BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1358 (1057 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HEW0|B2HEW0_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent... 1622 0.0 tr|A0PR95|A0PR95_MYCUA Tax_Id=362242 SubName: Full=ATP-dependent... 1607 0.0 tr|Q7TX11|Q7TX11_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE ATP-DE... 1189 0.0 tr|O53348|O53348_MYCTU Tax_Id=1773 SubName: Full=Helicase, UvrD/... 1189 0.0 tr|C6DXE2|C6DXE2_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent... 1189 0.0 tr|C1AGX1|C1AGX1_MYCBT Tax_Id=561275 SubName: Full=Putative ATP-... 1189 0.0 tr|A5U7M2|A5U7M2_MYCTA Tax_Id=419947 SubName: Full=UvrD/Rep fami... 1189 0.0 tr|A1KNK0|A1KNK0_MYCBP Tax_Id=410289 SubName: Full=Possible ATP-... 1189 0.0 tr|A5WSB1|A5WSB1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 1189 0.0 tr|A4KL98|A4KL98_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 1189 0.0 tr|A2VNZ9|A2VNZ9_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 1189 0.0 tr|Q73UR5|Q73UR5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 1165 0.0 tr|A0QK58|A0QK58_MYCA1 Tax_Id=243243 SubName: Full=Helicase, Uvr... 1162 0.0 tr|Q1BC69|Q1BC69_MYCSS Tax_Id=164756 SubName: Full=UvrD/REP heli... 949 0.0 tr|A1UCS5|A1UCS5_MYCSK Tax_Id=189918 SubName: Full=UvrD/REP heli... 949 0.0 tr|A3PWI1|A3PWI1_MYCSJ Tax_Id=164757 SubName: Full=UvrD/REP heli... 941 0.0 tr|A1T623|A1T623_MYCVP Tax_Id=350058 SubName: Full=UvrD/REP heli... 921 0.0 tr|A0QTR9|A0QTR9_MYCS2 Tax_Id=246196 SubName: Full=Helicase, Uvr... 919 0.0 tr|A4TFE1|A4TFE1_MYCGI Tax_Id=350054 SubName: Full=UvrD/REP heli... 887 0.0 tr|B1MEY6|B1MEY6_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-... 713 0.0 tr|C1B1I9|C1B1I9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-... 619 e-175 tr|Q0S2T4|Q0S2T4_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-... 612 e-173 tr|C0ZX41|C0ZX41_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-... 602 e-170 tr|C3JKU2|C3JKU2_RHOER Tax_Id=596309 SubName: Full=UvrD/REP heli... 602 e-169 tr|D0LEA2|D0LEA2_GORB4 Tax_Id=526226 SubName: Full=UvrD/REP heli... 573 e-161 tr|C6WM79|C6WM79_ACTMD Tax_Id=446462 SubName: Full=UvrD/REP heli... 563 e-158 tr|C7MVN2|C7MVN2_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helic... 563 e-158 tr|C2ARP8|C2ARP8_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helic... 510 e-142 tr|A8M3F8|A8M3F8_SALAI Tax_Id=391037 SubName: Full=UvrD/REP heli... 406 e-111 tr|C4E8U2|C4E8U2_STRRS Tax_Id=479432 SubName: Full=DNA/RNA helic... 378 e-102 tr|Q47SK6|Q47SK6_THEFY Tax_Id=269800 SubName: Full=Putative ATP-... 374 e-101 tr|D1ACX8|D1ACX8_THECU Tax_Id=471852 SubName: Full=UvrD/REP heli... 368 3e-99 tr|A4F8N4|A4F8N4_SACEN Tax_Id=405948 SubName: Full=Possible ATP-... 356 8e-96 tr|Q5YR01|Q5YR01_NOCFA Tax_Id=37329 SubName: Full=Putative helic... 347 7e-93 tr|A4XB81|A4XB81_SALTO Tax_Id=369723 SubName: Full=UvrD/REP heli... 279 1e-72 tr|Q2J6E2|Q2J6E2_FRASC Tax_Id=106370 SubName: Full=UvrD/REP heli... 262 2e-67 tr|A8L2I8|A8L2I8_FRASN Tax_Id=298653 SubName: Full=UvrD/REP heli... 261 3e-67 tr|C4RR19|C4RR19_9ACTO Tax_Id=219305 SubName: Full=UvrD/REP heli... 261 5e-67 tr|Q0RD02|Q0RD02_FRAAA Tax_Id=326424 SubName: Full=Putative ATP-... 256 9e-66 tr|A0LVT8|A0LVT8_ACIC1 Tax_Id=351607 SubName: Full=UvrD/REP heli... 244 4e-62 tr|A4ALD4|A4ALD4_9ACTN Tax_Id=312284 SubName: Full=ATP-dependent... 243 1e-61 tr|C6R6J4|C6R6J4_9CORY Tax_Id=553206 SubName: Full=Helicase, uvr... 237 7e-60 tr|C1YL28|C1YL28_NOCDA Tax_Id=446468 SubName: Full=DNA/RNA helic... 237 7e-60 tr|C0U8X9|C0U8X9_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helic... 234 4e-59 tr|C2BJG0|C2BJG0_9CORY Tax_Id=525264 SubName: Full=Helicase;[Cor... 233 1e-58 tr|A3TGM2|A3TGM2_9MICO Tax_Id=313589 SubName: Full=Putative ATP-... 232 2e-58 tr|Q4JTS1|Q4JTS1_CORJK Tax_Id=306537 SubName: Full=Putative ATP-... 232 2e-58 tr|B1VFC4|B1VFC4_CORU7 Tax_Id=504474 SubName: Full=Putative ATP-... 230 7e-58 tr|C8RQU9|C8RQU9_CORJE Tax_Id=525262 SubName: Full=ATP-dependent... 229 2e-57 tr|C4DDU1|C4DDU1_9ACTO Tax_Id=446470 SubName: Full=DNA/RNA helic... 216 1e-53 >tr|B2HEW0|B2HEW0_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium marinum] Length = 1057 Score = 1622 bits (4201), Expect = 0.0 Identities = 857/1057 (81%), Positives = 857/1057 (81%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQ DPESVLLLTGSGR Sbjct: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQAAIAHIAAGADPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA Sbjct: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER Sbjct: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDP Sbjct: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXX 300 VDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF Sbjct: 241 LLAAERARLRFLLVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFGFRGGEPAGLL 300 Query: 301 XXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXX 360 AVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTV Sbjct: 301 GGPLDGGPAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVRLAATA 360 Query: 361 XXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA 420 VDGVPWSQMAVI SIPPIGGSLA Sbjct: 361 HAEAAAIADALRRAHLVDGVPWSQMAVIVRSVPRVAARLPRALAAAGVPVSIPPIGGSLA 420 Query: 421 EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFG 480 EEP NADQALALITGPIGRVDPV AVAGRSPEDFG Sbjct: 421 EEPAVGALLTVLAATAEGLNADQALALITGPIGRVDPVTLRQLRRTLRRAVAGRSPEDFG 480 Query: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWH 540 DLLVATLSEDGRPAVGSAGSNQPPGPQFGP CHRAGQDPRYILWAAWH Sbjct: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPLRRVRAVLAAATRCHRAGQDPRYILWAAWH 540 Query: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL Sbjct: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 Query: 601 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD Sbjct: 601 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 Query: 661 GVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 GVSGN VTAVDGDTSGGGQQAALPSEFFFEIAQW Sbjct: 661 GVSGNASARAPLLAEERRLLLAAMGRARRQLLVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 Query: 721 ANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVA 780 ANGD PDGAVDDAARQCAATQLARLAKAGVA Sbjct: 721 ANGDSQAVAAPPVSAPRVLSAAAVVGRLRGVVCAPDGAVDDAARQCAATQLARLAKAGVA 780 Query: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI Sbjct: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 Query: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS Sbjct: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 Query: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ 960 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ Sbjct: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ 960 Query: 961 QNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR 1020 QNAQLAMYQL RLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR Sbjct: 961 QNAQLAMYQLAVAEGMVEAGAEPGGARLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR 1020 Query: 1021 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR Sbjct: 1021 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 >tr|A0PR95|A0PR95_MYCUA Tax_Id=362242 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium ulcerans] Length = 1057 Score = 1607 bits (4160), Expect = 0.0 Identities = 851/1057 (80%), Positives = 852/1057 (80%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQ DPESVLLLTGSGR Sbjct: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQAAIAHIAAGADPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA Sbjct: 61 MGMRARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGDLEDGPSA SAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER Sbjct: 121 EQDAIIRELLAGDLEDGPSAGSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALG AELVGSALEAFASDP Sbjct: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGVAELVGSALEAFASDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXX 300 VDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF Sbjct: 241 LLAAERARLRFLLVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFGFRGGEPAGLL 300 Query: 301 XXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXX 360 AVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTV Sbjct: 301 GGPLDGGPAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVRLAATA 360 Query: 361 XXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA 420 VDGVPWSQMAVI SIPPIGGSLA Sbjct: 361 HAEAAAIADALRRAHLVDGVPWSQMAVIVRSVPRVAARLPRALAAAGVPVSIPPIGGSLA 420 Query: 421 EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFG 480 EEP NADQALALITGPIGRVDPV AVAGRSPEDFG Sbjct: 421 EEPAVGALLTVLAATAEGLNADQALALITGPIGRVDPVRLRQLRRTLRRAVAGRSPEDFG 480 Query: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWH 540 DLLVATLSEDGRPAVGSAGSNQPPGPQFGP CHRAGQDPRYILWAAWH Sbjct: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPLRRVRAVLAAATRCHRAGQDPRYILWAAWH 540 Query: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL Sbjct: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 Query: 601 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 PRVSEEPVAQNEQV VLSAHAALGHEWDLVVIAGLQDG WPNTIPRGGVLATQRLLDELD Sbjct: 601 PRVSEEPVAQNEQVGVLSAHAALGHEWDLVVIAGLQDGSWPNTIPRGGVLATQRLLDELD 660 Query: 661 GVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 GVSGN VTAVDGDTSGGGQQAALPSEFFFEIAQW Sbjct: 661 GVSGNASARAPLLAEERRLLLAAMGRARRQLLVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 Query: 721 ANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVA 780 ANGD PDGAVDDAARQCAATQLARLAKAGVA Sbjct: 721 ANGDSQAVAAPPVSAPRVLSAAAVVGRLRGVVCAPDGAVDDAARQCAATQLARLAKAGVA 780 Query: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI Sbjct: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 Query: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS Sbjct: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 Query: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ 960 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVI+DIKTAKTPVSKDDAQ Sbjct: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVILDIKTAKTPVSKDDAQ 960 Query: 961 QNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR 1020 QNAQLAMYQL RLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR Sbjct: 961 QNAQLAMYQLAVAEGMVEAGAEPGGARLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVR 1020 Query: 1021 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR Sbjct: 1021 QAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 >tr|Q7TX11|Q7TX11_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE ATP-DEPENDENT DNA HELICASE; EC=3.6.1.-;[Mycobacterium bovis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRAVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|O53348|O53348_MYCTU Tax_Id=1773 SubName: Full=Helicase, UvrD/Rep family; SubName: Full=POSSIBLE ATP-DEPENDENT DNA HELICASE; EC=3.6.1.-;[Mycobacterium tuberculosis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|C6DXE2|C6DXE2_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium tuberculosis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|C1AGX1|C1AGX1_MYCBT Tax_Id=561275 SubName: Full=Putative ATP-dependent DNA helicase;[Mycobacterium bovis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRAVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|A5U7M2|A5U7M2_MYCTA Tax_Id=419947 SubName: Full=UvrD/Rep family helicase;[Mycobacterium tuberculosis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|A1KNK0|A1KNK0_MYCBP Tax_Id=410289 SubName: Full=Possible ATP-dependent DNA helicase; EC=3.6.1.-;[Mycobacterium bovis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRAVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|A5WSB1|A5WSB1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ATP-dependent DNA helicase;[Mycobacterium tuberculosis] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|A4KL98|A4KL98_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ATP-dependent DNA helicase;[Mycobacterium tuberculosis str. Haarlem] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|A2VNZ9|A2VNZ9_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 1055 Score = 1189 bits (3076), Expect = 0.0 Identities = 651/1060 (61%), Positives = 710/1060 (66%), Gaps = 20/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS WG EA L PG RG V VLGGPGTGKS LLV+ DPESVLLLTGSGR Sbjct: 1 MSHIWGVEAGAALAPGLRGPVLVLGGPGTGKSTLLVEAAVAHIGAGTDPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 MGM ARS+LTTALLRS T G RAA+REP+VR+VHSYAYAVLR+AA+R GDA PRLLTSA Sbjct: 61 MGMRARSALTTALLRSRTNGPCRAAIREPVVRTVHSYAYAVLRKAAQRAGDALPRLLTSA 120 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGD EDGP+A + WP HL PALTTAGFATELRNLLARCAERG+DP+EL++ Sbjct: 121 EQDAIIRELLAGDAEDGPAATTTWPAHLRPALTTAGFATELRNLLARCAERGLDPLELQQ 180 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR GRPEW AAG+FA++YEQVMLLR AVG A PQATAPAL AAELVG+ALEAFA DP Sbjct: 181 LGRRRGRPEWIAAGQFAQRYEQVMLLRGAVGLAAPQATAPALSAAELVGAALEAFAVDPE 240 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-----XXXXXX 295 VDDAQQLDPQAARLV +LAAG E ALIAGDPNQAVF Sbjct: 241 LLAAERARVRTLLVDDAQQLDPQAARLVRMLAAGTELALIAGDPNQAVFGFRGGEPTGLL 300 Query: 296 XXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVX 355 +VTLT+SHRCAPAVARAV+GIARRLPG S GR I+GTGTE GSVTV Sbjct: 301 ADDPPPAGGAPIPSVTLTVSHRCAPAVARAVTGIARRLPGRSVGRRIEGTGTEVGSVTVR 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 +DGVPWSQMAVI + P + Sbjct: 361 LAGSAHAEAAMIADALRRAHLIDGVPWSQMAVI-VRSVPRAVRLPRALAAAGVPVAPPAV 419 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRS 475 GG L+ EP + DQAL L+TGPIG VDPV A G++ Sbjct: 420 GGPLSAEPAVRALLTVLEATADGLDGDQALLLLTGPIGGVDPVSLRQLRRTLQRARPGQT 479 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRA----GQDP 531 FGDLLV L D P+ GP CHR+ GQDP Sbjct: 480 SRKFGDLLVEVLGGDAPPS----------GPGSRALRRVRAVLTAAARCHRSGSLGGQDP 529 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 R+ LWAAW RSGLQ RWLAA + GG A VQATR+LE VTALFDITD YVSRTSGASL GL Sbjct: 530 RHTLWAAWQRSGLQRRWLAASEHGGAAAVQATRDLETVTALFDITDHYVSRTSGASLRGL 589 Query: 592 LEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLA 651 +EHV ALQLP V EP A EQV VLSAHAALGHEWDLVVIAGLQDGLWPNT+PRGGVL Sbjct: 590 VEHVTALQLPVVRPEPAAPTEQVMVLSAHAALGHEWDLVVIAGLQDGLWPNTVPRGGVLG 649 Query: 652 TQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPS 711 TQRLLDELDGV+ + VTAVD D GGG +A LPS Sbjct: 650 TQRLLDELDGVTKDASMRAPLLAEERRLLVTAMGRARRRLLVTAVDSDAGGGGHEAVLPS 709 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 FFFEIAQWA+GD P AVDDA R CAATQL Sbjct: 710 AFFFEIAQWADGDGEPVAMQPVSAPRVLSAAAVVGRLRVVVCAPACAVDDADRDCAATQL 769 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 ARLAKAGV GADP+ WHGL PVST+ L + D+VTLTPSTLQ LNDCPLRWLAERHGGT Sbjct: 770 ARLAKAGVPGADPSEWHGLAPVSTSDPLCDSDDLVTLTPSTLQALNDCPLRWLAERHGGT 829 Query: 832 NPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 N R+L + +GSVLHAL AEPG SE QLLAEL RVW LPF A W+S+NELARHRAMIQAF Sbjct: 830 NTRELPSAVGSVLHALFAEPGRSESQLLAELDRVWGHLPFGAQWYSANELARHRAMIQAF 889 Query: 892 VEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAK 951 V+WR Q+RSELTEVGVE+DIDG L+ IRLRGR DRLERD AGRLVIVDIKT K Sbjct: 890 VQWRAQSRSELTEVGVEVDIDGALEDGSGQARKIRLRGRADRLERDPAGRLVIVDIKTGK 949 Query: 952 TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAA 1011 TPVSKDDAQQ+AQLAMYQL RLVY GKS AAG A+R QDPLTPAA Sbjct: 950 TPVSKDDAQQHAQLAMYQLAVAEGLVRAGDEPGGARLVYVGKSGAAGVAERKQDPLTPAA 1009 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 RD+WRNLVRQ A A AGP FIARRNDGC+HCP+RP CPAH Sbjct: 1010 RDEWRNLVRQLAAATAGPQFIARRNDGCTHCPLRPGCPAH 1049 >tr|Q73UR5|Q73UR5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 1044 Score = 1165 bits (3014), Expect = 0.0 Identities = 639/1060 (60%), Positives = 705/1060 (66%), Gaps = 23/1060 (2%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS +W A+A +L PG RG VRVLGGPGTGKS+LLV +PESVLLLTGSGR Sbjct: 5 MSFTWDAQAGAVLAPGVRGTVRVLGGPGTGKSSLLVDAAVAQIEAGVNPESVLLLTGSGR 64 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 + M RS+LTTALLRS G AVREPLVR+VH YAYAVLRRAAER G+APPRL+TSA Sbjct: 65 LPMAERSALTTALLRSAGAGP---AVREPLVRTVHGYAYAVLRRAAERAGEAPPRLVTSA 121 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGDL DGP A +AWP L PAL+TAGFATELRNLLARCAERGVDP LER Sbjct: 122 EQDAIIRELLAGDLADGPRAATAWPAALRPALSTAGFATELRNLLARCAERGVDPQALER 181 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR RPEW AAG+FARQYEQVMLLRAAVGTA P+AT PALGAAELVG+ALEAFA D Sbjct: 182 LGRRCRRPEWVAAGQFARQYEQVMLLRAAVGTAAPEATTPALGAAELVGAALEAFAVDAE 241 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXX 300 VDDAQQLDPQAARLV VLAAGA+ ALIAGDPNQAVF Sbjct: 242 LLAAERGRIRVLLVDDAQQLDPQAARLVRVLAAGADLALIAGDPNQAVF---GFRGGDPG 298 Query: 301 XXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXX 360 AVTLT SHRCAPAVARAVSG+A RLPG SAGR I+G G +GSV V Sbjct: 299 SLLDGAAPAVTLTRSHRCAPAVARAVSGVAGRLPGSSAGRRIEGAGPGEGSVAVRLAASA 358 Query: 361 XXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA 420 VDGVPWSQMAVI + P G LA Sbjct: 359 HAEAAAIADALRRAHLVDGVPWSQMAVIVRSVPRAGARLPRALAAAGVPVTAPAASGPLA 418 Query: 421 EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFG 480 E+P + +ALAL+TGPIGRVDPV A AGR P DF Sbjct: 419 EQPAVRALLTVLLATADGLDGQRALALLTGPIGRVDPVSLRQLRRNLQRANAGRPPGDFA 478 Query: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWH 540 +LLV L+ G+ PPG F CHR GQDPRYILWAAWH Sbjct: 479 ELLVEALT----------GTAPPPGAPFRALRRVRAVLDAAGRCHRDGQDPRYILWAAWH 528 Query: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 RSGLQ RWL+ +RGGPA QA R+L++VTALFDITD YVSRTSGASL GL+EHVAALQL Sbjct: 529 RSGLQRRWLSVSERGGPAAAQAGRDLDSVTALFDITDDYVSRTSGASLRGLVEHVAALQL 588 Query: 601 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 P EPVA EQV VLSAHAALG EWD VVIAGLQDGLWPNT+PRGGVL TQRLLD LD Sbjct: 589 P--GAEPVATAEQVSVLSAHAALGREWDFVVIAGLQDGLWPNTVPRGGVLGTQRLLDVLD 646 Query: 661 GVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 GVS + VTAVD DT G ++AALPS F +EIAQW Sbjct: 647 GVSADASVRAPLLAEERRLLVAAMGRARQRLLVTAVDSDTDGSDREAALPSPFCYEIAQW 706 Query: 721 ANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVA 780 A D PDGAVD+ R+CAATQLARLAKAGV Sbjct: 707 AGEDAEPAALQPVSAPRVLSAAALVGRLRGVVCAPDGAVDELDRRCAATQLARLAKAGVP 766 Query: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 GADPA WHGLIPVST L G GDVVTLTPST+QTL DCPLRWLAERHGGT+PRDLR+ I Sbjct: 767 GADPASWHGLIPVSTAEPLRGGGDVVTLTPSTMQTLTDCPLRWLAERHGGTDPRDLRSAI 826 Query: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 GSV+HALIA+P S +L+AEL RVW+ LPF A W S NELARHRAM++AF +WR TR Sbjct: 827 GSVVHALIAQPHRSPAELVAELDRVWRHLPFAAQWHSDNELARHRAMLEAFAQWRANTRG 886 Query: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ 960 LTEVGVE++IDG L DG +RLRGRVDRLERD AGRLVIVD+KT KTPVSKDDAQ Sbjct: 887 ALTEVGVEVEIDGTLSTG--DGREVRLRGRVDRLERDAAGRLVIVDVKTGKTPVSKDDAQ 944 Query: 961 QNAQLAMYQL---XXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRN 1017 Q+AQLA+YQL RLVY GK+AA+G +R+QDPLT AA DQWR Sbjct: 945 QHAQLALYQLAVAHGLLGAAGGDAEPGGARLVYVGKAAASGVVEREQDPLTAAAADQWRE 1004 Query: 1018 LVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 +R+AA+A AGP FIARRNDGC+HCP+RP CPAH D S R Sbjct: 1005 ALRRAADATAGPQFIARRNDGCTHCPLRPCCPAHADGSGR 1044 >tr|A0QK58|A0QK58_MYCA1 Tax_Id=243243 SubName: Full=Helicase, UvrD/Rep family protein;[Mycobacterium avium] Length = 1042 Score = 1162 bits (3006), Expect = 0.0 Identities = 635/1060 (59%), Positives = 702/1060 (66%), Gaps = 21/1060 (1%) Query: 1 MSLSWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 MS +W A+A +L PG+ G VRVLGGPGTGKS+LLV +PESVLLLTGSGR Sbjct: 1 MSFTWDAQAGAVLAPGAHGTVRVLGGPGTGKSSLLVDAAVAQIEAGVNPESVLLLTGSGR 60 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 + M RS+LTTALLRS G AVREPLVR+VH YAYAVLRRAAER G+APPRL+TSA Sbjct: 61 LPMAERSALTTALLRSAGAGP---AVREPLVRTVHGYAYAVLRRAAERAGEAPPRLVTSA 117 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDAIIRELLAGDL DGP A +AWP L PAL+TAGFATELRNLLARCAERGVDP LER Sbjct: 118 EQDAIIRELLAGDLADGPRAATAWPAALRPALSTAGFATELRNLLARCAERGVDPQALER 177 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR RPEW AAG+FARQYEQVMLLRAAVGTA P+AT PALGAAELVG+ALEAFA D Sbjct: 178 LGRRCRRPEWVAAGQFARQYEQVMLLRAAVGTAAPEATTPALGAAELVGAALEAFAVDAE 237 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXX 300 VDDAQQLDPQAARLV VLAAGA+ ALIAGDPNQAVF Sbjct: 238 LLAAERGRIRVLLVDDAQQLDPQAARLVRVLAAGADLALIAGDPNQAVF---GFRGGDPG 294 Query: 301 XXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXX 360 AVTLT SHRCAPAVARAVSG+A RLPG SAGR I+G G +GSV V Sbjct: 295 SLLDGAAPAVTLTTSHRCAPAVARAVSGVAGRLPGSSAGRRIEGAGPGEGSVAVRLAASA 354 Query: 361 XXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA 420 VDGVPWSQMAVI + P G LA Sbjct: 355 HAEAAAIADALRRAHLVDGVPWSQMAVIVRSVPRAGARLPRALAAAGVPVTAPAASGPLA 414 Query: 421 EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFG 480 E+P + +ALAL+TGPIGRVDPV A AGR P DF Sbjct: 415 EQPAVRALLTVLLATADGLDGQRALALLTGPIGRVDPVSLRQLRRNLQRANAGRPPGDFA 474 Query: 481 DLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWH 540 +LLV L+ G+ PPG F CHR GQDPRYILWAAWH Sbjct: 475 ELLVEALT----------GTAPPPGALFRALRRVRAVLDAAGRCHRDGQDPRYILWAAWH 524 Query: 541 RSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQL 600 RSGLQ RWL+ +RGGPA QA R+L++VTALFDITD YVSRTSGASL GL+EHVAALQL Sbjct: 525 RSGLQRRWLSVSERGGPAAAQAGRDLDSVTALFDITDDYVSRTSGASLRGLVEHVAALQL 584 Query: 601 PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 P PVA EQV VLSAHAALG EWD VVIAGLQDGLWPNT+PRGGVL TQRLLD LD Sbjct: 585 PGAGPVPVATAEQVSVLSAHAALGREWDFVVIAGLQDGLWPNTVPRGGVLGTQRLLDVLD 644 Query: 661 GVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 GVS + VTAVD DT G +AALPS F +EIAQW Sbjct: 645 GVSADASVRAPLLAEERRLLVAAMGRARQRLLVTAVDSDTDGSDHEAALPSPFCYEIAQW 704 Query: 721 ANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVA 780 A D PDGAVD+ R+CAATQLARLA+AGV Sbjct: 705 AGEDVETAALQPVSAPRVLSAAALVGRLRGVVCAPDGAVDELDRRCAATQLARLAQAGVP 764 Query: 781 GADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 GADPA WHGLIPVST L G GDVVTLTPST+QTL DCPLRWLAERHGGT+PRDLR+ I Sbjct: 765 GADPASWHGLIPVSTAEPLRGGGDVVTLTPSTMQTLTDCPLRWLAERHGGTDPRDLRSAI 824 Query: 841 GSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRS 900 GSV+HALIA+P S +L+AEL R W+ LPF A W S NELARHRAM++AF +WR TR Sbjct: 825 GSVVHALIAQPHRSPAELVAELDRAWRHLPFAAQWHSDNELARHRAMLEAFAQWRANTRG 884 Query: 901 ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQ 960 LTEVGVE++IDG L DG +RLRGRVDRLERD AGRLVIVD+KT KTPVSKDDAQ Sbjct: 885 ALTEVGVEVEIDGTLSTG--DGREVRLRGRVDRLERDAAGRLVIVDVKTGKTPVSKDDAQ 942 Query: 961 QNAQLAMYQL---XXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRN 1017 Q+AQLA+YQL RLVY GK+AA+G +R+QDPLT AA DQWR Sbjct: 943 QHAQLALYQLAVAHGLLGAAGGDAEPGGARLVYVGKAAASGVVEREQDPLTAAAADQWRE 1002 Query: 1018 LVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTDRSPR 1057 +R+AA+A AGP FIARRNDGC+HCP+RP CPAH D S R Sbjct: 1003 ALRRAADATAGPQFIARRNDGCTHCPLRPCCPAHADGSGR 1042 >tr|Q1BC69|Q1BC69_MYCSS Tax_Id=164756 SubName: Full=UvrD/REP helicase;[Mycobacterium sp.] Length = 1051 Score = 949 bits (2454), Expect = 0.0 Identities = 547/1050 (52%), Positives = 634/1050 (60%), Gaps = 23/1050 (2%) Query: 8 EARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARS 67 E R LL PG RG+VR+ GGPGTGKS LLV DPESVLLLTGS + AR+ Sbjct: 15 EPRSLLEPGRRGVVRLFGGPGTGKSTLLVDTAAAHIAAGVDPESVLLLTGSASLRSAARA 74 Query: 68 SLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIR 127 ++T LL G R VR PLVR+VHSYA+AVLR AA+R GDAPPRL+TSAEQD IIR Sbjct: 75 AVTRRLL----DGGARQVVRAPLVRTVHSYAFAVLRLAAQRNGDAPPRLITSAEQDGIIR 130 Query: 128 ELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGR 187 ELLAGDLEDG + AWP L PALTTAGFATELR+L+ARC ERGVDP+ L+RLGR S R Sbjct: 131 ELLAGDLEDGDRSAVAWPAALRPALTTAGFATELRDLMARCTERGVDPVALQRLGRLSRR 190 Query: 188 PEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXX 247 PEWAAAGRFA+ YEQ+MLLR+AVG A PQAT PALGAAELVG+ALEAFA D Sbjct: 191 PEWAAAGRFAQAYEQIMLLRSAVGMAAPQATTPALGAAELVGAALEAFAMDADLLAAERN 250 Query: 248 XXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXX 307 VDDAQ LDPQAARLV VLAAGA+ + AGDP+Q+VF Sbjct: 251 RIGLLLVDDAQHLDPQAARLVRVLAAGADLTVFAGDPDQSVF---GYRGADPALLRTEEG 307 Query: 308 XAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXX 367 A+ LT SHRCAPAVARA+SGIARRLPG + G DGSV V Sbjct: 308 SAIVLTRSHRCAPAVARAMSGIARRLPGPRPEFVGNEDGRGDGSVAVRVAATAHAESALI 367 Query: 368 XXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXX 427 VDGVPWS+MAVI + P L EEP Sbjct: 368 ADALRRAHLVDGVPWSEMAVIVRSLPRAGAPLARALTAAGVPVDL-PAAAPLVEEPAARA 426 Query: 428 XXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVATL 487 QA AL++GP+GRVDPV A + P +F DLLV L Sbjct: 427 LLTVLEATADGLTGAQAEALLSGPVGRVDPVTMRQVRRALRRADGSQPPREFTDLLVDAL 486 Query: 488 SEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNR 547 + PA + P G DPR+ LW AWHRSGLQ R Sbjct: 487 T-GPLPAASDVSAELQ-----RPLRRVRSVLAAARRSVDDGLDPRHTLWQAWHRSGLQRR 540 Query: 548 WLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEP 607 WLAA +RGG AG QA R+L+AVTALFD+ DQYV+RT+GAS+ GLL+HVAAL LP Sbjct: 541 WLAASERGGAAGAQADRDLDAVTALFDVADQYVTRTAGASVRGLLDHVAALGLPPGRRGE 600 Query: 608 VAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGV----S 663 E V VLSAHAAL EWDLVV+AGLQ+GLWPNTIPRGGVL TQRL+D LDGV S Sbjct: 601 RRDPEAVAVLSAHAALAGEWDLVVVAGLQEGLWPNTIPRGGVLGTQRLVDVLDGVTDSAS 660 Query: 664 GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANG 723 VTAVD D+ G +A LPS F E+ A Sbjct: 661 DAVSTRAPLLAEERRLLIAALGRARRRVLVTAVDSDS---GAEAMLPSPFCQELTALAT- 716 Query: 724 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGAD 783 D PDGAVDDAAR+CAA QLARLA AGV GAD Sbjct: 717 DPGDGPPAPVRAPRVLAPSALVGRLRAVVCAPDGAVDDAARECAAAQLARLAAAGVPGAD 776 Query: 784 PAGWHGLIPVSTTAALYG-AGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGS 842 P WH + +ST L+ VVTL+PSTLQ L DCPLRWL ERHGG + RD+R+ +GS Sbjct: 777 PGQWHAMTALSTDEPLWNDEQQVVTLSPSTLQALTDCPLRWLLERHGGRDGRDVRSAVGS 836 Query: 843 VLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSEL 902 +LHAL++EPG +E QLL +L RVW LP+EA W + NEL RH+AM+ AF +WR QTR EL Sbjct: 837 LLHALVSEPGRTESQLLNDLERVWADLPYEAQWHADNELTRHQAMLSAFEQWRAQTRREL 896 Query: 903 TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQN 962 TEVG EID+DGV+ A D A+R+RGR+DRLERD AGRLV+VDIKT K+PV+KDDAQ++ Sbjct: 897 TEVGTEIDVDGVVCDADDGRPAVRVRGRLDRLERDSAGRLVVVDIKTGKSPVTKDDAQRH 956 Query: 963 AQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQA 1022 AQLAMYQL +LVY GKS AAG +R+QD LTP QWR V +A Sbjct: 957 AQLAMYQLAVAAGLLAEGDVPGGGKLVYLGKSGAAGPTEREQDALTPETVAQWRQDVGEA 1016 Query: 1023 AEAAAGPHFIARRNDGCSHCPIRPSCPAHT 1052 A A GP F+AR ND C+HCP+R SCPA + Sbjct: 1017 AAATQGPGFVARVNDSCAHCPVRSSCPAQS 1046 >tr|A1UCS5|A1UCS5_MYCSK Tax_Id=189918 SubName: Full=UvrD/REP helicase; Flags: Precursor;[Mycobacterium sp.] Length = 1051 Score = 949 bits (2454), Expect = 0.0 Identities = 547/1050 (52%), Positives = 634/1050 (60%), Gaps = 23/1050 (2%) Query: 8 EARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARS 67 E R LL PG RG+VR+ GGPGTGKS LLV DPESVLLLTGS + AR+ Sbjct: 15 EPRSLLEPGRRGVVRLFGGPGTGKSTLLVDTAAAHIAAGVDPESVLLLTGSASLRSAARA 74 Query: 68 SLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIR 127 ++T LL G R VR PLVR+VHSYA+AVLR AA+R GDAPPRL+TSAEQD IIR Sbjct: 75 AVTRRLL----DGGARQVVRAPLVRTVHSYAFAVLRLAAQRNGDAPPRLITSAEQDGIIR 130 Query: 128 ELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGR 187 ELLAGDLEDG + AWP L PALTTAGFATELR+L+ARC ERGVDP+ L+RLGR S R Sbjct: 131 ELLAGDLEDGDRSAVAWPAALRPALTTAGFATELRDLMARCTERGVDPVALQRLGRLSRR 190 Query: 188 PEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXX 247 PEWAAAGRFA+ YEQ+MLLR+AVG A PQAT PALGAAELVG+ALEAFA D Sbjct: 191 PEWAAAGRFAQAYEQIMLLRSAVGMAAPQATTPALGAAELVGAALEAFAMDADLLAAERN 250 Query: 248 XXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXX 307 VDDAQ LDPQAARLV VLAAGA+ + AGDP+Q+VF Sbjct: 251 RIGLLLVDDAQHLDPQAARLVRVLAAGADLTVFAGDPDQSVF---GYRGADPALLRTEEG 307 Query: 308 XAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXX 367 A+ LT SHRCAPAVARA+SGIARRLPG + G DGSV V Sbjct: 308 SAIVLTRSHRCAPAVARAMSGIARRLPGPRPEFVGNEDGRGDGSVAVRVAATAHAESALI 367 Query: 368 XXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXX 427 VDGVPWS+MAVI + P L EEP Sbjct: 368 ADALRRAHLVDGVPWSEMAVIVRSLPRAGAPLARALTAAGVPVDL-PAAAPLVEEPAARA 426 Query: 428 XXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVATL 487 QA AL++GP+GRVDPV A + P +F DLLV L Sbjct: 427 LLTVLEATADGLTGAQAEALLSGPVGRVDPVTMRQVRRALRRADGSQPPREFTDLLVDAL 486 Query: 488 SEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNR 547 + PA + P G DPR+ LW AWHRSGLQ R Sbjct: 487 T-GPLPAASDVSAELQ-----RPLRRVRSVLAAARRSVDDGLDPRHTLWQAWHRSGLQRR 540 Query: 548 WLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEP 607 WLAA +RGG AG QA R+L+AVTALFD+ DQYV+RT+GAS+ GLL+HVAAL LP Sbjct: 541 WLAASERGGAAGAQADRDLDAVTALFDVADQYVTRTAGASVRGLLDHVAALGLPPGRRGE 600 Query: 608 VAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGV----S 663 E V VLSAHAAL EWDLVV+AGLQ+GLWPNTIPRGGVL TQRL+D LDGV S Sbjct: 601 RRDPEAVAVLSAHAALAGEWDLVVVAGLQEGLWPNTIPRGGVLGTQRLVDVLDGVTDSAS 660 Query: 664 GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANG 723 VTAVD D+ G +A LPS F E+ A Sbjct: 661 DAVSTRAPLLAEERRLLIAALGRARRRVLVTAVDSDS---GAEAMLPSPFCQELTALAT- 716 Query: 724 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGAD 783 D PDGAVDDAAR+CAA QLARLA AGV GAD Sbjct: 717 DPGDGPPAPVRAPRVLAPSALVGRLRAVVCAPDGAVDDAARECAAAQLARLAAAGVPGAD 776 Query: 784 PAGWHGLIPVSTTAALYG-AGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGS 842 P WH + +ST L+ VVTL+PSTLQ L DCPLRWL ERHGG + RD+R+ +GS Sbjct: 777 PGQWHAMTALSTDEPLWNDEQQVVTLSPSTLQALTDCPLRWLLERHGGRDGRDVRSAVGS 836 Query: 843 VLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSEL 902 +LHAL++EPG +E QLL +L RVW LP+EA W + NEL RH+AM+ AF +WR QTR EL Sbjct: 837 LLHALVSEPGRTESQLLNDLERVWADLPYEAQWHADNELTRHQAMLSAFEQWRAQTRREL 896 Query: 903 TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQN 962 TEVG EID+DGV+ A D A+R+RGR+DRLERD AGRLV+VDIKT K+PV+KDDAQ++ Sbjct: 897 TEVGTEIDVDGVVCDADDGRPAVRVRGRLDRLERDSAGRLVVVDIKTGKSPVTKDDAQRH 956 Query: 963 AQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQA 1022 AQLAMYQL +LVY GKS AAG +R+QD LTP QWR V +A Sbjct: 957 AQLAMYQLAVAAGLLAEGDVPGGGKLVYLGKSGAAGPTEREQDALTPETVAQWRQDVGEA 1016 Query: 1023 AEAAAGPHFIARRNDGCSHCPIRPSCPAHT 1052 A A GP F+AR ND C+HCP+R SCPA + Sbjct: 1017 AAATQGPGFVARVNDSCAHCPVRSSCPAQS 1046 >tr|A3PWI1|A3PWI1_MYCSJ Tax_Id=164757 SubName: Full=UvrD/REP helicase;[Mycobacterium sp.] Length = 1051 Score = 941 bits (2431), Expect = 0.0 Identities = 544/1050 (51%), Positives = 631/1050 (60%), Gaps = 23/1050 (2%) Query: 8 EARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARS 67 + R LL PG RG+VR+ GGPGTGKS LLV DPESVLLLTGS + AR+ Sbjct: 15 DPRSLLEPGQRGVVRLFGGPGTGKSTLLVDTAAAHIAAGVDPESVLLLTGSASLRSAARA 74 Query: 68 SLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIR 127 ++T LL G R VR PLVR+VHSYA+AVLR AA+R GDAPPRL+TSAEQD IIR Sbjct: 75 AVTRRLL----DGGARQVVRAPLVRTVHSYAFAVLRLAAQRNGDAPPRLITSAEQDGIIR 130 Query: 128 ELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGR 187 ELLAGDLEDG + AWP L PALTTAGFATELR+L+ARC ERGVDP+ L+RLGR S R Sbjct: 131 ELLAGDLEDGDRSAVAWPAALRPALTTAGFATELRDLMARCTERGVDPVALQRLGRLSRR 190 Query: 188 PEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXX 247 PEWAAAGRFA+ YEQ+MLLR+AVG A PQAT PALGAAELVG+ALEAFA D Sbjct: 191 PEWAAAGRFAQAYEQIMLLRSAVGMAAPQATTPALGAAELVGAALEAFAMDADLLAAERS 250 Query: 248 XXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXX 307 VDDAQ LDPQAARLV VLAAGA+ ++ AGDP+Q+VF Sbjct: 251 RIGLLLVDDAQHLDPQAARLVRVLAAGADLSVFAGDPDQSVF---GFRGADPALLHMEEG 307 Query: 308 XAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXX 367 AV LT SHRCA AVARA+SGIARRLPG G DGSV V Sbjct: 308 SAVVLTRSHRCASAVARAISGIARRLPGQRQEFVGSEDGGGDGSVAVRVAATAHAESALI 367 Query: 368 XXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXX 427 VDGV WS+MAVI + P L EEP Sbjct: 368 ADALRRAHLVDGVAWSEMAVIVRSLPRAGAPLARALTAAGVPVDL-PAAAPLVEEPAARA 426 Query: 428 XXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVATL 487 QA AL++GP+GRVDPV A + P +F DLLV L Sbjct: 427 LLTVLEATADGLTGAQAEALLSGPVGRVDPVTMRQVRRALRRADGSQPPREFTDLLVEAL 486 Query: 488 SEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNR 547 + PA + P G DPR+ LW AWHRSGLQ R Sbjct: 487 T-GPLPAASDVSAELQ-----RPLRRVRSVLAAARRSVDDGLDPRHTLWQAWHRSGLQRR 540 Query: 548 WLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEP 607 WLAA +RGG AG +A R+L+AVTALFD+ DQYV+RT+GAS+ GLL+HVAAL LP Sbjct: 541 WLAASERGGAAGARADRDLDAVTALFDVADQYVTRTAGASVRGLLDHVAALGLPPGRRGE 600 Query: 608 VAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGV----S 663 E V VLSAHAAL EWD VVIAGLQ+GLWPNTIPRGGVL TQRL+D LDGV S Sbjct: 601 RRDPEAVAVLSAHAALAGEWDFVVIAGLQEGLWPNTIPRGGVLGTQRLVDVLDGVTDSAS 660 Query: 664 GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANG 723 VTAVD D+ G +A LPS F E+ A Sbjct: 661 DAVSTRAPLLAEERRLLIAAFGRARRRVLVTAVDSDS---GAEALLPSPFCQELTALAT- 716 Query: 724 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGAD 783 D PDGAVDDAAR+CAA QLARLA AGV GAD Sbjct: 717 DPDDGPPAPLRAPRVLAPSALVGRLRAVVCAPDGAVDDAARECAAAQLARLAAAGVPGAD 776 Query: 784 PAGWHGLIPVSTTAALYG-AGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGS 842 P WH + +ST L+ VVTL+PSTLQ L DCPLRWL ERHGG + RD+R+ +GS Sbjct: 777 PGQWHAMTTLSTDEPLWNDEQQVVTLSPSTLQALTDCPLRWLLERHGGRDGRDVRSAVGS 836 Query: 843 VLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSEL 902 +LHAL++EPG +E QLL +L RVW LP+EA W + NEL RH+AM+ AF +WR QTR EL Sbjct: 837 LLHALVSEPGRTESQLLNDLERVWADLPYEAQWHADNELTRHQAMLSAFEQWRAQTRREL 896 Query: 903 TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQN 962 TEVG EID+DGV+ A D A+R+RGR+DRLERD AGRLV+VDIKT K+PV+KDDAQ++ Sbjct: 897 TEVGTEIDVDGVVCDADDGRPAVRVRGRLDRLERDSAGRLVVVDIKTGKSPVTKDDAQRH 956 Query: 963 AQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQA 1022 AQLAMYQL +LVY GKS AAG +R+QD LTP QWR V +A Sbjct: 957 AQLAMYQLAVAAGLLAEGDVPGGGKLVYLGKSGAAGPTEREQDALTPDTVAQWRQDVGEA 1016 Query: 1023 AEAAAGPHFIARRNDGCSHCPIRPSCPAHT 1052 A A GP F+AR ND C+HCP+R SCPA + Sbjct: 1017 AAATQGPGFVARVNDSCAHCPVRSSCPAQS 1046 >tr|A1T623|A1T623_MYCVP Tax_Id=350058 SubName: Full=UvrD/REP helicase;[Mycobacterium vanbaalenii] Length = 1038 Score = 921 bits (2381), Expect = 0.0 Identities = 525/1039 (50%), Positives = 627/1039 (60%), Gaps = 31/1039 (2%) Query: 18 RGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSH 77 RG VRVLGGPGTGKS+LLV DPESVLLLTGS R+ AR+++TTALL Sbjct: 19 RGTVRVLGGPGTGKSSLLVDTAAAHIAAGCDPESVLLLTGSSRLSAQARAAITTALL--- 75 Query: 78 TTGTG-RAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLED 136 G G R+AVREPLVR+VHSYA+AVLR AA+R G PPRL+TSAEQD IIRELLAGD+ED Sbjct: 76 --GAGARSAVREPLVRTVHSYAFAVLRLAAQRNGSPPPRLITSAEQDGIIRELLAGDVED 133 Query: 137 GPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRF 196 G ++ WP L PAL+T GFATELR+L+ARC+ERGVDP+ L+R+GR +GRPEW AAGRF Sbjct: 134 GDASPVRWPERLRPALSTVGFATELRDLMARCSERGVDPLALQRIGRAAGRPEWQAAGRF 193 Query: 197 ARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDD 256 A+ YEQVMLLRAAVG A PQAT PALGAAELVG+ALEAFA+D VDD Sbjct: 194 AQAYEQVMLLRAAVGMAAPQATVPALGAAELVGAALEAFATDADLLAAERARVQLLLVDD 253 Query: 257 AQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTMSH 316 AQ LDPQAARLVEVLA GAE A+IAGDP+Q VF A+TLT SH Sbjct: 254 AQHLDPQAARLVEVLATGAELAVIAGDPHQTVF----GYRGADPALLRGEGPALTLTRSH 309 Query: 317 RCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXXXX 376 RCA VA A+ + RRLPG A R G+ GSVTV Sbjct: 310 RCANPVADAIGAVGRRLPGAEATREFTGSDA-PGSVTVQIAASPHAESALIADALRRAHL 368 Query: 377 VDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXXXX 436 VDGVPWSQMAVI +P LAE+P Sbjct: 369 VDGVPWSQMAVIVRSVPRMGAALGRALTAAGVPLDLPQPEVPLAEQPAVRALLTVLEATA 428 Query: 437 XXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVATLSEDGRPAVG 496 + ++ALAL+TGPIGRVDP+ A A SP F DLLV L D PA+ Sbjct: 429 DGLDGERALALVTGPIGRVDPISLRQLRRALRRA-APESPGGFSDLLVDALQRD-TPALA 486 Query: 497 SAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGG 556 Q R G DPR+ LW AWHRSGLQ RWLAA +RGG Sbjct: 487 DG--------QARALRRVCAVLTAARRSAREGSDPRHTLWQAWHRSGLQKRWLAASERGG 538 Query: 557 PAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVAQNEQVRV 616 PAG QA R+L+AVTA+FD+ +QYV+RT+GASL GL++H+ AL LP + A + V + Sbjct: 539 PAGAQADRDLDAVTAMFDVAEQYVARTAGASLRGLVDHITALALPPARRDEAAP-DAVAL 597 Query: 617 LSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVSG----NXXXXXXX 672 LSAH+ALGHEW+ VV+AG+Q+GLWPN PRGGVLATQ+L+D +DGV Sbjct: 598 LSAHSALGHEWEFVVLAGVQEGLWPNVSPRGGVLATQQLVDVIDGVCAPGQHTLSSRAPL 657 Query: 673 XXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXX 732 VTAVD D G A LPS F E+A A Sbjct: 658 LAEEWRLLIAAMGRARSRLLVTAVDSDC---GDDAMLPSSFCHELAALATEPQSQPAPPV 714 Query: 733 XXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGADPAGWHGLIP 792 P GAVDD R CAA QLARLA+AGV GADPA W+G Sbjct: 715 RAPRVLAPSALVGRLRSVVCAAP-GAVDDVERDCAAAQLARLAEAGVHGADPASWYGSRE 773 Query: 793 VSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGSVLHALIAEP 851 +S+ L+ G+ VVTL+PSTLQ L+DCPLRWL ERHGG+ RD+R+T+GS++HAL++E Sbjct: 774 LSSAEPLWEDGEQVVTLSPSTLQMLSDCPLRWLLERHGGSRGRDVRSTLGSLVHALVSES 833 Query: 852 GASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDI 911 G +E QLL L +VW+ LPF+A W+S NE RH M+ F+ WR TR ELTEVG EI++ Sbjct: 834 GRTESQLLNGLEKVWEELPFDAQWYSDNERVRHLEMLSTFLRWREGTRGELTEVGTEIEV 893 Query: 912 DGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLX 971 DG + A + A+RLRGR+DRLERD GRLV++D+KT K+PVSKDDAQ +AQLAMYQL Sbjct: 894 DGQIAAPDGELPAVRLRGRLDRLERDSEGRLVVIDLKTGKSPVSKDDAQSHAQLAMYQLA 953 Query: 972 XXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHF 1031 RLVY GK+ GA +R QD LTP R +W V +AA A GP F Sbjct: 954 VAAGLLADGDEPGGGRLVYLGKTTGGGATERHQDALTPDGRAEWDEQVHRAAAATQGPQF 1013 Query: 1032 IARRNDGCSHCPIRPSCPA 1050 AR NDGC+HCP+R CPA Sbjct: 1014 TARVNDGCAHCPVRAMCPA 1032 >tr|A0QTR9|A0QTR9_MYCS2 Tax_Id=246196 SubName: Full=Helicase, UvrD/Rep family protein;[Mycobacterium smegmatis] Length = 1045 Score = 919 bits (2375), Expect = 0.0 Identities = 521/1074 (48%), Positives = 632/1074 (58%), Gaps = 74/1074 (6%) Query: 9 ARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSS 68 A LL PGS G+VR+LGGPGTGKS+LLV DPESVLLLTGS R+ AR++ Sbjct: 13 ASTLLEPGSNGVVRLLGGPGTGKSSLLVDTAVQHILAGADPESVLLLTGSARLRTAARAA 72 Query: 69 LTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRE 128 +T LL + T G VREPLVR+VHSYA+AVLR AA+R GD PPRL+TSAEQD IIRE Sbjct: 73 ITARLLGAGTVGV----VREPLVRTVHSYAFAVLRLAAQRNGDPPPRLITSAEQDGIIRE 128 Query: 129 LLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRP 188 LLAGDLEDG + WP L PALTTAGFATELR+L+ARC ERGVDP+ L+RLGR + RP Sbjct: 129 LLAGDLEDGHRSPVGWPEQLWPALTTAGFATELRDLMARCTERGVDPIALQRLGRTAKRP 188 Query: 189 EWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXX 248 EW AAGRFA+ YEQ+MLLR+AVG A PQAT PALGAAELVG+ALEA +D Sbjct: 189 EWLAAGRFAQAYEQIMLLRSAVGMAAPQATVPALGAAELVGAALEALGADDELLDTERNR 248 Query: 249 XXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXX 308 VDDAQ LDPQAARLV LAAG +IAGDP+Q+VF Sbjct: 249 IKLLLVDDAQHLDPQAARLVRALAAGTGLTVIAGDPDQSVF---GYRGADPVLLRDDTHP 305 Query: 309 AVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXX 368 A+TLT S+RCAP +A A++G+ +RLPG S RH G +G+VTV Sbjct: 306 AITLTQSYRCAPEIASAITGLGQRLPGVSDTRHWTGNPQREGTVTVRLAASTHAEGTMIA 365 Query: 369 XXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA-------- 420 VDG+PWSQMAVI S+P +G +LA Sbjct: 366 DALRRAHLVDGIPWSQMAVI--------------------VRSVPRVGTALARALTAAGV 405 Query: 421 -------------EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXX 467 + +AD A+AL+TGPIGRVDPV Sbjct: 406 PVQDNGTDVPVGRQPAAAALLTVLDVTATGHLDADSAVALLTGPIGRVDPVTLRQLRRAL 465 Query: 468 XXAVAGRSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHR- 526 A + P DFGDLLV A +P G R Sbjct: 466 RRADGSQPPRDFGDLLV------------DAIEREPKGLSAEHARTLRRLRAVLTAARRS 513 Query: 527 --AGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTS 584 +G DPRY LW AWH SGLQ RWLAA +RGG G QA R+L+AVT LFD+ DQYV+RT+ Sbjct: 514 DASGADPRYTLWQAWHASGLQRRWLAASERGGSVGAQADRDLDAVTTLFDVADQYVNRTA 573 Query: 585 GASLSGLLEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTI 644 GASL GL++HV L EP E V VLS H AL EWD VVIAG+Q+GLWPN I Sbjct: 574 GASLRGLVDHVTRLGAAVARTEPETAAEAVAVLSVHGALAGEWDFVVIAGVQEGLWPNMI 633 Query: 645 PRGGVLATQRLLDELDGVSG----NXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDT 700 PRGGVL TQ L+D LDGV+ +TAVD DT Sbjct: 634 PRGGVLGTQHLVDVLDGVADMTDRTVSTRAPLVAEERRLLMAAMGRARTRVMITAVDSDT 693 Query: 701 SGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVD 760 G ++ LPS F EI+ WA PDGAVD Sbjct: 694 ---GDESLLPSPFCAEISAWAT---EPVAEPPLVAPRVLAPSALVGRLRAVVCAPDGAVD 747 Query: 761 DAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYG-AGDVVTLTPSTLQTLNDC 819 D AR CAA QLARLA AGV GADP+ WH + ++T L+ G VVTL+PSTLQ L DC Sbjct: 748 DDARACAAAQLARLAAAGVPGADPSQWHAMTSLTTEEPLWSEPGHVVTLSPSTLQMLTDC 807 Query: 820 PLRWLAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSN 879 PLRWL ERHGG + RD+R+T+GS++HAL++EPG +E QL+ EL +VW LP++A W+S N Sbjct: 808 PLRWLLERHGGDDGRDVRSTVGSLVHALVSEPGKTESQLVNELEKVWDDLPYDAKWYSDN 867 Query: 880 ELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGA 939 ELARHRAM++ F WR TR +LTEV EI ++G++ ++ +R+RGR+DRLERD A Sbjct: 868 ELARHRAMLETFTRWREDTRRQLTEVATEIPVEGIVVEPGENTPGVRVRGRLDRLERDEA 927 Query: 940 GRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGA 999 GRLV+VD+KT K+PV+KDDAQ +AQLAMYQL +LVY GK+ AAGA Sbjct: 928 GRLVVVDLKTGKSPVTKDDAQNHAQLAMYQLAVAAGLLDDGDEPGGGKLVYLGKAGAAGA 987 Query: 1000 AQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 +R+QDPLTP R +W V +AA A AGP F+AR N+GC++CP+R SCPA + Sbjct: 988 TEREQDPLTPDKRAEWLETVGEAAAATAGPRFVARVNNGCANCPVRSSCPAQAN 1041 >tr|A4TFE1|A4TFE1_MYCGI Tax_Id=350054 SubName: Full=UvrD/REP helicase;[Mycobacterium gilvum] Length = 1038 Score = 887 bits (2292), Expect = 0.0 Identities = 504/1042 (48%), Positives = 606/1042 (58%), Gaps = 28/1042 (2%) Query: 18 RGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSH 77 RG VRVLGGPGTGKS+LLV DPESVLLLTGS R+ + R+S+T+ALL + Sbjct: 19 RGTVRVLGGPGTGKSSLLVDTAVAHIAAGCDPESVLLLTGSARLSVQVRASITSALLGAG 78 Query: 78 TTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDG 137 GRAAVREPLVR+VHSYA+ VLR AA+R G PPRL+TSAEQD IIRELLAGD+EDG Sbjct: 79 ----GRAAVREPLVRTVHSYAFGVLRLAAQRNGSPPPRLITSAEQDGIIRELLAGDVEDG 134 Query: 138 PSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFA 197 P++ WP L PAL+T GFATELR+L+ARC+ERG+DP+ L+R+GR +GRPEW AAGRFA Sbjct: 135 PASPVRWPEQLRPALSTVGFATELRDLMARCSERGIDPVALQRIGRHAGRPEWQAAGRFA 194 Query: 198 RQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDA 257 + YEQ+MLLR+AVG A PQAT PALGAAELVG+ALEAFA D VDDA Sbjct: 195 QAYEQIMLLRSAVGMAAPQATVPALGAAELVGAALEAFAMDADLLSAERSRVQLLLVDDA 254 Query: 258 QQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTMSHR 317 Q LDPQAARLVEVLAAGAE +IAGDP+Q VF A+ L SHR Sbjct: 255 QHLDPQAARLVEVLAAGAELTVIAGDPHQTVFGYRGADPALLRGDGP----ALILNRSHR 310 Query: 318 CAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXXXXV 377 CA +A A++ I RRLPG A R G E G++ V V Sbjct: 311 CAAPLADAIAAITRRLPGADASREFTGRA-EQGTLAVRIAASPHAESALIADALRRAHLV 369 Query: 378 DGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXXXXX 437 DGVPW +MAVI P LA +P Sbjct: 370 DGVPWDRMAVIVRSVPRTGASLGRALAAAGVPVEDPHPDVPLANQPAVQALLTVLEATAE 429 Query: 438 XXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVATLSEDGRPAVGS 497 + ++ALAL+TGPIGRVDPV V FG+LLV L D Sbjct: 430 KLDGERALALVTGPIGRVDPVSLRQLRRTLRRGVTAPD-RGFGELLVEALERDVAAL--- 485 Query: 498 AGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGGP 557 P G DPR LW AW+RSGLQ RWLAA +RGGP Sbjct: 486 ------PDEHARALRRLRAVLTSARRSAEQGGDPRQTLWQAWNRSGLQKRWLAAAERGGP 539 Query: 558 AGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVAQNEQVRVL 617 A QA R+L+AVTALFD+ +QYV RT+GASL GL++H+ L LP + + V ++ Sbjct: 540 AAAQAERDLDAVTALFDVAEQYVERTAGASLRGLIDHITGLSLPPARGD-ARSGDAVALI 598 Query: 618 SAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVSG---NXXXXXXXXX 674 SAHAAL EWD VV+AGLQ+GLWPN PRGGVLATQ L+D +DGV+ Sbjct: 599 SAHAALSGEWDFVVLAGLQEGLWPNVSPRGGVLATQHLVDVIDGVAAPGQRLSSRAPLLA 658 Query: 675 XXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXX 734 VTAVD D+ G +AALPS F E+A A Sbjct: 659 EERRLLIAAMGRARSRVLVTAVDSDS---GDEAALPSPFCHELAAMATEPVPEPALPIRA 715 Query: 735 XXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVS 794 D +D R CAA QLARLA AGV GADP+ W+G +S Sbjct: 716 PRVLSPAAVVGRLRSVVCAGSDEVSED-ERVCAAAQLARLATAGVHGADPSSWYGARELS 774 Query: 795 TTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGSVLHALIAEPGA 853 + L+ D VVTL+PSTLQ L DCPLRWL ERHGG RD+R+T+GS++HAL++E G Sbjct: 775 SDEPLWDGDDHVVTLSPSTLQMLADCPLRWLLERHGGARGRDVRSTLGSLVHALVSESGT 834 Query: 854 SEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDG 913 +E LL EL +VW LPF+A W S NE RH M+ F++WR TR ELTEVG EID+DG Sbjct: 835 AESVLLDELDKVWGKLPFDAQWHSDNERIRHLEMLATFLKWRSDTRGELTEVGTEIDVDG 894 Query: 914 VLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXX 973 V+ DG +R+RGR+DRLERD GRLV+VD+KT K+PVSKDDAQ +AQLAMYQL Sbjct: 895 VVAGGEGDGPGVRVRGRLDRLERDSEGRLVVVDVKTGKSPVSKDDAQAHAQLAMYQLAVA 954 Query: 974 XXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIA 1033 RLVY GK+ A +R QD +TP R+ W V +AA A GP F+A Sbjct: 955 AGLIADGDEPGGGRLVYLGKTTGGRATERHQDAVTPEVRELWEARVHEAAAATQGPSFVA 1014 Query: 1034 RRNDGCSHCPIRPSCPAHTDRS 1055 R NDGC+HCP+R +CPA RS Sbjct: 1015 RVNDGCAHCPVRATCPAQNSRS 1036 >tr|B1MEY6|B1MEY6_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-dependent DNA helicase;[Mycobacterium abscessus] Length = 1058 Score = 713 bits (1840), Expect = 0.0 Identities = 430/1057 (40%), Positives = 550/1057 (52%), Gaps = 24/1057 (2%) Query: 5 WGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMW 64 W A LL P G V+GG GTGK++LLV +P SVL+LTGS R Sbjct: 11 WDGAAACLLDPDRTGRFVVVGGSGTGKTSLLVDIVAAHTAAGVNPASVLVLTGSNRASAE 70 Query: 65 ARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDA 124 R+ ++ A+ A+REP+VR+VHSYA+AVL A G+ PPRL+T+AEQD+ Sbjct: 71 LRNRISAAVFER----CAGVAIREPMVRTVHSYAFAVLAAHAACQGNPPPRLITAAEQDS 126 Query: 125 IIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRR 184 I+RELL G+ ED + WP L PAL TAGFAT +R+L+ARC ERGVD EL +GRR Sbjct: 127 IVRELLCGNAEDNSGS---WPASLRPALATAGFATGVRDLMARCTERGVDARELRAIGRR 183 Query: 185 SGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXX 244 RPEW A AR+YE+VMLLR+AVG A PQAT PALGAAELVGSALE FA +P Sbjct: 184 HNRPEWIAVAGLAREYEEVMLLRSAVGMAAPQATVPALGAAELVGSALETFAVEPGMLAA 243 Query: 245 XXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXX 304 VDDAQ LDPQAA LV +LA A F +IAGDPNQ VF Sbjct: 244 ERDRIELLLVDDAQHLDPQAALLVRLLAERAGFCVIAGDPNQTVFGFRGADTQLLQVSAD 303 Query: 305 XXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXX 364 + L SHRCA +A + +ARRLPG S R I G +V + Sbjct: 304 SRTTMIELDGSHRCAAPIAELANSVARRLPGSSPARVIHGVENGPAAVRLAAVPTETAEA 363 Query: 365 XXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPX 424 +DGVPWS+MAVI G +A P Sbjct: 364 SLVVDLLRRSHLIDGVPWSRMAVIVRSVPRSGAALCRALQSAGVPVHAESYDGPVASVPA 423 Query: 425 XXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXA-VAGRSPEDFGDLL 483 + A+ L TGP+GRVDPV A A +LL Sbjct: 424 VHALLLAVSAAQGGVTHEDAVTLATGPLGRVDPVALRRLRRQLLRAEEAAGGERGSAELL 483 Query: 484 VATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSG 543 A L E + + Q P +G +LWAAW RSG Sbjct: 484 RAVLVEADETHLAALTDIQA-----APLRRVRAVIGAAREATASGASVLDVLWAAWTRSG 538 Query: 544 LQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRV 603 LQ RW RGGP G QA R+L+AV++LFD+ ++V+RT G ++GL++H+ +L L V Sbjct: 539 LQRRWDGLSQRGGPLGAQADRDLDAVSSLFDLASEHVARTPGIGVTGLIDHIRSLAL--V 596 Query: 604 SEEPV-AQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGV 662 + + + V ++SAHAA+G EWD+V I G+Q+GLWPNT RGGVL TQ L+D L G+ Sbjct: 597 GQRTTRLEPDAVAIVSAHAAVGREWDVVAIPGVQEGLWPNTAVRGGVLRTQELMDVLAGI 656 Query: 663 --SGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW 720 + + +TAV+ + + G A+ S F E+ Sbjct: 657 EHAAHVDGSAVALAEERRLLLLAVGRAARRVLITAVENENADMGGGPAMASRFLTELMAA 716 Query: 721 ANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVA 780 P AV DA R+ AA QLARLA AGV Sbjct: 717 HPEWVISEYRPGAAQSRVLTAANLVGELRAVVTAPVEAVTDARRRAAARQLARLAAAGVP 776 Query: 781 GADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRAT 839 GADP W+GL VS L+ A D V ++PS ++TL CPLRW+ ERHGGT+ D R Sbjct: 777 GADPESWYGLGDVSDERPLWLAEDGPVRVSPSNVETLMACPLRWMLERHGGTDLTDPRRA 836 Query: 840 IGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTR 899 +G+++H L+ + + L + W+ +PFE+ W++ NEL RH +++AF WR TR Sbjct: 837 LGTLVHELVGVHAEDSDAMCRALDKAWESMPFESQWYARNELRRHHELLEAFTTWRASTR 896 Query: 900 SELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDA 959 ELTEVG EI +DGVL A +RL GR+DRLERD GR V++DIKT K+P +KDDA Sbjct: 897 GELTEVGREIGVDGVLSRAGQP--QVRLVGRIDRLERDAEGRPVVIDIKTGKSPATKDDA 954 Query: 960 QQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGK-SAAAGAAQRDQDPLTPAARDQWR 1016 QQ+AQLA YQ+ RLVY K + GA QR QDPLTPAA+D WR Sbjct: 955 QQHAQLAAYQVAAAEGLIEGEPAGAPGGGRLVYIAKPNLDDGATQRHQDPLTPAAQDAWR 1014 Query: 1017 NLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 + AA + GP F+AR NDGC HCP+R CPA TD Sbjct: 1015 ESIHNAAASTQGPIFVARVNDGCGHCPLRTCCPAQTD 1051 >tr|C1B1I9|C1B1I9_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-dependent DNA helicase; EC=3.6.1.-;[Rhodococcus opacus] Length = 1108 Score = 619 bits (1595), Expect = e-175 Identities = 407/1073 (37%), Positives = 524/1073 (48%), Gaps = 35/1073 (3%) Query: 5 WGAEARELLTPGSRGLV----RVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 W R +LT G+ +VLGGPGTGK++LLV DPESVL+LT S R Sbjct: 40 WDDSTRRVLTAPPLGVGWNPWQVLGGPGTGKTSLLVDVAVDRIAGGEDPESVLVLTQSKR 99 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 R +T AL+ H G A REPLVR+VHSYA+AVLR A G+ PPRL+T A Sbjct: 100 AAGRVREEVTAALI-GHDEHHGPRATREPLVRTVHSYAFAVLRLQAAAHGNPPPRLITGA 158 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDA++RE+L GD+ DG WP L PAL GFA ELR+L+ R +ERG+ P +L Sbjct: 159 EQDAVLREMLQGDIADGGEM---WPERLRPALPLGGFAVELRDLMLRSSERGLGPEDLIE 215 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LGRR R EW AAG FA +YE MLLR AVG P+ATAPAL AAEL+G+AL AFA+DP Sbjct: 216 LGRRHDRTEWVAAGMFAARYEHGMLLRGAVGVEAPEATAPALDAAELIGAALTAFATDPD 275 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-XXXXXXXXXX 299 VDDAQ LDPQAA LV ++ G ++AGDP+Q+++ Sbjct: 276 LLRAERDRVRHLLVDDAQHLDPQAAELVRLVGTGTRTTVVAGDPDQSIYGFRGADPTFLA 335 Query: 300 XXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXX 359 V L ++ R + VA + I RLPG R I + G + Sbjct: 336 HLADKGDPRQVLLPVNFRSSADVATTAARITSRLPGHLPHR-IWTPAQDGGRTSARVLGT 394 Query: 360 XXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSL 419 +DGVPWS+MAVI + L Sbjct: 395 AAKEAALIADTLRRAHLLDGVPWSEMAVIVRSVPRALAPLRRALLGAGVPVTTAASELPL 454 Query: 420 A-EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXA-VAGRSPE 477 A + + ALAL+ GP+G +PV A +A Sbjct: 455 ARQHGVSGLMLVLRALSGQEFTGEDALALLAGPVGGAEPVALRRLRRGLRRAELASGGDR 514 Query: 478 DFGDLL-VATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILW 536 D +LL + + E G +A R +D +LW Sbjct: 515 DSAELLRLLLVGETGSTRRVTAKLTDVEAASLNRVLSVLRKARVPLERGRGIED---VLW 571 Query: 537 AAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVA 596 AAW +GL+ RW AA RGGP G QA R+L+AV ALFD YV R A L+G ++++ Sbjct: 572 AAWQATGLERRWSAASARGGPIGAQADRDLDAVVALFDAAASYVDRLPRAQLAGFVDYLT 631 Query: 597 ALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLL 656 +P V + V VLSAHAA G EWD+V +AG+Q+GLWP+ RG +L T+ L+ Sbjct: 632 GQAIPTARTVSVVPRDAVSVLSAHAAAGREWDVVAVAGVQEGLWPSLRARGSLLGTEALI 691 Query: 657 DELDGVS-------GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAAL 709 D GVS VTAVD S G + Sbjct: 692 DLTSGVSDGSETAADRMSRTAPLLAEERRLFLVACSRARRSLLVTAVD---SASGDADLV 748 Query: 710 PSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDD---AARQC 766 S F E+ D V D A ++ Sbjct: 749 HSRFVDELLAGEQDSDAEEAALPAVDPATRVLALPALVAELRSVVCDPDVADSDPARQER 808 Query: 767 AATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLA 825 AA QLARLA+AGV GA P W+G ST AL+ A D V+L+PST+ LN CPLRWL Sbjct: 809 AARQLARLAEAGVRGAHPDQWYGTAEPSTGVALWNAEDGPVSLSPSTVDLLNTCPLRWLL 868 Query: 826 ERHGGTNPRDLRATIGSVLHALIAEPGA--SEEQLLAELARVWKLLPFEADWFSSNELAR 883 ERHGG + + A G+++H L+ +Q+ L W+ + + W+S EL R Sbjct: 869 ERHGGRDGDNTHAIAGTLVHTLVQALAGRIPADQVERALENAWESIDLGSQWYSRRELDR 928 Query: 884 HRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLV 943 R M+ F W G TRSELTEVGVE+ +DGVL+ + IRLRGR+DRLERD GR V Sbjct: 929 TRDMLATFTAWLGNTRSELTEVGVEVAVDGVLEPREEGSPTIRLRGRIDRLERDAEGRPV 988 Query: 944 IVDIKTAKTPVSKDDAQQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGK-SAAAGAA 1000 IVD+KTA++PV+KD+AQQ+AQLA YQ+ RLV+ K GA Sbjct: 989 IVDVKTARSPVTKDNAQQHAQLAAYQVAAAIGAIDGEPASKPGGARLVFVAKPHQKEGAT 1048 Query: 1001 QRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 QR Q PL+ A + W ++ AA A GP F+AR NDGC HCP+R SCPAH + Sbjct: 1049 QRVQAPLSEEALESWLAVIHAAAAATKGPEFLARVNDGCRHCPVRTSCPAHDE 1101 >tr|Q0S2T4|Q0S2T4_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-dependent DNA helicase;[Rhodococcus sp.] Length = 1098 Score = 612 bits (1578), Expect = e-173 Identities = 407/1074 (37%), Positives = 523/1074 (48%), Gaps = 37/1074 (3%) Query: 5 WGAEARELLTPGSRGLV----RVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGR 60 W +++LT GL +VLGGPGTGK++LLV DPESVL+LT S R Sbjct: 30 WDDATQQVLTAPPLGLGWNPWQVLGGPGTGKTSLLVDVAVDRIAGGEDPESVLVLTQSKR 89 Query: 61 MGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSA 120 R +T AL+ H G A REPLVR+VHSYA+AVLR A G+ PPRL+T A Sbjct: 90 AAGRVREEVTAALI-GHDEHHGPRATREPLVRTVHSYAFAVLRLQAAAHGNPPPRLITGA 148 Query: 121 EQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELER 180 EQDA++RE+L GD+ DG WP L PAL GFA ELR+L+ R +ERG+ P +L R Sbjct: 149 EQDAVLREMLHGDIADGGEM---WPERLRPALALGGFAVELRDLMLRSSERGLGPEDLIR 205 Query: 181 LGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPX 240 LG+R RPEW AAG FA +YE MLLR AVG P+ATAPAL AAEL+G+AL AFA+DP Sbjct: 206 LGQRHSRPEWVAAGMFAARYEHGMLLRGAVGVEAPEATAPALDAAELIGAALTAFATDPD 265 Query: 241 XXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-XXXXXXXXXX 299 VDDAQ LDPQAA LV +L G ++AGDP+Q+++ Sbjct: 266 LLRTERARVRHLLVDDAQHLDPQAAELVRLLGTGTRTTVVAGDPDQSIYGFRGADPTFLA 325 Query: 300 XXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVT-VXXXX 358 V L ++ R + VA + I RLPG H + +DG T V Sbjct: 326 DLADKGDPRQVLLPVNFRSSAEVATTAARITSRLPGHLP--HRSWSPAQDGGRTSVRVLS 383 Query: 359 XXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGS 418 +DGVPWS+MAVI + Sbjct: 384 TVAKEAALVADTLRRAHLLDGVPWSEMAVIVRSVPRALAPLRRALLGAGVPVTTAASELP 443 Query: 419 LA-EEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXA-VAGRSP 476 LA + + ALAL+ GP+G +PV A +A Sbjct: 444 LARQHGVSGLMLVLRALSGQEFTGEDALALLAGPVGGAEPVALRRLRRGLRRAELASGGD 503 Query: 477 EDFGDLL-VATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYIL 535 D +LL + + E +A R +D +L Sbjct: 504 RDSAELLRLVLVGETDSTRRVTAKLTDVEAASLNRVLSVLRKAKVPLDRGRGIED---VL 560 Query: 536 WAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHV 595 WAAW +GL+ RW A RGGP G QA R+L+AV ALFD YV R A L+G ++++ Sbjct: 561 WAAWQATGLERRWSAVSARGGPIGAQADRDLDAVVALFDAAASYVDRLPRAQLAGFVDYL 620 Query: 596 AALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRL 655 +P + V VLSAH+A G EWD+V +AG+Q+GLWP+ RG +L T+ L Sbjct: 621 TGQAIPTTRNVSAVPVDAVSVLSAHSAAGREWDVVAVAGVQEGLWPSLRARGSLLGTEAL 680 Query: 656 LDELDGVSGN-------XXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAA 708 +D GVS VTAVD S G Sbjct: 681 IDLTAGVSDGSETAADWMSRTAPLLAEERRLFLVACSRARRSLLVTAVD---SASGDADL 737 Query: 709 LPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDA--ARQC 766 + S F E+ D V ++ ARQ Sbjct: 738 VHSRFVDELLSGDQDSDVVEAVVQAEDPATRVLALPALVAELRSVVCDPDVAESDPARQE 797 Query: 767 AAT-QLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWL 824 A QLARLA AGV GA P W+G ST AL+ D V+L+PST+ LN CPLRWL Sbjct: 798 RAARQLARLADAGVRGAHPDQWYGTAEPSTGVALWNEEDGPVSLSPSTIDLLNTCPLRWL 857 Query: 825 AERHGGTNPRDLRATIGSVLHALIAEPGA--SEEQLLAELARVWKLLPFEADWFSSNELA 882 ERHGGT+ + A G+++H L+ +Q+ L W + + W+S EL Sbjct: 858 LERHGGTDGDNTHAIAGTLVHTLVQALAGRIPPDQVARALENAWDSIDLGSQWYSRRELD 917 Query: 883 RHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRL 942 R R M+ F W G TRSELTEVGVE+ +DGVL+ + IRLRGR+DRLERD GR Sbjct: 918 RTRDMLATFTAWLGNTRSELTEVGVEVAVDGVLEPREEGSPTIRLRGRIDRLERDAEGRP 977 Query: 943 VIVDIKTAKTPVSKDDAQQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGK-SAAAGA 999 VIVD+KTA++PV+KDDAQQ+AQLA YQ+ RLV+ K GA Sbjct: 978 VIVDVKTARSPVTKDDAQQHAQLAAYQVAAAVGAIDGEPASKPGGARLVFVAKPHRKEGA 1037 Query: 1000 AQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 QR Q PL+ + W ++ AA A GP F+AR NDGC HCP+R SCPAH + Sbjct: 1038 TQRVQAPLSDEDLETWLAVIHAAAAATKGPEFLARVNDGCRHCPVRTSCPAHDE 1091 >tr|C0ZX41|C0ZX41_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-dependent DNA helicase; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 1103 Score = 602 bits (1552), Expect = e-170 Identities = 392/1058 (37%), Positives = 520/1058 (49%), Gaps = 34/1058 (3%) Query: 22 RVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHTTGT 81 +VLG PGTGK++LLV DPESVL+LT S R R +T LL + Sbjct: 48 QVLGSPGTGKTSLLVDLAVQKISGGEDPESVLVLTQSRRAATQVREQITAGLL-GYEQER 106 Query: 82 GRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSAR 141 G A REPLVR+VHSYA+AVLR A G+APPRL+T AEQD+++RE+L GD+EDG Sbjct: 107 GPQATREPLVRTVHSYAFAVLRLQAAAHGNAPPRLITGAEQDSVLREMLRGDIEDGALR- 165 Query: 142 SAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQYE 201 WP L PAL GFA ELR+L+ R ERG+ P +L +LG++ GRPEW AAGRFA YE Sbjct: 166 --WPERLRPALGLNGFAVELRDLMLRANERGLGPEDLVKLGKKRGRPEWVAAGRFAEAYE 223 Query: 202 QVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQQLD 261 Q +LLR +VG P+ATAPAL AAEL+G+AL AFA+DP VDDAQ LD Sbjct: 224 QGVLLRGSVGVEAPEATAPALDAAELIGAALTAFATDPELLRSERARIRHLLVDDAQHLD 283 Query: 262 PQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-VTLTMSHRCAP 320 PQAA+LV ++ G +IAGDP+Q+VF + L +++R Sbjct: 284 PQAAQLVRLIGTGTAGTVIAGDPDQSVFGFRGADSAFLLGLAERGDERQIVLPVTYRNNA 343 Query: 321 AVARAVSGIARRLPGGSAGRHI---DGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXXXXV 377 VA + IA RLPG A R D T G +V + Sbjct: 344 DVASIAAKIAARLPGNLAHRIAVPSDLTDENPGRASVRVLGTTAKEAAVVADTLRRAHLL 403 Query: 378 DGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXXXXX 437 DG+ WS MAVI + LA + Sbjct: 404 DGIAWSDMAVIVRSVPRTLAPLRRALLAAGVPVTTAATELPLARQHGVSGLLLVLRALGG 463 Query: 438 XX-NADQALALITGPIGRVDPVXXXXXXXXXXXA-VAGRSPEDFGDLLVATLSEDGRPAV 495 D ALAL+ GPIG +PV +A S D +LL L ++ R A Sbjct: 464 DQFTGDDALALMAGPIGGAEPVTLRRLRRGLRRVELASGSDRDSSELLRLILIDEDR-AQ 522 Query: 496 GSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRG 555 + + G +LWAAW +GL+ RW AA RG Sbjct: 523 SKRLMGKLTDVEAAALNRVLSVLRKARVPLERGLGVEEVLWAAWQATGLERRWAAASARG 582 Query: 556 GPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEE-PVAQNEQV 614 GP G QA R+L+AV ALFD YV R + LSG ++++ + ++P S V + V Sbjct: 583 GPIGSQADRDLDAVVALFDAAANYVDRLPRSQLSGFVDYLTSQEIPTDSRSRSVIAPDAV 642 Query: 615 RVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDEL-------DGVSGNXX 667 V+SAHAA G EW +V +AG+Q+GLWP+ RG +L T+ L+D + D + Sbjct: 643 TVVSAHAAAGREWAVVAVAGVQEGLWPSLRARGSLLRTEALIDLVNGVSDGSDSAAERLS 702 Query: 668 XXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQW------A 721 +TAV+ S G +PS F E+ + Sbjct: 703 RTAPLLAEERRLFLVACSRARRRLLITAVE---SASGDTDLVPSRFVDELIRGDAYSDDP 759 Query: 722 NGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAG 781 + D D AA QLARLA AGV G Sbjct: 760 SSDLDVVAPETGDTRVLSLPALVAQLRSVVCDPDIAHFDPEKHSRAARQLARLAAAGVRG 819 Query: 782 ADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 A P W+G ST A ++ D V+L+PST++ L CPLRW+ ERHGG++ + A Sbjct: 820 AHPDQWYGTAEPSTAAPMWQPEDGPVSLSPSTIELLETCPLRWVFERHGGSDGDNTHAIA 879 Query: 841 GSVLHALIAEPGAS--EEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQT 898 G+++H L+ +Q+ L W+ + + W+S EL R R M+ F W T Sbjct: 880 GTLVHTLVQALAGRIPPDQVEKALENAWESIDLGSQWYSRRELNRTREMLATFTAWMNAT 939 Query: 899 RSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDD 958 R ELTEVGVE+ ++GVL+ + A++LRGR+DRLERD GR V+VD+KTA+ PVS + Sbjct: 940 RGELTEVGVEVAVEGVLEPREEGAPAVKLRGRIDRLERDTQGRPVVVDVKTARNPVSNEA 999 Query: 959 AQQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGKS-AAAGAAQRDQDPLTPAARDQW 1015 AQ +AQLA YQ+ RLV+ KS GAAQR Q PLT A + W Sbjct: 1000 AQSHAQLAAYQVAAAEGAIAGEPATQPGGARLVFVAKSNKKDGAAQRVQPPLTAEAVEMW 1059 Query: 1016 RNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 R+++ AA A GP ++AR NDGC HCP+R SCPAH + Sbjct: 1060 RDVIHNAAAATQGPQYLARVNDGCRHCPVRSSCPAHDE 1097 >tr|C3JKU2|C3JKU2_RHOER Tax_Id=596309 SubName: Full=UvrD/REP helicase domain protein; EC=3.6.1.-;[Rhodococcus erythropolis SK121] Length = 1120 Score = 602 bits (1551), Expect = e-169 Identities = 393/1058 (37%), Positives = 520/1058 (49%), Gaps = 34/1058 (3%) Query: 22 RVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHTTGT 81 +VLG PGTGK++LLV DPESVL+LT S R R +T LL + Sbjct: 65 QVLGSPGTGKTSLLVDLAVQKISGGEDPESVLVLTQSRRAATQVREQITAGLL-GYEQER 123 Query: 82 GRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSAR 141 G A REPLVR+VHSYA+AVLR A G+APPRL+T AEQD+++RE+L GD+EDG Sbjct: 124 GPQATREPLVRTVHSYAFAVLRLQAAAHGNAPPRLITGAEQDSVLREMLRGDIEDGALR- 182 Query: 142 SAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQYE 201 WP L PAL GFA ELR+L+ R ERG+ P +L +LG++ GRPEW AAGRFA YE Sbjct: 183 --WPERLRPALGLNGFAVELRDLMLRANERGLGPEDLVKLGKKRGRPEWVAAGRFAEAYE 240 Query: 202 QVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQQLD 261 Q +LLR +VG P+ATAPAL AAEL+G+AL AFA+DP VDDAQ LD Sbjct: 241 QGVLLRGSVGVEAPEATAPALDAAELIGAALTAFATDPELLRSERARIRYLLVDDAQHLD 300 Query: 262 PQAARLVEVLAAGAEFALIAGDPNQAVF-XXXXXXXXXXXXXXXXXXXAVTLTMSHRCAP 320 PQAA+LV ++ +IAGDP+Q+VF + L + R Sbjct: 301 PQAAQLVRLIGTATAGTVIAGDPDQSVFGFRGADSAFLLGLAERGDERQIVLPTTFRNNA 360 Query: 321 AVARAVSGIARRLPGGSAGR---HIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXXXXV 377 VA + IA RLPG A R D T + G +V + Sbjct: 361 DVASIAAKIAARLPGNLAHRIAVPSDLTDEDPGRASVRVLGTTAKEAAVVADTLRRAHLL 420 Query: 378 DGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLA-EEPXXXXXXXXXXXXX 436 DG+ WS MAVI + LA + Sbjct: 421 DGIAWSDMAVIVRSVPRTLAPLRRALLAAGVPVTTAATELPLARQHGVSGLLLVLRALGG 480 Query: 437 XXXNADQALALITGPIGRVDPVXXXXXXXXXXXA-VAGRSPEDFGDLLVATLSEDGRPAV 495 D ALAL+ GPIG +PV +A S D +LL L ++ R A Sbjct: 481 DQFTGDDALALMAGPIGGAEPVTLRRLRRGLRRVELASGSDRDSSELLRLILIDEDR-AQ 539 Query: 496 GSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRG 555 + + G +LWAAW +GL+ RW AA RG Sbjct: 540 SKRLMGKLTDVEAAALNRVLSVLRKARVPLERGLGVEEVLWAAWQATGLERRWAAASARG 599 Query: 556 GPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVS-EEPVAQNEQV 614 GP G QA R+L+AV ALFD YV R + L+G ++++ + ++P S V + V Sbjct: 600 GPIGSQADRDLDAVVALFDAAANYVDRLPRSQLAGFVDYLTSQEIPTDSRSRSVITPDAV 659 Query: 615 RVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVSG-------NXX 667 V+SAHAA G EW +V +AG+Q+GLWP+ RG +L T+ L+D ++GVS Sbjct: 660 TVVSAHAAAGREWAVVAVAGVQEGLWPSLRARGSLLRTEALIDLVNGVSDGSDSAAERLS 719 Query: 668 XXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEI------AQWA 721 +TAV+ S G +PS F E+ A Sbjct: 720 RTAPLLAEERRLFLVACSRARRRLLITAVE---SASGDTDLVPSRFVDELIRGDVYADDP 776 Query: 722 NGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAG 781 + D D AA QLARLA AGV G Sbjct: 777 SSDLDVVAPETGDTRVLSLPALVAQLRSVVCDPDIAHFDPEKHSRAARQLARLAAAGVRG 836 Query: 782 ADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATI 840 A P W+G ST A ++ D V+L+PST++ L CPLRW+ ERHGG++ + A Sbjct: 837 AHPDQWYGTAEPSTAAPMWQPEDGPVSLSPSTIELLETCPLRWVFERHGGSDGDNTHAIA 896 Query: 841 GSVLHALIAEPGA--SEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQT 898 G+++H L+ +Q+ L W+ + + W+S EL R R M+ F W T Sbjct: 897 GTLVHTLVQALAGRIPPDQVEKALENAWESIDLGSQWYSRRELNRTREMLATFTAWMNAT 956 Query: 899 RSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDD 958 R ELTEVGVE+ ++GVL+ + A++LRGR+DRLERD GR V+VD+KTA+ PVS + Sbjct: 957 RGELTEVGVEVAVEGVLEPREEGAPAVKLRGRIDRLERDTEGRPVVVDVKTARNPVSNEA 1016 Query: 959 AQQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGKS-AAAGAAQRDQDPLTPAARDQW 1015 AQ +AQLA YQ+ RLV+ KS GAAQR Q PLT A + W Sbjct: 1017 AQSHAQLAAYQVAAAEGAIAGEPATQPGGARLVFVAKSNKKDGAAQRVQPPLTAEAVEMW 1076 Query: 1016 RNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 R+++ AA A GP ++AR NDGC HCP+R SCPAH + Sbjct: 1077 RDVIHNAAAATQGPQYLARVNDGCRHCPVRSSCPAHDE 1114 >tr|D0LEA2|D0LEA2_GORB4 Tax_Id=526226 SubName: Full=UvrD/REP helicase; Flags: Precursor;[Gordonia bronchialis] Length = 1129 Score = 573 bits (1478), Expect = e-161 Identities = 396/1072 (36%), Positives = 511/1072 (47%), Gaps = 51/1072 (4%) Query: 21 VRVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGMWARSSLTTALLRSHTT 79 +R+ GGPG+GK+AL+V +PESVL+L S + R +T +L Sbjct: 57 IRIHGGPGSGKTALIVDAAVARLRAPDVEPESVLVLASSRQAAATLREEITRRVLAGSDA 116 Query: 80 GTGR----AAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLE 135 GR A+REPLVR+VHSYA+A+LR A + PPRL+T +EQD ++RELLAGD+E Sbjct: 117 TDGRRALGGALREPLVRTVHSYAFAILRLQASAHNNPPPRLITGSEQDVVLRELLAGDIE 176 Query: 136 DGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGR 195 DG WP HL PAL T GFA LR+L+ R AERG P EL LGRR RPEW AA R Sbjct: 177 DGAGY---WPAHLRPALGTDGFAQALRDLMMRAAERGAGPEELAALGRRHRRPEWVAAAR 233 Query: 196 FARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVD 255 QYEQ MLLR AVG P A+APA+ AAELVGSAL AFA+DP VD Sbjct: 234 AYAQYEQNMLLRGAVGLEAPGASAPAVDAAELVGSALSAFATDPELLIAQRARIRHLLVD 293 Query: 256 DAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-VTLTM 314 DAQ LDPQAA+LV+++ G LIA D +Q+VF + L Sbjct: 294 DAQHLDPQAAQLVKLIGTGTTSTLIAADTDQSVFGFRGADPRFADDLAEPGSDRDILLDT 353 Query: 315 SHRCAPAVARAVSGIARRLPGGSAGRH----IDGTGTEDGSVTVXXXXXXXXXXXXXXXX 370 + R + R +A RLPG + + T G V V Sbjct: 354 NFRSEAQIERVGRVLASRLPGARPHPYPQAPAESPATGAGGVQVRVFGSSAKEATAVADL 413 Query: 371 XXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEE-------- 422 DGVPWS+MAVI + P G L + Sbjct: 414 LRRAHLFDGVPWSRMAVIVRSVSLALPPLRRAFRSAGVPLTTPASGLPLHRQRAVVALML 473 Query: 423 PXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDF-GD 481 + + A AL++GPIG DP + R + D Sbjct: 474 VLRVVAARTTPAQADDFDIEDAAALLSGPIGAADPGAMRRLRRGVRRSSEKRGDDGAQQD 533 Query: 482 LLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHR 541 L A S P + + + P H AG+ LWA W Sbjct: 534 SLTALRSAILDPLLAARYREDLTDAERAPLDRVLDVVAAAEKVHTAGRGLEETLWAGWQA 593 Query: 542 SGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLP 601 +GL+ RW A+ RGGP G QA R+L+AV A+F+ + A +G + ++ LQ+P Sbjct: 594 TGLERRWAASAVRGGPGGEQADRDLDAVMAMFEAAANFADTLPAAGPAGFVHYLGQLQIP 653 Query: 602 RVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDG 661 R S A ++ V VLSAHAA+G EWD+V +AG+ DGLWP+ RG VLAT +L+D LDG Sbjct: 654 RDSRTATAASDSVTVLSAHAAVGREWDVVAVAGVLDGLWPSLRSRGSVLATGQLVDLLDG 713 Query: 662 VS----GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEI 717 V VTAV+ G G+ A PS F EI Sbjct: 714 VDPDAVDKLARPAAAIADERRLLLVACTRARRRLLVTAVE---DGSGE--ASPSRFIGEI 768 Query: 718 A-------QWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGA--VDDAARQCAA 768 A Q A+ D G + D AA Sbjct: 769 ADALAGSTQDADADTPAPEELPLDPGVDRVLSLPSLVATLRSVVTAGVGEMPDERTMAAA 828 Query: 769 TQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTLNDCPLRWLAER 827 LARLA A V GA P W+GL S+ A L+ D V L+PS + L C LRWL ER Sbjct: 829 RLLARLADADVPGAHPRDWYGLAAPSSDAPLWTPDDGAVVLSPSNVDALTRCSLRWLLER 888 Query: 828 HGGTNPRDLRATIGSVLHALI-AEPGASEEQLLAELAR-VWKLLPFEADWFSSNELARHR 885 +GG + A GS++H L+ A G + + E R +W + A W+S+ EL R Sbjct: 889 NGGRDGDGTPALTGSLVHTLVQAVAGELDPTEVTEALRAIWDRVDTGAGWYSARELERAE 948 Query: 886 AMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIV 945 +M+ F EW +RS+L EVGVE+ +D + A DD A+RLRGR+DRLERDGAGR V+V Sbjct: 949 SMLVNFREWLRISRSDLDEVGVELAVDATIPATPDD-PAVRLRGRMDRLERDGAGRPVVV 1007 Query: 946 DIKTAKTPVSKDDAQQNAQLAMYQL------XXXXXXXXXXXXXXXXRLVY-PGKSAAAG 998 D+KTAKTP+SK DAQ +AQLA YQ+ RLVY + +G Sbjct: 1008 DVKTAKTPISKADAQDHAQLAAYQVALAHGGLTGADDAVVSAEPGGARLVYVSSANRNSG 1067 Query: 999 AAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPA 1050 AA+R Q PL+P D+W +VR AA A+ GP + A N GC HC + SCPA Sbjct: 1068 AAERVQAPLSPELLDEWITVVRHAARASVGPVYAATPNPGCGHCALAASCPA 1119 >tr|C6WM79|C6WM79_ACTMD Tax_Id=446462 SubName: Full=UvrD/REP helicase;[Actinosynnema mirum] Length = 1050 Score = 563 bits (1452), Expect = e-158 Identities = 384/1062 (36%), Positives = 511/1062 (48%), Gaps = 54/1062 (5%) Query: 4 SWGAEARELLT-PGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMG 62 +W A +R +L PG G +RVLGGPGTGK+ L+ + PESVL+LT + R Sbjct: 21 TWDAASRRVLEHPG--GPLRVLGGPGTGKTTLIAETAARRVHAGAAPESVLVLTANRRAA 78 Query: 63 MWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQ 122 R+ LT AL+R G VREPLVR+VHSYA+AVLR A R G+ PPRLL EQ Sbjct: 79 ESLRAHLT-ALIRRTPDGELLPVVREPLVRTVHSYAFAVLRARAVRDGEPPPRLLAGPEQ 137 Query: 123 DAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLG 182 DA++REL+ GD+E G AR WP L PAL GFA ELR+LL R ERG+ P +L LG Sbjct: 138 DAVVRELITGDVEAG--ARD-WPERLRPALALPGFAGELRDLLLRAVERGLAPEDLVALG 194 Query: 183 RRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXX 242 GR EW AAG F QYEQV LL + Q APA AAELV +AL AF +D Sbjct: 195 EGHGRDEWVAAGLFGEQYEQVSLLAS-------QGLAPAYDAAELVDNALLAFENDEELL 247 Query: 243 XXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXX 302 VDDAQ LDP L+ + + A+ L+ GDP+QAVF Sbjct: 248 SGERARVRHVYVDDAQHLDPLQHALIRAVGSAADEFLLFGDPDQAVF---SFRGADPRLL 304 Query: 303 XXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXX 362 V L+ SHR AV A +G+A RLPG S R + G E G+ V Sbjct: 305 VDGDSPQVVLSRSHRLPSAVRAATAGLASRLPGASPAREVSPVG-EGGTTQVRLFASEAQ 363 Query: 363 XXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEE 422 VDGVPWS+MAV+ ++P LA + Sbjct: 364 EASWVADRLRRAHLVDGVPWSRMAVVVRSATRSLPVIQRALLAAGVPVAVPGTDLPLARQ 423 Query: 423 PXXXXXXXXXXXXXXXXNADQ--ALALITGPIGRVDPV-XXXXXXXXXXXAVAGRSPEDF 479 P + D+ A L++ P+G DP+ +A Sbjct: 424 PAVTPLLALLRCAAVPGSLDEDTAAMLLSSPLGGADPLALRRLRRGLRRLEIAAGRDRPS 483 Query: 480 GDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAW 539 G+LLV + + R A + P R G +LW W Sbjct: 484 GELLVEVIEDRDRLAALEDAES-------APARRVARLLRTARDSIRRGSSVEVVLWDLW 536 Query: 540 HRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQ 599 +GLQ+RW+A R G G+QA R+L+AV ALF+ +YV R GAS G +++ A Sbjct: 537 QDTGLQDRWVAMSSRHGTTGMQADRDLDAVVALFETAAKYVDRLPGASPDGFADYLEAQH 596 Query: 600 L---PRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLL 656 + + PV E V VL+AHA+ G EW++V + G+Q+G WP+ RG +L +RL+ Sbjct: 597 IVGDTLAAAAPV--GEAVAVLTAHASAGQEWEVVAVPGVQEGTWPDLRLRGSLLGVERLV 654 Query: 657 DELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFE 716 D + GV V+AV G+ A PS F E Sbjct: 655 DLVSGVGAGASAVAPLLAEERRLLLVATSRARRVLLVSAVRGED-------AQPSRFLDE 707 Query: 717 IAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAK 776 + G+ D + R AATQLARLA Sbjct: 708 LEDAGEGETERRITPPERGLVLAELVGELRRVVC-----DPGESEDRRDRAATQLARLAA 762 Query: 777 AGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRDL 836 GV GA P W+GL PV+T L+ V+++PST++TL+ CP+RW+ ERHGG +P +L Sbjct: 763 DGVPGAHPDTWYGLAPVTTDVPLWTEEHTVSVSPSTVETLSKCPVRWVVERHGGQDPAEL 822 Query: 837 RATIGSVLHAL--IAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEW 894 + G+++HAL A GA E +L +L W + A WFS E R M+ AF+ W Sbjct: 823 ASITGTLVHALAQAAASGAGEAELKEKLDEAWTAVDAGAPWFSRRERMRVERMLDAFLAW 882 Query: 895 RGQTRSELTEVGVEIDIDGVLDAARDDGG-AIRLRGRVDRLERDGAGRLVIVDIKTAKTP 953 +R +LT+V VE +I +D + +GG +++RGRVDRLE D GR V+VDIKTAKTP Sbjct: 883 LSASRGQLTQVSVEEEIS--VDLPKVEGGPRLKVRGRVDRLETDRDGRPVVVDIKTAKTP 940 Query: 954 VSKDDAQQNAQLAMYQL---XXXXXXXXXXXXXXXXRLVYPGK-SAAAGAAQRDQDPLTP 1009 VS+ DAQ++ QLA+YQL L+Y K + GAAQ +Q PL Sbjct: 941 VSRKDAQEHPQLAVYQLASALGGFTHLGLATDPGGAALLYVAKENKKTGAAQLEQTPLDE 1000 Query: 1010 AARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 W V++AA ++ GP + A N C CP R SCP H Sbjct: 1001 QGVRVWLERVQEAAGSSVGPGYRAEENPDCDRCPARTSCPVH 1042 >tr|C7MVN2|C7MVN2_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helicase, superfamily I;[Saccharomonospora viridis] Length = 1066 Score = 563 bits (1450), Expect = e-158 Identities = 386/1058 (36%), Positives = 500/1058 (47%), Gaps = 26/1058 (2%) Query: 4 SWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGM 63 +W AR LL+ RG VRVLG PGTGK+ LL D ESVL+LT S + Sbjct: 12 TWDDGARWLLS-APRGFVRVLGAPGTGKTTLLAATAAARIAEGADEESVLVLTASRQAAD 70 Query: 64 WARSSLTTALLRSHTTGTGRA-AVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQ 122 R+ +T L G VREP+VR+VHSYA+AVLR A R G PRLL+ EQ Sbjct: 71 ALRADITRRLTGHRGERAGEVRTVREPIVRTVHSYAFAVLRLQAVRDGLPVPRLLSGPEQ 130 Query: 123 DAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLG 182 D ++RELLAGDLE G WP L PAL GFA ELR+LL R AERG+ P +L +LG Sbjct: 131 DVVVRELLAGDLERGAPD---WPEPLRPALAVPGFAEELRDLLLRAAERGLGPEDLIKLG 187 Query: 183 RRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXX 242 R GR EW AAGRF RQYE+V LL+ G A ++ APAL AAELV SAL DP Sbjct: 188 HRQGRDEWVAAGRFWRQYEEVTLLQGVGGHAVGESGAPALDAAELVASALVELEGDPELL 247 Query: 243 XXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXX 302 VDDAQ LDP RLV +LA A A++AGDP+Q+VF Sbjct: 248 AGEQARVRHLFVDDAQHLDPLQYRLVRLLAETASDAVLAGDPDQSVFSFRGADPRLFADA 307 Query: 303 XXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTED----GSVTVXXXX 358 V LT SHR P V AV IA LPG SA R T T G V Sbjct: 308 DPDGDRTVVLTRSHRLDPVVHEAVGRIAATLPGTSAHRASVPTPTRGREGRGKVRTRLSP 367 Query: 359 XXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGS 418 +DGVPWSQMAV+ + Sbjct: 368 TPAAEAAWIADQLRRAHLLDGVPWSQMAVLMRSVSRSLPVLQRALTMAGIPVAAVTEELP 427 Query: 419 LAEEP--XXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAVAGRSP 476 LA +P +A+ A L++ P+G DP+ Sbjct: 428 LARQPAVRPLLTVLWAAADPRVLDAETAEMLLSSPLGGADPLALRRLRRGLRRLELVAGG 487 Query: 477 EDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILW 536 E D L+ DG G A + + P R+G +LW Sbjct: 488 ERSSDELLVEALRDGDVLAGLADA------EAAPVRRVSRLLTVAREAMRSGAGVEDVLW 541 Query: 537 AAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVA 596 W SGLQ+R +A +GG G++A R+L+AV ALFD +YV R A + G +E+++ Sbjct: 542 QVWQASGLQDRLVAQAAKGGTLGMRADRDLDAVVALFDAARRYVDRLPKAGVLGFVEYLS 601 Query: 597 ALQLPRVSEEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRL 655 + + S PVA + V +L+AH A+G EW +V I GLQ+G+WP+ RG VL +RL Sbjct: 602 SQHIAGDSLAPVAVRGSGVSLLTAHGAVGREWSVVAILGLQEGMWPDLRLRGSVLGVERL 661 Query: 656 LDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFF 715 +D L GV + T + G +Q PS FFF Sbjct: 662 VDLLSGVDDDAVATVSATAPLLAEERRLFYVAASRARHTLLVSAVQGEDEQ---PSRFFF 718 Query: 716 EIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLA 775 ++ D ++ R+ AA QLARLA Sbjct: 719 DLVDAGVDTERGGGPDVRLVARERGLTLAELVGELRAAVTDTELEPRRRKLAARQLARLA 778 Query: 776 KAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNPRD 835 + GV GA P W+GL S+ L +V+ ++PS + TL CPLRWL ERHGGT+P Sbjct: 779 RDGVPGAHPEQWYGLAGNSSDRPLREPDEVIRVSPSVVDTLVKCPLRWLLERHGGTDPAQ 838 Query: 836 LRATIGSVLHAL--IAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVE 893 L A G+++HAL A G E+ L EL W + A WFS E R M+++F+ Sbjct: 839 LSAVTGTLVHALAQAAAEGTDEQTLWKELDEAWAKVDAGAPWFSRKERVRVEGMVRSFLT 898 Query: 894 WRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTP 953 W Q+R ELT+ VE D+ L A + ++ L GRVDRLE D GR V++D+KT+K+P Sbjct: 899 WLRQSRDELTQHAVEQDMRVSLPEAEGE-PSVALTGRVDRLELDAEGRPVVIDLKTSKSP 957 Query: 954 VSKDDAQQNAQLAMYQL-XXXXXXXXXXXXXXXXRLVYPGK-SAAAGAAQRDQDPLTPAA 1011 V+KD A ++ QLA+YQL RL+Y GK +A GA R+Q L Sbjct: 958 VAKDAAAEHPQLAVYQLATLLGAFSGHKGHTGGARLLYVGKPNAKTGATVREQPALDEET 1017 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 +W N VR+AA GP + R N CS CP R +CP Sbjct: 1018 ARRWLNEVRKAAVDTVGPTYPVRENVDCSRCPSRSACP 1055 >tr|C2ARP8|C2ARP8_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helicase, superfamily I;[Tsukamurella paurometabola DSM 20162] Length = 1094 Score = 510 bits (1314), Expect = e-142 Identities = 359/1077 (33%), Positives = 491/1077 (45%), Gaps = 56/1077 (5%) Query: 5 WGAEARELLTPGSRGLV---------RVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLL 54 WG EL+ P + L R+ GGPGTGK++ L+ +PESVL+ Sbjct: 31 WGGPVAELVAPAAGALALDVGGWAPYRIRGGPGTGKTSALIDIAVAKLTDPFVEPESVLI 90 Query: 55 LTGSGRMGMWARSSLTTALLRSHTTGTGRAAVR---EPLVRSVHSYAYAVLRRAAERTGD 111 LTGS R + R L+ +L GRA V EPLVR+VHS A+AVLR A G Sbjct: 91 LTGSKRSAVALRRELSARVLADR----GRAGVHASGEPLVRTVHSLAFAVLRLQAAHAGA 146 Query: 112 APPRLLTSAEQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAER 171 PPRL+T +EQDA++RELL G ++DG + WP L PAL T GFA LR+L A+ A+R Sbjct: 147 PPPRLITGSEQDAVVRELLRGHVDDGGAF---WPERLRPALVTGGFAGALRDLFAQAAQR 203 Query: 172 GVDPMELERLGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSA 231 G P E++ L R RPEWAAA R+Y+Q LLR +VG A P A APA+ AAEL+ +A Sbjct: 204 GAGPEEIDELAARYDRPEWAAAAAALREYQQTTLLRGSVGLAGPTAVAPAVDAAELIDAA 263 Query: 232 LEAFASDPXXXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXX 291 + A A D VDDAQ LDP A+ L+ +L G E +IAGDP+QA+ Sbjct: 264 VTALAGDDALLAQQRERIRFLLVDDAQNLDPLASALIRLLGTGTELTVIAGDPDQAINSF 323 Query: 292 XXXXXXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGTEDGS 351 + L S R + V+ ++ RLP + GS Sbjct: 324 RGASTRFLQSLDVPAERDIVLERSFRFGEEITATVNRVSSRLPNRFGS--VAPERPRPGS 381 Query: 352 VTVXXXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXS 411 V + GVPW MA++ + Sbjct: 382 AAVRLFSTAAKEADAIAAMLRREHVLGGVPWEDMAIVVRSVSASVAPLRRALAYAGVPVT 441 Query: 412 IPPIGGSLAEEPXXXXXXXXXXXXXXXXNAD--QALALITGPIGRVDPVXXXXXXXXXXX 469 + LA + + D +A+AL++GP+G DP+ Sbjct: 442 VAADDVPLARQRAVHALLSTVRAACEPESLDPAEAVALLSGPVGGGDPL----TLRRVRR 497 Query: 470 AVAGRSPED---FGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHR 526 AV P D ++L A ++ A A + + P Sbjct: 498 AVRRADPSDERGSAEILGAVVAGSVDFAPYRAALTE---LEAEPVERVLAAVHAARAAAV 554 Query: 527 AGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGA 586 G +LWAAW +GL RW A RGG G QA R+L+AV LFD + A Sbjct: 555 EG-TVEEVLWAAWSVTGLSGRWGALALRGGSVGEQADRDLDAVMGLFDAAADFTDTLPTA 613 Query: 587 SLSGLLEHVAALQLPRVS-----EEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWP 641 S + +E++ L +PR S E P V V+SAH A G EWD+V +AG+Q+G WP Sbjct: 614 SPARFIEYIEQLHIPRASGGGRRETPTTPG--VTVVSAHGAAGREWDVVAVAGVQEGRWP 671 Query: 642 NTIPRGGVLATQRLLDELDGVS----GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVD 697 N RGG+L T+ LLD LDG+ +TAVD Sbjct: 672 NLRRRGGLLGTEELLDALDGIDPAALPTVSRSLPLLAEERRLLLVACSRARRTLLITAVD 731 Query: 698 GDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDG 757 + G +PS F IA D D Sbjct: 732 ---TADGDGDLVPSRFLQGIAPSGEEDPETYTPAVESEPAASLDLRTLVATLRAAAC-DP 787 Query: 758 AVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD-VVTLTPSTLQTL 816 +++ R AA QLARLA V GA P W+GL ST L+ D V L+PS ++ L Sbjct: 788 RREESERAHAARQLARLAADRVPGAHPDSWYGLAGASTDDPLWQPDDGPVALSPSNVEAL 847 Query: 817 NDCPLRWLAERHGGTNPRDLRATIGSVLHALIAEPGA--SEEQLLAELARVWKLLPFEAD 874 + C LRW+ ER GG++ + G+++H L+ ++++ L +VW + EAD Sbjct: 848 SACALRWMLERFGGSDGDSAKQATGNLVHTLVQAVAGRIPKDEVTRSLEKVWDRVDLEAD 907 Query: 875 WFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRL 934 WF+ EL R M+++F W +RSELTE GVE+ ID V++ D +++RGRVDRL Sbjct: 908 WFARRELIRTEEMLESFRAWLAGSRSELTEAGVEVPIDTVIEGT-DGAPDVQIRGRVDRL 966 Query: 935 ERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQL-XXXXXXXXXXXXXXXXRLVYPGK 993 ERD GR V+VD+KT +T S+ D Q +AQL YQ+ +L+Y K Sbjct: 967 ERDPLGRTVVVDVKTGRTLPSQADGQAHAQLRTYQVAIAHGGLGGVPETPGGGKLLYVAK 1026 Query: 994 -SAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 GA R+QD LTPA D+W ++R+AA GP F A N C HC + CP Sbjct: 1027 PHNKTGATVREQDALTPADVDEWLGVIREAARRTRGPEFAATLNASCQHCAVASCCP 1083 >tr|A8M3F8|A8M3F8_SALAI Tax_Id=391037 SubName: Full=UvrD/REP helicase;[Salinispora arenicola] Length = 1096 Score = 406 bits (1043), Expect = e-111 Identities = 335/1090 (30%), Positives = 455/1090 (41%), Gaps = 69/1090 (6%) Query: 8 EARELLTPG-SRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWAR 66 + R+L G + G + VLGGPGTGK+ LV+ DPE VL+LT S R R Sbjct: 8 DPRQLKVVGHTAGPMLVLGGPGTGKTTTLVEAVAARVAEGVDPERVLVLTFSRRQAASLR 67 Query: 67 SSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAII 126 + + G G +REPLVR+ +YA+ +LRRAA G+ PRLLT EQD II Sbjct: 68 QRIEARI-----AGDGHRVLREPLVRTFPAYAFGLLRRAAAERGEPSPRLLTGPEQDLII 122 Query: 127 RELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSG 186 RELL E+ + WP L PAL T FA +LR+LL R AERG+ P+EL RLG R G Sbjct: 123 RELLDLVGEEPDNDPVGWPEDLRPALRTRAFAAQLRDLLMRAAERGIGPVELARLGERLG 182 Query: 187 RPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXX 246 R +W AA RF R+Y V+ LR VG A P AELV SA DP Sbjct: 183 RADWPAAARFLREYVAVLALR-DVGNRGSIAYDP----AELVRSATGMLLDDPALLAAER 237 Query: 247 XXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXX 306 VD+ DP L+ +A + ++ DP+ + + Sbjct: 238 RRLAHVYVDEYADTDPAQQDLLATVAGDGKALVVLADPDSSTYAFRGADPGGVVTFPHRF 297 Query: 307 XXA-------VTLTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGTGT-EDGSVTVXXXX 358 A V T S+R AP + A + +ARRL G + R + T G+ V Sbjct: 298 RTASGAPAAQVVFTTSYRAAPRLLEAHARLARRLRGPATHRRLRPLPTAATGTAEVRTFR 357 Query: 359 XXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGS 418 +DGVPW++MAV+ + Sbjct: 358 SAASEAAWLAHALRAAHLLDGVPWAEMAVLVRSTARQLPSLRRALHAAGVPTVVHGEDLP 417 Query: 419 LAEEPXXXXXXXXXXXXXXXXNADQ--ALALITGPIGRVDPV-XXXXXXXXXXXAVAGRS 475 L +P D+ A+AL+ P+G DP+ A+A Sbjct: 418 LHLQPAVAPLLLLLRCALAPDRLDEEAAVALLHSPLGGADPLAERRLRQGLRVMALAAGD 477 Query: 476 PEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYIL 535 G+L+ L + A +P G R G +L Sbjct: 478 RRPSGELITEALRDPAELAGIDRRWAEPAQTVAG------LLAVARETAARPGVTAEEVL 531 Query: 536 WAAWHRSGLQNRWLAAIDR----GGPAGV-------QATRNLEAVTALFDITDQYVSRTS 584 WA W SGL W AA+ R G V A R+L+AV LFD ++ R Sbjct: 532 WAVWRASGLAELWSAALARTPATAGEGDVARRRRAEAADRDLDAVMVLFDAAARFTDRLP 591 Query: 585 GASLSGLLEHVAALQLPRVSEEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNT 643 GA + L+HV LP + P A + + VR+L+AHAA G EWD+V +AG+Q+G+WP+ Sbjct: 592 GARVEVFLDHVLGQDLPADTLAPTADRGDAVRLLTAHAAKGLEWDVVAVAGVQEGVWPDL 651 Query: 644 IPRGGVLATQRLLDELDGVSGN-------XXXXXXXXXXXXXXXXXXXXXXXXXXXVTAV 696 RG +L ++RL+D L G S V+AV Sbjct: 652 RLRGSLLGSERLVDVLAGRSAGAGPRASVVGQTSALLDEERRLFHVAVTRARRRLLVSAV 711 Query: 697 DGDTSGGGQQAALPSEFFFEI-------AQWANGDXXXXXXXXXXXXXXXXXXXXXXXXX 749 T GG PS F E+ A A D Sbjct: 712 ASATVGGDDHDEQPSRFLHELGVADPPPAAAAGPDGDAASDEARTAPLPLSRPPRALTLA 771 Query: 750 XXXXXPDGAVDDAA-----RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD 804 AV D A R+ AA +LARLA GVAGA P+ W GL P+S L G+ Sbjct: 772 SLVAELRAAVTDPASPALRRRAAAAELARLAAEGVAGAHPSDWWGLRPLSDDRPLVADGE 831 Query: 805 VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGSVLH--ALIAEPGASEEQ-LLAE 861 V +TPS +++ C LRWL ERHGG+ P +G+++H A++AE +S+ + LL Sbjct: 832 PVRVTPSGMESALRCSLRWLLERHGGSAPAGAAQGVGNLVHAAAMLAESASSDRRALLDY 891 Query: 862 LARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDD 921 +A + + A W E AR AM+ + W L + E + D Sbjct: 892 VASRFDAIELAARWMVGPERARAEAMVDKLLRWLATNPRRLLAIEHEFAV-----RLNDP 946 Query: 922 GGAIRLRGRVDRLERDGAGRLVIVDIKTAK-TPVSKDDAQQNAQLAMYQLXXXXXXXXXX 980 + L GRVDRLE D GRLV+VD+KT K T V+ D ++ QL YQ Sbjct: 947 RHPVDLVGRVDRLEVDADGRLVVVDLKTGKSTAVTAADLAEHPQLGAYQAAVEAGAFAEF 1006 Query: 981 XXXXXXRLVYPGKSAAAGAAQRDQDPLTPAARDQWRN-LVRQAAEAAAGPHFIARRNDGC 1039 + +AA A ++ Q P W LVR+ A+ A F A N C Sbjct: 1007 GAESGGAALVQLGTAAKDAREQSQPPAGEGPAAGWATALVRRTADTMAAATFAAVANSKC 1066 Query: 1040 SHCPIRPSCP 1049 CP+R SCP Sbjct: 1067 RVCPVRASCP 1076 >tr|C4E8U2|C4E8U2_STRRS Tax_Id=479432 SubName: Full=DNA/RNA helicase, superfamily I;[Streptosporangium roseum DSM 43021] Length = 1051 Score = 378 bits (970), Expect = e-102 Identities = 322/1079 (29%), Positives = 441/1079 (40%), Gaps = 99/1079 (9%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGMWARSSLTTALLRSH 77 G + VL GPGTGK+ +V+ DPE VL+LT S + LR Sbjct: 15 GPLLVLAGPGTGKTTTIVETVVDRIERRGVDPERVLVLTFSRK---------AAEELRER 65 Query: 78 TTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDG 137 TG R R PL + HSYAYA+LRR A G PPRLLT EQ +R LL G+LEDG Sbjct: 66 ITGRMRRTTRTPLALTFHSYAYALLRREAVLAGGVPPRLLTGPEQLLEVRRLLHGELEDG 125 Query: 138 PSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFA 197 WP + AL T GFA ELR+ L+R AERG+D EL LGR GR +W AAGRFA Sbjct: 126 APH---WPDDMREALKTRGFAQELRDFLSRAAERGLDGDELVELGRLHGRADWVAAGRFA 182 Query: 198 RQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDA 257 +Y+ L P L ++L+ +A A DP VD+ Sbjct: 183 DRYQSRFDL----------DMEPVLDYSDLIRTAAGLLA-DPEVRLRERAAYDVVLVDEY 231 Query: 258 QQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-------V 310 Q DP L++ LA + GDP+Q+++ A + Sbjct: 232 QDTDPAQEFLLQQLAGEGRDLIAVGDPDQSIYGFRGADVRGIMRFPESFPGADGENAPVI 291 Query: 311 TLTMSHRCAPAVARAVSGIARRL---PGGSAGRHIDG-TGTEDGSVTVXXXXXXXXXXXX 366 L + R + RA +A RL PGG+A R + E G V V Sbjct: 292 ALRVCRRSGSELLRASRRVAARLPATPGGAAHRDLRALPDAEPGDVRVLVTDGATQEAAV 351 Query: 367 XXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGS----LAEE 422 +DGVPWS+MAV+ +P + G L +E Sbjct: 352 VADTLRRAHLLDGVPWSRMAVL----VRSATRQVPLLRRALVTAGVPVVVGGGELPLFQE 407 Query: 423 PXXXXXXXXXXXXXXXXNADQALA--LITGPIGRVDPVXXXXXXXXXXXA---------- 470 P D+A+A L+TG +G D V A Sbjct: 408 PGVRPLIRLIQVALHPETLDEAMAEELLTGALGGTDMVGVRRLRRALRIAEHEAMTHPDE 467 Query: 471 -----------VAGRSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXX 519 VAG P G+LLVA L +D R V P + Sbjct: 468 RDMVDHSGERDVAG--PRSSGELLVAAL-KDVRELVRVEPHVALPAERLAKLVSGAAEAV 524 Query: 520 XXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQY 579 R G +LW W +GL +W GG G A R+L+AV ALFD ++ Sbjct: 525 ------RQGGTAEDVLWTVWQATGLAEKWTGVSVSGGFRGTMADRDLDAVVALFDHAARF 578 Query: 580 VSRTSGASLSGLLEHVAALQLPRVS-EEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDG 638 V R A + ++ + A ++P S + + VR+L+AH + G EWD+VV+AG+Q+G Sbjct: 579 VDRLPHAGVEVFVDDLVAQEIPGDSLADRAPDTDSVRILTAHRSKGLEWDVVVVAGVQEG 638 Query: 639 LWPNTIPRGGVLATQRLLDELDGVS-GNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVD 697 WP+ RG +L+T ++ +G N T + Sbjct: 639 AWPDLRLRGSILSTDDMVARAEGSEHENPAAVSAALASQLLAEERRLFYVAATRARTRLI 698 Query: 698 GDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDG 757 GG PS F E+ A + D Sbjct: 699 VTAVGGEDSEERPSRFLTELVPGAAEE-------TAVDERSRWLSMSALVADLRSAVSDP 751 Query: 758 AVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLN 817 + R+ AA LARLA GV+GA P W+ L P+S L DVV ++PS ++ Sbjct: 752 TRPASLRRAAAEHLARLAAEGVSGAHPNEWYALTPISDDRPLSWPDDVVRISPSAVENFT 811 Query: 818 DCPLRWLAERHGGTNPRDLRATIGSVLHAL--IAEPG-ASEEQLLAELARVWKLLPFEAD 874 C LRWL E G + D +G+V+HAL +A G SE+ L L +W L F Sbjct: 812 KCGLRWLLETSVGASGTDAARGLGTVIHALAVLAATGMPSEDTLGKRLDEIWHELDFGGV 871 Query: 875 WFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRL 934 W++ + MI FV W EL VG+E ++ ++++GRVDR+ Sbjct: 872 WYNRKQRKVAEQMISKFVRWHQDNPREL--VGLEEAFTAMVSE------GVQIKGRVDRV 923 Query: 935 ERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKS 994 ERD GR VI+DIKT K + +++ QL +YQL Sbjct: 924 ERDAEGRAVIIDIKTGKNGPKDAEIERHPQLGVYQLAALLGAFQRHGMTEPGGAALVQVG 983 Query: 995 AAAG---AAQRDQDPLTPAARDQW-RNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 AAG A ++ Q PL A W R++V A +GP F A+ NDGC C +R SCP Sbjct: 984 DAAGKKDAKEQAQPPLAEDADPGWARDMVDTVALGMSGPFFQAKVNDGCRTCAVRASCP 1042 >tr|Q47SK6|Q47SK6_THEFY Tax_Id=269800 SubName: Full=Putative ATP-dependent DNA helicase;[Thermobifida fusca] Length = 1044 Score = 374 bits (960), Expect = e-101 Identities = 316/1071 (29%), Positives = 434/1071 (40%), Gaps = 100/1071 (9%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGMWARSSLTTALLRSH 77 G + VL GPGTGK+ +V+ DP VL+LT S + R +T L R+ Sbjct: 34 GPLLVLAGPGTGKTTTIVEAIVDRVENRGVDPAHVLVLTFSRKAAQELRERITARLRRT- 92 Query: 78 TTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDG 137 VREPL + HSYAYA++RR +R GD PRLL+ EQ +RELL G+L DG Sbjct: 93 --------VREPLALTFHSYAYALIRREFQRVGDHAPRLLSGPEQLMEVRELLKGELADG 144 Query: 138 PSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFA 197 WP L P L T GFA ELR+ L R ERG+ ++ LGRR GR +W AAG F Sbjct: 145 ---APGWPEQLRPMLHTRGFAEELRDFLMRVQERGLHADDVRELGRRHGREDWVAAGGFL 201 Query: 198 RQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDA 257 +Y + A P AELV A +DP VD+ Sbjct: 202 ERYTGRFDI----------APVPTFNYAELVRVAAN-LLNDPDIQARERAARKVVFVDEY 250 Query: 258 QQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-------XXXXXXXXXXXXXXXXXXXAV 310 Q DP L+ LA ++ GDP+Q+++ V Sbjct: 251 QDTDPAQEELLHALAGDGRDLVVVGDPDQSIYGFRGAEVRNILNFPDRFRTPTGDPAPVV 310 Query: 311 TLTMSHRCAPAVARAVSGIARRLP--------GGSAGRH-IDGTGTEDGSVTVXXXXXXX 361 L R + R +A+RLP G +A R+ + GT G + Sbjct: 311 ALHTCRRSGAELLRVSRALAQRLPAVPGPGGEGVNAHRNLVPAEGTPPGRARMLLAESPV 370 Query: 362 XXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAE 421 +DGVPWS+MAV+ ++ LA Sbjct: 371 HEAAVIADLLRRAHLIDGVPWSRMAVLVRSVTRHVPVLRRALIAADVPVTVDGDDLPLAS 430 Query: 422 EPXXXXXXXXXXXXXXXXNADQALA--LITGPIGRVDPVXXXXXXXXXXXA---VAGRSP 476 EP D+ A L+T G D + GR P Sbjct: 431 EPLVRSMLLLLRCAFHPERLDEEAAHNLLTSAFGEADALGLRRLGRALRQLELDAGGRRP 490 Query: 477 EDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILW 536 L+A + D R V + P + G + +LW Sbjct: 491 ---AAALLAEILHDPRDLVMVDPEVRAPAERIATLLRLVRDSI------AEGANAEEVLW 541 Query: 537 AAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVA 596 WH SGL + L A GG G A R L++V ALF+ +Y R S G LE + Sbjct: 542 RMWHHSGLADTLLRASQAGGRHGAAADRELDSVMALFERAARYCDRLPPGSPEGFLEDLE 601 Query: 597 ALQLP-RVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRL 655 A ++P E Q E VR+L+AH + G EWDLVV+AG+Q+G WP+ RG +L ++L Sbjct: 602 AQEIPGDTLAEQAPQGETVRILTAHRSKGLEWDLVVVAGVQEGTWPDLRLRGSLLGVEQL 661 Query: 656 LDELDGV--SGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEF 713 LD + G + VTAV GG PS F Sbjct: 662 LDTVGGFAETSPAAVVSKQLDEERRLFYVALTRARRELVVTAV-----GGEDVEERPSRF 716 Query: 714 FFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLAR 773 E+ G D V AA A LAR Sbjct: 717 LTEL-----GLGEPERLATGYRWLSLPALVADLRATLLDPHTDEPVRRAA----AAHLAR 767 Query: 774 LAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGTNP 833 LA AGV GADPA W+ L +S ++ L G+ + ++PS ++ C LRWL E G Sbjct: 768 LADAGVRGADPAEWYALTELSDSSPLVLEGEQIRISPSQVEKFTTCELRWLLETAAGAEK 827 Query: 834 RDLRATIGSVLHAL--IAEPGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAF 891 R + IGS++HAL IA +LL + ++W L F W++ + R M+Q F Sbjct: 828 RRAASGIGSIVHALARIAAENPDLPELLRRMDQIWSDLDFGGPWYAEKQRERAEEMLQRF 887 Query: 892 VEWRGQTRSEL--TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKT 949 ++W+ + EL TE +++ G I + G+VDRLERD GR VIVDIKT Sbjct: 888 LDWQKENPRELVATEKKFRVEV-----------GNIEISGQVDRLERDAEGRGVIVDIKT 936 Query: 950 AKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSA------AAGAAQRD 1003 T V + ++ QL +YQL LV PG +A A ++ Sbjct: 937 G-TAVPDREISRHPQLGVYQLALLMAAFEHYG------LVEPGGAALLQIGDRKTAKEQT 989 Query: 1004 QDPLTPAARDQW-RNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 Q L A +W + LV++ A AG F A+ C HC +R SCP ++ Sbjct: 990 QPALADDADPEWPQRLVQKVAAGMAGARFRAKATPSCRHCSVRASCPVQSE 1040 >tr|D1ACX8|D1ACX8_THECU Tax_Id=471852 SubName: Full=UvrD/REP helicase;[Thermomonospora curvata DSM 43183] Length = 1059 Score = 368 bits (944), Expect = 3e-99 Identities = 320/1095 (29%), Positives = 443/1095 (40%), Gaps = 114/1095 (10%) Query: 8 EARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGMWAR 66 E + + + G + VL GPGTGK+ +V+ DPE VL+LT S + Sbjct: 24 EQQRRVVEHAHGPLLVLAGPGTGKTTTIVEAVVDRIERRGCDPERVLVLTFSRK------ 77 Query: 67 SSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAII 126 LR TG R R PL + H YA+A+LRR A R G PPRLL++ EQ + Sbjct: 78 ---AAEELRHRITGRLRRTTRAPLALTFHGYAHALLRRDAIRRGQEPPRLLSAPEQLLEV 134 Query: 127 RELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSG 186 R LL G+ DG WPR L ALTT GFA ELR+ + R AERG P ELE LG G Sbjct: 135 RRLLEGEAADGAVH---WPRRLHEALTTRGFAEELRDFMLRAAERGYGPQELEELGYLKG 191 Query: 187 RPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXX 246 R +W A GRF +YEQ R AV + AA A ++ Sbjct: 192 RDDWVAIGRFMNRYEQ----RFAVDPVLTYDYTDLIEAA-------AALLAEEEVRFQER 240 Query: 247 XXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXX 306 VD+ Q DP L++ LA ++ GDP+Q+++ Sbjct: 241 AAYDAVFVDEYQDTDPAQEHLLKHLAGDGRDLVVVGDPDQSIYGFRGADVRGIMDFPHRF 300 Query: 307 XXA-------VTLTMSHRCAPAVARAVSGIARRLPGG-SAGRH---IDGTGTEDGSVTVX 355 A V L R +PA+ A IARRLP G SA H G EDG V V Sbjct: 301 PTADGRPAPVVALRECRRMSPAILEASRRIARRLPAGPSAAEHRALRPRQGAEDGEVHVV 360 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIP-- 413 ++GVPWS+MAV+ + Sbjct: 361 IADSPGQEAALVADELRRAHLLEGVPWSRMAVLVRSAVRQVPPLRRALAQAGVPVVVAGD 420 Query: 414 --PIGGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXA- 470 P+ G A P + A L+TGP+G D + Sbjct: 421 ELPLMGEPAVRP--FLMLLRAALEKGYLTGEVAEELLTGPLGGADALTLRRLKRALREVE 478 Query: 471 VAGRSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQD 530 G+LLVA L ED R + + P + R G Sbjct: 479 TLSGGDRPVGELLVAAL-EDPRELLLVHPKVRAPAERVA----------HLLQVARQGGT 527 Query: 531 PRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSG 590 +LW W SGL + WL +GG G A R+L+AV LF+ ++ R A G Sbjct: 528 AEEVLWNVWQASGLADAWLEQSAKGGARGAAADRDLDAVVVLFERAARFTDRMPQA---G 584 Query: 591 LLEHVAALQLPRVSEEPVA----QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPR 646 VA + ++ + +A + E VR+L+AH A G EW++V++AG+Q+G+WP+ R Sbjct: 585 PELFVAEISGEEIAGDTIADQAPEGEAVRILTAHRAKGLEWEVVIVAGVQEGVWPDLRLR 644 Query: 647 GGVLATQRLLDEL-------------DGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXV 693 G +L + L++ G + V Sbjct: 645 GSLLGVEELIEHHAGSDLADLLAEGGRGTAAGASMAAKLLDEERRLFYVAVTRARRRLVV 704 Query: 694 TAVDGDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 753 TAV GD + PS F E+A A Sbjct: 705 TAVGGDDT-----EERPSRFLNELAPGA-------LERSELDEKTRWLSLPALVADLRAV 752 Query: 754 XPDGAVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTL 813 D + R+ AA LARLA+AGV GA P W+ + +S + A + +T++PS + Sbjct: 753 VTDPSRPQPLRRAAAAHLARLARAGVRGAHPDSWYAITALSDPRPAFTADEQITISPSQV 812 Query: 814 QTLNDCPLRWL-----AERHGGTNPRDLRATIGSVLHALIAEPGA----SEEQLLAELAR 864 +T C LRWL R GG D AT+G V+HA+ G+ +EE + L Sbjct: 813 ETFTTCGLRWLLASAVGARDGGP---DELATMGKVVHAVAELAGSHGDLAEEDVAQRLDE 869 Query: 865 VWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGA 924 +WK L F + W+S + + M+ F+ W +EL V +E D L G Sbjct: 870 IWKELNFGSSWYSGKQREQAAKMVDKFLAWHRANPNEL--VALEEDFQVEL-------GR 920 Query: 925 IRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQ--LXXXXXXXXXXXX 982 + +RGR+DR ERD GR V+VDIKT+ V + ++ QL +YQ + Sbjct: 921 VVIRGRIDRAERDEHGRAVVVDIKTSAQKVPDKELARHPQLGVYQYAVTLGALQRHGLVE 980 Query: 983 XXXXRLVYPGKSAAAGAAQRDQDPLTPAARD---QW-RNLVRQAAEAAAGPHFIARRNDG 1038 LV GK + A+ + P P A D W + LV A AG F AR ND Sbjct: 981 PGGAVLVQVGKGSYENKAREQRQP--PPAEDGDPDWPKKLVEVVATGMAGEVFQARPNDK 1038 Query: 1039 CSHCPIRPSCPAHTD 1053 C CP+R CP H + Sbjct: 1039 CRTCPVRSCCPVHDE 1053 >tr|A4F8N4|A4F8N4_SACEN Tax_Id=405948 SubName: Full=Possible ATP-dependent DNA helicase; EC=3.6.1.-;[Saccharopolyspora erythraea] Length = 1051 Score = 356 bits (914), Expect = 8e-96 Identities = 248/666 (37%), Positives = 310/666 (46%), Gaps = 31/666 (4%) Query: 5 WGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGM 63 W + R +L G +RVLGGPGTGKS L+ + PE+VL+L S R Sbjct: 15 WDSAGRRVLDSDG-GFLRVLGGPGTGKSTLIAEVAADRIRHGGVAPENVLVLCASRRAAA 73 Query: 64 WARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQD 123 R+ +T L S G EPLVR+VHSYA+AVLR A R PRLL +QD Sbjct: 74 RMRAEITRRLTASDD---GLRTAPEPLVRTVHSYAFAVLRLQAVREQMPAPRLLNGPDQD 130 Query: 124 AIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGR 183 A++R+LL GDLE+G WP L PAL+ GFA ELR+LL R AERGV P L LGR Sbjct: 131 ALVRDLLQGDLEEGAPD---WPERLRPALSVPGFAEELRDLLLRAAERGVGPDGLVELGR 187 Query: 184 RSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXX 243 R RPEW AAGRFARQYEQV LLR A + AAELV SAL AF +DP Sbjct: 188 RHDRPEWVAAGRFARQYEQVTLLRGG-------GDAAGMDAAELVSSALLAFDTDPDLLH 240 Query: 244 XXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXX 303 VDDAQ LDPQ L++ L + A ++AGDP+QAVF Sbjct: 241 VERQRVRHLLVDDAQHLDPQQYWLLQRLGSTAAEFVLAGDPDQAVFTFRGADPGSVRDAD 300 Query: 304 XXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGRHI-DGTGTEDGSVTVXXXXXXXX 362 V LT+ HR + AV AV +A RLPG R + + GSV V Sbjct: 301 PDGGNTVVLTVDHRMSKAVRAAVQRLAERLPGAGPQRRLAEPEDCPGGSVQVRLHASEAQ 360 Query: 363 XXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIP----PIGGS 418 +DGVPWS MAV+ +P P+ Sbjct: 361 EAAWVADQLRRAHLLDGVPWSDMAVVVRSTGLSLPVLRRALLAASVPLVLPVDDVPLAQR 420 Query: 419 LAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPV-XXXXXXXXXXXAVAGRSPE 477 A P + D A L+ +G DP+ +A Sbjct: 421 TAVRP--LLTLLRCAGRPQALDPDSAAELLASSLGGADPLALRRLRRGLRRLELAAGGSR 478 Query: 478 DFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWA 537 GDLLV L D A S GP G+ +LW Sbjct: 479 SSGDLLVEVLRGDDALAALDDSS-------AGPARKVAHLLKVAREAVDDGRSVEEVLWR 531 Query: 538 AWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAA 597 W SGLQ RWL +RGG G QA R+L+AV +LF+ QYV R GA ++G +++ Sbjct: 532 VWQASGLQQRWLTVAERGGITGAQADRDLDAVVSLFEAAAQYVDRLPGADVAGFADYLTG 591 Query: 598 LQLPRVSEEPVAQNEQ-VRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLL 656 Q+ S P A E V VL+AHAA G EW++V I G+Q+G WP+ RG +L +RL+ Sbjct: 592 QQIAGSSLAPSAPKENAVSVLTAHAAAGQEWEVVAIPGVQEGTWPDLRLRGSLLGVERLV 651 Query: 657 DELDGV 662 D L GV Sbjct: 652 DVLSGV 657 Score = 237 bits (605), Expect = 6e-60 Identities = 133/294 (45%), Positives = 177/294 (60%), Gaps = 7/294 (2%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 R+ AA QLARLA AGV GA P W+GL P S + L + V ++PST+ TL+ CPLRW Sbjct: 751 RERAAAQLARLADAGVPGAHPDTWYGLPPSSCQSPLVEGDEPVRVSPSTVDTLSKCPLRW 810 Query: 824 LAERHGGTNPRDLRATIGSVLHALI--AEPGASEEQLLAELARVWKLLPFEADWFSSNEL 881 +AERHGG + +L + G+++HAL+ A GA+EEQL L W+ + A WFS E Sbjct: 811 MAERHGGQDTAELASVTGTLVHALVQAAADGATEEQLHRALDEAWESVDAGAPWFSRKER 870 Query: 882 ARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGR 941 AR MI++F W +R+ELT+VGVE D+D ++ RD G ++RLRGRVDRLE DG GR Sbjct: 871 ARVERMIESFQAWLVASRAELTQVGVERDLDLTIE-GRDGGPSLRLRGRVDRLEADGEGR 929 Query: 942 LVIVDIKTAKTPVSKDDAQQNAQLAMYQL--XXXXXXXXXXXXXXXXRLVYPGKSAA--A 997 V+VD+KT KTPVSK+DA+++ QLA+YQL RL+Y K A Sbjct: 930 PVVVDVKTGKTPVSKNDAEEHPQLAVYQLAAALGAFNDGAWTEPGGARLLYVAKPEARTG 989 Query: 998 GAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 A +R Q L W ++V AA ++ GP ++A N C CP R CP H Sbjct: 990 AATERVQRGLDRDRVQVWLDVVHDAAASSVGPAYVASENADCPRCPARTCCPVH 1043 >tr|Q5YR01|Q5YR01_NOCFA Tax_Id=37329 SubName: Full=Putative helicase;[Nocardia farcinica] Length = 1255 Score = 347 bits (889), Expect = 7e-93 Identities = 205/532 (38%), Positives = 271/532 (50%), Gaps = 14/532 (2%) Query: 526 RAGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSG 585 R G +LWA W S L+ RW+A +RGG G+QA R+L+A LFD YV R Sbjct: 719 RRGAGLEDVLWALWTASRLERRWVAQSERGGAVGMQADRDLDAAVGLFDAAAAYVDRLPR 778 Query: 586 ASLSGLLEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIP 645 A + G +E+++ ++P + E+V +LSAHAA G EWD+V +AG+Q+G+WPN P Sbjct: 779 AGIEGFVEYLSQQEIPHDTRPLTTPGEEVALLSAHAAAGREWDVVAVAGVQEGIWPNPRP 838 Query: 646 RGGVLATQRLLDELDGVSG---NXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSG 702 RG +L T+ L+D L GV G + VTAV+ T Sbjct: 839 RGTLLHTEDLVDLLAGVGGAGEHVSRSAPILAEERRLLLVACSRARRSLLVTAVESVT-- 896 Query: 703 GGQQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDA 762 G + +PS F +A+ D D D Sbjct: 897 -GDRDLVPSRF---LAELLGHDEDGEPGVLPVVDPGRALVMHSLVAELRGAVCDPTADPE 952 Query: 763 ARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGD--VVTLTPSTLQTLNDCP 820 R+ AA QLARLA AGV G P W+G +S L+ D VV L+PST++ L CP Sbjct: 953 RRRRAAFQLARLADAGVRGTAPEEWYGTAELSCADPLWSEEDDAVVALSPSTVEQLRTCP 1012 Query: 821 LRWLAERHGGTNPRDLRATIGSVLHALIAEPGAS--EEQLLAELARVWKLLPFEADWFSS 878 LRW ERHGGT+ + A GS++H L+ E Q+ A L + W+ + W S Sbjct: 1013 LRWALERHGGTDGDNPHAVKGSLVHTLVQALAGRVPEAQVRAALDKAWRAIDPGDGWHSR 1072 Query: 879 NELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDG 938 E R AM++ F+ W TR ELT+ GVE+ +D VL A +D +R+RGR+DRLERD Sbjct: 1073 QERRRTEAMLETFLAWVRNTRGELTQAGVEVPVDCVLPARSEDERPVRIRGRIDRLERDE 1132 Query: 939 AGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGK-SAAA 997 GR VIVD+KT K P+SK A +AQLA YQ+ RLVY K Sbjct: 1133 FGRFVIVDVKTGKNPISKQAAADHAQLATYQVAAASGALDPEGEPGGARLVYVAKPHTKE 1192 Query: 998 GAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 GA QR QDPL AA D WR+ + QAA A GP ++A RNDGC HC + CP Sbjct: 1193 GATQRMQDPLDAAALDSWRDTIHQAAAATRGPSYLAMRNDGCRHCAVAGCCP 1244 Score = 281 bits (720), Expect = 3e-73 Identities = 177/398 (44%), Positives = 219/398 (55%), Gaps = 15/398 (3%) Query: 5 WGAEARELLT-----PGSRGLVR---VLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLT 56 WGAE R LL P +R R VLGGPGTGK+ALLV DP SVL+LT Sbjct: 22 WGAEVRPLLAAIAGPPPARPRWRPWQVLGGPGTGKTALLVDLAAGRIAAGADPASVLVLT 81 Query: 57 GSGRMGMWARSSLTTALLRSHTTGTGRA--AVREPLVRSVHSYAYAVLRRAAERTGDAPP 114 S + R ++T L H + TG A EPLVR++HSYA++VLRR A G+ PP Sbjct: 82 HSKQAAADLRDAVTVRLA-GHDSPTGGVPGATTEPLVRTLHSYAFSVLRRHASAHGNPPP 140 Query: 115 RLLTSAEQDAIIRELLAGDLED-GPSARSAWPRHLLPALTTAGFATELRNLLARCAERGV 173 RLLT AEQDA++RE+L GDL D A WP+ L AL GFA +LR+L+ R ERG+ Sbjct: 141 RLLTGAEQDAVLREMLRGDLADIAEGATGLWPQRLHAALGLDGFAQQLRDLMLRATERGL 200 Query: 174 DPMELERLGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALE 233 P +LERLGR RPEW AAGRF +YEQ +LLR +VG P+ATAPAL AAEL+G+ L+ Sbjct: 201 GPEDLERLGREHDRPEWVAAGRFLLRYEQALLLRWSVGVEAPEATAPALDAAELLGACLD 260 Query: 234 AFASDPXXXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXX 293 A A+D VDDAQ LDPQAA LV V+ A A A++AGDP+QAVF Sbjct: 261 ALATDAELLAAERARIRYLFVDDAQHLDPQAATLVRVVGAAAHTAVVAGDPDQAVFTFRG 320 Query: 294 XXXXXXXXXXXXXXXAVTLTMSHRCAPAVARAVSGIARRLPGGSAGR---HIDGTGTEDG 350 V L +HR P+V A + IA +LPG + R + G + Sbjct: 321 ADARFAADPGAPADRRVVLRENHRSGPSVRLAAARIAAKLPGAAPHRPAVAAESGGGDGV 380 Query: 351 SVTVXXXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVI 388 +V V GVPWS+MAVI Sbjct: 381 AVRVRVLATPAKEAALIADHLRRAHLTGGVPWSRMAVI 418 >tr|A4XB81|A4XB81_SALTO Tax_Id=369723 SubName: Full=UvrD/REP helicase;[Salinispora tropica] Length = 1144 Score = 279 bits (714), Expect = 1e-72 Identities = 215/668 (32%), Positives = 289/668 (43%), Gaps = 39/668 (5%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G + VLGGPGTGK+A LV+ DPE +L+LT S R R + + Sbjct: 50 GPMLVLGGPGTGKTATLVEAVAARVAEGVDPERILVLTFSRRQATGLRQRIEARI----- 104 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGP 138 G G +REPLVR+ +YA+ +LRRAA G+ PRLLT EQD IIRELL E+ Sbjct: 105 AGGGHRVLREPLVRTFPAYAFGLLRRAAAERGEPSPRLLTGPEQDLIIRELLDLVGEEPD 164 Query: 139 SARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFAR 198 + WP L PAL T FA +LR+LL R AERGV P+EL RLG R GR +W AA RF R Sbjct: 165 ADPVGWPEDLRPALRTRAFAAQLRDLLMRAAERGVGPVELARLGERLGRADWPAAARFLR 224 Query: 199 QYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQ 258 +Y V+ LR VG A P AELV SA DP VD+ Sbjct: 225 EYVAVLALR-DVGNRGSIAYDP----AELVRSATGMLLDDPALLAAERRRLAHVYVDEYA 279 Query: 259 QLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-------VT 311 DP L+ +A G + ++ DP+ + + A V Sbjct: 280 DTDPAQQELLATVAGGGKALVVLADPDSSTYAFRGADPGGVVTFPHRFRTASGAPAAQVV 339 Query: 312 LTMSHRCAPAVARAVSGIARRLPGGSAGRHIDG-TGTEDGSVTVXXXXXXXXXXXXXXXX 370 T S+R P + A + +ARRL G + R G+ V Sbjct: 340 FTTSYRAGPRLLAAHARLARRLRGPATHRRTRALPAAAAGAAEVRTFRSAASEAAWLAHA 399 Query: 371 XXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXX 430 +DGVPWS+MAV+ + L +P Sbjct: 400 LRAAHLLDGVPWSEMAVLVRSTGRALPSLRRALHAAGVPTVVHGEDLPLHLQPAVAPLLL 459 Query: 431 XXXXXXXXXNADQ--ALALITGPIGRVDPV-XXXXXXXXXXXAVAGRSPEDFGDLLVATL 487 D+ A+AL+ P+G DP+ A+A G+L+V L Sbjct: 460 LLRCALAPDRLDEEAAVALLHSPLGGADPLAERRLRQGLRVMALAAGDRRPSGELIVEAL 519 Query: 488 SEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNR 547 + A +P G R G +LWA W SGL Sbjct: 520 RDPAELAGIDRRWAEPAQTVAG------LLAVTRETAARPGATAEEVLWAVWRVSGLAEL 573 Query: 548 WLAAIDRGGPAGVQ-----------ATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVA 596 W AA+ R A + A R+L+AV LFD ++ R GA + L+HV Sbjct: 574 WSAALARTPAAAGEGEVARRRRAEAADRDLDAVMVLFDAAARFTDRLPGARVEVFLDHVL 633 Query: 597 ALQLPRVSEEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRL 655 LP + P A + + VR+L+AHAA G EWDLV +AG+Q+G+WP+ RG +L ++RL Sbjct: 634 GQDLPADTLAPTADRGDAVRLLTAHAAKGLEWDLVAVAGVQEGVWPDLRLRGSLLGSERL 693 Query: 656 LDELDGVS 663 +D L G S Sbjct: 694 VDVLAGRS 701 Score = 150 bits (380), Expect = 7e-34 Identities = 104/291 (35%), Positives = 142/291 (48%), Gaps = 10/291 (3%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 R+ AA +LARLA GVAGA P W GL P+S L G+ V +TPS +++ C LRW Sbjct: 839 RRAAAAELARLAAEGVAGAHPDDWWGLRPLSDERPLVADGEPVRVTPSGMESALRCSLRW 898 Query: 824 LAERHGGTNPRDLRATIGSVLH--ALIAEPGASEEQ-LLAELARVWKLLPFEADWFSSNE 880 L ERHGG P +G+++H A++AE +S+ + LL +A + + A W E Sbjct: 899 LLERHGGGAPASAAQGVGNLVHAAAMLAENASSDRRALLDYVAARFDAIELAARWMVGPE 958 Query: 881 LARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAG 940 AR AM+ + W L + +E + LD +R + L GRVDRLE D G Sbjct: 959 QARAEAMVDKLLRWLATNPRRL--LAIEHEFAVRLDDSRH---PVDLVGRVDRLEVDSDG 1013 Query: 941 RLVIVDIKTAK-TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGA 999 RLV+VD+KT K T V+ D ++ QL YQ + + A A Sbjct: 1014 RLVVVDLKTGKSTAVTAADLTEHPQLGAYQAAVEAGAFAEFGTESGGASLVQLGTGAKEA 1073 Query: 1000 AQRDQDPLTPAARDQWRN-LVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 ++ Q P W LVR+ AE A F A N C CP+R SCP Sbjct: 1074 REQAQPPAGEGPAAGWATALVRRTAETMAATTFAAVANSKCRVCPVRTSCP 1124 >tr|Q2J6E2|Q2J6E2_FRASC Tax_Id=106370 SubName: Full=UvrD/REP helicase;[Frankia sp.] Length = 1103 Score = 262 bits (669), Expect = 2e-67 Identities = 289/1063 (27%), Positives = 394/1063 (37%), Gaps = 110/1063 (10%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G + VL GPGTGK+A LV+ DP S+L+LT S R R +T L Sbjct: 41 GPLLVLAGPGTGKTATLVEAVAARIEAGADPRSILVLTFSRRAAGELRERITARLGAEGG 100 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPP---RLLTSAEQDAIIRELLAGDLE 135 G G P + H++ A+LR A ER APP RLL+ EQD+ +R+L+ G E Sbjct: 101 AGGG------PGAWTFHAWCLALLR-AHERP--APPGGLRLLSGPEQDSRLRDLIEGSRE 151 Query: 136 DGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGR 195 DG R WP L+ L T GF E+R LLAR E G++P+ L +L RR+GRP+WAA Sbjct: 152 DG---RPVWPEPLVGCLRTRGFTEEVRALLARAREVGLEPVALAQLARRTGRPDWAALAE 208 Query: 196 FARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVD 255 F Y V AV +LV A+ A VD Sbjct: 209 FYEMYLDVFGFEGAV------------DYTDLVHRAV-VVAESAEGGAWLRGRYRHVFVD 255 Query: 256 DAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVF-------XXXXXXXXXXXXXXXXXXX 308 + Q DP RL+E +A G ++ GDP+Q+++ Sbjct: 256 EYQDTDPAQERLLEAVAGGGGNLVVLGDPDQSIYAFRGAEVAGLLGFPARFPRLDGEPAP 315 Query: 309 AVTLTMSHRCAPAVARAVSGIARRLPG-----GSAGRHIDGTGTED---GSVTVXXXXXX 360 V L R APA A +ARR+P + H D G D G V Sbjct: 316 IVALRRCRRMAPAPLAASRHVARRIPAAGLPVAAIRAHRDLVGRADAGAGQVQARTFPGT 375 Query: 361 XXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSL- 419 +GV W MAV+ + G L Sbjct: 376 GAEAESVADLLRREHLENGVAWDAMAVL---VRTAERIGRLRRVLAAAGVPVSADGDDLP 432 Query: 420 -AEEPXXXXXXXXXXXXXXXXNA---DQALALITGPIGRVDPVXXXXXXXXXXXA---VA 472 A+EP A D A L+T P+G DP Sbjct: 433 VAQEPAAALLLLALRCAEDPAGALTVDAARTLLTSPLGGADPAGLRALGRALRTLERDAG 492 Query: 473 GRSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHR-AGQDP 531 P +LL A ++E P GP R + P Sbjct: 493 SEHPAPSAELLRAAVAEPDHWLA------TIPDDLAGPVRRVGGLLRTAGQALRDSSGAP 546 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFD-ITDQYVSRTSGASLSG 590 + LWA W S R A GG AG A R+L+AV ALFD +T R G ++ Sbjct: 547 QDALWALWSASEWPARLRHASAAGGAAGRAADRDLDAVVALFDAVTRLGQRRGPGGGVAS 606 Query: 591 LLEHVAALQLPRVSEEPVAQNEQ---VRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRG 647 L+ + Q+ +P ++ + VR+L+AH A G EW++VV+ G+QDG WP+ R Sbjct: 607 LVAELTRQQIAGDVLKPAGESVRRRGVRLLTAHRAKGLEWEVVVVCGVQDGTWPDLRERH 666 Query: 648 GVLATQRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQA 707 +L ++L G VTAV+ G Sbjct: 667 SLLGAEQLDAPSRGGLRPPLTRQDLLADERRLFYVALTRARRRLVVTAVNSPEDDG---- 722 Query: 708 ALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCA 767 +LPS F E+ PD + R A Sbjct: 723 SLPSRFLEELG-------VAVEHVPGRPARPLTLVGLVATLRRLATEPDSS--PVMRSAA 773 Query: 768 ATQLARLAKAG-------VAGADPAGWHGLI-PVSTTAALYGAGDVVTLTPSTLQTLNDC 819 +LA LA A V A P W GL+ P ++ + + L+ S+L ++ C Sbjct: 774 QARLAALAAARDQAGRPLVPAAHPDTWWGLLDPTTSDVPVVPVAGPIRLSGSSLSSIGAC 833 Query: 820 PLRWLAERHG-GTNPRDLRATIGSVLHALIAE-----PGASEEQLLAELARVWKLLPFEA 873 LRW E P G V+HAL E A L A L VW+ L F+A Sbjct: 834 SLRWFLEHEAYAVTPASTAQGFGKVVHALADEVTTGRTPADLAALDARLDTVWRQLDFDA 893 Query: 874 DWFSSNELARHRAMIQAFVEWRGQTRS-ELTEVGVEIDIDGVLDAARDDGGAIRLRGRVD 932 W S E A R + F++W R + + V D R G ++LRG +D Sbjct: 894 RWRSDQERAAAREALARFLDWHAAERGRRVIDAEVRFSCD-----LRVAGRDVQLRGFID 948 Query: 933 RLERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPG 992 RLE D AGR+ ++D KT +T V+ + + QL YQL Sbjct: 949 RLELDEAGRVHVIDFKTGRTAVAPAELATHPQLGSYQLAVRAGALDDVL----------- 997 Query: 993 KSAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARR 1035 +AA DQ P + + L R A AAAGP R Sbjct: 998 AAAAPDQPGADQPRAVPGGAELVQ-LRRDAGAAAAGPRLPGER 1039 >tr|A8L2I8|A8L2I8_FRASN Tax_Id=298653 SubName: Full=UvrD/REP helicase;[Frankia sp.] Length = 1135 Score = 261 bits (668), Expect = 3e-67 Identities = 283/1032 (27%), Positives = 379/1032 (36%), Gaps = 128/1032 (12%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G + VL GPGTGK+ LV+ DP S+L+LT S R R L Sbjct: 15 GPLLVLAGPGTGKTTTLVEAVARRIEAGADPASLLVLTFSRRAARHLRERFAVRL----- 69 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGP 138 G AAV P + H++ +LR T RLL+ EQDA +R+L+ G E G Sbjct: 70 ---GAAAVG-PAAWTFHAWCLGLLRAYGAATPLGGFRLLSGPEQDARLRDLIEGSRELG- 124 Query: 139 SARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFAR 198 R WP L L T GFA E+R LL R E GVDP L R+ RR GR +WAA F Sbjct: 125 --RPVWPDPLAGCLNTRGFAEEIRMLLTRAREIGVDPPALARIARRVGRSDWAAVAEFYS 182 Query: 199 QYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQ 258 Y + AL A+LV +A A++P VD+ Q Sbjct: 183 DYLDAL------------GAEGALDYADLVHAAAN-LAAEPDVLAQLRQRYRAVFVDEYQ 229 Query: 259 QLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-------VT 311 DP RL+ +A G ++ GDP+Q+++ A Sbjct: 230 DTDPAQERLLTAVAGGGGDLVVFGDPDQSIYAFRGAEVRGLLDFPNRFPRADGSPAPVAA 289 Query: 312 LTMSHRCAPAVARAVSGIARRLP-GGSAGRH-------IDGTGTEDGSVTVXXXXXXXXX 363 L R APA A +A LP G RH + G V Sbjct: 290 LRRCRRMAPAPLAASRRVAASLPSAGLPVRHVRAHRDLVSAGAVGPGQVAARTYPTAGAE 349 Query: 364 XXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSL--AE 421 +GV W MAV+ + GG L A Sbjct: 350 AAAIAELLRREHLENGVDWDDMAVL---VRSTAPLGLLRRVLTAAGVPVSVAGGELPPAR 406 Query: 422 EP---XXXXXXXXXXXXXXXXNADQALALITGPIGRVDP----VXXXXXXXXXXXAVAGR 474 EP + A AL+T P+G DP A A Sbjct: 407 EPAAALLLTALRCADDPAVQLTPETARALLTSPLGGADPAGLRALGRELRAHDAAARAAA 466 Query: 475 SPEDFGDLLVATLSED--GRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPR 532 G T + D R AVG +P A DP Sbjct: 467 RAAARGTAARGTTARDSTARDAVGPIALPEPRSAPEADGSVLGLPASSAELLREAVADPE 526 Query: 533 YILWA--------------------------AWHRSGLQNRWLAA-----IDR----GGP 557 +L A A L W A+ ++R GGP Sbjct: 527 RVLLAVPDELAAPVRRLGRLLRTVRAELRRGAAPEDALWTLWTASEWGPRLERASAVGGP 586 Query: 558 AGVQATRNLEAVTALFDITDQYVSRTS-GASLSGLLEHVAALQL-PRVSEEPVAQNEQVR 615 AG A R+L+AV ALFD + R G +S ++E + Q+ P ++ + VR Sbjct: 587 AGRSADRDLDAVVALFDAVGRLGERRGPGFGVSSVVEELTRQQIAPETAQARAGRPATVR 646 Query: 616 VLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVSGNXXXXXXXXXX 675 +L+AH + G EW++VV+ G+QDG+WP+ R +L ++L +G Sbjct: 647 LLTAHRSKGLEWEVVVVCGVQDGVWPDLRQRHTLLGAEQLDSPRNGGVRPPRTREELLAD 706 Query: 676 XXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXXXXX 735 VTAVDG G Q PS F E+ Sbjct: 707 ERRLFYVALTRARRRLVVTAVDGADDDGEQ----PSRFLAELGVQVES---------VRA 753 Query: 736 XXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAG-------VAGADPAGWH 788 D A R+ A +LA LA A V A P W Sbjct: 754 RPPRPLTLVGLVAALRRLTVDPEASAAMREAAGVRLAALAAASDETGRALVPAAHPDRWW 813 Query: 789 GLIPVSTTAALYGAGDV-VTLTPSTLQTLNDCPLRWLAERH-GGTNPRDLRATIGSVLHA 846 GL+ V+++ A D + L+ S+L L+ C LRW E P G V+HA Sbjct: 814 GLLDVTSSDVPVVAPDAPIRLSGSSLSGLSSCGLRWFLEHEANAAEPASPAQGFGKVVHA 873 Query: 847 LIAE--PGASE---EQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSE 901 L E G +E E L A L VW+ L F++ W S E A R + F+EW R Sbjct: 874 LADEVTTGRTEARLEALDARLDLVWRHLEFDSRWRSEQERAAAREALGRFLEWHAAQRGR 933 Query: 902 ---LTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDD 958 +EV DI+ G +RLRG +DR+E D AGR+ +VD KT +TP S+ D Sbjct: 934 EVVASEVRFSCDIEVA-------GRVVRLRGFIDRVELDDAGRVHVVDFKTGRTPPSRRD 986 Query: 959 AQQNAQLAMYQL 970 +AQL YQL Sbjct: 987 LATHAQLGSYQL 998 >tr|C4RR19|C4RR19_9ACTO Tax_Id=219305 SubName: Full=UvrD/REP helicase;[Micromonospora sp. ATCC 39149] Length = 1095 Score = 261 bits (666), Expect = 5e-67 Identities = 204/637 (32%), Positives = 268/637 (42%), Gaps = 39/637 (6%) Query: 48 DPESVLLLTGSGRMGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAE 107 DPE VL+LT R R + + G G +REPLVR+ +YAY +LRRAA Sbjct: 6 DPERVLVLTFGRRQATDLRRRI-----EARVAGDGHRVLREPLVRTFPAYAYGLLRRAAA 60 Query: 108 RTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLAR 167 G+ PRLLT EQD IIRELL E+ WP L PAL T FA +LR+LL R Sbjct: 61 ERGEPSPRLLTGPEQDLIIRELLDVVGEEPDDDPVGWPEELRPALRTRAFAAQLRDLLMR 120 Query: 168 CAERGVDPMELERLGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAEL 227 AERGV P+EL RLG R GR +W AA RF R+Y V+ LR + A AEL Sbjct: 121 AAERGVGPVELARLGERLGRADWPAAARFLREYVAVLALRDVSNRG-----SIAYDPAEL 175 Query: 228 VGSALEAFASDPXXXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQA 287 V +A DP VD+ DP L+ VLA G + + DP+ A Sbjct: 176 VRAATGLLLDDPELLEAERRRLAHVYVDELADTDPAQLDLLAVLAGGGKSLVAFADPDSA 235 Query: 288 VFXXXXXXXXXXXXXXXXXXXA-------VTLTMSHRCAPAVARAVSGIARRLPGGSAGR 340 + A V LT S+R P + A +A RL G +A R Sbjct: 236 TYAFRGTDPAGVAAFPHRFRTASGAPAAQVVLTTSYRAGPGLIAATRRLAGRLRGPAAHR 295 Query: 341 HI-DGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXX 399 + G+V V +DGVPWS+MAV+ Sbjct: 296 RLCPLPDAPPGTVQVRTFRSATSEAAWLAQALRAAHLLDGVPWSRMAVLVRSTARQLPSL 355 Query: 400 XXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXXXXXXXNADQ--ALALITGPIGRVDP 457 + L +P D+ A+AL+ P+G DP Sbjct: 356 RRALHTAGVPTVVHGEDLPLHLQPAVAPLLLLLRCALEPARLDEESAVALLHSPLGGADP 415 Query: 458 V-XXXXXXXXXXXAVAGRSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXX 516 + A+A G+L+V L + + +P G Sbjct: 416 LAERRLRQGLRAIALAAGDRRPSGELIVDALRDPEELSGIDRRWAEPAQAVAG------L 469 Query: 517 XXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGGPA-----------GVQATRN 565 R G +LWA W SGL RW AI G A A R+ Sbjct: 470 LAIAREAAQRPGATAEDVLWAVWDASGLAERWAGAITLGRAATGEHETARRWRAEAADRD 529 Query: 566 LEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVA-QNEQVRVLSAHAALG 624 L+AV LFD ++ R GA L+HV LP + P A + E VR+L+AHAA G Sbjct: 530 LDAVLVLFDAAARFADRLPGARTEVFLDHVLGQDLPADTLAPTADRGEAVRLLTAHAAKG 589 Query: 625 HEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDG 661 EWDLV +AG+Q+G+WP+ RG +L ++RL+D L G Sbjct: 590 LEWDLVAVAGVQEGVWPDLRLRGSLLGSERLVDVLAG 626 Score = 143 bits (361), Expect = 1e-31 Identities = 100/299 (33%), Positives = 140/299 (46%), Gaps = 10/299 (3%) Query: 756 DGAVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQT 815 D A R AA +LARLA AGV GA P W GL +S L G+ V +TPS +++ Sbjct: 782 DPATPYHRRSAAAAELARLAAAGVPGAHPDDWWGLRGLSDDRPLVDEGEPVRVTPSGMES 841 Query: 816 LNDCPLRWLAERHGGTNPRDLRATIGSVLH--ALIAEPGASEEQLLAE-LARVWKLLPFE 872 C LRWL ERHGG+ P +G+++H A++AE +++ L E +A + + Sbjct: 842 ALRCSLRWLLERHGGSGPASAAQGVGNLVHAAAMLAEDASADRSALLEYVAARFDAIELA 901 Query: 873 ADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVD 932 A W E R AM+ + W L + +E + LD D + L GRVD Sbjct: 902 ARWMVGPERERAEAMVDKLLRWLAGNPRRL--LAIEHEFAVRLD---DPHRPVELTGRVD 956 Query: 933 RLERDGAGRLVIVDIKTAK-TPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYP 991 RLE D GRLV+VD+KT K T V++ + ++ QL YQ + Sbjct: 957 RLEVDADGRLVVVDLKTGKSTVVTEREIGEHPQLGAYQAAVEAGAFAEFGDESGGAALVQ 1016 Query: 992 GKSAAAGAAQRDQDPLTPAARDQWRN-LVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 + A A ++ Q W LVR+ A+ A F A N C CP+R SCP Sbjct: 1017 LGTGARDAREQSQPAAGQGPAAGWATALVRRTADTMAAATFAAVANSKCRVCPVRTSCP 1075 >tr|Q0RD02|Q0RD02_FRAAA Tax_Id=326424 SubName: Full=Putative ATP-dependent DNA helicase; EC=3.6.1.-;[Frankia alni] Length = 1170 Score = 256 bits (655), Expect = 9e-66 Identities = 278/1032 (26%), Positives = 381/1032 (36%), Gaps = 115/1032 (11%) Query: 7 AEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWAR 66 A+ R + PG G + VL GPGTGK+A LV+ DP S+L+LT S R R Sbjct: 48 AQRRVIEHPG--GPLLVLAGPGTGKTATLVEAVAARIEAGADPRSILVLTFSRRAAGELR 105 Query: 67 SSLTTALLRSHTTGTGRAAVRE-------PLVRSVHSYAYAVLRRAAERTGDAPPRLLTS 119 +T L G G +A R P + H++ A+LR RLL+ Sbjct: 106 ERITARL------GPGGSASRGGPGSGGGPGAWTFHAWCLALLRAHDRPAPHGGFRLLSG 159 Query: 120 AEQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELE 179 E+D+ +REL+ G EDG R WP L AL T GF E+R LLAR E G++P+ L Sbjct: 160 PERDSRLRELIEGSREDG---RPVWPPQLARALGTRGFTEEVRALLARAREVGLEPVGLA 216 Query: 180 RLGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDP 239 +L RR+ RP+WAA F Y V A+ A A + G AL A Sbjct: 217 QLARRTDRPDWAALAEFYEMYLDVFGFEGALDYADLVHRAVVVAEGAEAGEALRA----- 271 Query: 240 XXXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXX 299 VD+ Q DP RL+ +A G ++ GDP+Q+++ Sbjct: 272 --------RYRHVFVDEYQDTDPAQERLLRAVAGGGRDLVVFGDPDQSIYAFRGAEVAGL 323 Query: 300 XXXXXXXXXA--------VTLTMSHRCAPAVARAVSGIARRLPG-----GSAGRHIDGTG 346 V L R APA A +ARR+P H D G Sbjct: 324 LDFPQRFGTPGRGGGAPIVALRTGRRMAPAPLLASRHVARRIPAAGLPVAEIRAHRDLIG 383 Query: 347 TED---GSVTVXXXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXX 403 D G V V + PW MAV+ Sbjct: 384 RTDLGAGRVQVRTYPSAGAEAEAVADLLRREHLENATPWPAMAVL-VRTADRIARLRRVL 442 Query: 404 XXXXXXXSIPPIGGSLAEEP---XXXXXXXXXXXXXXXXNADQALALITGPIGRVDPV-- 458 S+ +A+EP AD A L+T P+G DP Sbjct: 443 TAAGVPVSVDGDDLPVAQEPAAALLLLALRCADNPAGALTADAARTLLTSPLGGADPAGL 502 Query: 459 --XXXXXXXXXXXAVAG--------------------RSPEDFGDLLVATLSEDGRPAVG 496 A AG R P +L+ +++ R V Sbjct: 503 RELGRALRAFDRDAGAGDRDAGAGDRDAGGGDRDAGARQPAASAELVRQAVADPDRWLVR 562 Query: 497 SAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGG 556 A P + G P LWA W SG Q +AA GG Sbjct: 563 VADPVARPARRVG-----DLLVVARRALREPAGSPEQALWALWSASGWQQALVAASAAGG 617 Query: 557 PAGVQATRNLEAVTALFDITDQYVSRTS-GASLSGLLEHVAALQLPRVSEEPV---AQNE 612 AG A R+L+AV ALFD + R G + L++ + Q+ + PV A+ Sbjct: 618 AAGRAADRDLDAVVALFDAVARLAQRRGPGTGAASLVDELGRQQIAADAIAPVGEDARRR 677 Query: 613 QVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVSGNXXXXXXX 672 VR+L+AH A G EWD+V + G+QDG+WP+ R +L ++L G Sbjct: 678 GVRLLTAHRAKGLEWDVVAVCGVQDGIWPDLRERHSLLGAEQLDAPARGGLRPPLTRQDL 737 Query: 673 XXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANGDXXXXXXXX 732 VTAV+ G +LPS E+ G Sbjct: 738 LADERRLFYVALTRARRRLLVTAVNSPDDDG----SLPSRLLDEL-----GVAVENISGR 788 Query: 733 XXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAG-------VAGADPA 785 A+ AAR+ +LA LA A V A P Sbjct: 789 PARPLTLVGLVATLRRLATEPTSSPALRAAARR----RLAALAAARDDAHRPLVPAAHPT 844 Query: 786 GWHGLIPVS-TTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHG-GTNPRDLRATIGSV 843 W GL+ V+ + + G + L+ S+L ++ C LRW E G V Sbjct: 845 TWWGLLDVTDSDVPVVAPGAPLRLSGSSLSSIGTCSLRWFLEHEAHAVTVASTAQGFGKV 904 Query: 844 LHALIAE-----PGASEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQT 898 +HAL E A L A L VW+ L +EA W S E A R + F+ W Sbjct: 905 VHALADEVTTGRTPADLAALDARLDTVWRHLDYEARWRSDQERAAAREALARFLAWHAGE 964 Query: 899 RSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSKDD 958 R V E+ L A G + LRG +DRLE D AGR+ ++D KT ++ + + Sbjct: 965 RGRRV-VDAEVRFTCRLHVA---GREVMLRGFIDRLELDDAGRVHVIDFKTGRSAPGRAE 1020 Query: 959 AQQNAQLAMYQL 970 + QL YQL Sbjct: 1021 LATHPQLGSYQL 1032 >tr|A0LVT8|A0LVT8_ACIC1 Tax_Id=351607 SubName: Full=UvrD/REP helicase;[Acidothermus cellulolyticus] Length = 1095 Score = 244 bits (624), Expect = 4e-62 Identities = 212/721 (29%), Positives = 294/721 (40%), Gaps = 98/721 (13%) Query: 5 WGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXXDP-ESVLLLTGSGRMGM 63 W AE + +L G + +LGGPGTGK+ LL++ E+VL+LTG R Sbjct: 25 WDAEQQAVLAHRG-GPLLILGGPGTGKTTLLIETVADRVSRGEVALENVLVLTGQRRSAA 83 Query: 64 WARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQD 123 R + L R+ REPL R+ HSYA+ VL A + G+ PPRLLTSAEQD Sbjct: 84 ELRRRIALRLGRTS---------REPLARTFHSYAFGVLCADAIQRGEPPPRLLTSAEQD 134 Query: 124 AIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGR 183 IIRELL GDL+ G + WP L PAL T GFA ELR L + +RG+ P ++ RLGR Sbjct: 135 VIIRELLRGDLDRGATG---WPERLRPALPTRGFARELREFLQQAVQRGLTPDDVARLGR 191 Query: 184 RSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXX 243 ++GR +W A GRFAR+Y QV LR A G AEL+ +A P Sbjct: 192 QAGRDDWVAIGRFAREYSQVTALRDAAG----------YDPAELILAATALLQEHPQLLE 241 Query: 244 XXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXX 303 VD+ ++ DP RL+ + +GA +IA DP+Q+V+ Sbjct: 242 SCRVRHALVVVDEYEETDPAQRRLLRAITSGAAL-VIAADPDQSVYGFRGADPLGVREFL 300 Query: 304 XXXXX----AVTLTMSHRCAPAVARAVSGIARRL-----PGGS----------------- 337 V L ++R PA+ AV +A RL PG S Sbjct: 301 SDFADQRPRVVVLGRAYRGGPALLAAVRRLAERLPVVVPPGVSAAAYRGLAVGAEAGAVR 360 Query: 338 ----AGRHIDGTGTE------------------DGSVTVXXXXXXXXXXXXXXXXXXXXX 375 AG + G G DGSV V Sbjct: 361 ALAGAGAGVAGAGAAAADGDGSVDVRAGAGADGDGSVDVRAFATPGAQAAYIAYHLRHAH 420 Query: 376 XVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXXX 435 V+G+ W+ MAV+ +P + + P Sbjct: 421 LVEGLGWTAMAVLVRSAAQIPPLRRALTAAGVPVR-VPEQSSPIVDVPIVRHLLLALRIA 479 Query: 436 XXXXNADQALA----------LITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLVA 485 D A L+ GPIGR DP+ E +++A Sbjct: 480 AGQPLLDVERAPTAAASLAEELVAGPIGRADPLQLRRLRIALRRLDRAAGGERSSAVVLA 539 Query: 486 TLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDP----RYILWAAWHR 541 + D R Q P RA +P +LW W+ Sbjct: 540 QVLNDPRDL--EVIDEQAAAPALRVARAIEAG-------RRAVTEPAATAETVLWEIWNA 590 Query: 542 SGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLP 601 +GL A GG G A R+L+AV ALF +YV R A + +++ ++P Sbjct: 591 TGLATELYAQALSGGAVGAAADRDLDAVMALFAAASRYVDRLPRAGAALFADYLLGQEIP 650 Query: 602 RVSEEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 + A + + V +L+AHAA EWD+VV+AG+Q+G+WP+ RG +L + LD LD Sbjct: 651 TDTLAARAPEPDGVDLLTAHAAKSREWDVVVLAGVQEGVWPDLRRRGSLLGLRDFLDVLD 710 Query: 661 G 661 G Sbjct: 711 G 711 Score = 139 bits (349), Expect = 3e-30 Identities = 93/290 (32%), Positives = 127/290 (43%), Gaps = 10/290 (3%) Query: 760 DDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDC 819 DDA + AA LA+LA AG+ GA P GW+GL ST L + V ++PS L+ C Sbjct: 806 DDAVARRAAGHLAQLAAAGIPGAAPDGWYGLPAPSTDQPLRRDDEPVPVSPSRLELFTRC 865 Query: 820 PLRWLAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEADWFSSN 879 PLRWL E GG +G+ +H A QL L WF++ Sbjct: 866 PLRWLLESCGGRGRSSASQVVGTAVHRAAATFSVDVAQLRERLDAALADTDLGTGWFAAA 925 Query: 880 ELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGA 939 + R AM++ W + L + VE D + G L GRVDRLE+D Sbjct: 926 QRDRAAAMVERLAAWMARNPRRL--LAVERDFQVTV-------GRALLTGRVDRLEQDDD 976 Query: 940 GRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGA 999 GRL +VD+KT + V K D ++ QL YQ+ L++ + Sbjct: 977 GRLYVVDLKTGRRAVRKADLAEHPQLGAYQVAVVEGAFDEGRTPAGAALLFLDEDRPE-P 1035 Query: 1000 AQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 + Q PL A ++ + AE A F A NDGC CP+R CP Sbjct: 1036 VEWGQAPLEAAGGSWAHEMIMKCAEGMAAAVFDAVANDGCRFCPVRICCP 1085 >tr|A4ALD4|A4ALD4_9ACTN Tax_Id=312284 SubName: Full=ATP-dependent DNA helicase;[marine actinobacterium PHSC20C1] Length = 1033 Score = 243 bits (619), Expect = 1e-61 Identities = 276/1049 (26%), Positives = 398/1049 (37%), Gaps = 102/1049 (9%) Query: 23 VLGGPGTGKSALLVQXXXXXXXXXX-DPESVLLLTGSGRMGMWARSSLTTALLRSHTTGT 81 V+G PG+GK+ LV+ PE +++L+ + R S T LR Sbjct: 37 VVGAPGSGKTETLVEVVAERVHSRGWSPEQIVVLSAT-------RQSATA--LRDRLASR 87 Query: 82 GRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSAR 141 A P+ R+ +S A+ V+R AA GD P LLT AEQD II ELLAG++ DG A Sbjct: 88 IDAPTLGPMARTANSLAFEVIREAAAVAGDGAPTLLTGAEQDQIIAELLAGEIADGSGA- 146 Query: 142 SAWPRHL-LPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQY 200 WP HL GF TELR+L+ RC E GV P +L +LG R+ RPEW AA F Y Sbjct: 147 -PWPSHLDAEVRRLRGFRTELRDLMMRCVEFGVTPRDLAQLGERNDRPEWVAASAFISVY 205 Query: 201 EQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQQL 260 + V +A+ A+ AA L+ A VDDA +L Sbjct: 206 DAV---KASYRDRHFDASELLAEAAALIAEGHYAAVD----------RLRLVIVDDAHEL 252 Query: 261 DPQAARLVEVLAAGAEFALIAGDPNQAV--FXXXXXXXXXXXXXXXXXXXAVTLTMS--H 316 L+ LA + GDP+ F TL +S H Sbjct: 253 TEATISLLRALATRGITIIGFGDPDLTTGSFRGAQPGVLSRWAEQLELENCQTLFLSSVH 312 Query: 317 RCAPAVARAVSGIARR--LPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXXXX 374 R + ++ AV + +R + G R TE S+ Sbjct: 313 RHSASLRSAVIDVTQRVGVSGLIEQRKSMSVATEPSSIHSFQLSTPAEEVAFIARHLREK 372 Query: 375 XXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXXX 434 ++ VPWS+MAVI S+ ++ +E Sbjct: 373 HVLESVPWSRMAVI-VRTGSLIPSLARQLRTLEVVTSVSSARSAVRDEFSVNGLIVLLEL 431 Query: 435 XXXXXNADQALA--LITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFGDLLV--ATLSED 490 D A A L++ +G D V G D D L+ A + Sbjct: 432 ALERRTLDAASAVELLSSSVGGFDAVSLRRLKAALRHEALGAEIYDSADQLIAQALAAPA 491 Query: 491 GRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLA 550 G ++ + S Q AG +LW AW RSGL +RW Sbjct: 492 GFTSIETRVSRQAAA--------VAKNLHETAAAGAAGDTIEELLWGAWQRSGLADRWFT 543 Query: 551 AIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVAQ 610 G +A R+L+AV ALF ++V R A + L + V+E+ +A Sbjct: 544 QALGSGVVAEEANRHLDAVVALFSSAKRFVERRPDAPANVFLTEWLSAD---VAEDTLAA 600 Query: 611 N---EQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELDGVS-GNX 666 + V V + + +G E+D+VV+AG+Q+ +WPN RG +L L L G Sbjct: 601 RSIVDSVTVGTPASVIGQEFDVVVVAGVQENVWPNLRVRGSLLGAHDLPRVLAGEKLAVA 660 Query: 667 XXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGGQQAALPSEFFFEIAQWANGDXX 726 VTAV+GD + +PS F I Sbjct: 661 DRRREVLHDELRMFAQAISRATREVLVTAVEGDDN-------MPSPFLTLIPS------P 707 Query: 727 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQLARLAKAGVAGADPAG 786 P A AR LA+ GV GADP+ Sbjct: 708 DEPVRARPPLSLRGLVGVLRRELTTSANPGAAASSLAR---------LAREGVPGADPSS 758 Query: 787 WHGLIPVSTTAALYGAGD---VVTLTPSTLQTLNDCPLRWLAERHGGTNPRDLRATIGSV 843 W+GL STTA L + V ++PS +++ CPL W ++ GG+ + + +G++ Sbjct: 759 WYGLRSPSTTAPLVDLSEPDAKVRVSPSRMESFESCPLHWAIDQLGGST-SNTASNLGTL 817 Query: 844 LHALIAEPGA--SEEQLLAELARVWKLLPFEADWFSSNELARHRAMIQAFVEW-RGQTRS 900 +H +AE + E L + W + FEA W S E R + + Q + R T + Sbjct: 818 IHG-VAETATDFNAEALFKAVEDRWSEMSFEASWQSEAEKLRAKKLTQHLATYLRDFTAN 876 Query: 901 --EL--TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVDIKTAKTPVSK 956 EL E+G + ++ L L G++DR+E G VIVD+KT K S Sbjct: 877 GGELISNEMGFTLPLEQAL-----------LSGKIDRVEMYGGTTAVIVDLKTGKNEPST 925 Query: 957 DDA-QQNAQLAMYQL---XXXXXXXXXXXXXXXXRLVYPGKSA-AAGAAQRDQDPLTPAA 1011 D A + QLA YQL +LV SA Q P+ Sbjct: 926 DKAVADHPQLAAYQLAFASGAVEGVPEGLENGGAKLVVLSPSAKTRDYVDPKQQPMNDEE 985 Query: 1012 RDQWRNLVRQAAEAAAGPHFIARRNDGCS 1040 + +R V + A AG F+AR + C+ Sbjct: 986 LELFRQRVIEDARGMAGSVFVARVSSHCT 1014 >tr|C6R6J4|C6R6J4_9CORY Tax_Id=553206 SubName: Full=Helicase, uvrd/rep family;[Corynebacterium tuberculostearicum SK141] Length = 1027 Score = 237 bits (604), Expect = 7e-60 Identities = 198/649 (30%), Positives = 269/649 (41%), Gaps = 81/649 (12%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXX----DPESVLLLTGSGRMGMWARSSLTTALL 74 G +V G GTG S+ L+ DP +L++ S G R L+ L Sbjct: 23 GTWKVTGAAGTGVSSFLIDTVIHALDKARETGADPSGILVIAPSKESGARLRRELSERL- 81 Query: 75 RSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDL 134 A + +VRSVHS A+A+LR AAE RL+T AEQDA+IRELL G Sbjct: 82 -------EDYAAQTSMVRSVHSLAFALLRTAAEEE----LRLITGAEQDAVIRELLTGQA 130 Query: 135 EDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAG 194 EDG +WP + PAL GFA +LR+ L R ERG+ P +LERLG GRP W+AAG Sbjct: 131 EDG---HGSWPAEMRPALEYVGFARQLRDFLLRSIERGLGPGDLERLGAEHGRPMWSAAG 187 Query: 195 RFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXV 254 F R+YE+V LL + A + AAELV + L+ V Sbjct: 188 EFLREYERVQLL----------SRAHSYSAAELVTAVLQ------RPQLLREHPFHTIIV 231 Query: 255 DDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTM 314 DDAQ LDP A +L+ +A A+ ++ GD +Q+VF + LT Sbjct: 232 DDAQLLDPTAGKLIRDMAPQADLVVVGGDADQSVFAFRGASSRFLRDFPADHD--IELTE 289 Query: 315 SHRC-APAVARAVSGIARRLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXXX 373 HR APA V DG+ + + TV Sbjct: 290 PHRTPAPACISIVDS--------------DGSLRDVVANTVRRRHLE------------- 322 Query: 374 XXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXXX 433 DGVPW +AVI I P LAE+ Sbjct: 323 ----DGVPWRDIAVI-VRSTGDIGQMRRTLLAAGVPVHISPTDVVLAEQRLVSAVLLALR 377 Query: 434 XXXXXXNADQALALITGPIGRVDPV-XXXXXXXXXXXAVAGRSPEDFGDLLVATLSEDGR 492 + + L+TGP+G DPV R + LL L + Sbjct: 378 ALEEDLSNSELEELLTGPVGGADPVTLRRLIRGLRRWDSTTRGIDSLRGLLYGELPD--- 434 Query: 493 PAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAI 552 + Q ++ +G +LWA W + L NR A+ Sbjct: 435 ------FNGQLTEREYSILERVRAVLSAGRDALASGDSVEEVLWAVWSATELDNRLQASA 488 Query: 553 DRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPR-VSEEPVAQN 611 RGG G QA R+L+A+ ALFD YV R +SL L H+ +LP V + A Sbjct: 489 LRGGATGSQADRDLDAMMALFDAAGDYVERRPDSSLRAFLTHITEQELPTGVRDRRTAIP 548 Query: 612 EQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLDELD 660 + V +L+AH A+G EWD V++AG Q+G WP+ G + + L+D LD Sbjct: 549 QAVEILTAHGAVGREWDTVIVAGAQEGSWPSLGETGSIFGQEDLIDLLD 597 Score = 101 bits (252), Expect = 5e-19 Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 25/305 (8%) Query: 761 DAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCP 820 + R+ AA QLARLA A + GA P W V+ L+ +G +L+PS ++ L +CP Sbjct: 729 EVERKQAARQLARLAAADIPGAHPEQWWSARSVAAEVPLHTSG---SLSPSRVEALLNCP 785 Query: 821 LRWLAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEA-----DW 875 L+ + + G++ HA G + AE A++ + FE W Sbjct: 786 LKAVLGNVAEDPSTEEHLLRGTLAHAFFEALGRGMD---AEKAKLLVMEAFERIQDVPQW 842 Query: 876 FSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLE 935 +L ++ EW Q+ GVEI + GV + +R+ G +DRL Sbjct: 843 QLRFKLDEFSTLLDRAREWACQSEVNQELAGVEIPV-GVRVSEE-----VRIGGYMDRLL 896 Query: 936 RDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXR-------L 988 RD G ++VD+KT ++ +K + + + QL YQL L Sbjct: 897 RDEEGNYLVVDLKTGRSKPAKKEGEDHVQLMTYQLALAHGAFDGHQVHDGEGMPRQGGVL 956 Query: 989 VYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSC 1048 VYPG + + Q +P A +++ L+ E GP AR N C CPIR C Sbjct: 957 VYPG-ATTKKIGEIWQSDKSPEALEEFAALLPPLVEEMRGPRITARTNKDCDKCPIRSIC 1015 Query: 1049 PAHTD 1053 P + Sbjct: 1016 PVQEE 1020 >tr|C1YL28|C1YL28_NOCDA Tax_Id=446468 SubName: Full=DNA/RNA helicase, superfamily I;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 714 Score = 237 bits (604), Expect = 7e-60 Identities = 169/541 (31%), Positives = 236/541 (43%), Gaps = 48/541 (8%) Query: 528 GQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGAS 587 G D +LW W SGL +R L A GG G A R+L+AV ALF+ +Y R S Sbjct: 203 GADAEQVLWELWRDSGLADRLLRASLAGGRRGAAADRDLDAVVALFESAARYCDRLPPGS 262 Query: 588 LSGLLEHVAALQLPRVS-EEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPR 646 +G LE +AA ++P S E + E VR+L+AH + G EW LVV+AG Q+G WP+ R Sbjct: 263 PAGFLEDLAAQEIPGDSLAERAPEGEAVRILTAHRSKGLEWGLVVVAGAQEGDWPDLRLR 322 Query: 647 GGVLATQRLL--DELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAVDGDTSGGG 704 G +L + L+ D S VTAV GG Sbjct: 323 GSLLGVEELVDTDVHSADSSGAALASKLLDEERRLFYVALTRARRTLVVTAV-----GGE 377 Query: 705 QQAALPSEFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAAR 764 PS F E+ D + R Sbjct: 378 DTDERPSRFLNEMG---------VGEPEPVSTGLRWLSLPSLVADLRSVVTDPGAPEPLR 428 Query: 765 QCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWL 824 + AAT LARLA+ GV GADPA W+ L P + L D + ++PS +++ +C LRWL Sbjct: 429 EAAATHLARLAEEGVRGADPAEWYALTPFTDDRPLAEEEDTIRVSPSQVESFTNCQLRWL 488 Query: 825 AERHGGTNPRDLRATIGSVLH--ALIAEPGASEEQLLAELARVWKLLPFEADWFSSNELA 882 ER G + D + +G+V+H A++ G++ +++ + +W L F W + + Sbjct: 489 LERAAGASSGDSASALGTVVHAVAVLVAQGSTPDEISGRMDEIWADLDFGGPWQARAQRD 548 Query: 883 RHRAMIQAFVEWRGQTRSEL--TEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAG 940 R M++ V+W EL TE G +D+ G I + GRVDRLERD G Sbjct: 549 RADTMVRKLVDWEAANDRELVVTEEGFRVDV-----------GGIEITGRVDRLERDDQG 597 Query: 941 RLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAA--- 997 R V+VDIKT K DD ++ QL +YQ+ L PG +A Sbjct: 598 RAVVVDIKTGKN--KADDLARHPQLGVYQMAVLKGAFAKLG------LTEPGGAALVQVG 649 Query: 998 ----GAAQRDQDPLTPAARDQWR-NLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHT 1052 A ++ Q PL+ W LVR+ A G F A RN GC C +R CP Sbjct: 650 EKIQRAREQPQPPLSEDPDPGWAGTLVREVATGMGGSRFTATRNKGCRSCAVRACCPVQD 709 Query: 1053 D 1053 + Sbjct: 710 E 710 >tr|C0U8X9|C0U8X9_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helicase, superfamily I;[Geodermatophilus obscurus DSM 43160] Length = 1048 Score = 234 bits (598), Expect = 4e-59 Identities = 170/528 (32%), Positives = 233/528 (44%), Gaps = 33/528 (6%) Query: 534 ILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLE 593 +LWA W RSGL RW A GG AG A R+L+AV ALFD +V R A++ +E Sbjct: 536 VLWAMWQRSGLAGRWARASAAGGAAGAVADRDLDAVVALFDAAAGFVDRLPSATVGAFVE 595 Query: 594 HVAALQLPRVSEEP-VAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLAT 652 H++A +LP V + + VR+L+AHA+ G EWD+V +AG+Q+G+WP+ RG +L T Sbjct: 596 HLSAQELPGVGGAGRESATDAVRLLTAHASKGLEWDVVCVAGVQEGIWPDLRDRGTLLGT 655 Query: 653 QRLLDELDGVSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXV-TAVDGDTSGGGQQAALPS 711 + L++ + G+ G V TAV+G G A + Sbjct: 656 EVLVERVAGIDGAVLDRRVQMLAEERRLFYVACTRARRRLVVTAVEGALDG--PDAGATA 713 Query: 712 EFFFEIAQWANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGAVDDAARQCAATQL 771 F ++ D D + A R AA L Sbjct: 714 SRFLDLVVPPPDDGRPLTPLPRSLTLPALVAELRRAVS------DPQTEPARRSAAAAVL 767 Query: 772 ARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRWLAERHGGT 831 RLA GV GA PA W GL P+S A L G+ V + PS ++T CPL+W+ G Sbjct: 768 RRLADEGVPGASPADWWGLAPLSDDAPLVPDGEAVRVRPSAIETFQRCPLKWVLGAVGAE 827 Query: 832 NPRDLRATIGSVLHAL---IAE--PGASEEQLLAELARVWKLLPFEADWFSSNELARHRA 886 D T+GS +HA+ +AE P A LAE L P W + R Sbjct: 828 ASPDATRTVGSAVHAVAQQVAEGLPAAGAPAALAEELDQLDLGP---GWADQRQRIAARD 884 Query: 887 MIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAGRLVIVD 946 M+ F+ W EL + E D D + G R+RG+VDRLERDGAGRLV++D Sbjct: 885 MLDRFLRWHAANGREL--LAAEADFDVTV-------GRARIRGQVDRLERDGAGRLVVID 935 Query: 947 IKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKSAAAGAAQRDQDP 1006 +KT ++ + D + QLA YQ+ + S + A ++ QDP Sbjct: 936 LKTGRS--AARDIDTHGQLAAYQVAVAAGAFGEHGEAPGGAALLQVGSGSK-AKEQAQDP 992 Query: 1007 L---TPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAH 1051 L P LV Q + F R CS CP R SCP H Sbjct: 993 LPAGVPVGETWAGELVAQVGDGMGAGTFEVRTGSHCSRCPARRSCPLH 1040 Score = 202 bits (514), Expect = 2e-49 Identities = 137/378 (36%), Positives = 173/378 (45%), Gaps = 24/378 (6%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G + VL GPGTGK+ +V+ DPE +L+LT S R R + + R+ Sbjct: 26 GPLLVLAGPGTGKTTTIVEAVAARIDGGVDPEQILVLTFSRRAAAELRDRVAARVART-- 83 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGP 138 +REPL R+ HSYAY VLRRAA G+APPRLLT+AEQDA++ ELL GDL Sbjct: 84 -------IREPLARTFHSYAYGVLRRAALLRGEAPPRLLTAAEQDALVAELLRGDLAGEG 136 Query: 139 SARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFAR 198 + R WP LLPALTTAGF ELR LL R ERGVD L R +G W A F Sbjct: 137 AVR--WPESLLPALTTAGFRGELRELLLRATERGVDAELLAAWSRETGNEAWLHAAAFQE 194 Query: 199 QYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQ 258 QYE V A G A AELV +A+ DP VD+ Q Sbjct: 195 QYEAVTAFSTAGG-----GDASGYDPAELVRAAIAELEDDPALLRAERERARWLFVDEYQ 249 Query: 259 QLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-------VT 311 DP L+++LA G ++ GDP+QAV+ ++ Sbjct: 250 DTDPAQVELLQLLAGGGGDLVVVGDPDQAVYTFRGAEPRGIVEFPERFRTVSGRPAPRLS 309 Query: 312 LTMSHRCAPAVARAVSGIARRLPGGSAGRHIDGT-GTEDGSVTVXXXXXXXXXXXXXXXX 370 L + R PA+ +A LPG R + G E+G+ V Sbjct: 310 LGVCRRSGPALLDVSRRVAEALPGPWEHRRLAAVEGAEEGAAEVHVFGSASVEAAYVADT 369 Query: 371 XXXXXXVDGVPWSQMAVI 388 VDGVPWS MAV+ Sbjct: 370 LRRAHLVDGVPWSGMAVV 387 >tr|C2BJG0|C2BJG0_9CORY Tax_Id=525264 SubName: Full=Helicase;[Corynebacterium pseudogenitalium ATCC 33035] Length = 1027 Score = 233 bits (593), Expect = 1e-58 Identities = 198/667 (29%), Positives = 269/667 (40%), Gaps = 93/667 (13%) Query: 4 SWGAEARELLTPGSRGLVRVLGGPGTGKSALLVQXXXXXXXXXX----DPESVLLLTGSG 59 SW E E G +V G GTG S+ L+ DP +L++ S Sbjct: 14 SWPVELPE------SGTWKVTGAAGTGVSSFLIDTVIHALDKARQTGADPSGILVIAPSK 67 Query: 60 RMGMWARSSLTTALLRSHTTGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTS 119 G R L+ L A + +VRSVHS A+A+LR E RL+T Sbjct: 68 ESGARLRRELSERL--------EDYAAQTSMVRSVHSLAFALLRTTTEEE----LRLITG 115 Query: 120 AEQDAIIRELLAGDLEDGPSARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELE 179 AEQDA+IRELL G EDG +WP + PAL GFA +LR+ L R ERG+ P +LE Sbjct: 116 AEQDAVIRELLTGQAEDG---HGSWPAEMRPALEYVGFARQLRDFLLRSIERGLGPGDLE 172 Query: 180 RLGRRSGRPEWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDP 239 RLG GRP W+AAG F R+YE+V LL + A + AAELV + L+ Sbjct: 173 RLGAEHGRPMWSAAGEFLREYERVQLL----------SRAHSYSAAELVTAVLQ------ 216 Query: 240 XXXXXXXXXXXXXXVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXX 299 VDDAQ LDP A +L+ +A A ++ GD +Q+VF Sbjct: 217 RPQLLREHPFHTIIVDDAQLLDPTAGKLIREMAPQANLVVVGGDADQSVFAFRGASSRFL 276 Query: 300 XXXXXXXXXAVTLTMSHRC-APAVARAVSGIARR---LPGGSAGRHIDGTGTEDGSVTVX 355 + LT HR +PA V R + RH++ Sbjct: 277 RDFPADHD--IELTEPHRTPSPACISIVDSDGRLRDVVANTVRRRHLE------------ 322 Query: 356 XXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPI 415 DGVPW +AVI I P Sbjct: 323 ----------------------DGVPWRDIAVI-VRSTGDIGQMRRTLLAAGVPVHISPT 359 Query: 416 GGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPV-XXXXXXXXXXXAVAGR 474 LAE+ + + L+TGP+G DPV R Sbjct: 360 DVVLAEQRLVSAVLLALRALEEDLSNSELEELLTGPVGGADPVTLRRLIRGLRRWDSTTR 419 Query: 475 SPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYI 534 + LL L + + Q ++ +G + Sbjct: 420 GIDSLRGLLYGELPD---------FNGQLTEREYSILERVRAVLSAGRDALASGDSVEEV 470 Query: 535 LWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEH 594 LWA W + L NR A+ RGG G QA R+L+A+ ALFD YV R +SL L H Sbjct: 471 LWAVWSATELDNRLQASALRGGATGSQADRDLDAMMALFDAAGDYVERRPDSSLRAFLTH 530 Query: 595 VAALQLPR-VSEEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQ 653 + +LP V + A + V +L+AH A+G EWD V++AG Q+G WP+ G + + Sbjct: 531 ITEQELPTGVRDRRTAIPQAVEILTAHGAVGREWDTVIVAGAQEGSWPSLGETGSIFGQE 590 Query: 654 RLLDELD 660 L+D LD Sbjct: 591 DLIDLLD 597 Score = 104 bits (259), Expect = 8e-20 Identities = 85/305 (27%), Positives = 130/305 (42%), Gaps = 25/305 (8%) Query: 761 DAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCP 820 + R+ AA QLARLA A + GA P W V+ L+ +G +L+PS ++ L +CP Sbjct: 729 EVERKQAARQLARLAAADIPGAHPEQWWSARSVAAEMPLHTSG---SLSPSRVEALLNCP 785 Query: 821 LRWLAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEA-----DW 875 L+ + + G++ HA G + AE A++ + FE W Sbjct: 786 LKAVLGNVAEDPSTEEHLLRGTLAHAFFEAIGRGMD---AEKAKLLVMEAFERIQDVPQW 842 Query: 876 FSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLE 935 L ++ EW Q+ GVEI + GV + +R+ G +DRL Sbjct: 843 QLRFRLDEFSTLLDRAREWARQSEVNQELAGVEIPV-GVRVSEE-----VRIGGYMDRLL 896 Query: 936 RDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXR-------L 988 RDG G ++VD+KT ++ +K + + + QL YQL L Sbjct: 897 RDGEGNYLVVDLKTGRSKPAKKEGEDHVQLMTYQLALAHGAFDGHQVHDGEGMPRQGGVL 956 Query: 989 VYPGKSAAAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSC 1048 VYPG + + Q +P A +++ L+ E GP AR N C CPIR C Sbjct: 957 VYPG-ATTKKIGEIWQSDKSPEALEEFAALLPPLVEEMRGPRITARTNKDCDKCPIRSIC 1015 Query: 1049 PAHTD 1053 P + Sbjct: 1016 PVQEE 1020 >tr|A3TGM2|A3TGM2_9MICO Tax_Id=313589 SubName: Full=Putative ATP-dependent DNA helicase;[Janibacter sp. HTCC2649] Length = 1047 Score = 232 bits (592), Expect = 2e-58 Identities = 206/670 (30%), Positives = 268/670 (40%), Gaps = 56/670 (8%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G++RVLG PGTGKS + V+ P+ LLL S R A LR Sbjct: 31 GVLRVLGAPGTGKSTIAVELVAAHVADGVRPDQCLLLASSRR---------DAARLRDQV 81 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGP 138 T EPL R+ S+ + VLR AA GD PPRLL+ EQD ++RELLAG G Sbjct: 82 TARVGGTSTEPLARTFPSFGFGVLRAAAALDGDPPPRLLSGPEQDVVLRELLAGHAS-GE 140 Query: 139 SARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFAR 198 S WP + AL T F ELR+LL R E G+DP +L LG R GR EW A R Sbjct: 141 SVGPRWPERVKLALPTRAFRAELRDLLMRAVELGLDPDDLLELGVRHGRDEWVAGAELLR 200 Query: 199 QYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQ 258 +Y++V L TP A PA ++G+A A A D VDDAQ Sbjct: 201 EYDEVTAL------LTPGAFDPAW----ILGAAASALAGDDDLARSLTAGLRLVVVDDAQ 250 Query: 259 QLDPQAARLVEVL--AAGAEFALIAGDPNQA--VFXXXXXXXXXXXXXXXXXXXAVTLTM 314 ++ P A RL+EVL A A ++ GDP+ A F V L Sbjct: 251 EMTPAALRLLEVLRHVAPAAGIVLIGDPDSATQTFRGGDPTLLAREWAVLGDGPTVVLPR 310 Query: 315 SHRCAPAVARAVSGIARRLP--GGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXXX 372 SHR + + +A + G A R + E GS V Sbjct: 311 SHRLPEGLLSVTNAVAGHIGVLGDVAHRRAEAC-VEGGSSEVHLLRSASQEAGFIAARLR 369 Query: 373 XXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXXX 432 +D VPWS MAVI S P+ + AE P Sbjct: 370 AAHLLDDVPWSDMAVI------VRGQSRSAGLRRALQSSGVPVSAAEAELPVRDEPSVRP 423 Query: 433 XXXXXXXNADQALA------------LITGPIGRVDPVXXXXXXXXXXXAVAGRSPEDFG 480 AD AL ++ P+G DPV Sbjct: 424 LLTLLQVVADLALGRAEDVPVDVALDVLVSPLGAADPVELRRLRRALRREELDAGGSRTS 483 Query: 481 DLLVATLSEDGRPAV----GSAG-SNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYIL 535 D L+A + RPAV G G S Q G G IL Sbjct: 484 DELIAEVLL--RPAVHDRLGIEGRSVQRIGRMIRAGVEACGAVEGEWG---PGVSAEGIL 538 Query: 536 WAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHV 595 WA W S L +W GG AG + R+L+AV A+ Y R G+S L+HV Sbjct: 539 WAMWDASRLAGQWRETALGGGAAGARTDRDLDAVLAVLRAAATYGERLPGSSPEAFLQHV 598 Query: 596 AALQLPRVSEEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQR 654 +P + A E V +L+ +A G +W LVV+AG+Q+G WP+ RG +L +Q Sbjct: 599 LGQDVPGDTLAARAPTGESVSLLTPQSAAGRQWPLVVVAGVQEGSWPDLRLRGSLLGSQD 658 Query: 655 LLDELDGVSG 664 L+D + G +G Sbjct: 659 LVDVVRGRAG 668 Score = 118 bits (295), Expect = 5e-24 Identities = 92/304 (30%), Positives = 131/304 (43%), Gaps = 12/304 (3%) Query: 756 DGAVDDAARQCAA-TQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQ 814 D DD R+ A T LARLA+AGV GADPA W L +S G D V + PS + Sbjct: 746 DVVSDDMRRRGGAITGLARLARAGVPGADPASWWVLHGLSDERPRRGPADPVRVGPSAID 805 Query: 815 TLNDCPLRWLAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEAD 874 C L+W + GG P + IG+++H + AE A + A L W L Sbjct: 806 GFTSCQLKWALTKVGGDGPMIGQRDIGTLIHEIAAEGDADAATMRATLDERWPRLGLPQG 865 Query: 875 WFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRL 934 W S +L R +A + V+ + E T VG + + + G I L G VDRL Sbjct: 866 W--STDLKRRQA--EGMVDRLARFFDENTAVGWQ--RLAAESRMKVELGRIVLSGTVDRL 919 Query: 935 ERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQL---XXXXXXXXXXXXXXXXRLVYP 991 + +G + ++D KT + D ++ QL YQL L++ Sbjct: 920 DVSPSGEVRVIDYKTGSSKPKASDVPRHGQLGAYQLAVIEGGFEDVEVPQSSSGAALLHV 979 Query: 992 GKSAAAGAAQRDQDPLTPAARDQW-RNLVRQAAEAAAGPHFIARRNDG-CSHCPIRPSCP 1049 GK+A + Q PL W L+ E G ++A +D C CP+R SCP Sbjct: 980 GKAAGKATTMQVQPPLAEDEDPGWAERLIVDTGELMGGATYVATPSDDLCRTCPVRSSCP 1039 Query: 1050 AHTD 1053 A + Sbjct: 1040 AQPE 1043 >tr|Q4JTS1|Q4JTS1_CORJK Tax_Id=306537 SubName: Full=Putative ATP-dependent DNA helicase II;[Corynebacterium jeikeium] Length = 1104 Score = 232 bits (591), Expect = 2e-58 Identities = 191/670 (28%), Positives = 268/670 (40%), Gaps = 51/670 (7%) Query: 23 VLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHTTGTG 82 VLGGPGTGK++LL+ ++ S R++L + G G Sbjct: 38 VLGGPGTGKTSLLISAARDFLLQGGSASEIMFFAPSKESATAVRAALYQRM-----AGEG 92 Query: 83 RAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSARS 142 A VRSVHS+A+A R G PRL+T AE D IRE+L G EDG Sbjct: 93 DYAASGTFVRSVHSWAFAFYRSVQTLRGQKQPRLITGAEHDMQIREILRGTEEDG---NR 149 Query: 143 AWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQYEQ 202 WP +++PAL+ AGFA +LR+LL R ERG+ +L++LG RP W AAGRF ++Y+Q Sbjct: 150 YWPTNVVPALSYAGFAQQLRDLLLRATERGLSAQQLQQLGVEHDRPMWEAAGRFQQEYQQ 209 Query: 203 VMLLRAAVGTATPQATAPALGAAELVGSALEAF--ASDPXXXXXXXXXXXXXXVDDAQQL 260 V L + + +L A+EL+ + L AF VDDA L Sbjct: 210 VQRL----------SRSESLNASELLHATLAAFEKPEGEQLVEQQREKVKLLLVDDAHNL 259 Query: 261 DPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTMSHRCAP 320 DP +ARL+E LIAGDP+Q VF V L+ SHR P Sbjct: 260 DPASARLIESFMVPGTRTLIAGDPDQCVFHFRGADEAFLDSYSQDPDHRVVLSASHRLTP 319 Query: 321 AVARAVSGIAR---------RLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXX 371 A++V+ + R L +G G T +V V Sbjct: 320 PAAQSVNALRRHLGAQPSRVELRSADSGDFTSGGSTGAETVQVTITPTETAERLKIVDVV 379 Query: 372 XXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXX 431 V W +AVI + P LAE+P Sbjct: 380 RRAHIEQQVAWDDIAVI-VRGTGSIARVRRTLMAYGVPVKVDPTSVVLAEQPLVRMLLLA 438 Query: 432 XXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAV--AGRSPEDFGDLLVATL-- 487 + +++ G +G DPV A+ A + + G TL Sbjct: 439 AEASYRPLTVAEMQSVLEGSVGGADPVMVRRVHRAVALAIRSAQMAGQVAGQAAGQTLRA 498 Query: 488 SEDGRPAVG----SAGSNQPPGP-------QFGP-----XXXXXXXXXXXXXCHRAGQDP 531 EDGRP + N P P GP + Q Sbjct: 499 HEDGRPFQAADYVTELLNHPEDPANQWITSHCGPREKEVIQRVSTVLEAGRQAWKNNQGT 558 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 +LW W + L A +GG G QA +L+AV +LFDI + R A + Sbjct: 559 EMVLWKIWQATKLDMHLRAQALKGGSLGAQADADLDAVMSLFDILGDFAERNPHAQMESF 618 Query: 592 LEHVAALQLPRVS-EEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVL 650 +E++ A ++P ++ + V +L AHAA G +W +V IAG+Q+G WP GG+ Sbjct: 619 VENLRAQKVPTGGRDQRGVRAGAVEILPAHAAAGRQWKVVAIAGVQEGEWPTGPTVGGLF 678 Query: 651 ATQRLLDELD 660 L+D LD Sbjct: 679 GQLELVDLLD 688 Score = 116 bits (291), Expect = 1e-23 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 12/298 (4%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 R+ AA LA++A+AGV GA P W G ST A + AGD + L+PS L++ N C LR Sbjct: 806 RRAAARNLAKMARAGVYGAAPEDWWGTAEPSTDARVL-AGDKIRLSPSKLESWNTCALRA 864 Query: 824 LAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEAD---WFSSNE 880 + +GG + +G +HA+ + E A+LA V ++LP D W ++ Sbjct: 865 FLDSNGGVSESTEAMRVGIFIHAIAEQIVQGMELDEAQLA-VREILPHVLDGPAWKNTQT 923 Query: 881 LARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAG 940 + R + + R + E+ E + + DG + L GR D L + Sbjct: 924 VERWEGGVNKLHGFIAGYRDKEFELETERTLRARVGQT-PDGVEVTLSGRADLLATNPED 982 Query: 941 RLV-IVDIKTAKTPVSKDDAQQNAQLAMYQ----LXXXXXXXXXXXXXXXXRLVYPGKSA 995 L ++D KT KT V+K+ A ++ QL+ YQ L LVYPG Sbjct: 983 GLTKVIDFKTGKTAVTKNAAAESPQLSAYQFLLPLNERSGGSAQKYRPGGAALVYPGTQT 1042 Query: 996 AAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 +R+Q LT + + + A AGP ++A NDGC HC + CPA + Sbjct: 1043 KT-ITERNQAELTEEQLSGVHDQLMEIAPVTAGPTYLATPNDGCRHCDFKTICPAQDE 1099 >tr|B1VFC4|B1VFC4_CORU7 Tax_Id=504474 SubName: Full=Putative ATP-dependent DNA helicase II;[Corynebacterium urealyticum] Length = 1188 Score = 230 bits (587), Expect = 7e-58 Identities = 196/688 (28%), Positives = 271/688 (39%), Gaps = 73/688 (10%) Query: 23 VLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHTTGTG 82 VLGGPGTGK++LLV E V+++T + A +++ T L+ + + Sbjct: 68 VLGGPGTGKTSLLVDTLVHFLAAGGSAEEVMVVTPTKD----AATAVNTQLVARLASMSS 123 Query: 83 RAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSARS 142 AA R P VRSVHS+A+A LR + PRLLT AE DA +R LLAG +EDG A Sbjct: 124 FAATRTP-VRSVHSWAFAALRSMLLASDREAPRLLTGAEHDADVRLLLAGHVEDGAGA-- 180 Query: 143 AWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQYEQ 202 WP+H+ PAL GFA +LR+LL R ERGV P EL LG + +P W AG+F +Y Q Sbjct: 181 -WPKHIRPALGYVGFARQLRDLLLRAEERGVGPGELTALGEKYDQPMWVGAGQFLDEYRQ 239 Query: 203 VMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXV--DDAQQL 260 L ++ +L A+EL+ + L+ A P + DDA L Sbjct: 240 TRRLAQSI----------SLNASELLHTTLQEMADGPGRAQLDRWREKLRLILIDDAHNL 289 Query: 261 DPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTMSHRCAP 320 DP AA +E ++AGDP+Q VF V L+ S R Sbjct: 290 DPAAAEFLEQFFTPETRVVLAGDPDQCVFHFRGADEELLSKYAADENHRVVLSGSQRFGA 349 Query: 321 AVARAVSGIA-------RRLP------------------------GGSAGRHIDGTGTED 349 ARA++ + R+P G AG G + Sbjct: 350 PTARAINALTGHLPHVDTRIPLRVAEGAEAAQEAEATAGELVAPDAGRAGATSGAGGERN 409 Query: 350 GSVTVXXXXXXXXXXXXXXXXXXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXX 409 + V DGV W MAVI Sbjct: 410 QPIRVLRANSGTAERLHITDALRRAHVRDGVAWQDMAVIVRSVGEIAPIRRALLTHGVPV 469 Query: 410 XSIPPIGGSLAEEPXXXXXXXXXXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXX 469 + LAE+P + L+ +G DP+ Sbjct: 470 R-VDQTSIILAEQPLIRLLLTALEATYRPLENSEVRVLMESMVGGADPIMVRRLERVLAQ 528 Query: 470 AVAGR-----------------SPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPXX 512 A+A + S + LL T S + A +AG N + Sbjct: 529 ALARQRLQGKPVPENTAGLPFQSSDALSTLLNGTASAEDA-AEWTAGFNNR---ELQILQ 584 Query: 513 XXXXXXXXXXXCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTAL 572 RAGQ +LW W +GL R RGG G QA ++L++V L Sbjct: 585 DMSDVLTAGREAQRAGQSVEMVLWEIWKATGLDTRLQERALRGGTFGSQADQDLDSVMML 644 Query: 573 FDITDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVAQNEQVRVLSAHAALGHEWDLVVI 632 FD+ +V R AS+ E V A +LP E + V +L AHAA+G +W VV+ Sbjct: 645 FDMAGDFVERHPNASIRTFCEEVRAQELPTGGRERGVASNAVEILPAHAAVGRQWHTVVV 704 Query: 633 AGLQDGLWPNTIPRGGVLATQRLLDELD 660 +Q+G WP GG+ L+D LD Sbjct: 705 TRVQEGSWPAGPTVGGLFGQLELVDLLD 732 Score = 99.4 bits (246), Expect = 2e-18 Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 21/298 (7%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 R AA LA +A+AG+ G+ P W G+ +T + V+L+PS L +++C L+ Sbjct: 891 RVAAARNLAAMAEAGIFGSHPVDWWGMAEPTTMERVTDRRGGVSLSPSKLDNIDNCALKT 950 Query: 824 LAERHGGTNPRDLRATIGSVLHAL---IAEPGASEE--QLLAELARVWKLL--PFEADWF 876 + + G +G+V+HA+ I + S E Q A A W ++ FE Sbjct: 951 FFDDNRGAQEETNPMRVGTVVHAIAQAIVQQDLSLEDAQYAARTALKWAVVGPAFEV--- 1007 Query: 877 SSNELARHRAMIQAFVEWRGQ--TRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRL 934 + L R I W + T++E TE VE +D L G + LRGR+D + Sbjct: 1008 -NAALERWEQGIANLHSWITETCTQTEGTEWEVEQQLDTTL-GTLPTGEEVFLRGRIDLM 1065 Query: 935 ERDGAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQLXXXXXXXXXXXXXXXXRLVYPGKS 994 D GR+V+ D KT KTP + +AQ + QL YQ L+YP S Sbjct: 1066 ATDADGRVVVYDFKTGKTPKTAAEAQASRQLGAYQF---LVHVNRGKQPYGAHLIYPATS 1122 Query: 995 AAAGAAQRDQDP-LTPAARDQWRNLVRQAAEAAAGPHFIARRNDG-CSHCPIRPSCPA 1050 G ++ P +P + R + AAE + P IA D C +C CPA Sbjct: 1123 --EGKLKKSSQPDFSPEQLAETRQNLLAAAEQISEPVQIATPGDAQCKYCSYHLICPA 1178 >tr|C8RQU9|C8RQU9_CORJE Tax_Id=525262 SubName: Full=ATP-dependent DNA helicase II;[Corynebacterium jeikeium ATCC 43734] Length = 1136 Score = 229 bits (583), Expect = 2e-57 Identities = 190/670 (28%), Positives = 268/670 (40%), Gaps = 51/670 (7%) Query: 23 VLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHTTGTG 82 VLGGPGTGK++LL+ ++ S R++L + G G Sbjct: 70 VLGGPGTGKTSLLISAARDFLLQGGSASEIMFFAPSKESATAVRAALYQRM-----AGEG 124 Query: 83 RAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGPSARS 142 A VRSVHS+A+A R G PRL+T AE D IRE+L G EDG Sbjct: 125 DYAASGTFVRSVHSWAFAFYRSVQTLRGQKQPRLITGAEHDMQIREILRGTEEDG---NR 181 Query: 143 AWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFARQYEQ 202 WP +++PAL+ AGFA +LR+LL R ERG+ +L++LG RP W AAGRF ++Y+Q Sbjct: 182 YWPTNVVPALSYAGFAQQLRDLLLRATERGLSAQQLQQLGVEHDRPMWEAAGRFQQEYQQ 241 Query: 203 VMLLRAAVGTATPQATAPALGAAELVGSALEAF--ASDPXXXXXXXXXXXXXXVDDAQQL 260 V L + + +L A+EL+ + L AF VDDA L Sbjct: 242 VQRL----------SRSESLNASELLHATLAAFEKPEGEQLVEQQREKVKLLLVDDAHNL 291 Query: 261 DPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXAVTLTMSHRCAP 320 DP +ARL+E LIAGDP+Q VF V L+ S+R P Sbjct: 292 DPASARLIESFMVPGTRTLIAGDPDQCVFHFRGADEAFLDSYSQDPDHRVVLSASYRLTP 351 Query: 321 AVARAVSGIAR---------RLPGGSAGRHIDGTGTEDGSVTVXXXXXXXXXXXXXXXXX 371 A++V+ + R L +G G T +V V Sbjct: 352 PAAQSVNALRRHLGAQPSRVELRSADSGDFTSGGSTGAETVQVTITPTETAERLKIVDVV 411 Query: 372 XXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXXX 431 V W +AVI + P LAE+P Sbjct: 412 RRAHIEQQVAWDDIAVI-VRGTGSIARVRRTLMAYGVPVKVDPTSVVLAEQPLARMLLLA 470 Query: 432 XXXXXXXXNADQALALITGPIGRVDPVXXXXXXXXXXXAV--AGRSPEDFGDLLVATL-- 487 + +++ G +G DPV A+ A + + G TL Sbjct: 471 AEASYRTLTVAEMHSVLEGSVGGADPVMVRRVHRAVALAIRSAQMAGQVAGQAAGQTLRA 530 Query: 488 SEDGRPAVG----SAGSNQPPGP-------QFGP-----XXXXXXXXXXXXXCHRAGQDP 531 EDGRP + N P P GP + Q Sbjct: 531 HEDGRPFQAADYVTELLNHPGDPANQWITSHCGPREKEVIQRVSTVLEAGRQAWKNNQGT 590 Query: 532 RYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGL 591 +LW W + L A +GG G QA +L+AV +LFDI + R A + Sbjct: 591 EMVLWKIWQATKLDMHLRAQALKGGSLGAQADADLDAVMSLFDILGDFAERNPHAQMESF 650 Query: 592 LEHVAALQLPRVS-EEPVAQNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVL 650 +E++ A ++P ++ + V +L AHAA G +W +V IAG+Q+G WP GG+ Sbjct: 651 VENLRAQKVPTGGRDQRGVRAGAVEILPAHAAAGRQWKVVAIAGVQEGEWPTGPTVGGLF 710 Query: 651 ATQRLLDELD 660 L+D LD Sbjct: 711 GQLELVDLLD 720 Score = 116 bits (291), Expect = 1e-23 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 12/298 (4%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 R+ AA LA++A+AGV GA P W G ST A + AGD + L+PS L++ N C LR Sbjct: 838 RRAAARNLAKMARAGVYGAAPEDWWGTAEPSTDARVL-AGDKIRLSPSKLESWNTCALRA 896 Query: 824 LAERHGGTNPRDLRATIGSVLHALIAEPGASEEQLLAELARVWKLLPFEAD---WFSSNE 880 + +GG + +G +HA+ + E A+LA V ++LP D W ++ Sbjct: 897 FLDSNGGVSESTEAMRVGIFIHAIAEQIVQGMELDEAQLA-VREILPHVLDGPAWKNTQT 955 Query: 881 LARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLRGRVDRLERDGAG 940 + R + + R + E+ E + + DG + L GR D L + Sbjct: 956 VERWEGGVNKLHGFIAGYRDKEFELETERTLRARVGQT-PDGVEVTLSGRADLLATNPED 1014 Query: 941 RLV-IVDIKTAKTPVSKDDAQQNAQLAMYQ----LXXXXXXXXXXXXXXXXRLVYPGKSA 995 L ++D KT KT V+K+ A ++ QL+ YQ L LVYPG Sbjct: 1015 GLTKVIDFKTGKTAVTKNAAAESPQLSAYQFLLPLNERSGGSAQKYRPGGAALVYPGTQT 1074 Query: 996 AAGAAQRDQDPLTPAARDQWRNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCPAHTD 1053 +R+Q LT + + + A AGP ++A NDGC HC + CPA + Sbjct: 1075 KT-ITERNQAELTEEQLSGVHDQLMEIAPVTAGPTYLATPNDGCRHCDFKTICPAQDE 1131 >tr|C4DDU1|C4DDU1_9ACTO Tax_Id=446470 SubName: Full=DNA/RNA helicase, superfamily I;[Stackebrandtia nassauensis DSM 44728] Length = 1029 Score = 216 bits (550), Expect = 1e-53 Identities = 198/654 (30%), Positives = 264/654 (40%), Gaps = 54/654 (8%) Query: 19 GLVRVLGGPGTGKSALLVQXXXXXXXXXXDPESVLLLTGSGRMGMWARSSLTTALLRSHT 78 G + V GGPGTGK+A+LV+ DP +L+L G GR G A LR Sbjct: 29 GPLLVQGGPGTGKTAVLVESVAARVKEGVDPADMLVL-GFGRRG--------AARLRRDI 79 Query: 79 TGTGRAAVREPLVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDAIIRELLAGDLEDGP 138 + E V S + A+AVLR AA R P+LL EQD IIRELLA D + Sbjct: 80 SARLARTGSEVPVYSFPALAFAVLRAAANRHDAPAPQLLKGPEQDVIIRELLAHDAVE-- 137 Query: 139 SARSAWPRHLLPALTTAGFATELRNLLARCAERGVDPMELERLGRRSGRPEWAAAGRFAR 198 WP + PAL T FA +LR+LL R ERG+ L RLGR RPEW AA F Sbjct: 138 -----WPEAVRPALGTRTFAAQLRDLLLRATERGISAPRLARLGREHDRPEWVAAADFMT 192 Query: 199 QYEQVMLLRAAVGTATPQATAPALGAAELVGSALEAFASDPXXXXXXXXXXXXXXVDDAQ 258 +Y V+ LR+ G AT +AE+V +A A DP VD+ Q Sbjct: 193 RYVDVLALRSLTGGAT-------YDSAEIVRAAASELADDP----ELVPPPKFTFVDEVQ 241 Query: 259 QLDPQAARLVEVLAAGAEFALIAGDPNQAVFXXXXXXXXXXXXXXXXXXXA-------VT 311 LDP L+ ++A + GD + A F A V Sbjct: 242 DLDPAQLELLRLVAGQGANLVAFGDADSATFGFRGADVRLLREFGDRFPTADGDPAPEVN 301 Query: 312 LTMSHRCAPAVARAVSGIARRLPGGSAGR-HIDGTGTEDGSVTVXXXXXXXXXXXXXXXX 370 L HR A A+ A S +A++L G R G V V Sbjct: 302 LATCHRSASALLNATSLVAKKLRGTDRFRARAPRPEVGAGQVEVAALRSAAQQAAYIARQ 361 Query: 371 XXXXXXVDGVPWSQMAVIXXXXXXXXXXXXXXXXXXXXXXSIPPIGGSLAEEPXXXXXXX 430 +GV WSQMAVI I I +L+ P Sbjct: 362 LRVAHLREGVAWSQMAVIVKSAAEHLPVVERALRHAGVPVEIAAIDQALSARPIVRHLLT 421 Query: 431 XXXXXXXXXNADQ--ALALITGPIGRVDPV----XXXXXXXXXXXAVAGRSPEDFGDLLV 484 + D+ A+AL+ G D + A RSP G+LLV Sbjct: 422 IIQCGLNPKSLDEDTAVALLHSVYGGADSLSERRLRQELRRLAHAADVFRSP---GELLV 478 Query: 485 ATLSEDGRPAVGSAGSNQPPGPQFGPXXXXXXXXXXXXXCHRAGQDPRYILWAAWHRSGL 544 L + PA +A P P P + +D +LWA W R+ L Sbjct: 479 EALRD---PAELTA---LPEEPWAEPPRRIAGLMECVRSATGSVED---VLWAVWERADL 529 Query: 545 QNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSRTSGASLSGLLEHVAALQLPRVS 604 R V A +L+A+ LFD + R GA HV LP + Sbjct: 530 SRRLARRAVSRDSRAVAADGDLDAMMTLFDWAADFADRLPGAGADVFAAHVLEQVLPADT 589 Query: 605 EEPVA-QNEQVRVLSAHAALGHEWDLVVIAGLQDGLWPNTIPRGGVLATQRLLD 657 A + E V++L+AH+A G +WDLVV+AG+Q+G WPN PRG ++ ++ L++ Sbjct: 590 RAAQARRGETVQLLTAHSAKGLQWDLVVVAGVQEGTWPNLRPRGSIMGSEALVE 643 Score = 158 bits (399), Expect = 4e-36 Identities = 105/294 (35%), Positives = 141/294 (47%), Gaps = 15/294 (5%) Query: 764 RQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLRW 823 + A QL+ LAK V GADP W GL P+S A L G+ V ++PST++ + C LRW Sbjct: 731 KDAAIAQLSVLAKQAVPGADPEEWWGLRPISDHAPLILPGERVKVSPSTVELVEQCGLRW 790 Query: 824 LAERHGGTNPRDLRATIGSVLHALIAEPGASEE--QLLAE-LARVWKLLPFEADWFSSNE 880 + ERHGGT P L IG+++HA +++ Q +A+ +A+ LPFEA W + + Sbjct: 791 MLERHGGTEPSGLPQEIGNLVHAAAEAAAVTDDPRQAMADFVAQHLAKLPFEAPWKAKQD 850 Query: 881 LARHRAMIQAFVEWRGQTRSELTEVGVEIDI---DGVLDAARDDGGAIRLRGRVDRLERD 937 R R+M+ F W +L + DG G L G VDRLERD Sbjct: 851 SERVRSMVDKFASWLESNNRDLVAAEKRFTVKLPDG------PPGVTTELSGAVDRLERD 904 Query: 938 GAGRLVIVDIKTAKTPVSKDDAQQNAQLAMYQL-XXXXXXXXXXXXXXXXRLVYPGKSAA 996 GRL +VDIKT KTP+S +A+ N QLA YQ+ LVYP S Sbjct: 905 LHGRLHVVDIKTGKTPISAAEAETNPQLAAYQVAVEAGAFAEHGLEAGGATLVYPASSTK 964 Query: 997 AGAAQRDQDPLTPAARDQW-RNLVRQAAEAAAGPHFIARRNDGCSHCPIRPSCP 1049 A A+ R+Q L W V + AE F A C C ++ CP Sbjct: 965 A-ASVREQPALPSVDDPSWAHRKVLKVAETMTASTFTAVNTRKCDTCAVKQCCP 1017 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.317 0.133 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 6,489,795,575 Number of extensions: 236116853 Number of successful extensions: 663513 Number of sequences better than 10.0: 855 Number of HSP's gapped: 664586 Number of HSP's successfully gapped: 1059 Length of query: 1057 Length of database: 3,846,993,858 Length adjustment: 148 Effective length of query: 909 Effective length of database: 2,178,263,814 Effective search space: 1980041806926 Effective search space used: 1980041806926 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 86 (37.7 bits)