAGIALLTGRRWGRAIAVVAQLLLLPVAWSLLTDSHQV 83 Query: 99 VFGI 102 GI Sbjct: 84 PLGI 87 >tr|D0LF16|D0LF16_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 144 Score = 58.5 bits (140), Expect = 2e-07 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 43 VNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGI 102 ++G GTA WF RRWGR +A+V Q+LLLPVA+YL SHQP F + Sbjct: 56 ISGYGTAAWFGIIGGGVLLGGVALLTGRRWGRSIAMVAQILLLPVAYYLFT-SHQPAFAV 114 Query: 103 P 103 P Sbjct: 115 P 115 >tr|C4LK60|C4LK60_CORK4 Tax_Id=645127 SubName: Full=Putative membrane protein;[Corynebacterium kroppenstedtii] Length = 182 Score = 49.3 bits (116), Expect = 1e-04 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 44 NGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGIP 103 NG GTA+WF +RWGR + +LLLPVAWY+ + S +P GIP Sbjct: 97 NGYGTALWFVIIFGAVAAAGWALTRGKRWGRAPVAMLNMLLLPVAWYMLSSS-RPDLGIP 155 >tr|A4TFD0|A4TFD0_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Mycobacterium gilvum] Length = 150 Score = 48.9 bits (115), Expect = 2e-04 Identities = 22/49 (44%), Positives = 27/49 (55%) Query: 43 VNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 ++G GTA WF RRWGRG+AV L+LLPVAWY+ Sbjct: 48 ISGYGTAGWFTIMGSGVAAAGWALWTGRRWGRGIAVFANLVLLPVAWYV 96 >tr|A1T607|A1T607_MYCVP Tax_Id=350058 SubName: Full=Putative conserved integral membrane protein;[Mycobacterium vanbaalenii] Length = 133 Score = 46.6 bits (109), Expect = 9e-04 Identities = 21/49 (42%), Positives = 26/49 (53%) Query: 43 VNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 ++G GTA WF RRWGRG+AV L+LL VAWY+ Sbjct: 35 ISGYGTAAWFAIMGSGVAAAGWALLTGRRWGRGIAVFANLVLLGVAWYV 83 >tr|B1VFB8|B1VFB8_CORU7 Tax_Id=504474 SubName: Full=Putative uncharacterized protein;[Corynebacterium urealyticum] Length = 156 Score = 42.4 bits (98), Expect = 0.017 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 43 VNGLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFGI 102 ++G GTA+WF R WGRG V+ Q+ L+PVA+Y+ S +P + Sbjct: 69 ISGYGTALWFFFIFGAVAVCGYFLYRGRSWGRGPVVMLQICLVPVAYYMFR-SGRPELAV 127 Query: 103 P 103 P Sbjct: 128 P 128 >tr|Q6NIQ3|Q6NIQ3_CORDI Tax_Id=1717 SubName: Full=Putative membrane protein;[Corynebacterium diphtheriae] Length = 153 Score = 37.7 bits (86), Expect = 0.42 Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 G+GTA++F +RWGRG ++ ++LLLP+ +Y+ Sbjct: 71 GVGTAIFFVIVFGTVIAGAIMMMRGKRWGRGPVIMLEILLLPIGFYM 117 >tr|C6WJ15|C6WJ15_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 133 Score = 37.4 bits (85), Expect = 0.54 Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 46 LGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTADSHQPVFG 101 LG A +F + WGR A+V QLLLL VAWY+ S + ++G Sbjct: 46 LGEAAYFAVLCSGVVAVGVGLALGKGWGRTPALVVQLLLLGVAWYMYGPSDRQLWG 101 >tr|B5GD35|B5GD35_9ACTO Tax_Id=465543 SubName: Full=Integral membrane protein;[Streptomyces sp. SPB74] Length = 143 Score = 37.0 bits (84), Expect = 0.71 Identities = 16/22 (72%), Positives = 18/22 (81%) Query: 70 RRWGRGLAVVTQLLLLPVAWYL 91 RRW RG AV+TQL+ LPVAW L Sbjct: 77 RRWSRGPAVITQLMGLPVAWTL 98 >tr|B4V969|B4V969_9ACTO Tax_Id=465541 SubName: Full=Integral membrane protein;[Streptomyces sp. Mg1] Length = 156 Score = 37.0 bits (84), Expect = 0.71 Identities = 15/22 (68%), Positives = 18/22 (81%) Query: 70 RRWGRGLAVVTQLLLLPVAWYL 91 RRW RG A++TQL+ LPVAW L Sbjct: 92 RRWSRGPALITQLMALPVAWTL 113 >tr|Q8FRH7|Q8FRH7_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 140 Score = 36.6 bits (83), Expect = 0.93 Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTAD 94 G GTAV+F RRWGRG ++ ++ PVA+Y+ ++ Sbjct: 58 GFGTAVFFIIIFGTVFAGALSMMSGRRWGRGPIIMLNIIFFPVAYYMFSE 107 >tr|C8NLR8|C8NLR8_COREF Tax_Id=196164 SubName: Full=Membrane protein;[Corynebacterium efficiens YS-314] Length = 133 Score = 36.6 bits (83), Expect = 0.93 Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYLTAD 94 G GTAV+F RRWGRG ++ ++ PVA+Y+ ++ Sbjct: 51 GFGTAVFFIIIFGTVFAGALSMMSGRRWGRGPIIMLNIIFFPVAYYMFSE 100 >tr|Q8NSB0|Q8NSB0_CORGL Tax_Id=1718 SubName: Full=Hypothetical membrane protein; SubName: Full=Membrane protein;[Corynebacterium glutamicum] Length = 140 Score = 35.4 bits (80), Expect = 2.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 G GTA +F RWGRG V+ ++LLP A+Y+ Sbjct: 58 GYGTAAFFIIVFGTVVAGAINMMKGHRWGRGAVVMLNIILLPAAYYM 104 >tr|A4QCA4|A4QCA4_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 140 Score = 35.4 bits (80), Expect = 2.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 G GTA +F RWGRG V+ ++LLP A+Y+ Sbjct: 58 GYGTAAFFIIVFGTVVAGAINMMKGHRWGRGAVVMLNIILLPAAYYM 104 >tr|C9NDP7|C9NDP7_9ACTO Tax_Id=591167 SubName: Full=Putative integral membrane protein;[Streptomyces flavogriseus ATCC 33331] Length = 149 Score = 34.7 bits (78), Expect = 3.5 Identities = 14/22 (63%), Positives = 17/22 (77%) Query: 70 RRWGRGLAVVTQLLLLPVAWYL 91 R W RG A++TQL+ LPVAW L Sbjct: 83 RSWSRGPALITQLMALPVAWTL 104 >tr|A4FNG9|A4FNG9_SACEN Tax_Id=405948 SubName: Full=Probable conserved integral membrane protein;[Saccharopolyspora erythraea] Length = 143 Score = 34.3 bits (77), Expect = 4.6 Identities = 15/32 (46%), Positives = 19/32 (59%) Query: 70 RRWGRGLAVVTQLLLLPVAWYLTADSHQPVFG 101 + W R A++ QLLLL AWY S QP+ G Sbjct: 76 KHWARTPAMLLQLLLLGAAWYAIGPSGQPLIG 107 >tr|B1W176|B1W176_STRGG Tax_Id=455632 SubName: Full=Putative integral membrane protein;[Streptomyces griseus subsp. griseus] Length = 149 Score = 33.9 bits (76), Expect = 6.0 Identities = 13/22 (59%), Positives = 17/22 (77%) Query: 70 RRWGRGLAVVTQLLLLPVAWYL 91 R W RG A++TQ++ LPVAW L Sbjct: 82 RSWSRGPALITQIMALPVAWTL 103 >tr|C0E151|C0E151_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 148 Score = 33.5 bits (75), Expect = 7.8 Identities = 17/47 (36%), Positives = 22/47 (46%) Query: 45 GLGTAVWFXXXXXXXXXXXXXXXXXRRWGRGLAVVTQLLLLPVAWYL 91 G GTAV+F RRWGRG ++ +L LL A Y+ Sbjct: 66 GYGTAVFFIIIFGAVAAGAVMMFTARRWGRGPVIMLELFLLVAATYM 112 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.138 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 631,713,370 Number of extensions: 12928949 Number of successful extensions: 16201 Number of sequences better than 10.0: 42 Number of HSP's gapped: 16178 Number of HSP's successfully gapped: 42 Length of query: 143 Length of database: 3,846,993,858 Length adjustment: 107 Effective length of query: 36 Effective length of database: 2,640,547,137 Effective search space: 95059696932 Effective search space used: 95059696932 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 75 (33.5 bits)