BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1359 (1101 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HFH3|B2HFH3_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent... 1935 0.0 tr|A0PR94|A0PR94_MYCUA Tax_Id=362242 SubName: Full=ATP-dependent... 1919 0.0 tr|Q7TX12|Q7TX12_MYCBO Tax_Id=1765 SubName: Full=PROBABLE ATP-DE... 1538 0.0 tr|O53347|O53347_MYCTU Tax_Id=1773 SubName: Full=Helicase, UvrD/... 1538 0.0 tr|C6DXE1|C6DXE1_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent... 1538 0.0 tr|C1AGX0|C1AGX0_MYCBT Tax_Id=561275 SubName: Full=Putative ATP-... 1538 0.0 tr|A5U7M1|A5U7M1_MYCTA Tax_Id=419947 SubName: Full=UvrD/Rep fami... 1538 0.0 tr|A1KNJ9|A1KNJ9_MYCBP Tax_Id=410289 SubName: Full=Probable ATP-... 1538 0.0 tr|A5WSB0|A5WSB0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 1538 0.0 tr|A4KL97|A4KL97_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 1538 0.0 tr|Q73UR6|Q73UR6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 1523 0.0 tr|A0QK57|A0QK57_MYCA1 Tax_Id=243243 SubName: Full=Superfamily p... 1516 0.0 tr|A0QTS0|A0QTS0_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent... 1361 0.0 tr|Q1BC68|Q1BC68_MYCSS Tax_Id=164756 SubName: Full=UvrD/REP heli... 1335 0.0 tr|A1UCS6|A1UCS6_MYCSK Tax_Id=189918 SubName: Full=UvrD/REP heli... 1335 0.0 tr|A3PWI2|A3PWI2_MYCSJ Tax_Id=164757 SubName: Full=UvrD/REP heli... 1332 0.0 tr|A4TFE0|A4TFE0_MYCGI Tax_Id=350054 SubName: Full=UvrD/REP heli... 1296 0.0 tr|A1T624|A1T624_MYCVP Tax_Id=350058 SubName: Full=UvrD/REP heli... 1295 0.0 tr|B1MEY5|B1MEY5_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-... 1142 0.0 tr|C1B1J0|C1B1J0_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-... 1035 0.0 tr|Q0S2T3|Q0S2T3_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-... 1032 0.0 tr|C0ZX42|C0ZX42_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-... 1010 0.0 tr|C3JKU1|C3JKU1_RHOER Tax_Id=596309 SubName: Full=UvrD/REP heli... 1006 0.0 tr|C2ARP9|C2ARP9_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helic... 915 0.0 tr|D0LEA1|D0LEA1_GORB4 Tax_Id=526226 SubName: Full=UvrD/REP heli... 899 0.0 tr|A4F8N5|A4F8N5_SACEN Tax_Id=405948 SubName: Full=Probable ATP-... 837 0.0 tr|C7MVN3|C7MVN3_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helic... 816 0.0 tr|C8XJ57|C8XJ57_NAKMY Tax_Id=479431 SubName: Full=UvrD/REP heli... 759 0.0 tr|Q5YR02|Q5YR02_NOCFA Tax_Id=37329 SubName: Full=Putative DNA h... 754 0.0 tr|A4XB80|A4XB80_SALTO Tax_Id=369723 SubName: Full=UvrD/REP heli... 731 0.0 tr|A8M3F7|A8M3F7_SALAI Tax_Id=391037 SubName: Full=UvrD/REP heli... 728 0.0 tr|Q47SK5|Q47SK5_THEFY Tax_Id=269800 SubName: Full=Putative DNA ... 664 0.0 tr|C0U8Y0|C0U8Y0_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helic... 662 0.0 tr|C4DDU0|C4DDU0_9ACTO Tax_Id=446470 SubName: Full=DNA/RNA helic... 651 0.0 tr|Q8FRH0|Q8FRH0_COREF Tax_Id=152794 SubName: Full=Putative ATP-... 650 0.0 tr|C8NLR1|C8NLR1_COREF Tax_Id=196164 SubName: Full=Probable dna ... 648 0.0 tr|C6WM78|C6WM78_ACTMD Tax_Id=446462 SubName: Full=UvrD/REP heli... 648 0.0 tr|Q8NSA3|Q8NSA3_CORGL Tax_Id=1718 SubName: Full=Superfamily I D... 644 0.0 tr|Q6M705|Q6M705_CORGL Tax_Id=1718 SubName: Full=PROBABLE DNA HE... 644 0.0 tr|A4QCB1|A4QCB1_CORGB Tax_Id=340322 SubName: Full=Putative unch... 643 0.0 tr|A6W771|A6W771_KINRD Tax_Id=266940 SubName: Full=UvrD/REP heli... 640 0.0 tr|D1ACM7|D1ACM7_THECU Tax_Id=471852 SubName: Full=UvrD/REP heli... 636 e-180 tr|C5VEC6|C5VEC6_9CORY Tax_Id=553207 SubName: Full=ATP-dependent... 636 e-180 tr|Q6NIP5|Q6NIP5_CORDI Tax_Id=1717 SubName: Full=Putative helica... 634 e-179 tr|C0E159|C0E159_9CORY Tax_Id=566549 SubName: Full=Putative unch... 634 e-179 tr|D1BXK8|D1BXK8_9MICO Tax_Id=446471 SubName: Full=UvrD/REP heli... 630 e-178 tr|C1RP66|C1RP66_9CELL Tax_Id=446466 SubName: Full=DNA/RNA helic... 619 e-175 tr|C3PEP2|C3PEP2_CORA7 Tax_Id=548476 SubName: Full=Putative ATP-... 597 e-168 tr|Q2J6E3|Q2J6E3_FRASC Tax_Id=106370 SubName: Full=UvrD/REP heli... 588 e-165 tr|D1BAW5|D1BAW5_9MICO Tax_Id=446469 SubName: Full=DNA/RNA helic... 582 e-163 >tr|B2HFH3|B2HFH3_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium marinum] Length = 1101 Score = 1936 bits (5014), Expect = 0.0 Identities = 990/1101 (89%), Positives = 990/1101 (89%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY Sbjct: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLR 120 AEPGQVLGLTFTRKAAGQ STYHAFAGSLLR Sbjct: 61 AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGEAAGAPTVSTYHAFAGSLLR 120 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV Sbjct: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 Query: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA Sbjct: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 Query: 241 AKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 AKVMDFGMQM TCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD Sbjct: 241 AKVMDFGMQMAAAARLAATCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 Query: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN Sbjct: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 Query: 361 AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP 420 AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP Sbjct: 361 AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP 420 Query: 421 PTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA 480 PTAAVLVRRN RGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA Sbjct: 421 PTAAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA 480 Query: 481 MRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICD 540 MRVLTGPRWRLGGSD GGPQ CLADAICD Sbjct: 481 MRVLTGPRWRLGGSDVAALWRRAVALVGGPQVGASASPGAVAAAAGPDTDTACLADAICD 540 Query: 541 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXX 600 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVR Sbjct: 541 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAW 600 Query: 601 XXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR 660 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR Sbjct: 601 AGAEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR 660 Query: 661 DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG 720 DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG Sbjct: 661 DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG 720 Query: 721 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG 780 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG Sbjct: 721 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG 780 Query: 781 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA 840 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA Sbjct: 781 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA 840 Query: 841 TRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPTRAL 900 TRRGDVERGARLVAEAIS IEGWTADVDALLAERARAVGPPTRAL Sbjct: 841 TRRGDVERGARLVAEAISADAGVEAPAGGAAVADIEGWTADVDALLAERARAVGPPTRAL 900 Query: 901 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL 960 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL Sbjct: 901 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL 960 Query: 961 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG 1020 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG Sbjct: 961 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG 1020 Query: 1021 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD 1080 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD Sbjct: 1021 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD 1080 Query: 1081 ELPDGMALAELLADSDPPCSC 1101 ELPDGMALAELLADSDPPCSC Sbjct: 1081 ELPDGMALAELLADSDPPCSC 1101 >tr|A0PR94|A0PR94_MYCUA Tax_Id=362242 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium ulcerans] Length = 1101 Score = 1919 bits (4972), Expect = 0.0 Identities = 982/1101 (89%), Positives = 983/1101 (89%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY Sbjct: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLR 120 AEPGQVLGLTFTRKAAGQ STYHAFAGSLLR Sbjct: 61 AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGEAAGAPTVSTYHAFAGSLLR 120 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV Sbjct: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 Query: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRML TQTERAELVPLLDALHERMRA Sbjct: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLVTQTERAELVPLLDALHERMRA 240 Query: 241 AKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 AKVMDFGMQM TCPQVG ELRSRYRVVLLDEYQDTGHSQR+ALSALFGGGVDD Sbjct: 241 AKVMDFGMQMAAAARLAATCPQVGGELRSRYRVVLLDEYQDTGHSQRIALSALFGGGVDD 300 Query: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN Sbjct: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 Query: 361 AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP 420 AISAE RRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP Sbjct: 361 AISAEPRRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP 420 Query: 421 PTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA 480 PTAAVLVRRN RGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA Sbjct: 421 PTAAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA 480 Query: 481 MRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICD 540 MRVLTGPRWRLGGSD GGPQ CLADAICD Sbjct: 481 MRVLTGPRWRLGGSDVAALWRRAVALVGGPQVGASVSPGAVAAAAGPDTDTACLADAICD 540 Query: 541 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXX 600 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVR Sbjct: 541 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAW 600 Query: 601 XXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR 660 EHLDAFADVVADYAER AISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR Sbjct: 601 AGAEHLDAFADVVADYAERTAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR 660 Query: 661 DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG 720 D VQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG Sbjct: 661 DGVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG 720 Query: 721 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG 780 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG Sbjct: 721 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG 780 Query: 781 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA 840 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWD APVAGERNPLLDDVVEAVWPTDPLA Sbjct: 781 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDRAPVAGERNPLLDDVVEAVWPTDPLA 840 Query: 841 TRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPTRAL 900 TRRGDVERGARLVAEAIS IEGWTADVDALLAERARAVGPPTRAL Sbjct: 841 TRRGDVERGARLVAEAISADAGVEAPAGGAAVADIEGWTADVDALLAERARAVGPPTRAL 900 Query: 901 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL 960 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGN FHTWVQQFYGAELLFDLGDL Sbjct: 901 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNIFHTWVQQFYGAELLFDLGDL 960 Query: 961 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG 1020 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG Sbjct: 961 PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG 1020 Query: 1021 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD 1080 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD Sbjct: 1021 GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD 1080 Query: 1081 ELPDGMALAELLADSDPPCSC 1101 ELPDGMALAELLADSDPPCSC Sbjct: 1081 ELPDGMALAELLADSDPPCSC 1101 >tr|Q7TX12|Q7TX12_MYCBO Tax_Id=1765 SubName: Full=PROBABLE ATP-DEPENDENT DNA HELICASE; EC=3.6.1.-;[Mycobacterium bovis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|O53347|O53347_MYCTU Tax_Id=1773 SubName: Full=Helicase, UvrD/Rep family; SubName: Full=PROBABLE ATP-DEPENDENT DNA HELICASE; EC=3.6.1.-;[Mycobacterium tuberculosis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|C6DXE1|C6DXE1_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium tuberculosis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|C1AGX0|C1AGX0_MYCBT Tax_Id=561275 SubName: Full=Putative ATP-dependent DNA helicase;[Mycobacterium bovis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|A5U7M1|A5U7M1_MYCTA Tax_Id=419947 SubName: Full=UvrD/Rep family helicase;[Mycobacterium tuberculosis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|A1KNJ9|A1KNJ9_MYCBP Tax_Id=410289 SubName: Full=Probable ATP-dependent DNA helicase; EC=3.6.1.-;[Mycobacterium bovis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|A5WSB0|A5WSB0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ATP-dependent DNA helicase;[Mycobacterium tuberculosis] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|A4KL97|A4KL97_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ATP-dependent DNA helicase;[Mycobacterium tuberculosis str. Haarlem] Length = 1101 Score = 1538 bits (3981), Expect = 0.0 Identities = 808/1093 (73%), Positives = 861/1093 (78%), Gaps = 10/1093 (0%) Query: 4 RYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 RYSP E+A ALG+FPPT EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP Sbjct: 9 RYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHG 123 GQVLGLTFTRKAAGQ STYHAFAGSLLRD+G Sbjct: 69 GQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVV-STYHAFAGSLLRDYG 127 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 LLLP+EPDTRLLSETELWQLAF+VV+GY G LCT K+PAAVT+ V+RLWGQL EHLVDTR Sbjct: 128 LLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLGEHLVDTR 187 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 LRDTH+ELERLVHALPAG QRD GP+QWLLRMLATQT+RAELVPLLDAL ERM A KV Sbjct: 188 ALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGERMHAGKV 247 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLA 303 MDF MQM T PQVG++LR RYRVVLLDEYQDTGH+QRV LS+LFGGGVDDGLA Sbjct: 248 MDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGGGVDDGLA 307 Query: 304 LTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 LTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAPVLEL TSWRNPP+AL +AN IS Sbjct: 308 LTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQALRVANGIS 367 Query: 364 AEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 AEARRRSVAV ALR RPDAP G VRCALL DVQAER+WIAD L+ YQRA ADGV PPTA Sbjct: 368 AEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADGVKPPTA 427 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVRRN RGIP EVVGLAGLLSIPEVA++VAMLRLV DPTAGAAAMRV Sbjct: 428 AVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTAGAAAMRV 487 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGP 543 LTGPRWRLG D G + CLADAI DPG Sbjct: 488 LTGPRWRLGARDLAALWRRALTLSG--ESPSTASPESIAMAASADADNPCLADAISDPGS 545 Query: 544 ADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX 603 A+ YS AGY RIGALA EL+ALRG LGH LPDLVAEVRRVLG+DC+VR Sbjct: 546 AEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGP 605 Query: 604 EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRV 663 EHLDAFADVVA YAERA SA S++ASV GLLAYLDVA VENGLPPA+LTVA DRV Sbjct: 606 EHLDAFADVVAGYAERA-----SARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV 660 Query: 664 QVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPV 723 QVLTVHAAKGLEWQVVAVAHLS GVFPST SRSSWLTDP ELPPLLRGDRAS GA GIPV Sbjct: 661 QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV 720 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDTSAV +RKQLSD IS HR LD+RRVDEERRLLYV VTRAEDT+LVSGHHWG TG KP Sbjct: 721 LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP 780 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 RGPS+FLCELKDII+RSAAAGDPCG V+QW AP ERNPL D+ +EAVWP DPLA RR Sbjct: 781 RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR 840 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEG-WTADVDALLAERARAV-GPPTRALP 901 GDVERGA LVA A+S + W+ DVDALLAERA A G P R LP Sbjct: 841 GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP 900 Query: 902 NQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLP 961 N LSVS LVEL DPVGARQRL+ RLP RPDPHA LG+AFH WVQQFYGAELLFDLGDLP Sbjct: 901 NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP 960 Query: 962 GAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGG 1021 GAAD +VG E+LA LQ AF S WAARTP AVEVPFEMP+GDTVVRGRIDAVF DPDGG Sbjct: 961 GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG 1020 Query: 1022 ATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDE 1081 ATVVDWKTG+PP GP AMRQAAVQLAVYR+AWAALRGCP SSVRTAF+YVR+G+TV+PDE Sbjct: 1021 ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE 1080 Query: 1082 LPDGMALAELLAD 1094 LP LA LL D Sbjct: 1081 LPAPGELAMLLTD 1093 >tr|Q73UR6|Q73UR6_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 1096 Score = 1523 bits (3942), Expect = 0.0 Identities = 796/1107 (71%), Positives = 864/1107 (78%), Gaps = 22/1107 (1%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M+ RYSP E+A ALG+FPPT+EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGY Sbjct: 1 MSDRYSPRELACALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----STYHAFA 115 A PGQVLGLTFTRKAAGQ STYHAFA Sbjct: 61 AHPGQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFA 120 Query: 116 GSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQL 175 GSLLRD+GLLLP+EPDTRLLSETELWQLAF+VVN YRG L T KTPAAVT+ VLRLWGQL Sbjct: 121 GSLLRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQL 180 Query: 176 AEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALH 235 AEHLVDT QLR+TH+ELERLVHALPAGP QRD GP+QWLLR+ TQ+ERAELVPLL+AL Sbjct: 181 AEHLVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLLRLSGTQSERAELVPLLEALD 240 Query: 236 ERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFG 295 ERMRA KVMDFGMQM PQVG +LR RYRVVLLDEYQDTGH+QR+ALSALF Sbjct: 241 ERMRAVKVMDFGMQMASAARLVAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFA 300 Query: 296 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRA 355 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRF+TDF SDG PAPVLELRTSWRNPPR Sbjct: 301 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRT 360 Query: 356 LHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAA 415 L +ANAISAEARRRSVAVHALR RPDAP GTVRCALL DV AER+WIAD + HY+RA A Sbjct: 361 LRVANAISAEARRRSVAVHALRPRPDAPPGTVRCALLPDVVAEREWIADHIDAHYRRARA 420 Query: 416 DGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPT 475 DGVSPPTAAVLVRRN RGIPVEVVGLAGLLS+PEVA+LVAMLRLV DPT Sbjct: 421 DGVSPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPT 480 Query: 476 AGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG-----GPQXXXXXXXXXXXXXXXXXXX 530 AGAAAMRVLTGPRWRLG D G GP Sbjct: 481 AGAAAMRVLTGPRWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRNVEADAV 540 Query: 531 XXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDV 590 CLADAI DPGPA+ YS+AGY RI ALAAEL+ALR HL H L DLVA VRRV+ LDC+V Sbjct: 541 --CLADAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAVVRRVMDLDCEV 598 Query: 591 RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENG 650 R EHLDAFADVVA YAERA + G+ S ASV GLLA+LDVA VENG Sbjct: 599 RAAAAAGWAGT--EHLDAFADVVAGYAERAD-TGGTDASASASVAGLLAFLDVAESVENG 655 Query: 651 LPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLR 710 LP A L VARDRVQVLTVH+AKGLEWQ+VAVAHLS GVFPST ++++WLTD ELPPLLR Sbjct: 656 LPAAPLAVARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTDAAELPPLLR 715 Query: 711 GDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVL 770 GDRA GALGIPVLDTS VTNRKQLSD IS HR QL+QRRVDEERRLLYV VTRAEDT+L Sbjct: 716 GDRARPGALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLL 775 Query: 771 VSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVV 830 VSGHHW ATG+KPRGPSDFLCE+KD+I+ SAAAGDPCGTV+QW PAP GERNPL D+ V Sbjct: 776 VSGHHWAATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGERNPLRDNAV 835 Query: 831 EAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERA 890 EAVWP DPLA+RRG+VERGA LV +A++ +EGW ADVDALLAERA Sbjct: 836 EAVWPADPLASRRGEVERGAALVRQAMA-------AEPGDPGADVEGWAADVDALLAERA 888 Query: 891 RAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYG 950 R GPP +ALP QLSVS LV LARDP GA +RL HRLP+RP+PHA LGNAFH WVQ+FYG Sbjct: 889 RVTGPPPQALPGQLSVSSLVGLARDPAGAARRLRHRLPSRPEPHALLGNAFHAWVQKFYG 948 Query: 951 AELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGR 1010 AE LF+LGDLPGAADSDVG +LA LQ AF SPWAARTP+AVEVPFEMP+GDT+VRGR Sbjct: 949 AECLFELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGR 1008 Query: 1011 IDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHY 1070 IDAVF + DGGATVVDWKTG PP PEAMRQAAVQLAVYR+AWAAL PESSVRTAFHY Sbjct: 1009 IDAVFAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHY 1068 Query: 1071 VRTGVTVIPDELPDGMALAELLADSDP 1097 VR TV+P+ LP LA LLA + P Sbjct: 1069 VRARTTVVPEALPTSDELAGLLAPTAP 1095 >tr|A0QK57|A0QK57_MYCA1 Tax_Id=243243 SubName: Full=Superfamily protein I DNA and RNA helicases;[Mycobacterium avium] Length = 1096 Score = 1516 bits (3926), Expect = 0.0 Identities = 793/1107 (71%), Positives = 861/1107 (77%), Gaps = 22/1107 (1%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M+ RYSP E+A ALG+FPPT+EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL+ANGY Sbjct: 1 MSDRYSPRELACALGLFPPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLIANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----STYHAFA 115 A PGQVLGLTFTRKAAGQ STYHAFA Sbjct: 61 AHPGQVLGLTFTRKAAGQLLRRVRSRLARLAGVGLGAASPNHGAVDPEAAPVVSTYHAFA 120 Query: 116 GSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQL 175 GSLLRD+GLLLP+EPDTRLLSETELWQLAF+VVN YRG L T KTPAAVT+ VLRLWGQL Sbjct: 121 GSLLRDYGLLLPVEPDTRLLSETELWQLAFDVVNRYRGPLRTDKTPAAVTSMVLRLWGQL 180 Query: 176 AEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALH 235 AEHLVDT QLR+TH+ELERLVHALPAGP QRD GP+QWL R+ TQ+ERAELVPLL+AL Sbjct: 181 AEHLVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLRRLSGTQSERAELVPLLEALD 240 Query: 236 ERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFG 295 ERMRA KVMDFGMQM PQVG +LR RYRVVLLDEYQDTGH+QR+ALSALFG Sbjct: 241 ERMRAVKVMDFGMQMASAARLAAAFPQVGADLRGRYRVVLLDEYQDTGHAQRIALSALFG 300 Query: 296 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRA 355 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRF+TDF SDG PAPVLELRTSWRNPPR Sbjct: 301 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRT 360 Query: 356 LHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAA 415 L +ANAISAEARRRSVAVHAL RPDAP GTVRCALL D+ AER+WIAD + HY+RA A Sbjct: 361 LRVANAISAEARRRSVAVHALCPRPDAPPGTVRCALLPDMVAEREWIADHIDAHYRRARA 420 Query: 416 DGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPT 475 DGVSPPTAAVLVRRN RGIPVEVVGLAGLLS+PEVA+LVAMLRLV DPT Sbjct: 421 DGVSPPTAAVLVRRNADAAPIADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVADPT 480 Query: 476 AGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG-----GPQXXXXXXXXXXXXXXXXXXX 530 AGAAAMRVLTGPRWRLG D G GP Sbjct: 481 AGAAAMRVLTGPRWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRNVEADAV 540 Query: 531 XXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDV 590 CLADAI DPGPA+ YS+AGY RI ALAAEL+ALR HL H L DLVAEVRRV+ LDC+V Sbjct: 541 --CLADAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAEVRRVMDLDCEV 598 Query: 591 RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENG 650 R EHLDAFADVVA YAERA + G+ S ASV GLLA+LDVA VENG Sbjct: 599 RAAAAAGWAGT--EHLDAFADVVAGYAERAD-TGGTDASASASVAGLLAFLDVAESVENG 655 Query: 651 LPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLR 710 LP A L VARDRVQVLTVH+AKGLEWQ+VAVAHLS GVFPST ++++WLTD ELPPLLR Sbjct: 656 LPAAPLAVARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTDAAELPPLLR 715 Query: 711 GDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVL 770 GDRA GALGIPVLDTS VTNRKQLSD IS HR QL+QRRVDEERRLLYV VTRAEDT+L Sbjct: 716 GDRARPGALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVAVTRAEDTLL 775 Query: 771 VSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVV 830 VSGHHW ATG+KPRGPSDFLCE+KD+I+ SAAAGDPCGTV+QW PAP GERNPL D+ V Sbjct: 776 VSGHHWAATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGERNPLRDNAV 835 Query: 831 EAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERA 890 EAVWP DPLA+RRG+VERGA LV +A++ +EGW ADVDALL ERA Sbjct: 836 EAVWPADPLASRRGEVERGAALVRQAMA-------AEPGDPGADVEGWAADVDALLVERA 888 Query: 891 RAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYG 950 R GPP + LP QLSVS LV LARDP A QRL HRLP+RP+PHA LGNAFH WVQ+FYG Sbjct: 889 RVTGPPPQVLPGQLSVSSLVGLARDPARAAQRLRHRLPSRPEPHALLGNAFHAWVQKFYG 948 Query: 951 AELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGR 1010 AE LF+LGDLPGAADSDVG +LA LQ AF SPWAARTP+AVEVPFEMP+GDT+VRGR Sbjct: 949 AECLFELGDLPGAADSDVGDTAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGR 1008 Query: 1011 IDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHY 1070 IDAVF + DGGATVVDWKTG PP PEAMRQAAVQLAVYR+AWAAL PESSVRTAFHY Sbjct: 1009 IDAVFAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHY 1068 Query: 1071 VRTGVTVIPDELPDGMALAELLADSDP 1097 VR TV+P+ LP LA LLA + P Sbjct: 1069 VRARTTVVPEALPTSDQLAGLLAPTAP 1095 >tr|A0QTS0|A0QTS0_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent DNA helicase;[Mycobacterium smegmatis] Length = 1087 Score = 1361 bits (3523), Expect = 0.0 Identities = 711/1095 (64%), Positives = 800/1095 (73%), Gaps = 24/1095 (2%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M RYSP E+++ALG+FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANG+ Sbjct: 1 MQARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGF 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLR 120 A P QVLGLTFTRKAAGQ STYHAFAG+LLR Sbjct: 61 ATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYHAFAGTLLR 120 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 +HGLLLP+EPDTRLLSETELWQLA++VV + G L T+KTPAAVTA VLRL G LAEHLV Sbjct: 121 EHGLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLSGALAEHLV 180 Query: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 DT QLRDTH+ELERLVH LPAGP QRD GP+QWLLRMLATQTER ELVPL+DALH+RMRA Sbjct: 181 DTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLIDALHQRMRA 240 Query: 241 AKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 KVMDFGMQM PQVGE+LR R+RVVLLDEYQDTGH+QR+ALS+LFGGG DD Sbjct: 241 EKVMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSSLFGGGADD 300 Query: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 GLALTAVGDPIQSIYGWRGASATNLPRF+TDF SDG PAP LELRTSWRNPP LH+AN Sbjct: 301 GLALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNPPSTLHVAN 360 Query: 361 AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP 420 A+S EARRRSVAV ALR RPDA GT+RCALL +V AERDW+AD L Y A G + Sbjct: 361 AVSEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHGAIGRGEAA 420 Query: 421 PTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA 480 PTAAVLVRRN RG+PVEVVG+AGLL++PEVADLVAMLRL+ DPTAG+A Sbjct: 421 PTAAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIADPTAGSAV 480 Query: 481 MRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICD 540 MR+LTGPRWR G D P+ C+ADAICD Sbjct: 481 MRILTGPRWRFGARDIAALWRRAVELDDRPK--GELGTADIVAQAAPDADTACVADAICD 538 Query: 541 PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXX 600 PG A+ YS AGYERI AL EL LR HLGH LP+LVAEVRRVLGLD + R Sbjct: 539 PGDAERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAARPVAAGW 598 Query: 601 XXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR 660 E+LD F+D+V+D+A A ASV LLAYLD A EVENGL PA+LTV+ Sbjct: 599 AGTENLDRFSDLVSDFAGHAG----------ASVSALLAYLDAAVEVENGLAPAELTVSH 648 Query: 661 DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG 720 DRVQ+LTVHAAKGLEWQVVAV HLSA VFPST +WLTD +LPPLLRGDRA+ +G Sbjct: 649 DRVQILTVHAAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIG 708 Query: 721 IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG 780 +PVLDTS + +RK LSD IS H++ LDQRRVDEERRLLYV +TRAEDT+L+SGHHWGAT Sbjct: 709 VPVLDTSDIYDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATE 768 Query: 781 LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA 840 KPRGPS+FLCELK I+E + AAG PCG ++ W P P GE NPL D VVEA+WP P+A Sbjct: 769 SKPRGPSEFLCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWP--PVA 826 Query: 841 TRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPTRAL 900 + V RGA+LVA A++ EGW ADVDALLAER R L Sbjct: 827 SADDHVHRGAQLVAAAMAGEVSAEADQ--------EGWAADVDALLAERERPPQQEDTEL 878 Query: 901 PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL 960 P QLSVS LVEL+RDP A RL RLP RPDPHA LG FH WVQ+++ AE LFDL DL Sbjct: 879 PGQLSVSTLVELSRDPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDL 938 Query: 961 PGAADSDVGQV--EDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDP 1018 PGA DSD G+ E LA LQ+AF SPWAARTP+ VEVPF+M +G+TVVRGRIDAVF +P Sbjct: 939 PGAVDSDSGRAVEESLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEP 998 Query: 1019 DGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVI 1078 DG V+DWKTG+PP PEA AAVQLAVYR+AWAA+RGCP SVR AFHYVR+G TVI Sbjct: 999 DGTTMVLDWKTGDPPETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVI 1058 Query: 1079 PDELPDGMALAELLA 1093 P+ LP L +LLA Sbjct: 1059 PETLPGAEELVKLLA 1073 >tr|Q1BC68|Q1BC68_MYCSS Tax_Id=164756 SubName: Full=UvrD/REP helicase;[Mycobacterium sp.] Length = 1091 Score = 1335 bits (3454), Expect = 0.0 Identities = 710/1105 (64%), Positives = 793/1105 (71%), Gaps = 27/1105 (2%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M RYSP E+ASALG+F PTDEQAAVIAAPPGP+VVIAGAGAGKTETMAARVVWLVANGY Sbjct: 1 MTVRYSPAELASALGLFAPTDEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----STYHAFAG 116 A PGQVLGLTFTRKAAGQ STYHAFAG Sbjct: 61 ATPGQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGIGPGLGAADDPPTVSTYHAFAG 120 Query: 117 SLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLA 176 +LLRDHGLLLPIEP+TRLL ETELWQ A VV + G L KTPAAVT VLRL GQLA Sbjct: 121 TLLRDHGLLLPIEPETRLLGETELWQWAHRVVCEHPGPLEIDKTPAAVTDMVLRLAGQLA 180 Query: 177 EHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHE 236 EHLVDT +LRDTH+ELERLVH LPAGP QRD GP+QWLLRMLATQTER EL+PL+DALH Sbjct: 181 EHLVDTDELRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELIPLVDALHR 240 Query: 237 RMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGG 296 RM++ KVMDFGMQM PQVG ELR+RYRVVLLDEYQDTGH+QRVALSALFGG Sbjct: 241 RMQSEKVMDFGMQMAAAARLAAAHPQVGAELRARYRVVLLDEYQDTGHAQRVALSALFGG 300 Query: 297 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 GVDDGLALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PA VLELRTSWRNPP L Sbjct: 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGTPARVLELRTSWRNPPSTL 360 Query: 357 HLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAAD 416 HLANA+SAEAR+RSVAV +LR RP A GT+R ALL +V AERDW+AD++ Y A A+ Sbjct: 361 HLANAVSAEARQRSVAVRSLRPRPGAEPGTIRLALLDNVAAERDWVADEVASRYHAARAE 420 Query: 417 GVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTA 476 +PPTAAVL+RRN RG+PVEVVGLAGLL + EVAD+VAMLRLV DPTA Sbjct: 421 DEAPPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADPTA 480 Query: 477 GAAAMRVLTGPRWRLGGSD-XXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLA 535 GAAAMR +TGPRWRLGG D GGP CLA Sbjct: 481 GAAAMRTVTGPRWRLGGRDIAALWRRAVELDDGGP--GPEATAAEIVARAAPDADAACLA 538 Query: 536 DAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXX 595 DAICDPGPA+ YS GY RI AL EL +LRGHLG LPDLV EVRRVLG+D + R Sbjct: 539 DAICDPGPAEKYSPEGYRRIVALGRELTSLRGHLGIALPDLVTEVRRVLGVDVEARAAMP 598 Query: 596 XXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQ 655 EHLDAF DVVADYA R A+V GLLAYLD A E ENGL PA Sbjct: 599 VPAGWSGTEHLDAFVDVVADYAGRPG----------ATVGGLLAYLDAAMERENGLAPAD 648 Query: 656 LTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRAS 715 L V+ +RVQ+LTVHAAKGLEWQVVAV HLS +FPSTA +WLTDP +LPPLLRGDRA+ Sbjct: 649 LAVSTERVQILTVHAAKGLEWQVVAVPHLSGRIFPSTAQARTWLTDPADLPPLLRGDRAT 708 Query: 716 VGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHH 775 G+PVLDTS V +RK LSD I+ H+ +L+QRRVDEERRLLYV +TRAEDT+L+SGHH Sbjct: 709 TTDHGVPVLDTSDVNDRKILSDRINDHKRRLEQRRVDEERRLLYVALTRAEDTLLLSGHH 768 Query: 776 WGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWP 835 WGAT KPRGPS+FL ELKDII+R+ AG PCG VDQW PAP GE+NPL D+V E +WP Sbjct: 769 WGATEAKPRGPSEFLEELKDIIDRAEQAGQPCGVVDQWAPAPADGEKNPLRDNVKEVLWP 828 Query: 836 TDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGP 895 DP RR V+RGA+LVA A++ ++GW ADVDALLAER RA Sbjct: 829 ADPAGGRRTAVDRGAQLVARAMA--------GAVQTDQDVDGWAADVDALLAERERAAQK 880 Query: 896 PTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLF 955 P LP ++SVS LV L+ DP R+ R+PTRPDP+A LG AFH WVQ+++GAE LF Sbjct: 881 PPLTLPAEVSVSTLVNLSDDPATVLSRINRRVPTRPDPNASLGTAFHDWVQRYFGAERLF 940 Query: 956 DLGDLPGAADSDV--GQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDA 1013 DL DLPGA DSD + E L LQ AF SPWAARTPI VEVPF+M +G+T+VRGRIDA Sbjct: 941 DLDDLPGAVDSDTRRAEAEQLTELQTAFMLSPWAARTPIDVEVPFDMVIGETMVRGRIDA 1000 Query: 1014 VFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 VF D DGGAT+VDWKTG P P A AA+QLAVYR+AWA L GCP VR AFHYVR Sbjct: 1001 VFADDDGGATIVDWKTGAAPDTPAAAEHAAIQLAVYRLAWAQLSGCPVERVRAAFHYVRP 1060 Query: 1074 GVTVIPDELPDGMALAELLADSDPP 1098 T+ P LPD LA LLA + P Sbjct: 1061 NQTLRPAGLPDVEDLAALLAAAREP 1085 >tr|A1UCS6|A1UCS6_MYCSK Tax_Id=189918 SubName: Full=UvrD/REP helicase; Flags: Precursor;[Mycobacterium sp.] Length = 1091 Score = 1335 bits (3454), Expect = 0.0 Identities = 710/1105 (64%), Positives = 793/1105 (71%), Gaps = 27/1105 (2%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M RYSP E+ASALG+F PTDEQAAVIAAPPGP+VVIAGAGAGKTETMAARVVWLVANGY Sbjct: 1 MTVRYSPAELASALGLFAPTDEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----STYHAFAG 116 A PGQVLGLTFTRKAAGQ STYHAFAG Sbjct: 61 ATPGQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGIGPGLGAADDPPTVSTYHAFAG 120 Query: 117 SLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLA 176 +LLRDHGLLLPIEP+TRLL ETELWQ A VV + G L KTPAAVT VLRL GQLA Sbjct: 121 TLLRDHGLLLPIEPETRLLGETELWQWAHRVVCEHPGPLEIDKTPAAVTDMVLRLAGQLA 180 Query: 177 EHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHE 236 EHLVDT +LRDTH+ELERLVH LPAGP QRD GP+QWLLRMLATQTER EL+PL+DALH Sbjct: 181 EHLVDTDELRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELIPLVDALHR 240 Query: 237 RMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGG 296 RM++ KVMDFGMQM PQVG ELR+RYRVVLLDEYQDTGH+QRVALSALFGG Sbjct: 241 RMQSEKVMDFGMQMAAAARLAAAHPQVGAELRARYRVVLLDEYQDTGHAQRVALSALFGG 300 Query: 297 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 GVDDGLALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PA VLELRTSWRNPP L Sbjct: 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGTPARVLELRTSWRNPPSTL 360 Query: 357 HLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAAD 416 HLANA+SAEAR+RSVAV +LR RP A GT+R ALL +V AERDW+AD++ Y A A+ Sbjct: 361 HLANAVSAEARQRSVAVRSLRPRPGAEPGTIRLALLDNVAAERDWVADEVASRYHAARAE 420 Query: 417 GVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTA 476 +PPTAAVL+RRN RG+PVEVVGLAGLL + EVAD+VAMLRLV DPTA Sbjct: 421 DEAPPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADPTA 480 Query: 477 GAAAMRVLTGPRWRLGGSD-XXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLA 535 GAAAMR +TGPRWRLGG D GGP CLA Sbjct: 481 GAAAMRTVTGPRWRLGGRDIAALWRRAVELDDGGP--GPEATAAEIVARAAPDADAACLA 538 Query: 536 DAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXX 595 DAICDPGPA+ YS GY RI AL EL +LRGHLG LPDLV EVRRVLG+D + R Sbjct: 539 DAICDPGPAEKYSPEGYRRIVALGRELTSLRGHLGIALPDLVTEVRRVLGVDVEARAAMP 598 Query: 596 XXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQ 655 EHLDAF DVVADYA R A+V GLLAYLD A E ENGL PA Sbjct: 599 VPAGWSGTEHLDAFVDVVADYAGRPG----------ATVGGLLAYLDAAMERENGLAPAD 648 Query: 656 LTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRAS 715 L V+ +RVQ+LTVHAAKGLEWQVVAV HLS +FPSTA +WLTDP +LPPLLRGDRA+ Sbjct: 649 LAVSTERVQILTVHAAKGLEWQVVAVPHLSGRIFPSTAQARTWLTDPADLPPLLRGDRAT 708 Query: 716 VGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHH 775 G+PVLDTS V +RK LSD I+ H+ +L+QRRVDEERRLLYV +TRAEDT+L+SGHH Sbjct: 709 TTDHGVPVLDTSDVNDRKILSDRINDHKRRLEQRRVDEERRLLYVALTRAEDTLLLSGHH 768 Query: 776 WGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWP 835 WGAT KPRGPS+FL ELKDII+R+ AG PCG VDQW PAP GE+NPL D+V E +WP Sbjct: 769 WGATEAKPRGPSEFLEELKDIIDRAEQAGQPCGVVDQWAPAPADGEKNPLRDNVKEVLWP 828 Query: 836 TDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGP 895 DP RR V+RGA+LVA A++ ++GW ADVDALLAER RA Sbjct: 829 ADPAGGRRTAVDRGAQLVARAMA--------GAVQTDQDVDGWAADVDALLAERERAAQK 880 Query: 896 PTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLF 955 P LP ++SVS LV L+ DP R+ R+PTRPDP+A LG AFH WVQ+++GAE LF Sbjct: 881 PPLTLPAEVSVSTLVNLSDDPATVLSRINRRVPTRPDPNASLGTAFHDWVQRYFGAERLF 940 Query: 956 DLGDLPGAADSDV--GQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDA 1013 DL DLPGA DSD + E L LQ AF SPWAARTPI VEVPF+M +G+T+VRGRIDA Sbjct: 941 DLDDLPGAVDSDTRRAEAEQLTELQTAFMLSPWAARTPIDVEVPFDMVIGETMVRGRIDA 1000 Query: 1014 VFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 VF D DGGAT+VDWKTG P P A AA+QLAVYR+AWA L GCP VR AFHYVR Sbjct: 1001 VFADDDGGATIVDWKTGAAPDTPAAAEHAAIQLAVYRLAWAQLSGCPVERVRAAFHYVRP 1060 Query: 1074 GVTVIPDELPDGMALAELLADSDPP 1098 T+ P LPD LA LLA + P Sbjct: 1061 NQTLRPAGLPDVEDLAALLAAAREP 1085 >tr|A3PWI2|A3PWI2_MYCSJ Tax_Id=164757 SubName: Full=UvrD/REP helicase;[Mycobacterium sp.] Length = 1091 Score = 1332 bits (3447), Expect = 0.0 Identities = 709/1105 (64%), Positives = 791/1105 (71%), Gaps = 27/1105 (2%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M RYSP E+ASALG+F PTDEQAAVIAAPPGP+VVIAGAGAGKTETMAARVVWLVANGY Sbjct: 1 MTARYSPAELASALGLFAPTDEQAAVIAAPPGPVVVIAGAGAGKTETMAARVVWLVANGY 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----STYHAFAG 116 A PGQVLGLTFTRKAAGQ STYHAFAG Sbjct: 61 ATPGQVLGLTFTRKAAGQLLRRVRTRLARLSGAGLVPGIGPGLGATDDPPTVSTYHAFAG 120 Query: 117 SLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLA 176 LLRDHGLLLPIEP+TRLL ETELWQLA VV + G L KTPAAVT VLRL GQLA Sbjct: 121 MLLRDHGLLLPIEPETRLLGETELWQLAHRVVCEHPGPLEIDKTPAAVTDMVLRLAGQLA 180 Query: 177 EHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHE 236 EHLVDT +LRDTH+ELERLVH LPAGP QRD GP+QWLLRMLATQTER EL+PL+DALH Sbjct: 181 EHLVDTDELRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELIPLVDALHR 240 Query: 237 RMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGG 296 RM++ KVMDFGMQM PQVG ELR+RYRVVLLDEYQDTGH+QRVALSALFGG Sbjct: 241 RMQSEKVMDFGMQMAAAARLAAAHPQVGAELRARYRVVLLDEYQDTGHAQRVALSALFGG 300 Query: 297 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 GVDDGLALTAVGDPIQSIYGWRGASATNLPRF+TDF LSD PA VLELRTSWRNPP L Sbjct: 301 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDCTPARVLELRTSWRNPPSTL 360 Query: 357 HLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAAD 416 HLANA+SAEAR+RSVAV +LR RP A GT+R ALL +V AERDW+AD++ Y A A+ Sbjct: 361 HLANAVSAEARQRSVAVRSLRPRPGAEPGTIRLALLDNVAAERDWLADEVARRYDAARAE 420 Query: 417 GVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTA 476 +PPTAAVL+RRN RG+PVEVVGLAGLL + EVAD+VAMLRLV DPTA Sbjct: 421 DEAPPTAAVLLRRNADAAPMAEALTARGVPVEVVGLAGLLGVAEVADVVAMLRLVADPTA 480 Query: 477 GAAAMRVLTGPRWRLGGSD-XXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLA 535 GAAAMR +TGPRWRLGG D GGP CLA Sbjct: 481 GAAAMRTVTGPRWRLGGRDIAALWRRAVELDDGGP--GPEATAAEIVARAAPDADAACLA 538 Query: 536 DAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXX 595 DAICDPGPA+ YS GY RI AL EL +LRGHLG LPDLV EVRRVLG+D + R Sbjct: 539 DAICDPGPAERYSPEGYRRIVALGRELTSLRGHLGIALPDLVTEVRRVLGVDVEARAAMP 598 Query: 596 XXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQ 655 EHLDAF DVVADYA R A++ GLLAYLD A E ENGL PA Sbjct: 599 VPAGWSGTEHLDAFVDVVADYAGRPG----------ATISGLLAYLDAAMERENGLAPAD 648 Query: 656 LTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRAS 715 L V+ +RVQ+LTVHAAKGLEWQVVAV HLS +FPSTA +WLTDP +LPPLLRGDRA+ Sbjct: 649 LAVSTERVQILTVHAAKGLEWQVVAVPHLSGRIFPSTAQARTWLTDPADLPPLLRGDRAT 708 Query: 716 VGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHH 775 G+PVLDTS V +RK LSD I+ H+ L+QRRVDEERRLLYV +TRAEDT+L+SGHH Sbjct: 709 TTDHGVPVLDTSDVNDRKILSDRINDHKRHLEQRRVDEERRLLYVALTRAEDTLLLSGHH 768 Query: 776 WGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWP 835 WGAT KPRGPS+FL ELKDII+R+ AG PCG VDQW PAP GE+NPL D+V E +WP Sbjct: 769 WGATEAKPRGPSEFLEELKDIIDRAEQAGQPCGVVDQWAPAPAEGEKNPLRDNVKEVLWP 828 Query: 836 TDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGP 895 DP RR V+RGA+LVA A++ ++GW ADVDALLAER RA Sbjct: 829 ADPAGGRRAAVDRGAQLVARAMA--------GAVETVQDVDGWAADVDALLAERERAAQK 880 Query: 896 PTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLF 955 P LP ++SVS LV L+ DP RL R+PTRPDP+A LG AFH WVQ+++GAE LF Sbjct: 881 PPLTLPAEVSVSTLVNLSNDPDAVLSRLNRRVPTRPDPNASLGTAFHDWVQRYFGAERLF 940 Query: 956 DLGDLPGAADSDV--GQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDA 1013 DL DLPGA DSD + E L LQ +F SPWAARTPI VEVPF+M +G+T+VRGRIDA Sbjct: 941 DLDDLPGAVDSDFRRTEAEQLTELQTSFMLSPWAARTPIDVEVPFDMVIGETMVRGRIDA 1000 Query: 1014 VFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 VF D DGGAT+VDWKTG P P A AA+QLAVYR+AWA L GCP VR AFHYVR Sbjct: 1001 VFADDDGGATIVDWKTGAAPDTPSAAEHAAIQLAVYRLAWAQLSGCPVERVRAAFHYVRP 1060 Query: 1074 GVTVIPDELPDGMALAELLADSDPP 1098 T+ P LPD LA LLA + P Sbjct: 1061 NQTLRPAGLPDVEDLAALLAAAREP 1085 >tr|A4TFE0|A4TFE0_MYCGI Tax_Id=350054 SubName: Full=UvrD/REP helicase;[Mycobacterium gilvum] Length = 1091 Score = 1296 bits (3354), Expect = 0.0 Identities = 686/1099 (62%), Positives = 776/1099 (70%), Gaps = 21/1099 (1%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P YSP E++ ALG+F PT+EQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA Sbjct: 4 PLYSPAELSRALGLFEPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAT 63 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---STYHAFAGSLL 119 PG+VLGLTFTRKAAGQ TYHAFAG+LL Sbjct: 64 PGEVLGLTFTRKAAGQLLRRVRSRLARLAGAGLTIPAAGADLADDPVTIGTYHAFAGTLL 123 Query: 120 RDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHL 179 R+ GL+LP+EPDTRLL ETELWQLAF VV + L T K+PA++TA VLRL GQL+EHL Sbjct: 124 REFGLMLPVEPDTRLLGETELWQLAFRVVCEHPAALDTDKSPASITAMVLRLAGQLSEHL 183 Query: 180 VDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMR 239 VDT QLRDTH+EL+RLVH LPAG QRD GP+QWLLRMLATQTER LVPL+DALH RMR Sbjct: 184 VDTEQLRDTHVELDRLVHTLPAGRYQRDRGPSQWLLRMLATQTERTMLVPLIDALHRRMR 243 Query: 240 AAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVD 299 +VMDFGMQM T P VGE+LR RYRVVLLDEYQDTGH+QRVALS+LFGGG D Sbjct: 244 EERVMDFGMQMASAARLASTHPAVGEQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGAD 303 Query: 300 DGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLA 359 DGLALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAP LELRTSWRNPP LHLA Sbjct: 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPTLELRTSWRNPPEVLHLA 363 Query: 360 NAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVS 419 NA S +ARRRSV V +L+ RP+A G+VR ALL+DV+AERDW+ADQ+ + A + Sbjct: 364 NAASVDARRRSVEVRSLQPRPNAEPGSVRAALLSDVEAERDWVADQVAHRWHGGLAASGT 423 Query: 420 PPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAA 479 PTAAVLVRRN RG+PVEVVGLAGLL++PEVAD+VAMLR+ DPTAGAA Sbjct: 424 APTAAVLVRRNADAAPMADALSRRGVPVEVVGLAGLLAVPEVADVVAMLRVAVDPTAGAA 483 Query: 480 AMRVLTGPRWRLGGSDXXXXXXXXXXXX--GGPQXXXXXXXXXXXXXXXXXXXXXCLADA 537 A+RVLTGPRWRLG D G CLADA Sbjct: 484 AVRVLTGPRWRLGARDLTALWRRAVTLVDTGPSASDAVSATAEIVAKLEPDADDACLADA 543 Query: 538 ICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXX 597 +CDPGPA YS GY RI AL EL ALR HL LPDLVAE+RR LG+D +VR Sbjct: 544 VCDPGPAAAYSPTGYARIVALGRELTALRAHLSSPLPDLVAEIRRTLGIDAEVRAAQPIS 603 Query: 598 XXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLT 657 EHLD F DVVA++A R +A GLLAYLD A +VENGL PA++T Sbjct: 604 AGWSGTEHLDRFGDVVAEFASRGTPTAS----------GLLAYLDTAEQVENGLAPAEVT 653 Query: 658 VARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVG 717 V+ DRVQ+LTVHAAKGLEWQ+VAV HL VFPSTAS +WLTD +LPPLLRGD A+V Sbjct: 654 VSSDRVQILTVHAAKGLEWQIVAVPHLVGRVFPSTASPRTWLTDAADLPPLLRGDCATVS 713 Query: 718 ALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWG 777 A G+PVLDTS V++RK LSD I+AH+ LDQRR DEERRLLYV +TRAE T+LVSGHHWG Sbjct: 714 AHGVPVLDTSDVSDRKGLSDKIAAHKSSLDQRRTDEERRLLYVAITRAEHTLLVSGHHWG 773 Query: 778 ATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTD 837 AT KPRGPS FL E+KD+I+ S G PCG++ W AP GE NP+ D VVEAVWP D Sbjct: 774 ATESKPRGPSTFLTEIKDVIDASIEEGRPCGSIAVWADAPADGETNPIRDRVVEAVWPVD 833 Query: 838 PLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPT 897 P+A RRG V+RGA LVAEA+S GW ADVDALLAER A Sbjct: 834 PVAGRRGPVDRGAHLVAEALSGECPEVGSDDD------HGWVADVDALLAERDLAAQRAV 887 Query: 898 RALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDL 957 +LP QLSVS +VEL RDP RL RLP RPD HA LG AFH WVQ+++ AE LFDL Sbjct: 888 PSLPAQLSVSAMVELGRDPEAVAHRLQRRLPRRPDSHALLGTAFHEWVQRYFQAEKLFDL 947 Query: 958 GDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFED 1017 DLPGA D+D +L LQ AFA SPWAARTPI VEVPF+M + +VRGRIDA+F D Sbjct: 948 DDLPGAVDADRQDRGELDELQTAFAVSPWAARTPIDVEVPFDMMLAGRIVRGRIDAIFAD 1007 Query: 1018 PDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTV 1077 DG TVVDWKTGE P PE + A+QLAVYR+AWA L GCP S+VR AFHYVR+G TV Sbjct: 1008 GDGSFTVVDWKTGEMPTDPEVLAHNALQLAVYRLAWARLHGCPTSAVRAAFHYVRSGRTV 1067 Query: 1078 IPDELPDGMALAELLADSD 1096 +PD LP+ L LLAD D Sbjct: 1068 MPDALPEEDDLIALLADRD 1086 >tr|A1T624|A1T624_MYCVP Tax_Id=350058 SubName: Full=UvrD/REP helicase;[Mycobacterium vanbaalenii] Length = 1086 Score = 1295 bits (3352), Expect = 0.0 Identities = 695/1102 (63%), Positives = 774/1102 (70%), Gaps = 23/1102 (2%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 PRYSP E++ ALG+F PTDEQAAVIAA PGPLVVIAGAGAGKTETMAARVVWLVANGYA Sbjct: 4 PRYSPAELSRALGLFEPTDEQAAVIAAEPGPLVVIAGAGAGKTETMAARVVWLVANGYAR 63 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---STYHAFAGSLL 119 PG+VLGLTFTRKAAGQ STYHAFAG+LL Sbjct: 64 PGEVLGLTFTRKAAGQLLRRVRARLARLAGAGLMIPTGGADFADDPVTISTYHAFAGNLL 123 Query: 120 RDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHL 179 R+ GLLLP+EPDTRLL ETELWQLAF VV + L T+K+PA++T VLRL GQL+EHL Sbjct: 124 REFGLLLPVEPDTRLLGETELWQLAFRVVCAHPAALDTEKSPASITDMVLRLAGQLSEHL 183 Query: 180 VDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMR 239 VDT LRDTH+ELERLV LPAG QRD GP+QWLLRMLATQTER LVPL+DALH RMR Sbjct: 184 VDTAALRDTHVELERLVLNLPAGRYQRDRGPSQWLLRMLATQTERTMLVPLVDALHRRMR 243 Query: 240 AAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVD 299 +VMDFGMQM PQVG +LR RYRVVLLDEYQDTGH+QRVALS+LFGGG D Sbjct: 244 EERVMDFGMQMASAARLAAQFPQVGAQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGAD 303 Query: 300 DGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLA 359 DGLALTAVGDPIQSIYGWRGASATNLPRF+TDF LSDG PAP LELRTSWRNPP LHLA Sbjct: 304 DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPTLELRTSWRNPPEVLHLA 363 Query: 360 NAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVS 419 N +S +ARRRSVAV AL+ RP A G+VRCALL+DV+ ERDW+ADQ+ + + Sbjct: 364 NEVSVDARRRSVAVRALQPRPGAEPGSVRCALLSDVERERDWVADQIARRWHAGIEADGA 423 Query: 420 PPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAA 479 PTAAVLVRRN RG+ VEVVGLAGLL++PEVAD+VAMLRL DPTAGAA Sbjct: 424 APTAAVLVRRNADAAPMADALTRRGVAVEVVGLAGLLAVPEVADVVAMLRLAADPTAGAA 483 Query: 480 AMRVLTGPRWRLGGSDXXXXXXXXXXXXG-GPQXXXXXXXXXXXXXXXXXXXXXCLADAI 538 A+RVLTGPRWRLG D G CLADAI Sbjct: 484 AVRVLTGPRWRLGARDVAALWRRAVALVEPGASSDGESATAGIVAQLGPDADAACLADAI 543 Query: 539 CDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXX 598 CDPGPA YS AG+ RI AL EL LR HL LPDL+AEVRRVLG+D +VR Sbjct: 544 CDPGPATAYSEAGHARIVALGRELTGLRAHLQSPLPDLLAEVRRVLGIDTEVRAAQPVSA 603 Query: 599 XXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTV 658 EHLDAF DVVAD+A R A+V LL YLD+A +VENGL PA++TV Sbjct: 604 GWSGTEHLDAFGDVVADFAARGG----------ATVSALLGYLDIAEQVENGLAPAEVTV 653 Query: 659 ARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGA 718 + DRVQ+LTVHAAKGLEWQ+VAV HLS VFPSTAS +WLTD +LPPLLRGD A+V Sbjct: 654 SADRVQILTVHAAKGLEWQIVAVPHLSGRVFPSTASPRTWLTDAADLPPLLRGDCATVSE 713 Query: 719 LGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGA 778 G+PVLDTS V++RK LSD I H+ L+QRR DEERRLLYV +TRAE T+LVSGHHWGA Sbjct: 714 HGVPVLDTSDVSDRKGLSDKIYDHKRSLEQRRTDEERRLLYVAITRAEHTLLVSGHHWGA 773 Query: 779 TGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDP 838 T KPRGPS FLCELKD+I+ S +G PCG VD W AP GE NPL D VVEAVWP DP Sbjct: 774 TESKPRGPSTFLCELKDVIDASVQSGSPCGAVDVWADAPADGEPNPLRDRVVEAVWPEDP 833 Query: 839 LATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPTR 898 LA RR + GARLV A+S + GWTADVDALLAER A P Sbjct: 834 LAGRRAHTDHGARLVTTAMS------TAGGAGPQPDVHGWTADVDALLAERELAAQRPVP 887 Query: 899 ALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLG 958 LP QLSVS +VEL RDP QRL RLP RPD A LG AFH WVQ+++ AE LFDL Sbjct: 888 PLPLQLSVSAMVELGRDPEAVAQRLQRRLPRRPDAQALLGTAFHEWVQRYFQAEKLFDLD 947 Query: 959 DLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDP 1018 DLPGA D+D +L LQ AFA SPWAARTPI VEVPF+M + VVRGRIDAVF D Sbjct: 948 DLPGAVDADRQDRGELEELQAAFALSPWAARTPIDVEVPFDMMIAGRVVRGRIDAVFADG 1007 Query: 1019 DGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVI 1078 D G VVDWKTGEPP E ++ AVQLAVYR+AWA L CP SSVR AFHYVR+G TV+ Sbjct: 1008 D-GVMVVDWKTGEPPATEEELQHNAVQLAVYRLAWARLHDCPVSSVRAAFHYVRSGRTVV 1066 Query: 1079 PDELPDGMALAELLADSDPPCS 1100 PD LPD LA LLA DPP + Sbjct: 1067 PDGLPDADDLAALLA--DPPAA 1086 >tr|B1MEY5|B1MEY5_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-dependent DNA helicase;[Mycobacterium abscessus] Length = 1078 Score = 1142 bits (2953), Expect = 0.0 Identities = 619/1097 (56%), Positives = 725/1097 (66%), Gaps = 29/1097 (2%) Query: 5 YSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 64 YSP E++ LG+F PTDEQAAVI APPGP+VVIAGAGAGKTETMAARVVWLVANGYA PG Sbjct: 4 YSPAELSRVLGLFEPTDEQAAVIGAPPGPMVVIAGAGAGKTETMAARVVWLVANGYATPG 63 Query: 65 QVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRDHGL 124 QVLGLTFTRKAA Q +TYHA+AG+LLR+HGL Sbjct: 64 QVLGLTFTRKAAAQLLRRVRSRLARLAGSGILAPVAADEPDPVIATYHAYAGTLLREHGL 123 Query: 125 LLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTRQ 184 LLP+EP+ RLL+ET+LWQLAF +V + G+L T+KTP AVTA VL L GQL+EHLV+T Sbjct: 124 LLPMEPNARLLTETQLWQLAFRLVCDFDGDLDTEKTPGAVTAQVLALAGQLSEHLVNTTD 183 Query: 185 LRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKVM 244 L +H ELERL+ LP GP QR+ GP+ WLLR++ TQ ER +L+ +++ L MR V+ Sbjct: 184 LLSSHDELERLILTLPPGPRQREGGPSAWLLRLIETQRERTQLMAIVEQLIALMRTRGVL 243 Query: 245 DFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLAL 304 DFG QM P VG+ R RYRVVLLDEYQDTGH+QR+ LS+LFG GVD LAL Sbjct: 244 DFGAQMALSARLAADHPIVGQTQRERYRVVLLDEYQDTGHAQRILLSSLFGRGVDPDLAL 303 Query: 305 TAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAISA 364 TAVGDPIQSIYGWRGASATNLPRF+TDF L DG+PAP ELRTSWRNPP ALHLAN++S Sbjct: 304 TAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPTRELRTSWRNPPEALHLANSVSE 363 Query: 365 EARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTAA 424 EARRRSVAV L RPDA +G + CALL D+ AER+W+A QL Y++A +G PP++A Sbjct: 364 EARRRSVAVRPLLPRPDAASGRIACALLGDIAAEREWVATQLAAVYEQAHREGNRPPSSA 423 Query: 425 VLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRVL 484 VLVRRN +G+P EVVGL GLL +PEVAD VAMLRLV DPTAG AA+RVL Sbjct: 424 VLVRRNSDAAPMAEALAAQGVPAEVVGLTGLLGLPEVADTVAMLRLVADPTAGPAALRVL 483 Query: 485 TGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGPA 544 TGPRWRLG D G CLADAI DPG Sbjct: 484 TGPRWRLGAHDLVVLWRRATGFGRG-------GAPAVGPDVGEEADIPCLADAISDPGTP 536 Query: 545 DWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXXE 604 D YS G++R+ AL EL+ALR LG L DL+AEV+RVL LD ++ + Sbjct: 537 DEYSPEGWKRLTALRRELSALRARLGMPLTDLIAEVQRVLALDVEL----VAGRRGEGLD 592 Query: 605 HLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQ 664 L AF DV A +AE A S V L YLD A E+E GL P ++ + RVQ Sbjct: 593 QLRAFTDVAAGFAESADQS-----DPVGVVSAFLQYLDAAWEIEKGLAPVEVAASPGRVQ 647 Query: 665 VLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVG-ALGIPV 723 +LTVH+AKGLEW VVAV HLSAGVFPS + +WLT ELPPL+RGDRAS G G+P Sbjct: 648 ILTVHSAKGLEWDVVAVPHLSAGVFPSGVAAPTWLTSATELPPLVRGDRASQGDQFGVPQ 707 Query: 724 LDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKP 783 LDT +TNRKQL+D I+ H++ L RR+DEERRLLYV VTR + + VSGHHWG TGLKP Sbjct: 708 LDTEGITNRKQLADAIARHKDSLATRRIDEERRLLYVAVTRCAEQLFVSGHHWGQTGLKP 767 Query: 784 RGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRR 843 +GPSDFL EL+D+IE +AA G PCGTV++W P P AGERNP+LD VEA WP DPLA RR Sbjct: 768 KGPSDFLVELRDVIESAAAEGVPCGTVERWAPEPPAGERNPMLDQTVEAQWPADPLAGRR 827 Query: 844 GDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAVGPPTRALPNQ 903 D+E GARLV A++ +GW ADVDALL ER + P LP Sbjct: 828 DDIEAGARLVRAALA----DGAALTMEDDDDTDGWEADVDALLREREQGHRRPEMTLPQH 883 Query: 904 LSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGA 963 LSV+ LVEL +DP +RL PTRPD A+ G AFH+WVQ+ YG+ L D DLPG Sbjct: 884 LSVTSLVELRQDPQALARRLARPRPTRPDLDARRGTAFHSWVQRHYGSVRLIDFEDLPGD 943 Query: 964 ADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGA- 1022 EDLA LQ AF S WA RTP+ VEVPFE+ V VVRGRIDAVF PD Sbjct: 944 GYGSFEDAEDLAALQSAFLESEWADRTPVEVEVPFEISVAGIVVRGRIDAVF-GPDSAED 1002 Query: 1023 --TVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD 1080 TVVDWKTG P G E M+ AA+QLAVYR AWA+LR + VR FHYVR+G TV P Sbjct: 1003 TWTVVDWKTGHEPAGDE-MKAAALQLAVYRRAWASLREIDPARVRAVFHYVRSGRTVAPT 1061 Query: 1081 ELPD---GMALAELLAD 1094 ELPD LAEL D Sbjct: 1062 ELPDLPHAEELAELTRD 1078 >tr|C1B1J0|C1B1J0_RHOOB Tax_Id=632772 SubName: Full=Putative ATP-dependent DNA helicase; EC=3.6.1.-;[Rhodococcus opacus] Length = 1120 Score = 1035 bits (2676), Expect = 0.0 Identities = 587/1112 (52%), Positives = 689/1112 (61%), Gaps = 37/1112 (3%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M R P E+A LG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG Sbjct: 1 MTIRIDPVELAIGLGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGV 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYH 112 +P VLGLTFTRKAA Q STYH Sbjct: 61 VDPEAVLGLTFTRKAAQQLTTRIRKRLARLAGSELLRRVDPSGDLRSRILAGEPEVSTYH 120 Query: 113 AFAGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLW 172 ++AG LL +HGLLLPIEP LLSETELWQLA VV+ + G+L T + PA+VT VL L Sbjct: 121 SYAGRLLSEHGLLLPIEPSATLLSETELWQLAHRVVSSWDGDLDTDRNPASVTEAVLALA 180 Query: 173 GQLAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLD 232 GQLAEHLV+ LR+ H EL++LVH LPAGP QR GP + LL +L TQ R EL+PL+ Sbjct: 181 GQLAEHLVEPDDLREAHTELDKLVHTLPAGPRQR-GGPGKDLLDILDTQHRRVELLPLVQ 239 Query: 233 ALHERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSA 292 L + +R +DFG QM P+VG R+R+RVVLLDEYQDTGH+QRV LS+ Sbjct: 240 RLTDTLRREGALDFGSQMSLAARVAADHPEVGVAERTRFRVVLLDEYQDTGHAQRVLLSS 299 Query: 293 LFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNP 352 LFGGG+D LALTAVGDP+QSIYGWRGASA NLPRF+TDF +++G PAP LEL TSWRNP Sbjct: 300 LFGGGLDGELALTAVGDPMQSIYGWRGASAANLPRFATDFPMANGDPAPTLELLTSWRNP 359 Query: 353 PRALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQR 412 P AL LAN SA R R VAV LR+RP A G VR AL ADV ER+W+AD++ Y Sbjct: 360 PEALALANVASASLRERGVAVSMLRARPQAVPGDVRLALTADVVQEREWVADRIAEQYAD 419 Query: 413 AAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVG 472 AA+ G PPTAAVL+RRN RG+PVEVVGL GLL PEVAD++AMLR+V Sbjct: 420 AASRGEDPPTAAVLIRRNADAAPIAEVLRSRGLPVEVVGLGGLLHTPEVADVIAMLRVVA 479 Query: 473 DPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX--------GGPQXXXXXXXXXXXXX 524 DP AG+AA+R+LTG RW++G +D G Sbjct: 480 DPMAGSAAVRMLTGARWQIGAADLTALSRRASELAIGTGYGTTGAVTDSAALADAVGEAL 539 Query: 525 XXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVL 584 LADA+ DPGPA+ YS GY RI A+AAEL +LR +G L +LVAEV RVL Sbjct: 540 PGEHAEQAGLADALADPGPAERYSQVGYARITAVAAELASLRERIGQPLTELVAEVERVL 599 Query: 585 GLDCDVRXXXXXXXXXXXX-EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDV 643 G+ + + EHLDAFADVVA YA R T A+V GLLA+L Sbjct: 600 GIGIEAQARTRQSARGSAGREHLDAFADVVAGYANR----------TSATVTGLLAFLSA 649 Query: 644 AAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPG 703 A VE GL P ++ V RVQVLTVH+AKGLEW+VVAV+HL+AGVFPS + SWL G Sbjct: 650 AESVEKGLAPGEVEVDPHRVQVLTVHSAKGLEWEVVAVSHLTAGVFPSRTASGSWLGAVG 709 Query: 704 ELPPLLRGDRASVG--ALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVG 761 ELPP LRGDRA G A G+PVL+ + +RK L + + AH+ L RR+DE+RRL YV Sbjct: 710 ELPPSLRGDRARPGESADGVPVLELENLYDRKDLEEAVKAHKSALAARRLDEDRRLFYVA 769 Query: 762 VTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGE 821 +TR E + SGHHW +G +P+GPS+FL EL+D + G G VD W PAP E Sbjct: 770 LTRTERVLFASGHHWAESGTEPKGPSEFLTELRDTVTGEEHEG--IGVVDLWAPAPEPEE 827 Query: 822 RNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTAD 881 +NPL AVWP DPL RR VERGA LV A+ E W AD Sbjct: 828 QNPLTSTPKSAVWPRDPLGLRREAVERGAALVVAALRNAGKQSPAGEDEDP---ENWAAD 884 Query: 882 VDALLAER-ARAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNA 940 VDALLAER ARA LP QLSVS LVEL DP RL LP P+P A+ G A Sbjct: 885 VDALLAEREARANARAEVVLPGQLSVSQLVELEADPDALAARLRRPLPFPPNPLARRGTA 944 Query: 941 FHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEM 1000 FH WV++ +GA L DL +LPGAAD+ G DLA LQ+AF SPWA R P VEVPFE Sbjct: 945 FHAWVERRFGATRLLDLDELPGAADTGAGPDADLATLQDAFLRSPWADRNPTEVEVPFET 1004 Query: 1001 PVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCP 1060 V TV+RGRIDAVF DPDGG TV+DWKTG P + +QLA YR+AWA L P Sbjct: 1005 SVAGTVLRGRIDAVFTDPDGGWTVIDWKTGAEPSAANE-KAVVMQLAAYRLAWAELMDVP 1063 Query: 1061 ESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 VR AFHYVRTG T+ PD LP ALA LL Sbjct: 1064 IERVRAAFHYVRTGRTIAPDRLPGADALARLL 1095 >tr|Q0S2T3|Q0S2T3_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-dependent DNA helicase;[Rhodococcus sp.] Length = 1115 Score = 1032 bits (2669), Expect = 0.0 Identities = 585/1118 (52%), Positives = 687/1118 (61%), Gaps = 37/1118 (3%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M R P E+A LG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG Sbjct: 1 MTIRIDPVELAVGLGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGV 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYH 112 +P VLGLTFTRKAA Q STYH Sbjct: 61 VDPEAVLGLTFTRKAAQQLTARIRKRLARLAGSDLLRRVDPSGDLRSRILAGEPEVSTYH 120 Query: 113 AFAGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLW 172 ++AG LL +HGLLLPIEP LLSETELWQLA VV+ + G+L T + PA+VT VL L Sbjct: 121 SYAGRLLSEHGLLLPIEPSATLLSETELWQLAHRVVSSWDGDLDTDRNPASVTEAVLALS 180 Query: 173 GQLAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLD 232 GQLAEHLV+ LR+ H EL++LVH LPAGP QR GP + LL +L TQ R EL+PL+ Sbjct: 181 GQLAEHLVEPDDLREAHTELDKLVHTLPAGPRQR-GGPGKELLDILDTQHRRVELLPLVQ 239 Query: 233 ALHERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSA 292 L + +R +DFG QM P+VG R+R+RVVLLDEYQDTGHSQRV LS+ Sbjct: 240 RLADTLRREGALDFGSQMSLAARVAADHPEVGLAERTRFRVVLLDEYQDTGHSQRVLLSS 299 Query: 293 LFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNP 352 LFGGG+D LALTAVGDP+QSIYGWRGASA NLPRF+TDF L++G PAP LEL TSWRNP Sbjct: 300 LFGGGLDGELALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGDPAPTLELLTSWRNP 359 Query: 353 PRALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQR 412 P AL LAN SA R R V+V LR+RP A G VR AL DV ER+W+AD++ Y Sbjct: 360 PEALALANMASASLRERGVSVSTLRARPQAVPGDVRLALTGDVVQEREWVADRIAEQYAD 419 Query: 413 AAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVG 472 A + G PPTAAVL+RRN RG+PVEVVGL GLL PEVAD++AMLR+V Sbjct: 420 ATSRGEDPPTAAVLIRRNADAAPIAEVLRSRGLPVEVVGLGGLLHTPEVADVIAMLRVVA 479 Query: 473 DPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX--------GGPQXXXXXXXXXXXXX 524 DP AG+AA+R+LTG RW++G +D G Sbjct: 480 DPMAGSAAVRMLTGARWQIGAADLTALSRRASELAIGTGYGTTGAVTDSSALADAVGQAL 539 Query: 525 XXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVL 584 LADA+ DPGPA+ YS GY RI A+AAEL +LR +G L +LVAEV R L Sbjct: 540 PGEHAEQAGLADALADPGPAERYSQVGYARITAVAAELASLRERIGQPLTELVAEVERAL 599 Query: 585 GLDCDVRXXXXXXXXXXXX-EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDV 643 G+ + + EHLDAFADVVA YA R T A+V GLLA+L Sbjct: 600 GIGIEAQARTRRSARGSAGREHLDAFADVVAGYASR----------TSATVTGLLAFLSA 649 Query: 644 AAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPG 703 VE GL P ++ V RVQVLTVH+AKGLEW+VVAV HL+AGVFPS + SWL G Sbjct: 650 GESVEKGLAPGEVEVDPHRVQVLTVHSAKGLEWEVVAVPHLTAGVFPSRTASGSWLGAVG 709 Query: 704 ELPPLLRGDRASVG--ALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVG 761 ELPP LRGDRA G A G+PVL+ + +RK L + + AH+ L R++DE+RRL YV Sbjct: 710 ELPPSLRGDRARPGESADGVPVLELENLYDRKDLEEAVKAHKAALAARKLDEDRRLFYVA 769 Query: 762 VTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGE 821 +TR E + SGHHW +G +P+GPS+FL EL+D + G G VD W PAP E Sbjct: 770 LTRTERVLFASGHHWAESGTEPKGPSEFLTELRDTVTDEEHEG--IGIVDIWAPAPEPDE 827 Query: 822 RNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTAD 881 +NPL AVWP DPL RR VERGA LV A+ E W AD Sbjct: 828 QNPLTSTPKSAVWPRDPLGLRRESVERGAALVVAALKRAGAPTPAGEDDDP---ENWAAD 884 Query: 882 VDALLAER-ARAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNA 940 VDALLAER ARA LP QLSVS LVEL DP RL LP P+P A+ G A Sbjct: 885 VDALLAEREARANARTEVVLPGQLSVSQLVELEADPDALAARLRRPLPFPPNPLARRGTA 944 Query: 941 FHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEM 1000 FH WV++ +GA L DL +LPGAAD+D G DLA LQ+AF S WA R P VEVPFE Sbjct: 945 FHAWVERRFGATRLLDLDELPGAADTDAGPDTDLATLQDAFLRSSWADRNPTEVEVPFET 1004 Query: 1001 PVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCP 1060 V TV+RGRIDAVF DPDGG TV+DWKTG P + +QLA YR+AWA L P Sbjct: 1005 SVAGTVLRGRIDAVFTDPDGGWTVIDWKTGAEPSAANE-KAVVMQLAAYRLAWAELMDVP 1063 Query: 1061 ESSVRTAFHYVRTGVTVIPDELPDGMALAELLADSDPP 1098 VR AFHYVRTG T+ PD LPD ALA LL + P Sbjct: 1064 IERVRAAFHYVRTGRTIAPDHLPDADALARLLRSAGSP 1101 >tr|C0ZX42|C0ZX42_RHOE4 Tax_Id=234621 SubName: Full=Putative ATP-dependent DNA helicase; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 1130 Score = 1010 bits (2612), Expect = 0.0 Identities = 570/1127 (50%), Positives = 693/1127 (61%), Gaps = 51/1127 (4%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P+ P ++A ALG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG+ + Sbjct: 11 PKIDPVDLAVALGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGFVD 70 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P VLGLTFTRKAA Q STYHA+ Sbjct: 71 PEAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVLRALDPTGGVRSRILAGEPEVSTYHAY 130 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG LL +HGLLLPIEP LLSETELWQ+A VV+G+ +L T K P ++T TVL L GQ Sbjct: 131 AGRLLSEHGLLLPIEPSATLLSETELWQVAHRVVSGWDSDLDTDKNPGSITETVLALAGQ 190 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 LAEHLVD QL + H EL++L+H LPAGP QR GP++ LL L Q +R EL+PL+ L Sbjct: 191 LAEHLVDPEQLLEAHTELDKLIHTLPAGPKQR-GGPSKELLNYLDVQHKRIELLPLVARL 249 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 E +R +DFG QM P+VG+ R R+RVVLLDEYQDTGH+QRV LS+LF Sbjct: 250 AETLRREGALDFGSQMSLSARVASEHPEVGQTERERFRVVLLDEYQDTGHAQRVLLSSLF 309 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPR 354 GGG D LALTAVGDP+QSIYGWRGASA NLPRF+TDF L++G PAP LEL TSWRNPP Sbjct: 310 GGGTDGRLALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGKPAPTLELLTSWRNPPE 369 Query: 355 ALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAA 414 AL LAN SA RRR VAV LR+RP A AG VR ALL DV+ ER W+A+++ Y+ A Sbjct: 370 ALELANLSSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDVEQERQWVAEKIAEEYEAAR 429 Query: 415 ADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDP 474 A+ PTAAVL+RRN +G+PVEVVGL GLL PEVAD++AMLR+V DP Sbjct: 430 AEDRPTPTAAVLIRRNADAAPLAEALRSKGLPVEVVGLGGLLHTPEVADVIAMLRVVADP 489 Query: 475 TAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX--------GGPQXXXXXXXXXXXXXXX 526 AG+AA+R+LTG RW++G D G Sbjct: 490 LAGSAAVRLLTGARWQIGAKDLAALSQRSRELAISAGYGTAGAVTDAEALTSAVHDALPG 549 Query: 527 XXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGL 586 L D+I DPGPA+ YS+ GY RI A+AAEL +LR +G L +LVAEV RVLG+ Sbjct: 550 ENAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELVAEVERVLGI 609 Query: 587 DCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAA 645 + EHLDAFADVVA+YA R A++ G+LA+ A Sbjct: 610 GIEAGARTRVGVVGTAGREHLDAFADVVANYATRPT----------ANLTGMLAFFAAAE 659 Query: 646 EVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGEL 705 ++E GL P ++ VA DRVQ+LTVH+AKGLEW+VVA+ H+S GVFPS+ + SWL EL Sbjct: 660 QIEKGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAEL 719 Query: 706 PPLLRGDRA--SVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVT 763 PP LRGDRA + A G+PVLD + NRK L + I+AH++ L RR+DE+RRL YV +T Sbjct: 720 PPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVALT 779 Query: 764 RAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDP-----CGTVDQWDPAPV 818 R E + +S HHW +G +P+GPS+FL EL ++ AG+ G V++W PAP Sbjct: 780 RTERALFISAHHWAESGAEPKGPSEFLDELHQMVTADNDAGEEDSRGAIGVVEEWAPAPE 839 Query: 819 AGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGW 878 NPL A WP DPL RRG VE GA V A++ E W Sbjct: 840 PDTENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSALASLPQDSEEAEEPEDDP-ENW 898 Query: 879 TADVDALLAER-ARAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQL 937 +DVD LLAER ARA LP QLSV+ LV+L DP RL LP P+P A+ Sbjct: 899 ASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLARR 958 Query: 938 GNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVP 997 G AFH W+++ +GA L DL +LPGAAD+ G DL LQ+AF SPWA R+PI VEVP Sbjct: 959 GTAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRSPIEVEVP 1018 Query: 998 FEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAV-QLAVYRMAWAAL 1056 FE + TV+RGRIDAVF DPDGG TV+DWKTG P A A V QLA YR+AWA L Sbjct: 1019 FETSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAEP--STANEDAVVMQLAAYRVAWAEL 1076 Query: 1057 RGC-----------PESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 P VR AFHYVR+G T+ P+ LPDG ALA L+ Sbjct: 1077 MSARARSAGRNEQFPADKVRAAFHYVRSGRTIAPENLPDGEALARLI 1123 >tr|C3JKU1|C3JKU1_RHOER Tax_Id=596309 SubName: Full=UvrD/REP helicase domain protein; EC=3.6.1.-;[Rhodococcus erythropolis SK121] Length = 1130 Score = 1006 bits (2602), Expect = 0.0 Identities = 568/1128 (50%), Positives = 693/1128 (61%), Gaps = 53/1128 (4%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P+ P ++A ALG PPT EQAAVIAAP GP +V+AGAGAGKTETMAARVVWLVANG+ + Sbjct: 11 PKIDPVDLAVALGQHPPTPEQAAVIAAPLGPTLVVAGAGAGKTETMAARVVWLVANGFVD 70 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P VLGLTFTRKAA Q STYHA+ Sbjct: 71 PEAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVLRALDPTGGVRSRILAGEPEVSTYHAY 130 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG LL +HGLLLPIEP LLSETELWQ+A VV+G+ +L T K P ++T TVL L GQ Sbjct: 131 AGRLLSEHGLLLPIEPSATLLSETELWQVAHRVVSGWDSDLDTDKNPGSITETVLALAGQ 190 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 LAEHLVD QL + H EL++L+H LPAGP QR GP++ LL L Q +R EL+PL+ L Sbjct: 191 LAEHLVDPEQLLEAHTELDKLIHTLPAGPKQR-GGPSKELLNYLDVQHKRIELLPLVARL 249 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 E +R +DFG QM P+VG+ R R+RVVLLDEYQDTGH+QRV LS+LF Sbjct: 250 GETLRREGALDFGSQMSLSARVASEHPEVGQTERERFRVVLLDEYQDTGHAQRVLLSSLF 309 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPR 354 GGG D LALTAVGDP+QSIYGWRGASA NLPRF+TDF L++G PAP LEL TSWRNPP Sbjct: 310 GGGADGRLALTAVGDPMQSIYGWRGASAANLPRFATDFPLANGKPAPTLELLTSWRNPPE 369 Query: 355 ALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAA 414 AL LAN SA RRR VAV LR+RP A AG VR ALL D++ ER W+A+++ Y+ A Sbjct: 370 ALELANLSSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDLEQERQWVAEKIAEEYEAAR 429 Query: 415 ADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDP 474 A+ PTAAVL+RRN +G+PVEVVGL GLL PEVAD++AMLR+V DP Sbjct: 430 AEDRPTPTAAVLIRRNADAAPLAEALRSKGLPVEVVGLGGLLHTPEVADVIAMLRVVADP 489 Query: 475 TAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX--------GGPQXXXXXXXXXXXXXXX 526 AG+AA+R+LTG RW++G D G Sbjct: 490 LAGSAAVRLLTGARWQIGAKDLAALSQRSRELAISAGYGTAGAVTDAEALTSAVQDALPG 549 Query: 527 XXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGL 586 L D+I DPGPA+ YS+ GY RI A+AAEL +LR +G L +LVAEV RVLG+ Sbjct: 550 ENAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELVAEVERVLGI 609 Query: 587 DCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAA 645 + EHLDAFADVVA+YA R A++ G+LA+ A Sbjct: 610 GIEAGARTRVGVVGTAGREHLDAFADVVANYATRPT----------ANLPGMLAFFAAAE 659 Query: 646 EVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGEL 705 ++E GL P ++ VA DRVQ+LTVH+AKGLEW+VVA+ H+S GVFPS+ + SWL EL Sbjct: 660 QIEKGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAEL 719 Query: 706 PPLLRGDRA--SVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVT 763 PP LRGDRA + A G+PVLD + NRK L + I+AH++ L RR+DE+RRL YV +T Sbjct: 720 PPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVALT 779 Query: 764 RAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDP-----CGTVDQWDPAPV 818 R E + +S HHW +G +P+GPS+FL EL ++ A + G V++W PAP Sbjct: 780 RTERALFISAHHWAESGSEPKGPSEFLDELHQMVTAENDADEEDSRGAIGVVEEWAPAPE 839 Query: 819 AGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGW 878 NPL A WP DPL RRG VE GA V A++ E W Sbjct: 840 PDTENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSALASLPQDSQEAEEPEDDP-ENW 898 Query: 879 TADVDALLAER-ARAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQL 937 +DVD LLAER ARA LP QLSV+ LV+L DP RL LP P+P A+ Sbjct: 899 ASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLARR 958 Query: 938 GNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVP 997 G AFH W+++ +GA L DL +LPGAAD+ G DL LQ+AF SPWA R+PI VEVP Sbjct: 959 GTAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRSPIEVEVP 1018 Query: 998 FEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAV--QLAVYRMAWAA 1055 FE + TV+RGRIDAVF DPDGG TV+DWKTG P A + AV QLA YR+AWA Sbjct: 1019 FETSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAE---PSAANEDAVVMQLAAYRVAWAE 1075 Query: 1056 LRGC-----------PESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 L P VR AFHYVR+G T+ P+ LPDG ALA L+ Sbjct: 1076 LMSARARSAGRNEQFPADKVRAAFHYVRSGRTIAPENLPDGEALARLI 1123 >tr|C2ARP9|C2ARP9_TSUPA Tax_Id=521096 SubName: Full=DNA/RNA helicase, superfamily I;[Tsukamurella paurometabola DSM 20162] Length = 1107 Score = 915 bits (2365), Expect = 0.0 Identities = 539/1114 (48%), Positives = 646/1114 (57%), Gaps = 44/1114 (3%) Query: 3 PRYSPDEIASALG-IFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA 61 P S +++A LG F PT EQ AVI AP GP +V+AGAGAGKTETMA RVVWL+AN Y Sbjct: 9 PLISAEDLAYELGQAFAPTQEQRAVIEAPLGPCLVVAGAGAGKTETMAGRVVWLIANRYV 68 Query: 62 EPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHA 113 P QVLGLTFTRKAA Q STYHA Sbjct: 69 TPDQVLGLTFTRKAAQQLMIRVRKRLSRLGAAPALERIDPSGELRVLLRTVEPEISTYHA 128 Query: 114 FAGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWG 173 +AG L D+G+LLP+EP RL+SETE WQ+AF+VV G+ L T K PA +T VL L G Sbjct: 129 YAGRLHGDYGMLLPVEPTVRLVSETERWQIAFDVVTGWDEALETDKNPATLTEQVLGLSG 188 Query: 174 QLAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDA 233 LA+HLV QL + ELERL+ LP GP QR + PN LL+ Q +R L+PL+ A Sbjct: 189 ALADHLVTPDQLEASDDELERLIGLLPPGPRQR-AAPNAALLKAADVQEQRRALIPLVRA 247 Query: 234 LHERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSAL 293 + MR +V+DFG QM P V RSR+ VLLDEYQDTGH+QR+ L++L Sbjct: 248 VAAEMRVREVLDFGSQMGLAAQLALANPDVAALERSRFGAVLLDEYQDTGHAQRMLLASL 307 Query: 294 FGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPP 353 FGG A+TAVGDPIQSIYGWRGASA NLPRF+TDF +DG PAP EL TSWRNP Sbjct: 308 FGGP-GGAAAVTAVGDPIQSIYGWRGASAANLPRFATDFPQADGMPAPRRELLTSWRNPT 366 Query: 354 RALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRA 413 AL LANA+S + RRR V V LR+RPDAP+G +R AL + V ER W+AD + ++ Sbjct: 367 GALSLANAVSEDLRRRGVPVSELRARPDAPSGDLRIALHSTVIDERTWVADAITALWRGR 426 Query: 414 AADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGD 473 G PPT AVLVRRN RG+PVEVVGL GLL PEV DLVA+LRL + Sbjct: 427 LDAGDPPPTVAVLVRRNADSAGLAAALGERGVPVEVVGLGGLLHTPEVQDLVALLRLAVE 486 Query: 474 PTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGP--------QXXXXXXXXXXXXXX 525 P AG AAMR+LTGPRW+LG +D G Sbjct: 487 PLAGTAAMRLLTGPRWQLGAADLRALWNRARRIAHGTGRAATGLVTTADELDQALDATLP 546 Query: 526 XXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLG 585 L DAI DPGP YS+AG +I +L E+ +R LGH LP++VAE RVLG Sbjct: 547 AELLDAAGLGDAIADPGPDSDYSAAGLAKIRSLDREIRNVRERLGHPLPEVVAEAERVLG 606 Query: 586 LDCD--VRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDV 643 + + +R EHLDAFADVV YAER A++ GLL++L Sbjct: 607 VSIETRIRAARQLGGRATGREHLDAFADVVVSYAERPT----------ATLPGLLSFLAA 656 Query: 644 AAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPG 703 A VE GL P + VA DRVQVLTVH+AKGLEW VVAV HLS G+FPS + +WL+ P Sbjct: 657 AEAVEGGLTPGDVEVATDRVQVLTVHSAKGLEWDVVAVPHLSEGIFPSNRAMPTWLSTPA 716 Query: 704 ELPPLLRGDRASVGAL-GIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGV 762 ELPP LRGD A G G+P LD S NRK L D + HR L + E+ RL YV V Sbjct: 717 ELPPELRGDVAEPGESDGVPRLDLSECNNRKDLEDALDTHRAALKAMNMHEDERLFYVAV 776 Query: 763 TRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGER 822 TR + T+L+SGH+W + PS FL ++ + V W PV Sbjct: 777 TRTQGTLLLSGHYWSEDVKTAKAPSRFLDRAREHAPEA---------VGHWAATPVDDAE 827 Query: 823 NPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADV 882 NPL + V+A WP D LA R D + GA LV A++ GW ADV Sbjct: 828 NPLEAEPVQAPWPRDFLAAHRADADAGAALVLAALADPDGTEADARAPGEDP-HGWAADV 886 Query: 883 DALLAERARAVGPPTR-ALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAF 941 ALLAERAR A+P ++SVS LVEL R P +RL +P RP+P+A+ G AF Sbjct: 887 TALLAERARQAAMDLEVAVPREVSVSQLVELRRSPETFARRLRRPVPYRPNPYARRGTAF 946 Query: 942 HTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMP 1001 H W+++ YGA L D +LPGAAD D G E+LA LQ F S WAARTP+ +EVPFE+ Sbjct: 947 HAWLERRYGASRLLDFDELPGAADGDAGADENLALLQRRFEESEWAARTPVDIEVPFEIA 1006 Query: 1002 VGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPE 1061 TVVRGR+DAVF DP GG TVVDWKTG P P R AAVQLA YR+AWA LR P Sbjct: 1007 AAGTVVRGRMDAVFRDPGGGFTVVDWKTGVRPSEPADERAAAVQLAAYRLAWARLRDVPV 1066 Query: 1062 SSVRTAFHYVRTGVTVIPDELPDGMALAELLADS 1095 VR AF YVR+G TV P +L D L ELL S Sbjct: 1067 DEVRAAFFYVRSGETVSPSDLLDHAGL-ELLITS 1099 >tr|D0LEA1|D0LEA1_GORB4 Tax_Id=526226 SubName: Full=UvrD/REP helicase; Flags: Precursor;[Gordonia bronchialis] Length = 1119 Score = 899 bits (2322), Expect = 0.0 Identities = 528/1127 (46%), Positives = 648/1127 (57%), Gaps = 53/1127 (4%) Query: 6 SPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 S +A+ALG+ PT EQAAVI P P++V+AGAGAGKTETMAARVVWLVAN P + Sbjct: 3 SATSLAAALGLPTPTAEQAAVIEGPIEPMLVVAGAGAGKTETMAARVVWLVANQLIGPDE 62 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGS 117 +LGLTFTRKAA + STYHA+AG Sbjct: 63 ILGLTFTRKAASELGARIRRRLSMLSGSPALRSWDPEGTLAARLRGADPEVSTYHAYAGR 122 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 L+ D+GLLLP+EP++ LLSETELWQLAF +V + EL T K PA+VT VL+L+G++AE Sbjct: 123 LISDYGLLLPVEPNSTLLSETELWQLAFSLVANWPDELHTTKVPASVTEAVLKLYGEMAE 182 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLVD L +L ++ LP GP QR GPNQ LL++ ER EL+P++ AL E Sbjct: 183 HLVDIDDLARAGSDLYEMIPTLPKGPKQR-GGPNQALLKIRDVIDERRELIPMVTALAEA 241 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 MR +DFG QM P+V R +R VLLDEYQDTGHSQRV LS LFGG Sbjct: 242 MREQSALDFGSQMSLAARLVVGNPEVVAAERKAFRAVLLDEYQDTGHSQRVLLSTLFGGT 301 Query: 298 VDDG-LALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 D +A+TAVGDPIQSIYGWRGASA NLPRF+ DF +DG+PA EL TSWRN L Sbjct: 302 SRDAPVAVTAVGDPIQSIYGWRGASAANLPRFAGDFPAADGSPADRRELLTSWRNAEVVL 361 Query: 357 HLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAAD 416 LAN +SAE RRR + V LR+RPDAP+G+ AL V ER+WIAD ++ ++ A D Sbjct: 362 RLANHVSAELRRRGIPVSVLRARPDAPSGSAHIALTETVVDEREWIADAIETRWRAAEND 421 Query: 417 GVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTA 476 G +PPT A+LVRRN RGIP EVVG+ GLL +PEV D+V+ LRL+ DP A Sbjct: 422 GQAPPTTAILVRRNEDSAPLAAELERRGIPAEVVGIGGLLHVPEVTDVVSTLRLMADPMA 481 Query: 477 GAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX--------GGPQXXXXXXXXXXXXXXXXX 528 G AAMR+LTG RWRLG +D G Sbjct: 482 GTAAMRLLTGARWRLGAADLAALWRRAAELAAEEIAAAGGAVTSREQLDAALDAVLPTEV 541 Query: 529 XXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDC 588 +ADA+ DPG YS GY RI A A+L +LR +G LP+LVA+V +G+ Sbjct: 542 VDRAGIADAVVDPGDPSRYSPDGYARIRAFGAQLESLRRRIGQPLPELVADVENTIGVGV 601 Query: 589 DVRXXXXXXXXXXXX-EHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEV 647 + + EHLDAFA+ V YA+R A + GLLA+L+ A + Sbjct: 602 EAQIRARRMRGAITGREHLDAFAEYVTRYADRRG----------ADLPGLLAFLETAETI 651 Query: 648 ENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPP 707 E GL P ++ VA RVQ+LTVHAAKGLEW VVA+ HL +FP + ++WL ELP Sbjct: 652 EKGLEPGRIEVAEQRVQILTVHAAKGLEWDVVAIPHLCHNIFPGGKAETTWLGSARELPG 711 Query: 708 LLRGDRA------SVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVG 761 LRGD A S G PVLD AVT+RK+L DTI+ ++E + RR++E+RRLLYV Sbjct: 712 ELRGDLAIAAEQGSAHPEGYPVLDLHAVTDRKELEDTIATYKEAIADRRLEEDRRLLYVA 771 Query: 762 VTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCG-----TVDQWDPA 816 +TRA +L+S HHW +G KPRG S+F EL I S A DP VD P Sbjct: 772 LTRARHDLLISAHHWSESGDKPRGGSEFFTELLTAI--SDAVDDPTVESGGLVVDVLAPE 829 Query: 817 PVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXX-- 874 P G NPL + V+ A WP DPLA RR V A LV I+ Sbjct: 830 PDDGAPNPLAERVLAAPWPADPLAGRRDGVRAAADLVLAEIAARDAPALFDTDGAPESDG 889 Query: 875 -------IEGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHR 926 I W A+V ALL ER + LP LSVS LVEL D +RL Sbjct: 890 DPDLSDEIAAWEAEVSALLVEREASNQALVEVELPTHLSVSQLVELDADEAEFARRLRRP 949 Query: 927 LPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPW 986 P RP+P A+ G AFH WV++++GA L D+ +LPGAAD+ DL L++AF SPW Sbjct: 950 TPFRPNPTARRGTAFHAWVERWFGATRLLDIDELPGAADATATPDADLDALRDAFLASPW 1009 Query: 987 AARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQL 1046 A R+P VEVPFE + VVRGRIDAVF DPDGG TV+DWKTG P P +QL Sbjct: 1010 ANRSPSEVEVPFETVIAGIVVRGRIDAVFADPDGGWTVIDWKTGVVPE-PARRESLFIQL 1068 Query: 1047 AVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA 1093 A YR+AWA L G P VR AFHYVR+G T+ DELPD LA LA Sbjct: 1069 AAYRIAWAQLAGVPVDRVRAAFHYVRSGHTLAADELPDESVLAAKLA 1115 >tr|A4F8N5|A4F8N5_SACEN Tax_Id=405948 SubName: Full=Probable ATP-dependent DNA helicase; EC=3.6.1.-;[Saccharopolyspora erythraea] Length = 1078 Score = 837 bits (2161), Expect = 0.0 Identities = 507/1100 (46%), Positives = 618/1100 (56%), Gaps = 44/1100 (4%) Query: 6 SPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 +P IA ALG+ PPT EQA VIAAPP P +V+AGAGAGKTETMAARVVWLVAN P + Sbjct: 3 APQRIAHALGLHPPTPEQAEVIAAPPEPALVVAGAGAGKTETMAARVVWLVANRLVTPER 62 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------TYHAFAGS 117 VLGLTFTRKAA Q TYHA+AG Sbjct: 63 VLGLTFTRKAARQLADRVRARLRRLAGSGLLDEVDPSGELRSTVLAGEPTVLTYHAYAGR 122 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 L+ +HGL +P+EP RLL+ET WQLA VV+ + +L T K P+ VT +L L G+LAE Sbjct: 123 LVGEHGLRVPVEPGARLLTETAAWQLAHRVVSTWTEDLDTDKVPSTVTGYLLSLAGELAE 182 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLV LR L R + P Q+ P L +++ATQ R L+PLL +R Sbjct: 183 HLVRPDDLRAHAEALCRTIENAPRAKRQKAELPKD-LQKVVATQRLRVALLPLLAEYAQR 241 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 R MDF QM P+V R R+ VLLDEYQDTGH+QRV L +LFG G Sbjct: 242 KRREAAMDFADQMSLAAGLAAEHPEVVAGERERFGAVLLDEYQDTGHAQRVLLRSLFGQG 301 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 + +T+VGDP Q+IYGWRGASA NLPRF+TDF APA L TS+RNPP L Sbjct: 302 RT--MPVTSVGDPAQAIYGWRGASAANLPRFTTDFPKDSMAPARRYGLLTSFRNPPEVLR 359 Query: 358 LANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADG 417 +ANA+SA R + V LR++ A AG +R AL DV+ ERDW+AD++ + A + Sbjct: 360 VANAVSAPLREAGLEVEELRAKDGAEAGDIRVALADDVRQERDWVADRIAAQWHAALDEN 419 Query: 418 VSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAG 477 PPTAAVLVRR RG+PVEVVGL GLL EV DLV+ LR++ DP AG Sbjct: 420 GRPPTAAVLVRRRADMADLAAALRDRGLPVEVVGLGGLLDEAEVRDLVSALRMLVDPLAG 479 Query: 478 AAAMRVLTGPRWRLGGSDXXXXXXXXXXXX----GGPQXXXXXXXXXXXXXXXXXXXXXC 533 AAMR+LTG RWRLG +D G P+ Sbjct: 480 TAAMRLLTGSRWRLGAADIAALWDRARELGERAFGAPESEDPTAAVAAALPGEHAEQAG- 538 Query: 534 LADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXX 593 L DA+ DPG A+ YS GY+RI L EL LR L LP+LVA+V R L LD + Sbjct: 539 LVDALDDPGNAERYSEPGYQRIRRLGRELANLRRRLEQPLPELVADVERTLLLDIESLSR 598 Query: 594 XXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPP 653 HLDAFADVV D+A S A++ LL YL A E+GL P Sbjct: 599 PGGAGRI----HLDAFADVVTDFA---------TASPSATLPALLDYLAAAERAEDGLEP 645 Query: 654 AQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDR 713 ++ VA DRVQVLTVHAAKGLEW+VVA+ HL VFP SSWL ELP LRGD Sbjct: 646 GEVEVADDRVQVLTVHAAKGLEWEVVALPHLVRDVFPGKRKASSWLRAVTELPARLRGDA 705 Query: 714 ASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSG 773 + L LD +RK++ + + AH ++ + RR+ EERRLLYV VTR+E ++L+SG Sbjct: 706 QDLPRLD---LDRLQGMDRKEIVEALEAHDDEFEDRRLTEERRLLYVAVTRSERSLLLSG 762 Query: 774 HHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAV 833 H W G KP+GPSDFL +L ++++ G V+QW P P NPL + V A Sbjct: 763 HWWAEGGDKPKGPSDFLLQLAEVVK-----SPDVGVVEQWSPQPPEDAPNPLAEAVRSAE 817 Query: 834 WPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARAV 893 WP DPL TRR V GA LV A+ +GW DVD LLAERA A Sbjct: 818 WPVDPLGTRRDAVAEGANLVLAALDAVDSAAPDEEDE-----DGWARDVDVLLAERAAAA 872 Query: 894 GPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAE 952 + LP LSVS LVELA D +RL LP P+P + G AFH+W++ + + Sbjct: 873 RRRDQVRLPEHLSVSQLVELADDADALARRLRRPLPYPPNPMTRRGTAFHSWLEHRFTST 932 Query: 953 LLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRID 1012 L D +LPGAAD +DL LQ+AF WA RTP VEVPFE V VVRGR+D Sbjct: 933 ALLDFDELPGAADESATPHDDLEMLQQAFLAGSWAERTPHRVEVPFETQVEGVVVRGRMD 992 Query: 1013 AVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVR 1072 AVF D DGG TVVDWKTG P G + +R +VQLA YR+AW+AL G P VR AFHYVR Sbjct: 993 AVFADSDGGWTVVDWKTGAVPAG-DQVRALSVQLAAYRLAWSALSGAPLEKVRAAFHYVR 1051 Query: 1073 TGVTVIPDELPDGMALAELL 1092 T+ P +L D L ELL Sbjct: 1052 HDRTLRPADLLDAEGLRELL 1071 >tr|C7MVN3|C7MVN3_SACVD Tax_Id=471857 SubName: Full=DNA/RNA helicase, superfamily I;[Saccharomonospora viridis] Length = 1090 Score = 816 bits (2108), Expect = 0.0 Identities = 504/1108 (45%), Positives = 620/1108 (55%), Gaps = 62/1108 (5%) Query: 6 SPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 SP +IA ALG+ PT EQAAV+AAPP P +V+AGAGAGKTETMAARVVWLVANG P + Sbjct: 13 SPADIAEALGLPVPTPEQAAVVAAPPEPALVVAGAGAGKTETMAARVVWLVANGLVTPDR 72 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--------TYHAFAGS 117 VLGLTFTRKAA Q TYHA+AG Sbjct: 73 VLGLTFTRKAARQLADRVRARLRRLAGSGLLDDVDPSGRRRLAVASGEPTVLTYHAYAGR 132 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 LL ++GL LP++P R+LSET WQLA+ VV+ + +L T K P VT +L L G+L E Sbjct: 133 LLAEYGLRLPVQPGARILSETASWQLAYRVVSSWDADLDTDKAPMTVTEHLLALAGELGE 192 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLV +LR+ LV P QR + P + LL ++A Q R +L+PL++A R Sbjct: 193 HLVSPERLREYTTWFCDLVENAPRAKGQR-AKPKKELLDIVAAQRLRLQLLPLVEAYEHR 251 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 RA +DF QM T P V R RY VLLDEYQDTGH+QRV L +LFGG Sbjct: 252 KRAEGALDFADQMSLAARLAETQPDVVASERERYGAVLLDEYQDTGHAQRVLLRSLFGGP 311 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSD---GAPAPVLE--LRTSWRNP 352 + +TAVGDP Q+IYGWRGASA NLPRF+TDF D G P P E + TS+RNP Sbjct: 312 AP--MPVTAVGDPAQAIYGWRGASAANLPRFTTDFPRLDERTGQPVPAREYGMLTSFRNP 369 Query: 353 PRALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQR 412 P L LAN+I+ R + + V LR+R DA +R ALL DV +ER+W+ADQ+ + Sbjct: 370 PEVLTLANSIAEPLRAKGLGVQELRARADAGPADIRVALLPDVVSEREWVADQIATRWFA 429 Query: 413 AAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVG 472 + PTAAVLVRR RG+PVEVVGL GLL PEVADLVA LR++ Sbjct: 430 ERDATGTAPTAAVLVRRRVDMAPMAAALRARGLPVEVVGLGGLLDEPEVADLVATLRVLA 489 Query: 473 DPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXX 532 +P +G AA+R+LTG RWRLG +D Sbjct: 490 EPLSGTAAVRLLTGARWRLGAADLGALWRRAGELSAADDTVVAERAEQAG---------- 539 Query: 533 CLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRX 592 L DAI DPG YS GY RI L+ EL ALR + LP+LVA+V R + LD + Sbjct: 540 -LVDAIDDPGEPSRYSEEGYARIRRLSRELEALRRRMDQPLPELVADVERTMLLDVEA-- 596 Query: 593 XXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLP 652 HLDAFADVV DYAE S A++ + YL A E+GL Sbjct: 597 --LARPGAVGRAHLDAFADVVNDYAEN---------SPTATLLSFVDYLAAATRAEDGLE 645 Query: 653 PAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGD 712 P ++ V DRVQVLT H+AKGLEW++VAV HL FP+ SSWL ELP LRGD Sbjct: 646 PGEVEVVPDRVQVLTAHSAKGLEWRIVAVPHLVDRTFPNERKTSSWLKTVTELPAALRGD 705 Query: 713 RASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVS 772 A +P L +RKQ+ + ++ H E +R +EERRL YV +TR+E ++VS Sbjct: 706 -----AQDLPQLALRGGEDRKQVEEALAEHEEGFRRRHAEEERRLCYVALTRSEHCLVVS 760 Query: 773 GHHWG-ATGLKPRGPSDFLCELKDIIERSAAAGDP-CGTVDQWDPAPVAGERNPLLDDVV 830 G+ WG A +P+ PS FL E+ + + DP G V+ W P GE NPL Sbjct: 761 GYRWGDANATEPKAPSPFLTEVAERVRE-----DPTVGVVEHWCSEP--GE-NPLAGVSR 812 Query: 831 EAVWPTDPLATRRGDVERGARLVAEA---ISXXXXXXXXXXXXXXXXIEGWTADVDALLA 887 E WP DPL RR V+ GARLV EA + + W +D D LLA Sbjct: 813 ETEWPVDPLGARRPAVDEGARLVLEALEELESGADAETDEEITEEDDPDNWVSDTDVLLA 872 Query: 888 ERARAVGPPTR-ALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQ 946 ERARA P LP +LSVS LV+LA +P +RL LP P+ +A+ G FH W++ Sbjct: 873 ERARAREPQVEIELPGKLSVSQLVDLAGEPEDLARRLRRPLPFPPNAYARRGTEFHGWLE 932 Query: 947 QFYGAELLFDLGDLPGAADSDVGQVE--DLAPLQEAFAGSPWAARTPIAVEVPFEMPVGD 1004 + + ++ LFDL +LPGAAD+DVG + DL L+EAF SPWA R P VEVPF + Sbjct: 933 RRFASDKLFDLDELPGAADADVGDADPADLEALKEAFERSPWAQRVPHDVEVPFSTAIDG 992 Query: 1005 TVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSV 1064 VRGRIDAVF DPDGG TVVDWKTG P E M AVQLA YR+AWA L G P V Sbjct: 993 ITVRGRIDAVFADPDGGWTVVDWKTGALP-DAERMPALAVQLAAYRLAWANLSGAPLEKV 1051 Query: 1065 RTAFHYVRTGVTVIPDELPDGMALAELL 1092 R AFHYVR TV P +L D L LL Sbjct: 1052 RAAFHYVRANRTVRPVDLADADGLRALL 1079 >tr|C8XJ57|C8XJ57_NAKMY Tax_Id=479431 SubName: Full=UvrD/REP helicase;[Nakamurella multipartita] Length = 1106 Score = 759 bits (1961), Expect = 0.0 Identities = 490/1136 (43%), Positives = 603/1136 (53%), Gaps = 82/1136 (7%) Query: 9 EIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLG 68 ++A LG+ PT EQAAVI AP P +V+AGAG+GKTETMAARVV+L+A G P QVLG Sbjct: 6 DLARELGLPAPTAEQAAVIEAPLEPGLVVAGAGSGKTETMAARVVYLIATGQVRPEQVLG 65 Query: 69 LTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----STYHAFAGSLLRDHG 123 LTFTRKAA STYHAF G L+ D G Sbjct: 66 LTFTRKAAAALAQRIRQRLALLTTLRPRTGSGRSPADLPAGDPDVSTYHAFGGRLIADFG 125 Query: 124 LLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTR 183 L IEP R+L+ T WQLA VV + G+L T P VT +L + LA+HL D Sbjct: 126 PLAGIEPAARVLTPTGAWQLARRVVGRWDGDLLTDLGPDQVTERLLAISSALADHLTDVD 185 Query: 184 QLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKV 243 L D + + + P GP QR + + L + +R ++PL+ A R V Sbjct: 186 LLSDELATVLDRLRSAPPGPRQR-AALHSGLAGPVKRLQDRQWILPLVAAYVRAKRDRGV 244 Query: 244 MDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFG-------- 295 +DF QM P++GE +R RYRVVLLDEYQDTGH+QRV L +LFG Sbjct: 245 VDFADQMQIAATLVREHPRIGEAMRERYRVVLLDEYQDTGHAQRVILRSLFGDRDGAGRA 304 Query: 296 ---GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNP 352 G G +TAVGDP+QSIY WRGASA+NLPRF TDF L+ G P+ + L TS+RNP Sbjct: 305 GGHGQARWGHPVTAVGDPVQSIYSWRGASASNLPRFVTDFPLASGRPSSIRSLLTSFRNP 364 Query: 353 PRALHLANAISAEARR--RSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHY 410 L LAN +S R+ R+V V LR P A G +R L + E W+A+ + G++ Sbjct: 365 GAVLALANEVSRPVRQGGRAVEVGELRPTPAADPGRLRYGLFGTAEQENAWLAEAIAGYW 424 Query: 411 QRAAADG---VSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 + A +G +PPT AVLVRR G+PVEVVGL GLL PEVADLVA Sbjct: 425 RDALDEGGAGATPPTTAVLVRRRSDMADTADALRAAGLPVEVVGLGGLLDEPEVADLVAT 484 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG-----------GP-QXXXX 515 LR++ DPTAG AAMR+LTG RW+LG +D G GP Sbjct: 485 LRVLVDPTAGPAAMRLLTGARWQLGAADLEALAARARELAGPARPADGHGAGGPADPTAV 544 Query: 516 XXXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPD 575 + DA D GPA YS+AG+ R+ AA L LR L LPD Sbjct: 545 VRSAVAAALPVEDIDTWSMVDAAGDLGPAQAYSAAGHRRLVRFAAHLARLRARLNQPLPD 604 Query: 576 LVAEVRRVLGLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVD 635 L+A++ R LD + HLDAFA VVA E AA AG A Sbjct: 605 LIADLERACHLDVE------SLVAGTGRAHLDAFAAVVA---EVAATGAGPA-------- 647 Query: 636 GLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASR 695 LL YLD AAE E+GL P ++ RVQVLTVHAAKGLEW++VAV HL+ GVFP T Sbjct: 648 ELLEYLDAAAEREDGLTPGEVPQPSGRVQVLTVHAAKGLEWEIVAVPHLTEGVFPITRG- 706 Query: 696 SSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEER 755 S+WL DP +LPP LRGDR + L P T +K L+D ++AH + + R+ EER Sbjct: 707 STWLGDPAQLPPQLRGDRDDLPQLAWPAGGT-----QKDLADALAAHAAEFGELRLTEER 761 Query: 756 RLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDP 815 RLLYV +TRAE T+L SGHHWG KP GPS FL E AA P D+W P Sbjct: 762 RLLYVALTRAERTLLFSGHHWGTGLAKPAGPSPFL-------EECAALARPFAEPDEWAP 814 Query: 816 APVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXI 875 P E LL AVWP DPL RR V+ GA V +A++ Sbjct: 815 PPATDEGQQLLPRT--AVWPIDPLGPRRPHVQVGADRVLQALADLAAAEPEPVEDRPGTA 872 Query: 876 E--------GWTADVDALLAERA-RAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHR 926 + GW ADV LLAER+ R LP ++V+ LVELA DP +RL Sbjct: 873 DEVDTGDPFGWAADVTTLLAERSDRGREVHEVELPGTITVTSLVELADDPAELARRLTRP 932 Query: 927 LPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPW 986 +PT G FH W++ + E L +L DLPGA D+ VG ++ L+ F SPW Sbjct: 933 VPTESSGRLSRGTDFHAWLEHRFRGEALLELSDLPGAGDAWVGADPEIEDLKRRFLASPW 992 Query: 987 AARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQL 1046 A R PI VEVPF + VRGR+DA+F D DGG TVVDWKTG P +A AAVQL Sbjct: 993 ADRVPIDVEVPFASRIAGLGVRGRVDAIFADADGGITVVDWKTGHSPLREDA---AAVQL 1049 Query: 1047 AVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA----DSDPP 1098 A YR+A A L G P + VR AFHYVR+GVT P L D + L+A D PP Sbjct: 1050 ACYRLAIAQLHGLPLARVRAAFHYVRSGVTQSPANLLDADGIEALIARNTLDPVPP 1105 >tr|Q5YR02|Q5YR02_NOCFA Tax_Id=37329 SubName: Full=Putative DNA helicase;[Nocardia farcinica] Length = 1184 Score = 754 bits (1947), Expect = 0.0 Identities = 429/885 (48%), Positives = 532/885 (60%), Gaps = 44/885 (4%) Query: 6 SPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 SP IA ALG+ PPTDEQAAVIAAPPGP +V+AGAGAGKTETMAARVVW+VAN P Q Sbjct: 4 SPHRIADALGLPPPTDEQAAVIAAPPGPTLVVAGAGAGKTETMAARVVWMVANRLVLPEQ 63 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGS 117 VLGLTFTRKAA Q STYH++AG Sbjct: 64 VLGLTFTRKAAQQLTARIRTRLARLAGSALLRELDSGGELRAQLAGAEPEISTYHSYAGR 123 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 LL +HGLLLP+EP LL+ET+LWQLA +VV + G+L T++TP +VT VL L GQLAE Sbjct: 124 LLSEHGLLLPVEPSATLLTETQLWQLAHQVVRNWDGDLDTERTPVSVTEAVLALSGQLAE 183 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLV+ +L + H ELE+L++ LPAGP QR GP++ L ++ Q ER L+PL+ AL++ Sbjct: 184 HLVEPEELAEAHAELEKLINTLPAGPRQR-GGPSKALRDIVRVQHERVALLPLVRALNDA 242 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 +R +DFG QM P+V E R R+R+VLLDEYQDTGH+QRV LSALFGG Sbjct: 243 LRRRGALDFGAQMSLAARLAAEHPEVAEAERGRFRLVLLDEYQDTGHAQRVLLSALFGGA 302 Query: 298 VDD----------GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRT 347 D A+TAVGDP+QSIYGWRGASA NLPRF+TDF + GAPAP+L L T Sbjct: 303 AGDPEGTAGGRAPRPAVTAVGDPMQSIYGWRGASAANLPRFATDFPCAPGAPAPILPLLT 362 Query: 348 SWRNPPRALHLANAISAEARRRS-----VAVHALRSRPDAPAGTVRCALLADVQAERDWI 402 SWRNPP AL LAN ++ R+ + V ALR++P A G V AL V ER W+ Sbjct: 363 SWRNPPEALALANLVAEPLRQAAREAGGATVDALRAKPGAEPGVVALALTETVVDERGWV 422 Query: 403 ADQLQGHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVA 462 A+++ + A G PPT+AVLVRRN +G+PVE+VGL GLL+ PEVA Sbjct: 423 AERIAAEWAARRAAGEPPPTSAVLVRRNADAAPLAEALREQGLPVEIVGLGGLLATPEVA 482 Query: 463 DLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSD--------XXXXXXXXXXXXGGPQXXX 514 D+VA LRL+ +P AG+AA+RVLTG RWR+G +D G Sbjct: 483 DIVATLRLIAEPAAGSAALRVLTGARWRIGVADLAALSRRARELSVVRTDTAVGAEITDG 542 Query: 515 XXXXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLP 574 LADAI DPGPA+ YS+AGY+RI AL EL ALR G L Sbjct: 543 AALEAALREVTPEPVEQAGLADAIADPGPAENYSAAGYQRIEALGRELAALRERSGQPLT 602 Query: 575 DLVAEVRRVLGLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASV 634 +LVA+V R +G+ + + EHLDAFA+VVA Y A AS+ Sbjct: 603 ELVADVERTIGVGVETQARRAVLGAGAGREHLDAFAEVVAGY----------AADPGASL 652 Query: 635 DGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTAS 694 GLLA+L A VENGL P ++ VA+DRVQVLTVHAAKGLEW++VAV H+ VFPS + Sbjct: 653 GGLLAFLTAAESVENGLEPGEVEVAKDRVQVLTVHAAKGLEWEIVAVPHVVRRVFPSGTA 712 Query: 695 RSSWLTDPGELPPLLRGDR-ASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDE 753 +WL ELP LRGDR A A G+PVLD + + +R L ++AH+ L++RR+DE Sbjct: 713 GGTWLGALAELPTALRGDRVAEDAAEGVPVLDLTDLYDRADLERALAAHKAALERRRIDE 772 Query: 754 ERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQW 813 ERRL YV +TR E +LVS HHW TG P+GPSDFL ELK E + +W Sbjct: 773 ERRLFYVALTRTERVLLVSAHHWAETG-DPKGPSDFLLELKSAAETPGGPAHGAVEIARW 831 Query: 814 DPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAIS 858 D P NP D+ A WP DPL RR VE+GA LV A++ Sbjct: 832 DDPPPVDAVNPFADNPATAEWPRDPLGPRRDPVEQGAALVRAALA 876 Score = 194 bits (494), Expect = 4e-47 Identities = 112/236 (47%), Positives = 138/236 (58%), Gaps = 15/236 (6%) Query: 876 EGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPH 934 EGW ADVDALLAE V LP QL + LVEL DP +RL LP P+P Sbjct: 947 EGWAADVDALLAEHEATVRAAREVELPGQLPATALVELRADPAKLARRLRRPLPYPPNPL 1006 Query: 935 AQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVE---DLAPLQEAFAGSPWAARTP 991 A+ G AFH WVQ+++ L +LPGA + D G+ +LA +Q+AF S WA R+P Sbjct: 1007 ARRGTAFHAWVQRWFSGTRLLGFDELPGAGEPDPGEAAADAELARMQDAFLNSAWAHRSP 1066 Query: 992 IAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTG-EPPRGPEAMRQAAVQLAVYR 1050 I VEVPFE + TV+RGR+DAVF +PDG VVDWKTG EP G E A+QLA+YR Sbjct: 1067 IDVEVPFETSIAGTVIRGRMDAVFAEPDGRWVVVDWKTGAEPDPGDEP--AVAMQLAIYR 1124 Query: 1051 MAWAALRGCPESS--------VRTAFHYVRTGVTVIPDELPDGMALAELLADSDPP 1098 +AWA L V AFHYVR+G T+ P +LP LAEL+ + PP Sbjct: 1125 LAWARLMAARTGGDEQAMLHRVDAAFHYVRSGRTIAPADLPGPDELAELIRAAAPP 1180 >tr|A4XB80|A4XB80_SALTO Tax_Id=369723 SubName: Full=UvrD/REP helicase;[Salinispora tropica] Length = 1144 Score = 731 bits (1887), Expect = 0.0 Identities = 482/1144 (42%), Positives = 588/1144 (51%), Gaps = 86/1144 (7%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 PRY+P E+A L + PT EQAA+IAAP PL+V+AGAG+GKTETMAARVVWLVAN Y + Sbjct: 21 PRYTPVELAKLLRLPAPTREQAAIIAAPVEPLLVVAGAGSGKTETMAARVVWLVANSYVQ 80 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----STYHAFAGSL 118 P QVLGLTFTRKAAG+ +TYH++AG + Sbjct: 81 PEQVLGLTFTRKAAGELAHRVRTRLGQLVRRLGRNGRHPLDDPLSGEPTVATYHSYAGRV 140 Query: 119 LRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELC-TQKTPAAVTATVLRLWGQLAE 177 + +HGL EP TRLL+E WQL +V Y G++ + P+ VT VL L G+L E Sbjct: 141 VTEHGLRAGYEPATRLLTEASRWQLVDLIVRTYDGDMSEVDRMPSTVTDAVLALAGELDE 200 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLV+ L V + P G D + R L R +L+PL+ A R Sbjct: 201 HLVEPDHLSAWTGRFFADVQSRP-GRVYAD------VRRALTLAQVRLKLLPLVRAYARR 253 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 + MDF Q+ P VGE R RYRVVLLDEYQDT H+Q V L+ALFGGG Sbjct: 254 KEDFEAMDFADQLARAARVARDHPVVGEIERDRYRVVLLDEYQDTSHAQVVLLNALFGGG 313 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 +TAVGDP QSIYGWRGASA L RF T+FA +DGAPA V L TSWRN P L Sbjct: 314 HP----VTAVGDPCQSIYGWRGASAGTLDRFRTEFAQTDGAPAQVRTLTTSWRNRPEILG 369 Query: 358 LANAISAEARRRSVAVHALRSRPDAP------------AGTVRCALLADVQAERDWIADQ 405 +ANA++ R V LR+ AGTV CALL+ E DWIAD Sbjct: 370 VANALATPLRAAGARVPELRAALSVKEPIPHRTPRGFAAGTVHCALLSTYADEADWIADS 429 Query: 406 LQGHYQRAAAD-GVSP--------PTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLL 456 L +Q AA GV P PT AVLVR RG+PV+VVGL GLL Sbjct: 430 LLRAWQGAAGTPGVMPEHLPVVARPTTAVLVRLRSQIPAIESALRARGLPVDVVGLGGLL 489 Query: 457 SIPEVADLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXX 516 PEV D+V LR++ DPT GAA +R+LTG RWR+G D + Sbjct: 490 DTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARAIAAARRQLAAD 549 Query: 517 XXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDL 576 L +A+ D GPA YS+ GY R+ A A EL LR L LPDL Sbjct: 550 DEPEIVPDVLDEAT---LVEALADLGPAPAYSAEGYARLRAAAQELGLLRYRLDQSLPDL 606 Query: 577 VAEVRRVLGLDCDVRXXXXXXXXXXXX---EHLDAFADVVADYAERAAISAGSALSTKAS 633 +A+V R +GLD +V HLDA DV A + S + A+ Sbjct: 607 IADVERTIGLDVEVAVRAGRDGAGDAGLARGHLDALGDVAARF---------SGETPGAT 657 Query: 634 VDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTA 693 + LAYL A + E GL P ++ V VQVLT HAAKGLEW VVAVA LS GV+P Sbjct: 658 LSAFLAYLAAAEDEERGLAPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLSRGVWPGPV 717 Query: 694 SRSS-WLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVD 752 S WL G LP LRGD A G+PVL + ++ ++ ++ Sbjct: 718 RNSDHWLGGLGVLPFPLRGD-----ADGLPVLALAEAEEQRGVAQALADFTAAWRAHDER 772 Query: 753 EERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQ 812 EERRL YV VTR +L SGH WG +PRGPS L + + ++ G VD+ Sbjct: 773 EERRLAYVAVTRPRRLLLCSGHWWGEGTKRPRGPSALLRD----VHQACLNGGAGQVVDE 828 Query: 813 WDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXX 872 W P NP + V+ A WP DPL RR + A LV ++ Sbjct: 829 WAAEPAPDAVNPTTEVVLRAEWPADPLGARRPVLAEAATLVRRYLTDGVPTRPASGGVTA 888 Query: 873 XX--------------------IEGWTADVDALLAERA---RAVGPPTRALPNQLSVSGL 909 + W + D LLAERA R GP ALP LSV+ L Sbjct: 889 AGPPVPGASDSVADDPGGDDPEVVRWRREADLLLAERAELTRQAGPIEVALPAALSVTQL 948 Query: 910 VELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVG 969 V L RDP + L LPT P+P+A+ G AFHTW++Q +GA L D+ +LPGAAD+D Sbjct: 949 VTLRRDPAALARSLRRPLPTEPNPYARRGTAFHTWLEQRFGAGRLLDVDELPGAADADAA 1008 Query: 970 QVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKT 1029 E LA LQE F S WA RTP VEVPF + VVRGR+DAVF P G VVDWKT Sbjct: 1009 PDEALAELQERFLASEWADRTPAEVEVPFATVIAGVVVRGRMDAVFGRPGGRFDVVDWKT 1068 Query: 1030 GEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALA 1089 G P G A AAVQLAVYR+AWA L G + V AFHYVR G+TV P +L D L Sbjct: 1069 GRQPTG-AAAAAAAVQLAVYRLAWAELAGVSVAQVGAAFHYVRDGMTVRPVDLLDAAGLT 1127 Query: 1090 ELLA 1093 L+A Sbjct: 1128 ALIA 1131 >tr|A8M3F7|A8M3F7_SALAI Tax_Id=391037 SubName: Full=UvrD/REP helicase;[Salinispora arenicola] Length = 1162 Score = 728 bits (1880), Expect = 0.0 Identities = 482/1136 (42%), Positives = 585/1136 (51%), Gaps = 79/1136 (6%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 PRY+P E+A L + PT EQAAVIAAP PL+V+AGAG+GKTETMAARVVWLVAN Y Sbjct: 21 PRYTPVELAKLLRLPAPTREQAAVIAAPVEPLLVVAGAGSGKTETMAARVVWLVANSYVH 80 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----STYHAFAGSL 118 P QVLGLTFTRKAAG+ +TYH++AG + Sbjct: 81 PEQVLGLTFTRKAAGELAHRVRARLSQLVRRLGRRGRDPQDESLAGEPTIATYHSYAGRV 140 Query: 119 LRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELC-TQKTPAAVTATVLRLWGQLAE 177 + +HGL EP TRLL+E WQL +V Y G++ + P+ +T VL L G+L E Sbjct: 141 VTEHGLRAGYEPATRLLTEASRWQLVDLIVRNYDGDMSEVDRMPSTITDAVLALAGELDE 200 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 HLV+ L V + P G D + R L Q R +L+PL+ A R Sbjct: 201 HLVEPDHLAGWTGRFFADVQSRP-GRVYAD------VRRALTLQQIRLKLLPLVRAYARR 253 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 R + MDF Q+ P VGE R RYRVVLLDEYQDT H+Q V L+ALFGGG Sbjct: 254 KRDFEAMDFADQLARAARVARDHPVVGEIERDRYRVVLLDEYQDTSHAQVVLLNALFGGG 313 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 +TAVGDP QSIYGWRGASA L RF T+FA +DG PA V L TSWRN P L Sbjct: 314 HP----VTAVGDPCQSIYGWRGASAGTLDRFPTEFARADGVPAQVRTLTTSWRNRPEVLG 369 Query: 358 LANAISAEARRRSVAVHAL------------RSRPDAPAGTVRCALLADVQAERDWIADQ 405 +ANA++ R V L R+ + AGTV CALL E +WIAD Sbjct: 370 VANALATPLRAAGARVPELHAALSVKEPIPHRTPRGSAAGTVHCALLDTYADEAEWIADS 429 Query: 406 LQGHYQRAA-ADGVSP--------PTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLL 456 L +Q AA A G P PT AVLVR RG+PV+VVGL GLL Sbjct: 430 LLRAWQGAAGAPGAVPEHLPVAARPTTAVLVRLRSQIPAIESALRARGLPVDVVGLGGLL 489 Query: 457 SIPEVADLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXX 516 PEV D+V LR++ DPT GAA +R+LTG RWR+G D + Sbjct: 490 DTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARAIAAARRKLTAG 549 Query: 517 XXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDL 576 L +A+ D GPA YS+ GY R A A EL LR L LPDL Sbjct: 550 DEPEIVPDALDEAT---LVEALADLGPAPAYSAEGYARFRAAAQELGLLRYRLDQSLPDL 606 Query: 577 VAEVRRVLGLDCDVRXXXXXXXXXXXX---EHLDAFADVVADYAERAAISAGSALSTKAS 633 +A+V R +GLD +V HLDA DV A + S + A+ Sbjct: 607 IADVERTIGLDVEVAVRAGRDGAGDAGLARGHLDALGDVAARF---------SGETPGAT 657 Query: 634 VDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTA 693 + LAYL A + E GL P ++ V VQVLT HAAKGLEW VVAVA LS GV+P Sbjct: 658 LSAFLAYLAAAEDEERGLAPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLSRGVWPGPV 717 Query: 694 SRSS-WLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVD 752 S WL G LP LRGD A G+PVL+ + ++ ++ ++ Sbjct: 718 RNSDHWLGGLGVLPFPLRGD-----ADGLPVLELAEAGEQRGVAQALADFTAAWRAHDER 772 Query: 753 EERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQ 812 EERRL YV VTR +L SG+ WG + RGPS L +D+ AG VD+ Sbjct: 773 EERRLAYVAVTRPRRLLLCSGYWWGEGTKRARGPSALL---RDVHGACLDAGAGL-VVDE 828 Query: 813 WDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXX 872 W P NP + V+ A WP DPL RR + A LV ++ Sbjct: 829 WAAEPAPDAVNPTTEVVLRAEWPADPLGDRRPALAEAATLVRRFLTDGDPTTRAATGAVA 888 Query: 873 XXIEG-------------WTADVDALLAERA---RAVGPPTRALPNQLSVSGLVELARDP 916 G W + D LLAERA R GP ALP LSV+ LV L RDP Sbjct: 889 TAAPGDDDAEDDDPEVVRWRREADLLLAERAELTRHAGPVEVALPAALSVTQLVALRRDP 948 Query: 917 VGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAP 976 + L LPT P+P+A+ G AFH W++Q +GA L D+ +LPGAAD+D E LA Sbjct: 949 AALARSLRRPLPTEPNPYARRGTAFHAWLEQRFGAGRLLDVDELPGAADADAAPDEALAE 1008 Query: 977 LQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGP 1036 LQE F S WA RTP+ EVPF + VVRGR+DAVF P G VVDWKTG P GP Sbjct: 1009 LQERFLHSEWADRTPVEAEVPFATVIAGVVVRGRMDAVFGRPGGRFDVVDWKTGRQPAGP 1068 Query: 1037 EAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 A AAVQLAVYR+AWA L G P V AFHYVR G TV P +L D L L+ Sbjct: 1069 -AAAAAAVQLAVYRLAWAELAGVPVERVGAAFHYVRDGATVRPVDLLDVAGLTALI 1123 >tr|Q47SK5|Q47SK5_THEFY Tax_Id=269800 SubName: Full=Putative DNA helicase;[Thermobifida fusca] Length = 1108 Score = 664 bits (1712), Expect = 0.0 Identities = 453/1140 (39%), Positives = 566/1140 (49%), Gaps = 88/1140 (7%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M Y P ++A LG+ PT EQAAVIAAP P +V+AGAG+GK+ETMAARVVWLVANG+ Sbjct: 1 MTDVYGPAQLARLLGLPEPTPEQAAVIAAPLRPGLVVAGAGSGKSETMAARVVWLVANGH 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLR 120 P QVLGLTFTRKAA + +TY+A+A L+ Sbjct: 61 VRPEQVLGLTFTRKAAAELAERVRKRLDQLRGAGVVPDDVLDGEPTV-ATYNAYATRLVG 119 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGEL-CTQKTPAAVTATVLRLWGQLAEHL 179 DH L IEP TR+++ WQ VV+ Y G + PA V VL L +LAEHL Sbjct: 120 DHALREAIEPTTRIITPAIAWQFVHRVVSTYDGPMDAVTSAPATVVHDVLALAQELAEHL 179 Query: 180 V---DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLR-MLATQTERAELVPLLDALH 235 D R D E + PA L+R +LA Q R +L+PLL+ Sbjct: 180 CTPDDVRAYGDWLRERAAQLKKTPA------------LVRDLLAVQRHREQLLPLLEQFA 227 Query: 236 ERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFG 295 + +VMD+ Q+ P+VG R RY VVLLDEYQDT H+Q V L +LFG Sbjct: 228 QLKAEREVMDYSDQVALAARIAQRHPEVGRIERERYAVVLLDEYQDTSHAQLVLLQSLFG 287 Query: 296 GGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRA 355 +G +TAVGDP QSIYGWRGASA NL RF DF PAPV +L TS+RN R Sbjct: 288 ----NGHPVTAVGDPCQSIYGWRGASAGNLSRFPVDFPEKPDRPAPVRQLSTSFRNGERI 343 Query: 356 LHLANAISAEARRRSVAVHALRSRPD-APAGTVRCALLADVQAERDWIADQL-----QGH 409 L +A I+ R + V L P A G V CALL E +WIA+Q+ + Sbjct: 344 LEVAKRIAEPLRAAARDVPVLYPGPARAGRGRVTCALLRTETEEAEWIAEQIDRALRESA 403 Query: 410 YQRAAADGVSPPTA-----------AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSI 458 A DG+ P AVL R+ RGIPVEVVGL GL+ + Sbjct: 404 EHHTAPDGLPWPEQEHRGPLSYGDIAVLCRKRAQFPVIRRALEERGIPVEVVGLGGLIEV 463 Query: 459 PEVADLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------G 509 PEV D+VA LR++ DPTA R+LTGPRWRLG D Sbjct: 464 PEVRDIVATLRVLHDPTAANELARILTGPRWRLGPRDLVALNQRAKELAEEARRDLRGEA 523 Query: 510 PQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHL 569 + L DA+ D GP + YS+ GY+R+ AL+ EL LR + Sbjct: 524 AEARVDEEDPLRQTVLDLTAEAGSLLDALDDLGPPERYSATGYQRLQALSEELRTLRTRI 583 Query: 570 GHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALS 629 LPDL+ EV RVLGLD +V + LDAF D + S + Sbjct: 584 SQPLPDLIMEVERVLGLDIEVGARPGRDQSAARAD-LDAFVDAAVRF---------SGST 633 Query: 630 TKASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVF 689 ++ LAYL A + E+GL P + + + V+++TVHAAKGL+W +V + LS G F Sbjct: 634 DTPTLSAFLAYLTSAEDTEHGLEPGERVGSSNTVKLMTVHAAKGLQWPMVVIPGLSRGQF 693 Query: 690 PSTASR-SSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQ 748 P W LP LRGDR S +P L V KQ + A Sbjct: 694 PGVPKTVKGWTGKAASLPFALRGDRDS-----LPELADVTVQEIKQFTAAERA------- 741 Query: 749 RRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCG 808 R + E+RRL YV VTRA +++ +GH WG + RGPS+FL E++++ E G Sbjct: 742 RELMEQRRLAYVAVTRAAFSLVCTGHWWGQETQRSRGPSEFLEEIREVCETGV------G 795 Query: 809 TVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXX 868 V W P GE NP L VWP RR ER A LVA + Sbjct: 796 QVALWTDPPDEGEPNPQLVADNSVVWPPQT-DERRDAAERAAALVARYRNGEWERELALM 854 Query: 869 XXXXXX------IEGWTADVDALLAERARAVGPPTRA---LPNQLSVSGLVELARDPVGA 919 I W DV+ LL R + G P LP+ L+VS LV LARDP Sbjct: 855 NRALLRPAANRRIRDWARDVELLLRHRDQEEGAPRVIEVELPDHLTVSALVSLARDPAAL 914 Query: 920 RQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQE 979 Q++ LP P PHA+ G AFHTW+++ +G E L D +LPGAAD DL LQ Sbjct: 915 AQQIRRPLPRPPAPHARRGTAFHTWLERRFGQETLIDPHELPGAADETATGDADLDELQR 974 Query: 980 AFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDP-DGGATVVDWKTGEPPRGPEA 1038 F S WA R P+ VEVPFE +GD +VRGR+DAVF DP D VVDWKTG P Sbjct: 975 QFEQSVWADRVPLEVEVPFETIIGDRLVRGRMDAVFHDPEDDVYEVVDWKTGRLPATERE 1034 Query: 1039 MRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLADSDPP 1098 R AAVQLA YR+AWA + P VR AFHYVR VTV P++L D LA L+A P Sbjct: 1035 RRAAAVQLAAYRVAWARIADIPLERVRAAFHYVRANVTVYPEDLLDADGLAALIAAVPQP 1094 >tr|C0U8Y0|C0U8Y0_9ACTO Tax_Id=526225 SubName: Full=DNA/RNA helicase, superfamily I;[Geodermatophilus obscurus DSM 43160] Length = 1138 Score = 662 bits (1707), Expect = 0.0 Identities = 448/1106 (40%), Positives = 570/1106 (51%), Gaps = 53/1106 (4%) Query: 6 SPDEIASALGI-FPPTDEQAAVIAAPPG-PLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 +P E+A G+ + P+DEQA V++AP PLVV+AGAG+GKTETMAARV WLVAN P Sbjct: 51 TPTEVAVRCGLAYAPSDEQARVVSAPADRPLVVVAGAGSGKTETMAARVCWLVANELVAP 110 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---STYHAFAGSLLR 120 VLGLTFTRKAA + STYH +A SL+ Sbjct: 111 DAVLGLTFTRKAASELNERIRIRLGALSRHPETDPELKERLAVAMPTVSTYHGYAASLVS 170 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELC-TQKTPAAVTATVLRLWGQLAEHL 179 +HGL + +EP +L W A VV+G+ G++ Q TP VL L G+L EH Sbjct: 171 EHGLRIGVEPGAGVLGPAMCWGQAASVVSGWTGDMDDVQLTPLTTVEDVLALAGELGEHD 230 Query: 180 VDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMR 239 + +LR +LER + P +R GP + +L MLA Q R L+PL++A R R Sbjct: 231 ITADRLRAWTAQLERRIAGYPDAKGKR--GPYRPVLEMLARQRARVALLPLVEAFEARKR 288 Query: 240 AAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVD 299 AA +D Q+ T P+VG R+R+R+VLLDEYQDT Q L ALFG Sbjct: 289 AAGAIDHSDQVALAARIAVTAPEVGRRERARWRIVLLDEYQDTSVGQLRMLEALFGRTT- 347 Query: 300 DGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLA 359 G A+ AVGDP QSIYGWRGASA + RF F A L L TSWRN L +A Sbjct: 348 -GHAVLAVGDPRQSIYGWRGASAGTIERFDRTFPGVRSREAQRLTLATSWRNDGAVLAVA 406 Query: 360 NAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRA------ 413 NA++ V + L P A G V L V E + +AD+L ++ Sbjct: 407 NAVAGLLPAPEVPLPDLAPAPSAGHGLVTAGLYPTVAQETEALADRLAACWRGEDPVLPP 466 Query: 414 AADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGD 473 ADG PPT AVLVR RG+PV VVGL GLL +PEV+D+VA L ++ D Sbjct: 467 RADG-RPPTTAVLVRTRKQLPGIAAALRARGLPVTVVGLGGLLEVPEVSDVVATLTVLVD 525 Query: 474 PTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXC 533 P+AG A R+LTG RWR+G D + Sbjct: 526 PSAGDAMGRLLTGARWRIGPRDLAALESRARALVHSRKPDREDDDDTAPRPSERGS---- 581 Query: 534 LADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXX 593 + +A+ D G +S A Y R+ LAAEL LRG LG LPD+V +V RVLGL+ ++ Sbjct: 582 IVEALDDLGDPSAFSPAAYRRLRRLAAELAHLRGRLGESLPDMVDDVARVLGLETELASA 641 Query: 594 XXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPP 653 HLDA V A++ E A + S+ L YL A E E GL P Sbjct: 642 PGVSPGSARA-HLDALHAVAAEFTELAELP---------SLPAFLGYLRDAEERERGLEP 691 Query: 654 AQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPS-TASRSSWLTDPGELPPLLRG- 711 ++ V + +Q+LT H+AKGLEW VVAV ++A FPS T + SW+ DPG +P LR Sbjct: 692 GEVAVDPESIQLLTGHSAKGLEWDVVAVPGMTADQFPSRTDTSDSWVKDPGAVPVDLRTT 751 Query: 712 DRASVGALGIPVL---DTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDT 768 DR + L +PV D +AV R L D + E+ + EE RL YV VTRA+ Sbjct: 752 DREELPQLRLPVPGSGDQAAV--RAALEDYV----EEWKRFGEAEEIRLGYVAVTRAKHL 805 Query: 769 VLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDD 828 +L SG W G+KP GPS L D + R+ +AG G V W P G NP L++ Sbjct: 806 LLCSGSWW-REGVKPNGPSVLL----DTVRRACSAG--AGVVVAWAERPEEGATNPALEE 858 Query: 829 VVEAVWPTDPLAT-RRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLA 887 +WP DPL+ RR + A LVA A + +E W D D LL Sbjct: 859 WPVGMWPADPLSPPRRRALTAAAELVAGA-APHPLDAAAVLGTGDPEVERWVRDADLLLR 917 Query: 888 ERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQ 946 ER R P LP+ LSVS LV L RDP +RL +P P P A+ G AFH W++ Sbjct: 918 ERRRIARPTVEVPLPSHLSVSELVTLRRDPAELARRLRRPMPAAPAPLARRGTAFHAWLE 977 Query: 947 QFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTV 1006 + + L DL +LPG+ D L LQEAF SPWA R P+ VEVPFE P+G Sbjct: 978 ERFSVARLLDLDELPGSGDESAAPDGALTALQEAFLASPWADRQPVEVEVPFETPLGPLT 1037 Query: 1007 VRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRT 1066 +RGRIDAVF+D GG VVDWKTG PP G E + AAVQLA YR+ W+ L G P V Sbjct: 1038 LRGRIDAVFDDGGGGFEVVDWKTGPPPMGAE-LAAAAVQLAAYRLGWSRLTGVPVERVSA 1096 Query: 1067 AFHYVRTGVTVIPDELPDGMALAELL 1092 FH+V GVTV P +L D L L+ Sbjct: 1097 GFHHVAAGVTVRPVDLLDEAGLLALV 1122 >tr|C4DDU0|C4DDU0_9ACTO Tax_Id=446470 SubName: Full=DNA/RNA helicase, superfamily I;[Stackebrandtia nassauensis DSM 44728] Length = 1041 Score = 651 bits (1679), Expect = 0.0 Identities = 439/1106 (39%), Positives = 555/1106 (50%), Gaps = 81/1106 (7%) Query: 3 PRYSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYA 61 PRY+ +A LG +PPT++QA I AP P +++AGAG+GKT TMA+RVVWL+ANGYA Sbjct: 4 PRYTARALARLLGDEYPPTEQQATAIEAPLRPQLIVAGAGSGKTGTMASRVVWLIANGYA 63 Query: 62 EPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAFAGSLLRD 121 P Q+LGLTFTRKAA + STYH++A ++ + Sbjct: 64 RPEQILGLTFTRKAAAELASRIRERLARLSGLDGVGQLSGEPTV---STYHSYASGIVSE 120 Query: 122 HGLLLPIEPDTRLLSETELWQLAFEVVNGYRGEL-CTQKTPAAVTATVLRLWGQLAEHLV 180 HG + +EP T +LS + WQLA+ V G+ G++ T V VL L +L+EHL Sbjct: 121 HGPRIGLEPGT-VLSPAQTWQLAYAAVRGHDGDMSAVSLTVETVVKRVLSLSDELSEHLR 179 Query: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 + ELE+ L +R Q ++L R +L+P++ R RA Sbjct: 180 EPE-------ELEQFTQELANEIGERVGKGTQKTAQLLMALQSRLQLLPIVADYRRRKRA 232 Query: 241 AKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 +DF Q+ P+VG R R+ VVLLDEYQDT H+Q L +LFGGG Sbjct: 233 EGAVDFADQLHYAASAAAAAPEVGRVERERFGVVLLDEYQDTSHAQVELLKSLFGGGHP- 291 Query: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 +TAVGDP QSIY WRGAS L RF DF +DG A LEL SWRN L +AN Sbjct: 292 ---VTAVGDPCQSIYAWRGASTGTLSRFPGDFPHADGTEADRLELTASWRNRASILTVAN 348 Query: 361 AISAEARRRSVAVHALRSRPDAPA-GTVRCALLADVQAERDWIADQL------QGHYQRA 413 +S R V L P P G V A+L E +W+A ++ G + Sbjct: 349 TVSEPLRTMGFPVSPLE--PGVPGEGEVTAAMLNTADDEAEWVATRIYRLWADNGFAPGS 406 Query: 414 AADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGD 473 +G+ PPT AVL RR +G+PVEV+GL GLL PEV +L + L ++ Sbjct: 407 PVEGM-PPTTAVLARRRSQIPRLEKALRAKGLPVEVIGLGGLLDAPEVRELHSTLTVLAR 465 Query: 474 PTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXC 533 PTAG A MR+LTGPRWR+G D + Sbjct: 466 PTAGPAFMRLLTGPRWRIGPRDIAALHA---------RARELAPERRGFEPSAEGLNEAS 516 Query: 534 LADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXX 593 LA+A+ D G YS A ER AL EL LR L + DL+AE+ +V GLD +V Sbjct: 517 LAEALEDLGDLRRYSDAAAERYTALREELGYLRSRLDQPVSDLIAEILKVSGLDIEVAVH 576 Query: 594 XXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPP 653 E LDAF D Y A++ S+DG L+YLD A E E GL Sbjct: 577 RGDS------ERLDAFIDEAVRYTSTASLP---------SLDGFLSYLDAAEERERGLEL 621 Query: 654 AQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDR 713 T VQ+LTVHAAKGLEW VAV L+ GV P SWLTD G+LP LRGD Sbjct: 622 TGTTEHTGAVQILTVHAAKGLEWDCVAVPGLAKGVLPGKVMGGSWLTDTGKLPYPLRGDA 681 Query: 714 ASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSG 773 A +P VT +LS + ++ + EERRL YV +TRA + G Sbjct: 682 AE-----LPYFRLGGVTKAAELSRAEAEFKKDVQFHHEVEERRLAYVALTRARTHLFACG 736 Query: 774 HHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAV 833 + W G R PS +L E + AAG G VD+W P GE NPLL + A Sbjct: 737 YWWD-DGESAREPSPYLDE-------TVAAG---GRVDEWIEDP--GEENPLLATELSAD 783 Query: 834 WPT-DPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERARA 892 WP +PL + + V A V + + W + + LLAERA + Sbjct: 784 WPEPEPLGSNQITVAAAAGAVRAS---------DGALDDSAQAKRWAEEAELLLAERAES 834 Query: 893 VGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGA 951 +P+QLSVS LV D RL +P P PH + G AFH WV++ + Sbjct: 835 ASDGMEVPVPSQLSVSQLVAWHADAQEFAARLRRPVPEPPAPHTRRGTAFHAWVEKRFDG 894 Query: 952 ELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRI 1011 LFD+ DLPGAAD + +LA LQEAF S WA+RTPIAVEVPF + VVRGR+ Sbjct: 895 GTLFDMDDLPGAADGEPDTDAELAALQEAFNASEWASRTPIAVEVPFVTVLEGVVVRGRM 954 Query: 1012 DAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYV 1071 DAVF DGG +VDWKTG PPRG A + AAVQLA YR AWA LRG S V AFHYV Sbjct: 955 DAVFATDDGGYEIVDWKTGRPPRG-HAAKAAAVQLAAYREAWAVLRGVHRSKVSAAFHYV 1013 Query: 1072 RTGVTVIPDELPDGMALAELLADSDP 1097 R VTV P LP LA L + P Sbjct: 1014 RQNVTVRPSGLPLLEQLAAPLGPTPP 1039 >tr|Q8FRH0|Q8FRH0_COREF Tax_Id=152794 SubName: Full=Putative ATP-dependent DNA helicase;[Corynebacterium efficiens] Length = 1175 Score = 650 bits (1676), Expect = 0.0 Identities = 437/1121 (38%), Positives = 577/1121 (51%), Gaps = 83/1121 (7%) Query: 4 RYSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 R SP ++ LG PT +QAA+I A PGPL+V+AGAGAGKTETMAARVVWLVANG+A Sbjct: 100 RVSPVLLSKMLGQEHAPTAQQAAIIGAEPGPLLVVAGAGAGKTETMAARVVWLVANGFAA 159 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P QVLGLTFTRKAA Q STY ++ Sbjct: 160 PDQVLGLTFTRKAAQQLSQRIRQRLETLAGIPTLRDLDPSGGIARSLQAITPTVSTYDSY 219 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AGSLLR++GLLLP+EP RL+++TEL+ +A +VV+ YRGEL ++PA VT +L L + Sbjct: 220 AGSLLREYGLLLPVEPSARLITQTELYHIARQVVDNYRGELTATQSPATVTEYLLDLVSE 279 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 + H+V ++R+ L LP N +D+ Q + R TQ R + +PL++ L Sbjct: 280 MDNHMVTPDEIREESQPFINLFEELPT-HNGKDTPLPQEMARWRDTQITRLQYLPLVEQL 338 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 + + V+ FG QM PQVG R R+RVV+LDEYQDT HSQRV L +LF Sbjct: 339 KQELHDRAVITFGEQMSKAARLASRHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLRSLF 398 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDF---ALSDGAPAPVLELRTSWRN 351 GG D GL +TAVGDP+Q+IYGWRGA+A NL F DF +L AP EL TSWRN Sbjct: 399 -GGTDPGLTVTAVGDPMQAIYGWRGATAANLENFVGDFPVISLDARTDAPKRELTTSWRN 457 Query: 352 PPRALHLANAISAE----ARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQ 407 PP L LANA+S E A + V L RP AP G V+ A Q ER ++AD+L+ Sbjct: 458 PPEVLELANAVSREVLGPADAPTRTVQPLEPRPGAPTGEVQIGWFATAQEERAFVADELK 517 Query: 408 GHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 ++ + TAAVLVR+ RGIPVE+VGL+GLL +PEVAD+VA+ Sbjct: 518 KYWDARS----EKFTAAVLVRKRRHSEPMAAELRARGIPVEIVGLSGLLDVPEVADMVAI 573 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG-------------GPQXXX 514 ++ P AA+R+L GP LG +D G + Sbjct: 574 ATMLVRPQDNRAALRILGGPHVGLGIADIQVLQRRAANLAGRVRPGSPKEKEPLPEEPLE 633 Query: 515 XXXXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALR-GHLGHWL 573 L DA+ D G A +S G R+ LAA+L LR LGH + Sbjct: 634 RLAAQIADTVPTEPEEIVGLTDAVSDLGEATNFSLEGLRRLRRLAAQLRHLRTNSLGHSV 693 Query: 574 PDLVAEVRRVLGLDCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKA 632 D+ A++ V G+ +V HLD FAD VA + + Sbjct: 694 ADIFADIEEVFGIRTEVLARENPRADGATGTVHLDRFADEVAAH-------------SSV 740 Query: 633 SVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPST 692 S+ LL Y +A + E+GL P ++TV DRVQ+LTVH AKGLEW +V+V H A + + Sbjct: 741 SLPELLDYFQLARDQEDGLEPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADANTYDAK 800 Query: 693 ASRSSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVD 752 A +WL + +P LRGD G P LDTS V NR+ L + ++ + Sbjct: 801 A--FTWLKNVKHIPSSLRGDAGE----GSPELDTSGVENRRDLQAAEKEYTAEVRSSLAE 854 Query: 753 EERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQ 812 E RL YVG+TR+E ++V+G T + + P L LK A P V Sbjct: 855 ENSRLFYVGITRSERALMVTGSAIDGTTTRAKVPYAHLETLK--------ATAPDAVVTW 906 Query: 813 WDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXX 872 W+ E+ P EA++P T V GA LV S Sbjct: 907 WEGEEADVEKLP----AEEAMYPA---VTIPPGVAEGAELVRATPSDASFDGGIE----- 954 Query: 873 XXIEGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRP 931 E W +V L+ E R P + +L+ + LV L +P +RL +P +P Sbjct: 955 ---ELWEREVTVLIDEHRRLQSPTLEVEISRELTATDLVNLKNNPEQFARRLRRPVPFKP 1011 Query: 932 DPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTP 991 + +A+ G FH W++ +GA L D LPG D ++ + + L+ AF S WA RTP Sbjct: 1012 NTYAKRGTQFHQWLEDRFGASALLDEDQLPG-MDEELSE-QTFEELRAAFLESRWADRTP 1069 Query: 992 IAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRM 1051 VE PFE+ +G V+RGR+DAVF +PD VVDWKTG+ PRG E M A +QLAVYR+ Sbjct: 1070 NYVEHPFEVVIGRHVIRGRMDAVFHEPDDTWLVVDWKTGQTPRGAE-MDAAIIQLAVYRI 1128 Query: 1052 AWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 AWA+LRG VR AFHYV T PD LPD LA LL Sbjct: 1129 AWASLRGIDPQQVRGAFHYVAHNHTFEPDHLPDAGELALLL 1169 >tr|C8NLR1|C8NLR1_COREF Tax_Id=196164 SubName: Full=Probable dna helicase II protein; EC=3.6.1.-;[Corynebacterium efficiens YS-314] Length = 1067 Score = 648 bits (1672), Expect = 0.0 Identities = 432/1105 (39%), Positives = 570/1105 (51%), Gaps = 82/1105 (7%) Query: 19 PTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGLTFTRKAAGQ 78 PT +QAA+I A PGPL+V+AGAGAGKTETMAARVVWLVANG+A P QVLGLTFTRKAA Q Sbjct: 8 PTAQQAAIIGAEPGPLLVVAGAGAGKTETMAARVVWLVANGFAAPDQVLGLTFTRKAAQQ 67 Query: 79 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGSLLRDHGLLLPIEP 130 STY ++AGSLLR++GLLLP+EP Sbjct: 68 LSQRIRQRLETLAGIPTLRDLDPSGGIARSLQAITPTVSTYDSYAGSLLREYGLLLPVEP 127 Query: 131 DTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVDTRQLRDTHI 190 RL+++TEL+ +A +VV+ YRGEL ++PA VT +L L ++ H+V ++R+ Sbjct: 128 SARLITQTELYHIARQVVDNYRGELTATQSPATVTEYLLDLVSEMDNHMVTPDEIREESQ 187 Query: 191 ELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAAKVMDFGMQM 250 L LP N +D+ Q + R TQ R + +PL++ L + + V+ FG QM Sbjct: 188 PFINLFEELPT-HNGKDTPLPQEMARWRDTQITRLQYLPLVEQLKQELHDRAVITFGEQM 246 Query: 251 XXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDGLALTAVGDP 310 PQVG R R+RVV+LDEYQDT HSQRV L +LF GG D GL +TAVGDP Sbjct: 247 SKAARLASRHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLRSLF-GGTDPGLTVTAVGDP 305 Query: 311 IQSIYGWRGASATNLPRFSTDF---ALSDGAPAPVLELRTSWRNPPRALHLANAISAE-- 365 +Q+IYGWRGA+A NL F DF +L AP EL TSWRNPP L LANA+S E Sbjct: 306 MQAIYGWRGATAANLENFVGDFPVISLDARTDAPKRELTTSWRNPPEVLELANAVSREVL 365 Query: 366 --ARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 A + V L RP AP G V+ A Q ER ++AD+L+ ++ + TA Sbjct: 366 GPADAPTRTVQPLEPRPGAPTGEVQIGWFATAQEERAFVADELKKYWDARS----EKFTA 421 Query: 424 AVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRV 483 AVLVR+ RGIPVE+VGL+GLL +PEVAD+VA+ ++ P AA+R+ Sbjct: 422 AVLVRKRRHSEPMAAELRARGIPVEIVGLSGLLDVPEVADMVAIATMLVRPQDNRAALRI 481 Query: 484 LTGPRWRLGGSDXXXXXXXXXXXXG-------------GPQXXXXXXXXXXXXXXXXXXX 530 L GP LG +D G + Sbjct: 482 LGGPHVGLGIADIQVLQRRAANLAGRVRPGSPKEKEPLPEEPLERLAAQIADTVPTEPEE 541 Query: 531 XXCLADAICDPGPADWYSSAGYERIGALAAELNALR-GHLGHWLPDLVAEVRRVLGLDCD 589 L DA+ D G A +S G R+ LAA+L LR LGH + D+ A++ V G+ + Sbjct: 542 IVGLTDAVSDLGEATNFSLEGLRRLRRLAAQLRHLRTNSLGHSVADIFADIEEVFGIRTE 601 Query: 590 V-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVE 648 V HLD FAD VA + + S+ LL Y +A + E Sbjct: 602 VLARENPRADGATGTVHLDRFADEVAAH-------------SSVSLPELLDYFQLARDQE 648 Query: 649 NGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPL 708 +GL P ++TV DRVQ+LTVH AKGLEW +V+V H A + + A +WL + +P Sbjct: 649 DGLEPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADANTYDAKA--FTWLKNVKHIPSS 706 Query: 709 LRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDT 768 LRGD G P LDTS V NR+ L + ++ +E RL YVG+TR+E Sbjct: 707 LRGDAGE----GSPELDTSGVENRRDLQAAEKEYTAEVRSSLAEENSRLFYVGITRSERA 762 Query: 769 VLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDD 828 ++V+G T + + P L LK A P V W+ E+ P Sbjct: 763 LMVTGSAIDGTTTRAKVPYAHLETLK--------ATAPDAVVTWWEGEEADVEKLP---- 810 Query: 829 VVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAE 888 EA++P T V GA LV S E W +V L+ E Sbjct: 811 AEEAMYPA---VTIPPGVAEGAELVRATPSDASFDGGIE--------ELWEREVTVLIDE 859 Query: 889 RARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQ 947 R P + +L+ + LV L +P +RL +P +P+ +A+ G FH W++ Sbjct: 860 HRRLQSPTLEVEISRELTATDLVNLKNNPEQFARRLRRPVPFKPNTYAKRGTQFHQWLED 919 Query: 948 FYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVV 1007 +GA L D LPG D ++ + + L+ AF S WA RTP VE PFE+ +G V+ Sbjct: 920 RFGASALLDEDQLPG-MDEELSE-QTFEELRAAFLESRWADRTPNYVEHPFEVVIGRHVI 977 Query: 1008 RGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTA 1067 RGR+DAVF +PD VVDWKTG+ PRG E M A +QLAVYR+AWA+LRG VR A Sbjct: 978 RGRMDAVFHEPDDTWLVVDWKTGQTPRGAE-MDAAIIQLAVYRIAWASLRGIDPQQVRGA 1036 Query: 1068 FHYVRTGVTVIPDELPDGMALAELL 1092 FHYV T PD LPD LA LL Sbjct: 1037 FHYVAHNHTFEPDHLPDAGELALLL 1061 >tr|C6WM78|C6WM78_ACTMD Tax_Id=446462 SubName: Full=UvrD/REP helicase;[Actinosynnema mirum] Length = 1349 Score = 648 bits (1672), Expect = 0.0 Identities = 388/866 (44%), Positives = 482/866 (55%), Gaps = 40/866 (4%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P SP +IA ALG+ PPT EQAAVIA+P P +V+AGAGAGKTETMAARVV+LVANG Sbjct: 17 PHASPADIADALGLHPPTPEQAAVIASPAAPALVVAGAGAGKTETMAARVVYLVANGVVT 76 Query: 63 PGQVLGLTFTRKAA--------GQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTYHAF 114 P +VLGLTFTRKAA G+ TYHA+ Sbjct: 77 PDRVLGLTFTRKAARQLGERVRGRLRRLAGSPLLDELDPSGRRRAAVLTTEPVVLTYHAY 136 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG L+ +HGL LP+EP RLL+ET WQLA VV+ + +L T K P +T+ +L L G+ Sbjct: 137 AGRLVGEHGLRLPVEPGVRLLTETAAWQLAHRVVSAWTQDLDTDKIPTTITSYLLSLAGE 196 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 L EHLV+ QL L L+ P P Q+D+ P + L ++ Q R L+PLLDA Sbjct: 197 LGEHLVEPEQLLAHAEHLCALIEHAPKAPRQKDALPEK-LQEIVDAQRLRVALLPLLDAY 255 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 R R V+DF QM P+V E R RY VLLDEYQDTGH+QRV L ALF Sbjct: 256 RARKRRDAVLDFADQMSLAARLATGHPEVVEGERERYGAVLLDEYQDTGHAQRVLLRALF 315 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPR 354 G G D + +T+VGDP Q+IYGWRGASA NLPRF DF PA EL TS+RNPP Sbjct: 316 GDG--DPMPVTSVGDPAQAIYGWRGASAANLPRFREDFP-----PADKYELLTSFRNPPE 368 Query: 355 ALHLANAISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAA 414 LHLANA+S R + V LR R G VR L DV+AE +W+AD + ++ Sbjct: 369 VLHLANAVSGPLRAAGLDVAPLRHREGVEPGDVRIGLFPDVRAELEWLADTVAEQWRAHV 428 Query: 415 ADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDP 474 PPTAAVLVRR RG+PVEVVGL GLL PEV DL + LR++ DP Sbjct: 429 DTSDEPPTAAVLVRRRSDMPAIAAVLRDRGLPVEVVGLGGLLDEPEVRDLTSALRVLVDP 488 Query: 475 TAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGP---QXXXXXXXXXXXXXXXXXXXX 531 AG AA R+LTG RWR+ D G P Sbjct: 489 LAGTAATRLLTGSRWRIAAFDLAAMWQRARDLAGAPARKSPDEDPLSVLADALPGEHSEQ 548 Query: 532 XCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVR 591 LADA+ DPG YS+ GY RI L AEL ALR L LP+LVA+V R L LD + Sbjct: 549 AGLADALDDPGDPSAYSAEGYRRIRRLGAELAALRRRLTQPLPELVADVERTLLLDIEA- 607 Query: 592 XXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGL 651 HLDAFADVV+D+A A S A++ LL YL A E+GL Sbjct: 608 ---VARPGGVGRAHLDAFADVVSDFA---------AASPAATLPALLDYLRTAEHAEDGL 655 Query: 652 PPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRG 711 P ++ V +RVQ++T+H+AKGLEW++VAV H+ VFP +SWL ELP LRG Sbjct: 656 APGEVEVVDNRVQLVTMHSAKGLEWRIVAVPHVVKDVFPGRRKSASWLKSVTELPAALRG 715 Query: 712 DRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLV 771 D A +P L NRK++ + + H ++ ++RR+ EERRLLYV +TR+E ++LV Sbjct: 716 D-----AQDLPELRVPGGANRKEVEEALDRHADEFEERRLVEERRLLYVALTRSEHSLLV 770 Query: 772 SGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVE 831 SGH WG TG P+GPS FL EL++++ A P V W PAP + NPL Sbjct: 771 SGHWWGETGATPKGPSAFLTELREVV---TTAEHPPADVAHWAPAPGPEDENPLAAKAKT 827 Query: 832 AVWPTDPLATRRGDVERGARLVAEAI 857 A WP DPL +RR V GA +V A+ Sbjct: 828 AQWPADPLGSRRDAVSAGAAMVVAAL 853 Score = 213 bits (542), Expect = 1e-52 Identities = 119/218 (54%), Positives = 139/218 (63%), Gaps = 2/218 (0%) Query: 876 EGWTADVDALLAERARAVGPPTRAL-PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPH 934 EGW DVD LLAERA A+ R L P LSVS LVELA DP +RL LP P+P Sbjct: 1123 EGWARDVDVLLAERAAAMDRRERVLLPEHLSVSQLVELATDPDQLARRLRRPLPFPPNPL 1182 Query: 935 AQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAV 994 A+ G AFHTW+++ +GA L +L +LPGAAD D +L LQEAF S WA RTP AV Sbjct: 1183 ARRGTAFHTWLERRFGAVRLLELDELPGAADEDAVPDGELGRLQEAFLASAWADRTPHAV 1242 Query: 995 EVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWA 1054 EVPFE V VRGR+DAVF DPDGG TVVDWKTG P + + +VQLA YR+AWA Sbjct: 1243 EVPFEAEVDGLAVRGRMDAVFADPDGGWTVVDWKTGRVPEA-DRVPSLSVQLAAYRLAWA 1301 Query: 1055 ALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 +L G P VR AFHYVR T+ P +L D L L+ Sbjct: 1302 SLSGSPVELVRAAFHYVRDDRTLRPADLLDAEGLRALI 1339 >tr|Q8NSA3|Q8NSA3_CORGL Tax_Id=1718 SubName: Full=Superfamily I DNA and RNA helicases;[Corynebacterium glutamicum] Length = 1073 Score = 644 bits (1662), Expect = 0.0 Identities = 430/1122 (38%), Positives = 578/1122 (51%), Gaps = 88/1122 (7%) Query: 4 RYSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 R SP ++ LG PTD+Q+A+I + PGPL+V+AGAGAGKTETMAARVVWLVANG+ Sbjct: 6 RISPRLLSQYLGQEHAPTDQQSAIIGSEPGPLLVVAGAGAGKTETMAARVVWLVANGFVA 65 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P QVLGLTFTRKAA Q STY ++ Sbjct: 66 PDQVLGLTFTRKAAQQLSQRIRKRLETLAGVPRLKDIDPTGQLEKNLQAITPTVSTYDSY 125 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG+L+R++GLLLP+EP RL+++TEL+ +A VVN Y GEL +TPA VT +L+L + Sbjct: 126 AGTLIREYGLLLPVEPSARLITQTELYHIARNVVNNYDGELTATQTPATVTEYLLKLVSE 185 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 + H+V +R+ +L LP G QRD+ N + + TQ R + +PL+ AL Sbjct: 186 MDNHMVTAEDIREESDPFIKLFDELPKGKGQRDN-LNAEMTKWRDTQVARLQYLPLVKAL 244 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 E + V+ FG QM T PQVG R R+RVV+LDEYQDT HSQRV LS+LF Sbjct: 245 KEELHNQAVVTFGEQMSKAAHLASTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLSSLF 304 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFA---LSDGAPAPVLELRTSWRN 351 GG D GL + AVGDP+Q+IYGWRGA+A NL F DF L AP EL TSWRN Sbjct: 305 -GGTDPGLTVNAVGDPMQAIYGWRGATAANLENFVDDFPVIHLDGKTRAPKNELTTSWRN 363 Query: 352 PPRALHLANAISAEARRRSVA----VHALRSRPDAPAGTVRCALLADVQAERDWIADQLQ 407 PP L LANA+S E A V L+ R AP G V ER+++AD++ Sbjct: 364 PPEVLTLANAVSREVLGSPDAPTRTVQPLQPREGAPTGEVSLGWFGTAAQEREFVADEMV 423 Query: 408 GHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 H+ G TAAVLVR+ RGIPVE+VGL+GLL IPE+ADL+++ Sbjct: 424 KHWNAREEKGTF--TAAVLVRKKRHSAPMAEELTKRGIPVEIVGLSGLLDIPEIADLISL 481 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------GPQXXXXXXX 518 ++ P AA+R+L GP LG +D G P Sbjct: 482 ATMLVRPHDNRAALRILAGPHVGLGVADLQRLQGRARNIAGRVSRERREKNPDPLAELDA 541 Query: 519 XXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGH-LGHWLPDLV 577 LADA+ D G D +S G R+ LA +L LR + LG + D+ Sbjct: 542 IIEEATAIEPEAVVGLADAVADLGEGDRFSEEGLSRLKRLATQLRYLRKYSLGRSVADIF 601 Query: 578 AEVRRVLGLDCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDG 636 A++ V + +V HLD FA+ VA + + Sbjct: 602 ADIETVFNIRTEVLSRQDPHADGAAGTVHLDKFAEEVASHG-------------GIGLPE 648 Query: 637 LLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRS 696 LL Y ++A + E GL P ++TV DRVQ+LTVH AKGLEW +V+V H A + + A S Sbjct: 649 LLDYFELAKDQEEGLEPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADASTYDAKA--S 706 Query: 697 SWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERR 756 +WL + +P LRGD + G P +DTS +RK L D+ + ++ + +E R Sbjct: 707 TWLKNVTMIPSSLRGDAGT----GAPEMDTSEADDRKALEDSGKEYTSEVREGLREENSR 762 Query: 757 LLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAA---GDPCGTVDQW 813 L YVG+TR+E +LV+G +G K + P L L+D + G+ G V++ Sbjct: 763 LFYVGITRSERVLLVTGSALDESGTKAKVPYGHLEILRDKAPECVVSWWEGEE-GDVEKQ 821 Query: 814 DPAPVAGERNPLLDDVVEAVWPTDPLATRRG-DVERGARLVAEAISXXXXXXXXXXXXXX 872 PA E V+P A G D+ RG R AE + Sbjct: 822 KPA--------------EGVFPQLLAADSSGADLVRGPR--AEPNNEGGLESL------- 858 Query: 873 XXIEGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRP 931 W +V AL+ E R P P +L+ + LV + +P +R+ +P +P Sbjct: 859 -----WEKEVSALIDEHRRLSNPIVEVETPRELTATDLVSMKNNPEQFARRMRRPVPFKP 913 Query: 932 DPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTP 991 + +A+ G FH W++ +G+ L D +LPG D D + L++AF GS W RTP Sbjct: 914 NTYAKRGTLFHQWLEDRFGSTALLDETELPG-IDEDYSD-DAFIELRDAFLGSTWENRTP 971 Query: 992 IAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRM 1051 VE PFE+ +G+ V+RGR+DAVF DG VVDWKTG P GPE M A +QLAVYR+ Sbjct: 972 EFVEHPFEVTIGEHVIRGRMDAVFH-TDGTWMVVDWKTGRTPTGPE-MDAAIIQLAVYRL 1029 Query: 1052 AWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA 1093 AWA L+G VR AFHYV T P++LP LA LL+ Sbjct: 1030 AWARLKGLEPEEVRAAFHYVAHDHTFEPNDLPTQEELARLLS 1071 >tr|Q6M705|Q6M705_CORGL Tax_Id=1718 SubName: Full=PROBABLE DNA HELICASE II PROTEIN; EC=3.6.1.-;[Corynebacterium glutamicum] Length = 1070 Score = 644 bits (1662), Expect = 0.0 Identities = 430/1122 (38%), Positives = 578/1122 (51%), Gaps = 88/1122 (7%) Query: 4 RYSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 R SP ++ LG PTD+Q+A+I + PGPL+V+AGAGAGKTETMAARVVWLVANG+ Sbjct: 3 RISPRLLSQYLGQEHAPTDQQSAIIGSEPGPLLVVAGAGAGKTETMAARVVWLVANGFVA 62 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P QVLGLTFTRKAA Q STY ++ Sbjct: 63 PDQVLGLTFTRKAAQQLSQRIRKRLETLAGVPRLKDIDPTGQLEKNLQAITPTVSTYDSY 122 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG+L+R++GLLLP+EP RL+++TEL+ +A VVN Y GEL +TPA VT +L+L + Sbjct: 123 AGTLIREYGLLLPVEPSARLITQTELYHIARNVVNNYDGELTATQTPATVTEYLLKLVSE 182 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 + H+V +R+ +L LP G QRD+ N + + TQ R + +PL+ AL Sbjct: 183 MDNHMVTAEDIREESDPFIKLFDELPKGKGQRDN-LNAEMTKWRDTQVARLQYLPLVKAL 241 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 E + V+ FG QM T PQVG R R+RVV+LDEYQDT HSQRV LS+LF Sbjct: 242 KEELHNQAVVTFGEQMSKAAHLASTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLSSLF 301 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFA---LSDGAPAPVLELRTSWRN 351 GG D GL + AVGDP+Q+IYGWRGA+A NL F DF L AP EL TSWRN Sbjct: 302 -GGTDPGLTVNAVGDPMQAIYGWRGATAANLENFVDDFPVIHLDGKTRAPKNELTTSWRN 360 Query: 352 PPRALHLANAISAEARRRSVA----VHALRSRPDAPAGTVRCALLADVQAERDWIADQLQ 407 PP L LANA+S E A V L+ R AP G V ER+++AD++ Sbjct: 361 PPEVLTLANAVSREVLGSPDAPTRTVQPLQPREGAPTGEVSLGWFGTAAQEREFVADEMV 420 Query: 408 GHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 H+ G TAAVLVR+ RGIPVE+VGL+GLL IPE+ADL+++ Sbjct: 421 KHWNAREEKGTF--TAAVLVRKKRHSAPMAEELTKRGIPVEIVGLSGLLDIPEIADLISL 478 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------GPQXXXXXXX 518 ++ P AA+R+L GP LG +D G P Sbjct: 479 ATMLVRPHDNRAALRILAGPHVGLGVADLQRLQGRARNIAGRVSRERREKNPDPLAELDA 538 Query: 519 XXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGH-LGHWLPDLV 577 LADA+ D G D +S G R+ LA +L LR + LG + D+ Sbjct: 539 IIEEATAIEPEAVVGLADAVADLGEGDRFSEEGLSRLKRLATQLRYLRKYSLGRSVADIF 598 Query: 578 AEVRRVLGLDCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDG 636 A++ V + +V HLD FA+ VA + + Sbjct: 599 ADIETVFNIRTEVLSRQDPHADGAAGTVHLDKFAEEVASHG-------------GIGLPE 645 Query: 637 LLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRS 696 LL Y ++A + E GL P ++TV DRVQ+LTVH AKGLEW +V+V H A + + A S Sbjct: 646 LLDYFELAKDQEEGLEPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADASTYDAKA--S 703 Query: 697 SWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERR 756 +WL + +P LRGD + G P +DTS +RK L D+ + ++ + +E R Sbjct: 704 TWLKNVTMIPSSLRGDAGT----GAPEMDTSEADDRKALEDSGKEYTSEVREGLREENSR 759 Query: 757 LLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAA---GDPCGTVDQW 813 L YVG+TR+E +LV+G +G K + P L L+D + G+ G V++ Sbjct: 760 LFYVGITRSERVLLVTGSALDESGTKAKVPYGHLEILRDKAPECVVSWWEGEE-GDVEKQ 818 Query: 814 DPAPVAGERNPLLDDVVEAVWPTDPLATRRG-DVERGARLVAEAISXXXXXXXXXXXXXX 872 PA E V+P A G D+ RG R AE + Sbjct: 819 KPA--------------EGVFPQLLAADSSGADLVRGPR--AEPNNEGGLESL------- 855 Query: 873 XXIEGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRP 931 W +V AL+ E R P P +L+ + LV + +P +R+ +P +P Sbjct: 856 -----WEKEVSALIDEHRRLSNPIVEVETPRELTATDLVSMKNNPEQFARRMRRPVPFKP 910 Query: 932 DPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTP 991 + +A+ G FH W++ +G+ L D +LPG D D + L++AF GS W RTP Sbjct: 911 NTYAKRGTLFHQWLEDRFGSTALLDETELPG-IDEDYSD-DAFIELRDAFLGSTWENRTP 968 Query: 992 IAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRM 1051 VE PFE+ +G+ V+RGR+DAVF DG VVDWKTG P GPE M A +QLAVYR+ Sbjct: 969 EFVEHPFEVTIGEHVIRGRMDAVFH-TDGTWMVVDWKTGRTPTGPE-MDAAIIQLAVYRL 1026 Query: 1052 AWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA 1093 AWA L+G VR AFHYV T P++LP LA LL+ Sbjct: 1027 AWARLKGLEPEEVRAAFHYVAHDHTFEPNDLPTQEELARLLS 1068 >tr|A4QCB1|A4QCB1_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 1070 Score = 643 bits (1658), Expect = 0.0 Identities = 426/1118 (38%), Positives = 574/1118 (51%), Gaps = 80/1118 (7%) Query: 4 RYSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 R SP ++ LG PTD+Q+A+I + PGPL+V+AGAGAGKTETMAARVVWLVANG+ Sbjct: 3 RISPRLLSQYLGQEHAPTDQQSAIIGSEPGPLLVVAGAGAGKTETMAARVVWLVANGFVA 62 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAF 114 P QVLGLTFTRKAA Q STY ++ Sbjct: 63 PDQVLGLTFTRKAAQQLSQRIRKRLETLAGVPRLKDIDPTGQLEKNLQAITPTVSTYDSY 122 Query: 115 AGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQ 174 AG+L+R++GLLLP+EP RL+++TEL+ +A VVN Y GEL +TPA VT +L+L + Sbjct: 123 AGTLIREYGLLLPVEPSARLITQTELYHIARNVVNNYDGELTATQTPATVTEYLLKLVSE 182 Query: 175 LAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDAL 234 + H+V +R+ +L LP G QRD+ N + + TQ R + +PL+ AL Sbjct: 183 MDNHMVTAEDIREESDPFIKLFDELPKGKGQRDN-LNAEMTKWRDTQVARLQYLPLVKAL 241 Query: 235 HERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALF 294 E + V+ FG QM T PQVG R R+RVV+LDEYQDT HSQRV LS+LF Sbjct: 242 KEELHNQAVVTFGEQMSKAAHLASTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLSSLF 301 Query: 295 GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFA---LSDGAPAPVLELRTSWRN 351 GG D GL + AVGDP+Q+IYGWRGA+A NL F DF L AP EL TSWRN Sbjct: 302 -GGTDPGLTVNAVGDPMQAIYGWRGATAANLENFVDDFPVIHLDGKTRAPKNELTTSWRN 360 Query: 352 PPRALHLANAISAEARRRSVA----VHALRSRPDAPAGTVRCALLADVQAERDWIADQLQ 407 PP L LANA+S E A V L+ R AP G V ER+++AD++ Sbjct: 361 PPEVLTLANAVSREVLGSPDAPTRTVQPLQPREGAPTGEVSLGWFGTAAQEREFVADEMV 420 Query: 408 GHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 H+ G TAAVLVR+ RGIPVE+VGL+GLL IPE+ADL+++ Sbjct: 421 KHWNAREEKGTF--TAAVLVRKKRHSAPMAEELTKRGIPVEIVGLSGLLDIPEIADLISL 478 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------GPQXXXXXXX 518 ++ P AA+R+L GP LG +D G Sbjct: 479 ATMLVRPQDNRAALRILAGPHVGLGVADLQRLQGRARNIAGRVSRERREKNSDPLAELDA 538 Query: 519 XXXXXXXXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGH-LGHWLPDLV 577 LADA+ D G D +S G R+ LA +L LR + LG + D+ Sbjct: 539 IIEEATAVEPEAVVGLADAVADLGEGDRFSEEGLSRLKRLATQLRYLRKYSLGRSVADIF 598 Query: 578 AEVRRVLGLDCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDG 636 A++ V + +V HLD FA+ VA + + Sbjct: 599 ADIETVFNIRTEVLSRQDPHADGAAGTVHLDKFAEEVASHG-------------GIGLPE 645 Query: 637 LLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRS 696 LL Y ++A + E GL P ++TV DRVQ+LTVH AKGLEW +V+V H A + + A S Sbjct: 646 LLDYFELAKDQEEGLEPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADASTYDAKA--S 703 Query: 697 SWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERR 756 +WL + +P LRGD + G P +DTS +RK L D+ + ++ + +E R Sbjct: 704 TWLKNVTMIPSSLRGDAGT----GAPEMDTSEADDRKALEDSGKEYTSEVREGLREENSR 759 Query: 757 LLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPA 816 L YVG+TR+E +LV+G +G K + P L L+D P V W+ Sbjct: 760 LFYVGITRSERVLLVTGSALDESGTKAKVPYGHLEILRD--------KAPECVVSWWEGE 811 Query: 817 PVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIE 876 E+ + V + TD + D+ RG R AE + Sbjct: 812 EGDVEKQKPAEGVFPQLLATD---SSGADLVRGPR--AEPNNEGGLESL----------- 855 Query: 877 GWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHA 935 W +V AL+ E R P P +L+ + LV + +P +R+ +P +P+ +A Sbjct: 856 -WEKEVSALIDEHRRLSNPIVEVETPRELTATDLVSMKNNPEQFARRMRRPVPFKPNTYA 914 Query: 936 QLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVE 995 + G FH W++ +G+ L D +LPG D D + L++AF GS W RTP VE Sbjct: 915 KRGTLFHQWLEDRFGSTALLDETELPG-IDEDYSD-DAFIELRDAFLGSTWENRTPEFVE 972 Query: 996 VPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAA 1055 PFE+ +G+ V+RGR+DAVF DG VVDWKTG P GPE M A +QLAVYR+AWA Sbjct: 973 HPFEVTIGEHVIRGRMDAVFH-TDGTWMVVDWKTGRTPTGPE-MDAAIIQLAVYRLAWAR 1030 Query: 1056 LRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA 1093 L+G VR AFHYV T P++LP LA LL+ Sbjct: 1031 LKGLEPEEVRAAFHYVAHDHTFEPNDLPTQEELARLLS 1068 >tr|A6W771|A6W771_KINRD Tax_Id=266940 SubName: Full=UvrD/REP helicase;[Kineococcus radiotolerans] Length = 1128 Score = 640 bits (1652), Expect = 0.0 Identities = 466/1155 (40%), Positives = 566/1155 (49%), Gaps = 85/1155 (7%) Query: 1 MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY 60 M+ R S EIA LG PT EQ AVI AP P++V+AGAG+GKTETM++RVVWLVAN Sbjct: 1 MSARLSAVEIAQRLGRPTPTPEQVAVIEAPVEPVLVVAGAGSGKTETMSSRVVWLVANEL 60 Query: 61 AEPGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------ST 110 P VLGLTFTRKAAG+ ST Sbjct: 61 VAPEDVLGLTFTRKAAGELAERVRRRLRGLRAVGLGPAPAPGAGADGPHGLGDGEPVVST 120 Query: 111 YHAFAGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELC-TQKTPAAVTATVL 169 YHA+A SL+ DHGL L +EP + +LS+ WQLA +VV + G+L + P+ + A ++ Sbjct: 121 YHAYAASLVTDHGLRLGVEPQSTVLSDAGAWQLASDVVESWLGDLPGVEAAPSTLAAALV 180 Query: 170 RLWGQLAEHLVDTRQLRDTHIELERLVHALPAGPNQR-------DSGPNQWLLRMLATQT 222 +L G+ AEHLVD +L +LE V ALP P + +LA Q Sbjct: 181 QLAGECAEHLVDPGELVSFVDDLETRVRALPKDDRSVAKLGAHVPGEPYAKVRDLLAVQR 240 Query: 223 ERAELVPLLDALHERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDT 282 R +VPLL+ R R A+ +DFG Q+ P V R+R+RVVLLDEYQDT Sbjct: 241 ARKAVVPLLEEYVRRKRDAEQLDFGDQVLLAARLAREVPAVAAGERARHRVVLLDEYQDT 300 Query: 283 GHSQRVALSALFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPV 342 ++Q + L ALFG G +TAVGDP QSIYGWRGASA NL RF F +DG PA Sbjct: 301 SYAQLMLLRALFGAGHP----VTAVGDPHQSIYGWRGASAGNLGRFPGHFPRADGTPAAR 356 Query: 343 LELRTSWRNPPRALHLANAISA--EARRRSVAVHALRSRPDAPAGTVRCALLADVQAERD 400 L L TSWRN L AN ++A A + AV LR RP A G VR A A V+ E Sbjct: 357 LPLATSWRNDEAVLAAANLVAAPLNAAPGAGAVAVLRPRPGAGTGRVRAAFSATVEEEAA 416 Query: 401 ---------WIADQLQGHYQRAA--ADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEV 449 W AD + QR AD TAAVL R+ G+PVEV Sbjct: 417 EVAARLAEVWRADSERLAVQRRVPGADPRPRRTAAVLCRKRSQFTVLQRALRDAGLPVEV 476 Query: 450 VGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXX-- 507 VGL GLL+ PEVAD+VA L ++ DP G R+LTG RWRLG D Sbjct: 477 VGLGGLLTTPEVADVVATLHVLHDPARGDHLARLLTGARWRLGARDLAALGAWARHLQHR 536 Query: 508 --GGPQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGPADWYSSAG-------YERIGAL 558 G P L +A+ D A W G + R+ L Sbjct: 537 RAGLPPDPHEPGEEPLVLPDEVEAVS--LVEALDDLPGAGWSGPDGRSLSPRAHARLSRL 594 Query: 559 AAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAE 618 AA L LR +PDLV EV R L LD +V +LDA AD A + Sbjct: 595 AAVLRRLRNRTHLPVPDLVGEVERALLLDVEVAARPGSSPASARA-NLDALADAAASF-- 651 Query: 619 RAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQV 678 SA S + + G LA+LD A E GL V+ D VQ+LTVHA+KGLEW V Sbjct: 652 -------SAGSQRPGLGGFLAWLDAAEVRERGLEQGASEVSTDAVQLLTVHASKGLEWDV 704 Query: 679 VAVAHLSAGVFPSTASRS-SWLTDPGEL---PPLLRGDRASVGALGIPVLDTSAVTNRKQ 734 VAV L FP++ WL G L P LRGDR G+P D +K+ Sbjct: 705 VAVPGLVERTFPASGETDPGWLGGSGALGVLPYPLRGDRE-----GLPRFDVEGAGTQKE 759 Query: 735 LSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELK 794 L E Q ++ EERRL YV TRA++ +L+SG HW KPR PS FL + Sbjct: 760 LDTARQRFLEACGQHQLAEERRLAYVAFTRAKEELLLSGAHWDDAA-KPREPSRFL---R 815 Query: 795 DIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVA 854 +++E A P V PAP G NP + VWP DPLA+RR +V GA LV Sbjct: 816 EVLEAPRGAV-PGLVVVPPAPAPEPGAPNPRTANPQRVVWPVDPLASRRVEVAAGAALVR 874 Query: 855 EAISXXXXXXXXXXXXXXXX-------IEGWTADVDALLAERARAVGPPTRALPNQLSVS 907 A++ W LL ERA A P LP LS S Sbjct: 875 AAMAERAAGGAAGPEAGGPEGGAVDEETAAWAEQSRLLLTERATAHDAPGVLLPAHLSAS 934 Query: 908 GLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSD 967 LV LA+DP +L +P P P + G AFH W++Q + A L DL DLPG+AD D Sbjct: 935 RLVTLAQDPDALALQLRRPVPQEPRPATRRGTAFHAWLEQRFTASSLLDLVDLPGSADED 994 Query: 968 VGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFE--DPDGGA--T 1023 +L LQ F S WAAR P+AVEV E PV D VVRGR+DAVF DG Sbjct: 995 AADDAELEALQRRFLASEWAARDPVAVEVSVETPVADLVVRGRVDAVFAAVGADGRTRWD 1054 Query: 1024 VVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELP 1083 VVDWKTG PP G EA R VQLAVYR+AW+ RG P V AF Y TG TV P +L Sbjct: 1055 VVDWKTGRPPEG-EAARARDVQLAVYRLAWSRWRGVPLEDVSAAFFYASTGETVRPVDLL 1113 Query: 1084 DGMALAELLADSDPP 1098 G E L S PP Sbjct: 1114 -GAEDLERLVRSVPP 1127 >tr|D1ACM7|D1ACM7_THECU Tax_Id=471852 SubName: Full=UvrD/REP helicase;[Thermomonospora curvata DSM 43183] Length = 1128 Score = 636 bits (1641), Expect = e-180 Identities = 452/1167 (38%), Positives = 563/1167 (48%), Gaps = 118/1167 (10%) Query: 6 SPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 +P E+A L + PT EQA VI+AP P+ VIAGAG+GK+ETMAARVVWLVANG P + Sbjct: 3 TPVELARLLELPEPTPEQARVISAPLAPMAVIAGAGSGKSETMAARVVWLVANGLVRPER 62 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------STYHAFAGSLL 119 VLGLTFTRKAAG+ STYH++A L Sbjct: 63 VLGLTFTRKAAGELATRIRRRLDQLRDRLPQDELDRLGGEAALDGEPAVSTYHSYAARLF 122 Query: 120 RDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELC-TQKTPAAVTATVLRLWGQLAEH 178 DH L +EP RL+S WQLA VV+ Y G + P V VL L G+LAEH Sbjct: 123 GDHALRAALEPTMRLISPAMAWQLAARVVDDYDGAMDGIDWRPDTVVRAVLDLSGELAEH 182 Query: 179 LVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERM 238 L +R+ L ALP +R + N +LATQ R L+PL++A Sbjct: 183 LRTPEDVREIGRRLRAQFDALPG---RRGAAKN-----VLATQEIRERLLPLVEAYQRAK 234 Query: 239 RAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGV 298 +V+D+G Q+ P VG RSRY VVLLDEYQDT H+Q V L++LFGGG Sbjct: 235 IEREVLDYGDQVALAARIARDHPDVGMIERSRYAVVLLDEYQDTSHAQLVLLTSLFGGGH 294 Query: 299 DDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAP------------------- 339 +TAVGDP QSIYGWRGA + NL F DF L+ P Sbjct: 295 P----VTAVGDPCQSIYGWRGAGSGNLTGFPEDFPLAPAVPSRVAAVPPPRPGRRPPRHA 350 Query: 340 --APVLELRTSWRNPPRALHLANAISAEARRRSVAVHALRSRPDAPA-GTVRCALLADVQ 396 AP L SWRN R L +A I R + V LR G V CALL V Sbjct: 351 RPAPTATLSISWRNGERILEVAARIQQGLRADTANVPRLRPGEGRRGRGRVECALLPTVT 410 Query: 397 AERDWIADQLQGHYQRAAADGVSPPTA------------AVLVRRNXXXXXXXXXXXXRG 444 AE + IA++++ RAA ++P AVLVRR R Sbjct: 411 AEAEHIAERIRR--LRAADPELAPDGLPWDEGPLKYSHIAVLVRRRSQIPPLRKALEERD 468 Query: 445 IPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXX 504 IPVEVVGL GLL++PEV D+VA LR+V DPTAGA+ R+LTGPRWR+G D Sbjct: 469 IPVEVVGLGGLLTVPEVQDVVATLRVVHDPTAGASLARLLTGPRWRIGPRDLVALGRRAR 528 Query: 505 XXXGG-----------------PQXXXXXXXXXXXXXXXXXXXXXCLADAICDPGPADWY 547 P L DA+ D G Y Sbjct: 529 RLASENTRDITPPPDASELRPEPAANAEETDPLRQVVIELTQETGSLVDALDDLGDPSAY 588 Query: 548 SSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXXEHLD 607 S G R+ LAAEL LR +G LPDLVAEV R LGLD +V + LD Sbjct: 589 SPEGLARLRRLAAELRTLRSQVGLPLPDLVAEVERTLGLDIEVAARSGLDPAGARAD-LD 647 Query: 608 AFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLT 667 AF + A +AE S ++ LAYL A E GLP +++ + D V++LT Sbjct: 648 AFIETAASFAEE---------SENPTLGAFLAYLKAAESEEFGLPAGRVSES-DSVKLLT 697 Query: 668 VHAAKGLEWQVVAVAHL-----------SAGVFPSTASRSS-WLTDPGELPPLLRGDRAS 715 VHAAKGLEW VV V L +FPS +S+ W +P LP LRGD Sbjct: 698 VHAAKGLEWPVVVVPGLCYLPSGSGRPVKGSIFPSPPQQSTRWTDNPRLLPFELRGDYEK 757 Query: 716 VGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHH 775 +P L+ + + D + R + EERRL YV VTRA ++ +GH Sbjct: 758 GN---LPRLNGLTKADLDRFKDECA-------DRDLREERRLAYVAVTRASHLLIATGHR 807 Query: 776 WGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWP 835 WGAT +P PS FL E++ E A G V W P G NPL + WP Sbjct: 808 WGATA-RPLHPSPFLEEIRQACETGA------GRVVSWADPPEEGAANPLQAEAEPGRWP 860 Query: 836 TDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXX---IEGWTADVDALLAERARA 892 P R + GA +V +A+ + W DV+ LLAER R Sbjct: 861 ATPEGRRYAAIVEGAEMVRDAMVGRIAPWAGDDGLTEADRRRMTAWARDVELLLAERDRG 920 Query: 893 VGPPTRA--LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYG 950 G LP +L+VS LV L+RDP + + +P P P+A+ G AFH W++ +G Sbjct: 921 RGGDVLQVELPAKLTVSTLVALSRDPQEVARSIRRPMPRPPAPYARRGTAFHRWLESRWG 980 Query: 951 AELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGR 1010 + L D +LPGAAD L LQ F S WA+R P+ +EV FE +GD V+RGR Sbjct: 981 QQRLLDPDELPGAADEGAADDSMLTELQRRFEESEWASRRPLDIEVTFETVLGDRVLRGR 1040 Query: 1011 IDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHY 1070 +DAVF PDGG VVDWKTG PP E R AAVQLA YR+AWA L G P V AFHY Sbjct: 1041 MDAVFTAPDGGYEVVDWKTGRPP-ADEDFRHAAVQLAAYRLAWADLAGVPLEKVSAAFHY 1099 Query: 1071 VRTGVTVIPDELPDGMALAELLADSDP 1097 VR T+ P +L D L LL + P Sbjct: 1100 VRYNRTIRPADLLDRAGLTALLENIRP 1126 >tr|C5VEC6|C5VEC6_9CORY Tax_Id=553207 SubName: Full=ATP-dependent DNA helicase;[Corynebacterium matruchotii ATCC 14266] Length = 1095 Score = 636 bits (1640), Expect = e-180 Identities = 428/1117 (38%), Positives = 585/1117 (52%), Gaps = 65/1117 (5%) Query: 7 PDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 P E++ LG +PPT++QA VI A GP++V+AGAGAGKTETMAARVVWLVANG P Q Sbjct: 5 PIELSRLLGQKYPPTEQQATVIQADLGPMLVVAGAGAGKTETMAARVVWLVANGLINPDQ 64 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGS 117 VLGLTFTRKAA Q STY AFAG Sbjct: 65 VLGLTFTRKAAQQLGKRINDRLGQLAGIPDIAALDPSGRLANRLRSAGPTTSTYDAFAGK 124 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 L+ + GLLLP+EP +R++S+TEL+++A +VVN Y GEL + T V T+L L +L Sbjct: 125 LVGEFGLLLPVEPSSRIISQTELYRIAVQVVNEYEGELSMRHTTGHVVDTLLTLTAELDN 184 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 H+VD R+L+ + +L LP QR PNQ +L TQ R EL+PL+ L +R Sbjct: 185 HMVDERELKIESLLFAQLCEELPPAKRQRKK-PNQKILGWQETQFHRIELLPLVTKLKDR 243 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 ++ ++ FG QM P VG+ LR+RY+VV+LDEYQDT H+QR+ L +LF GG Sbjct: 244 LKDENLVTFGEQMSLAARLAVENPSVGKVLRNRYKVVMLDEYQDTSHAQRMLLRSLFAGG 303 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 A+TAVGDP+QSIYGWRGA+A NL RF TDFA+ PA EL S+RNPP LH Sbjct: 304 -----AVTAVGDPMQSIYGWRGATAANLNRFVTDFAIDPQEPAVKNELTISFRNPPEVLH 358 Query: 358 LANAISAEA----RRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRA 413 LANA++ + V L S P A AG ++ + ER+++AD L Y Sbjct: 359 LANAVATTVLGAPSDPNRPVQPLSSPPSAVAGDIQLGYFPTIADEREFVADTLAELYNN- 417 Query: 414 AADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGD 473 D P TAAVLVR+N RGIP E+VG+ GLL +PEVAD+VA+ ++ Sbjct: 418 -RDTAKPFTAAVLVRQNAHTGPIAKEFQRRGIPYEIVGINGLLDVPEVADMVAVATMLIR 476 Query: 474 PTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------GPQXXXXXXXXXXXXX 524 PT AAA+R+L GP LG D G Sbjct: 477 PTDSAAALRILGGPAVGLGVRDIQALARRAGELSGRATSGKATDSVDPAVKLGEEIAEVL 536 Query: 525 XXXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHL--GHWLPDLVAEVRR 582 L DAI D G + YS GY R+G L+++L LR + G LPDL AE+ R Sbjct: 537 AADAENIVGLTDAIADLGEPEKYSEEGYRRLGRLSSQLRRLRQTVAAGSSLPDLFAEIER 596 Query: 583 VLGLDCDVRXXXXXXXXXXXXE-HLDAFADVVADYAERAAISAGSALSTKASVDGLLAYL 641 V+G+ +V HLD VA++ A ++ LL Y Sbjct: 597 VMGIRTEVLSRENPRLDGAVGTIHLDKLHQEVANF----------ATIPNTTLSQLLDYF 646 Query: 642 DVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTD 701 A E+GL ++ V DRVQ+LTVH AKGLEW V V H + + T + S+WLT+ Sbjct: 647 TEARCQESGLELGEVQVRNDRVQILTVHKAKGLEWNTVCVLHANNRDYDKTRA-STWLTN 705 Query: 702 PGELPPLLRGDRASVG-ALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYV 760 P +P LRGD A G +G PVLDTS + NR QL +AH E+ Q +E RL YV Sbjct: 706 PAMVPSTLRGDAAESGDTVGSPVLDTSWLENRAQLEAECAAHIEEFRQSLSEESTRLFYV 765 Query: 761 GVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQW-DPAPVA 819 VTRA ++V+ S+FL +I+R+A+ ++ W DPA A Sbjct: 766 AVTRAAQRLIVTASALDDNERDTEPCSNFL-----LIKRNAST----DSIVAWHDPAEAA 816 Query: 820 G-ERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGW 878 + + +V ++ P T+ D+ GA LV +AI+ + W Sbjct: 817 ATDTSDEPSEVQQSPTGMFPKPTKTVDLLTGADLVRKAIAQQSVGDPIAFNQDNDLFQLW 876 Query: 879 TADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQL 937 DV AL+ E R L +L+ + +V L ++P +R +P +P+ +A+ Sbjct: 877 EKDVTALIEEYQRLQSDIVEVELSPELTATDIVALKQNPEQFARRQRRPVPFKPNRYAKR 936 Query: 938 GNAFHTWVQQFYGAELLFDLGDLPGAADSDV--GQVEDLAPLQEAFAGSPWAARTPIAVE 995 G FH+W++Q +GA L D +LPG D ++ GQ+++ L++ F +A RTP+ VE Sbjct: 937 GTEFHSWLEQRFGAPTLLDESELPG-MDEEITPGQLQE---LKDKFVAGQFADRTPMFVE 992 Query: 996 VPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAA 1055 PFE+ + V+RGR+DAVF D + G +VDWKTG+ P + MR +QLAVYR+AWA Sbjct: 993 QPFEVSIDGIVIRGRMDAVFRD-ESGWHIVDWKTGQLPSRAD-MRYLMMQLAVYRIAWAQ 1050 Query: 1056 LRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 L+G + +F+YVR D LP +AE L Sbjct: 1051 LQGIDPDEIHASFYYVRYDKLSSADNLPSEREIAETL 1087 >tr|Q6NIP5|Q6NIP5_CORDI Tax_Id=1717 SubName: Full=Putative helicase;[Corynebacterium diphtheriae] Length = 1076 Score = 634 bits (1635), Expect = e-179 Identities = 427/1120 (38%), Positives = 578/1120 (51%), Gaps = 89/1120 (7%) Query: 6 SPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPG 64 SP E++ ALG FPPT +QA VI++P P +V+AGAGAGKTETMAARVVWLVA+G +P Sbjct: 3 SPQELSCALGQKFPPTPQQADVISSPLAPTLVVAGAGAGKTETMAARVVWLVASGLVDPD 62 Query: 65 QVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAG 116 +VLGLTFTRKAA Q STY ++AG Sbjct: 63 RVLGLTFTRKAAQQLSKRIRDRLEQLAGIDNLRDLDPTGALATKLEAIAPTVSTYDSYAG 122 Query: 117 SLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLA 176 L+ ++GLLLP+EP +RL+S+TEL+Q+A +V+ + G L T +P VT+T++ L ++ Sbjct: 123 RLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTGALNTSNSPNTVTSTLISLVSEMD 182 Query: 177 EHLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHE 236 H+V + + ++ + A + P++ + + TQ R EL+PL+ L Sbjct: 183 NHMVSPTDIEEESAAFLAMIEDVEATSKR---APSKEVYKWRDTQVLRNELLPLVQQLKT 239 Query: 237 RMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGG 296 + +M FG QM PQVG R+RY++++LDEYQDTGH+QRV L +LF G Sbjct: 240 HLADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIMLDEYQDTGHAQRVLLKSLFAG 299 Query: 297 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 A+TAVGDP+QSIYGWRGA+A NL RF TDF S+G+PA EL S+RNPP L Sbjct: 300 -----TAVTAVGDPMQSIYGWRGATAANLERFLTDFG-SNGSPATKKELTVSFRNPPEVL 353 Query: 357 HLANAISAEAR------RRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHY 410 LAN +S E RR V L P A G VR + ER ++AD L Y Sbjct: 354 DLANRVSRELLGVPEDPRRPV--QPLEPGPAALNGIVRLGFFPSMDEERSYVADHLAQAY 411 Query: 411 QRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRL 470 ++ DG P TAAVLVR+ RG+PVE+VGLAGLL IPEVADLVA+ L Sbjct: 412 EQH--DGDHPFTAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIPEVADLVAIATL 469 Query: 471 VGDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXX 530 + P AAMR+L GP LG +D G + Sbjct: 470 LVRPYDTQAAMRILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELSRDPLERLKQIIA 529 Query: 531 XXC---------LADAICD--------PGPADWYSSAGYERIGALAAELNALRGH-LGHW 572 LA+A+ D GP YS+ G ER+ LAA L LR + L + Sbjct: 530 DTTPSDQDSIVGLAEAVADLDERLDSSDGPR--YSAKGSERLRTLAARLRYLRTNSLSNS 587 Query: 573 LPDLVAEVRRVLGLDCDV-RXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTK 631 LPDL A++ RV G+ +V + HLD FA+VV D++ Sbjct: 588 LPDLFADIERVFGIRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRIPG---------- 637 Query: 632 ASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPS 691 A++ LL YL +A ENGL P ++ V DRVQ+LTVH AKGLEWQ VAV H A + Sbjct: 638 ANLSLLLDYLSLAESEENGLEPGEVQVTADRVQILTVHKAKGLEWQHVAVLHADANTY-- 695 Query: 692 TASRSSWLTDPGELPPLLRGD-RASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRR 750 A S+WLT+ +P LRGD + +G PV + +L+ AH Q Sbjct: 696 VAKASTWLTNASAVPSALRGDAKGDEDLVGAPVFEIDTPDTAAELAKAGKAHIADFKQVA 755 Query: 751 VDEERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTV 810 +E RL YV +TRAE VLV+ + +P P ++L L++ D +V Sbjct: 756 AEENARLFYVAITRAEQQVLVTASA-DPSKKRPVLPYEYLTMLRN---------DFPDSV 805 Query: 811 DQWDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXX 870 ++W A + P EAV+P + + DV + + IS Sbjct: 806 EEWHERGEAEDYVPPAPQ--EAVFPPNYIVVGAEDVFAAMQKQPDLISDDDL-------- 855 Query: 871 XXXXIEGWTADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPT 929 E W +V AL+ E + P + +L+ + +V LA++P QR +P Sbjct: 856 ----FERWEKEVSALIEEHEQLSAPVVAVNIGVELTATDIVNLAKNPENFAQRRRRPVPF 911 Query: 930 RPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAAR 989 +P+ +A+ G AFH W++ +GAE L D +LPG + DL L+EAF S WA R Sbjct: 912 KPNSYAKRGTAFHEWLENRFGAEALLDETELPGIGEEL--DDSDLDRLKEAFLDSEWADR 969 Query: 990 TPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVY 1049 TP VE PFE+ +G +VRGR+DAVF++ DG VVDWKTG+PP A+QLAVY Sbjct: 970 TPEHVEHPFEVSIGRHIVRGRMDAVFKNSDGRWIVVDWKTGQPPTDNHEKESVAMQLAVY 1029 Query: 1050 RMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALA 1089 R+AWA L+G V FHYV VT P +LPDG LA Sbjct: 1030 RLAWARLQGIDVDRVDAVFHYVGRNVTYRPQQLPDGEELA 1069 >tr|C0E159|C0E159_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 1095 Score = 634 bits (1635), Expect = e-179 Identities = 427/1117 (38%), Positives = 585/1117 (52%), Gaps = 65/1117 (5%) Query: 7 PDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQ 65 P E++ LG +PPT++QA VI A GP++V+AGAGAGKTETMAARVVWLVANG +P Q Sbjct: 5 PIELSRLLGQKYPPTEQQATVIQADLGPMLVVAGAGAGKTETMAARVVWLVANGLIDPDQ 64 Query: 66 VLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGS 117 VLGLTFTRKAA Q STY AFAG Sbjct: 65 VLGLTFTRKAAQQLGKRINDRLGQLAGIPDIAALDPSGRLANRLRSAGPTTSTYDAFAGK 124 Query: 118 LLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAE 177 L+ + GLLLP+EP +R++S+TEL+++A +VVN Y GEL + T V T+L L +L Sbjct: 125 LVGEFGLLLPVEPSSRIISQTELYRIAVQVVNEYEGELSMRHTTGHVVDTLLTLTAELDN 184 Query: 178 HLVDTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHER 237 H+VD R+L+ + +L LP QR PNQ +L TQ R EL+PL+ L +R Sbjct: 185 HMVDERELKIESLLFAQLCEELPPAKRQRKK-PNQKILGWQETQFHRIELLPLVTKLKDR 243 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 ++ ++ FG QM P VG+ LR+RY+VV+LDEYQDT H+QR+ L +LF GG Sbjct: 244 LKDENLVTFGEQMSLAARLAVENPSVGKVLRNRYKVVMLDEYQDTSHAQRMLLRSLFAGG 303 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 A+TAVGDP+QSIYGWRGA+A NL RF TDFA+ PA EL S+RNPP LH Sbjct: 304 -----AVTAVGDPMQSIYGWRGATAANLNRFVTDFAIDPQEPAVKNELTISFRNPPEVLH 358 Query: 358 LANAISAEA----RRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRA 413 LANA++ + V L S P A AG ++ + ER ++AD L Y Sbjct: 359 LANAVATTVLGAPSDPNRPVQPLSSPPSAVAGDIQLGYFPTIADERQFVADTLAELYNN- 417 Query: 414 AADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGD 473 D P TAAVLVR+N RGIP E+VG+ GLL +PEVAD+VA+ ++ Sbjct: 418 -RDTAKPFTAAVLVRQNAHTGPIAKEFQRRGIPYEIVGINGLLDVPEVADMVAVAIMLIR 476 Query: 474 PTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXC 533 PT AAA+R+L GP LG D G Sbjct: 477 PTDSAAALRILGGPAVGLGVRDIQALARRAGELSGRASSGKTTDSVDPAVKLEEEIAEVL 536 Query: 534 ---------LADAICDPGPADWYSSAGYERIGALAAELNALRGHL--GHWLPDLVAEVRR 582 L DAI D G + YS GY R+G L+++L LR + G LPDL AE+ R Sbjct: 537 AADAENIVGLTDAIADLGEPEKYSEEGYRRLGRLSSQLRRLRQTVAAGSSLPDLFAEIER 596 Query: 583 VLGLDCDVRXXXXXXXXXXXXE-HLDAFADVVADYAERAAISAGSALSTKASVDGLLAYL 641 V+G+ +V HLD VA++ A ++ LL Y Sbjct: 597 VMGIRTEVLSRENPRLDGAVGTIHLDKLHQEVANF----------ATIPNTTLSQLLDYF 646 Query: 642 DVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTD 701 A E+GL ++ V DRVQ+LTVH AKGLEW V V H + + T + S+WLT+ Sbjct: 647 TEARRQESGLELGEVQVRSDRVQILTVHKAKGLEWNTVCVLHANNRDYDKTRA-STWLTN 705 Query: 702 PGELPPLLRGDRASVG-ALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYV 760 P +P LRGD A G +G PVLDTS + NR QL +AH E+ Q +E RL YV Sbjct: 706 PAMVPSTLRGDAAESGDTVGSPVLDTSWLENRAQLEAECAAHIEEFRQSLSEESTRLFYV 765 Query: 761 GVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQW-DPA-PV 818 VTRA ++V+ S+FL +++R+A+ ++ W DPA Sbjct: 766 AVTRAAQRLIVTASALDDNERDIEPCSNFL-----LMKRNAST----DSIVAWHDPAEAA 816 Query: 819 AGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGW 878 A + + +V ++ P T+ D+ GA LV +AI+ + W Sbjct: 817 AADTSDGPSEVQQSPIGMFPKPTKTVDLLTGADLVRKAIAQQSAGDPIAFNQDNDLFQLW 876 Query: 879 TADVDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQL 937 DV AL+ E R L +L+ + +V L ++P +R +P +P+ +A+ Sbjct: 877 EKDVTALIEEYQRLQSDIVEVELSPELTATDIVALKQNPEQFARRQRRPVPFKPNRYAKR 936 Query: 938 GNAFHTWVQQFYGAELLFDLGDLPGAADSDV--GQVEDLAPLQEAFAGSPWAARTPIAVE 995 G FH+W++Q +GA L D +LPG D ++ GQ+++ L++ F +A RTP+ VE Sbjct: 937 GTEFHSWLEQRFGAPTLLDESELPG-MDEEITPGQLQE---LKDKFVAGQFADRTPMFVE 992 Query: 996 VPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAA 1055 PFE+ + V+RGR+DAVF D + G +VDWKTG+ P + MR +QLAVYR+AWA Sbjct: 993 QPFEVSIDGIVIRGRMDAVFRD-ESGWHIVDWKTGQLPSRAD-MRYLMMQLAVYRIAWAQ 1050 Query: 1056 LRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELL 1092 L+G + +F+YVR D LP +AE L Sbjct: 1051 LQGIDPDEIHASFYYVRYDKLSSADNLPSEREIAETL 1087 >tr|D1BXK8|D1BXK8_9MICO Tax_Id=446471 SubName: Full=UvrD/REP helicase;[Xylanimonas cellulosilytica DSM 15894] Length = 1192 Score = 630 bits (1624), Expect = e-178 Identities = 458/1159 (39%), Positives = 562/1159 (48%), Gaps = 112/1159 (9%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P S EIA +G PTDEQ AVI AP P +V+AGAG+GKTETMAARVVWL+ANG E Sbjct: 59 PVLSAREIARLIGRHEPTDEQVAVIEAPLEPTLVVAGAGSGKTETMAARVVWLIANGLVE 118 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------STYHA 113 P QVLGLTFTRKAAG+ +TY+A Sbjct: 119 PEQVLGLTFTRKAAGELQTRVTSRLAQLARARTRAGHGPASAADAAIDLLARPTIATYNA 178 Query: 114 FAGSLLRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWG 173 +A SL+ DHGL L +EP +RLL E WQLA ++V + +L T ++ + V V+ L G Sbjct: 179 YAASLVTDHGLRLGVEPGSRLLGEANQWQLANQLVESWDEDLGTDRSVSGVVGGVIGLSG 238 Query: 174 QLAEHLVDTRQLRDTHIELERLVHALPAGPNQRDSGP-NQWLLRMLATQTERAELVPLLD 232 +L EHLVD R + + ALP GP QR G N+ LLR LA ER L+ L+ Sbjct: 239 ELGEHLVDVDDARAMLDAMIERLSALPLGPRQRTRGADNEKLLRSLA---ERRGLLDLVA 295 Query: 233 ALHERMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSA 292 R RAA +DFG Q+ + P VGE R+R+RVVLLDEYQDT ++Q L+ Sbjct: 296 EYRRRKRAADALDFGDQIAFAAELARSVPYVGEVERARFRVVLLDEYQDTSYAQVELLAG 355 Query: 293 LFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNP 352 LFGGG A+TAVGDP QSIYGWRGASA+ L RF F +DGAPA V L TSWRN Sbjct: 356 LFGGGH----AVTAVGDPHQSIYGWRGASASGLARFPERFRHADGAPAGVRYLSTSWRND 411 Query: 353 PRALHLANAISAEARRR-SVAVHALRSRPDAPAGTVRC----ALLADVQAERDWIADQLQ 407 L AN SA R + V L RP A AG V L + +A +W+A++ Sbjct: 412 AAVLAAANIASAPLRAELTTHVPPLDLRPGAGAGVVSAHVATTLEEEAEAAAEWVAERW- 470 Query: 408 GHYQRAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAM 467 R TAAVL R+ RG+PVEVVGL GLLS PEV D+VA+ Sbjct: 471 ----RPGTHPHGRVTAAVLCRKRSQFAAVEVALRRRGLPVEVVGLGGLLSTPEVVDVVAL 526 Query: 468 LRLVGDPTAGAAAMRVLTGPRWRLGGS----------------DXXXXXXXXXXXXGGPQ 511 L V DP+ G + +R+LTGPR LG + D P Sbjct: 527 LEAVHDPSRGDSLLRLLTGPRVNLGAADLHALGSRAADLAREDDPRRAAGRAHSDGDAPA 586 Query: 512 XXXXXXXXXXXXXXXXXXXXX--CLADAICD---PGPADW----YSSAGYERIGALAAEL 562 L DA+ D PG A + AG+ R+ AL + L Sbjct: 587 APDGGSGEADDLAVVEGDVVDHRSLVDALDDLPQPGRAARDGRVLTPAGHTRLAALRSVL 646 Query: 563 NALRGHLGHWLPDLVAEVRRVLGLDCDVRXXXXXXXXXXXX---------EHLDAFADVV 613 +LRG LP+LV + R LGLD +V EHLDAF DV Sbjct: 647 RSLRGLTYLSLPELVVQAERALGLDVEVATADAVATLVPDAGERVSRRGREHLDAFRDVA 706 Query: 614 ADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVARDRVQVLTVHAAKG 673 A +A+ A A++ LA+L VA + E GL D VQV+T HAAKG Sbjct: 707 ATFAQSA---------DAATLGAFLAWLGVAQKQERGLDLPVREPDPDAVQVITAHAAKG 757 Query: 674 LEWQVVAVAHLSAGVFPSTA-------SRSSWLTDPGELPPLLRGDRASVGALGIPVLDT 726 LEW VVAV L GVFP+ A + S+WLTD LP LRGD A +P Sbjct: 758 LEWDVVAVPGLVDGVFPTIAEAANGQRAESAWLTDVAALPYPLRGDDAD-----LPAFRW 812 Query: 727 SAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGP 786 A + K+L R + + EERRL YV TRA +L++ H WG T PR Sbjct: 813 EAAVDTKELDGLRGEFRAACGEHALAEERRLAYVAFTRARRELLLTAHWWG-TSSTPRRL 871 Query: 787 SDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLATRRGDV 846 S FL EL ++ T D W AP A + NP D V A WP DV Sbjct: 872 SPFLVELVEV---------GLVTADGWTAAPDAADSNPRDDVEVTASWPAVD------DV 916 Query: 847 ERGA-RLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDA---------LLAERARAVGPP 896 E G+ R V A + +G D LLAER G Sbjct: 917 EVGSPRDVLRATAALVDAAATDRAAHAVAADGVLVDAAGHDIVELARILLAERDERSGHE 976 Query: 897 TRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFD 956 +P +S SGLV LA D +L +P P HA+ G FH WV+Q + + LFD Sbjct: 977 VE-MPAHVSASGLVRLATDRDEFALQLRRPVPAEPTVHARRGTRFHEWVEQQFASSALFD 1035 Query: 957 LGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFE 1016 + DLPGA D D+ DL L+E F S WA RTPIAVE E P+ + R R+DAVF Sbjct: 1036 VDDLPGADDGDLPGDADLDVLKEKFLVSEWADRTPIAVEQDVETPLAGIMTRSRMDAVFA 1095 Query: 1017 DPD---GGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRT 1073 DPD G VVDWKTG PP A VQLAVYR+AW+ G P V AF YV T Sbjct: 1096 DPDGEPGSVVVVDWKTGRPPTDTAARAAREVQLAVYRLAWSRWTGLPLDKVSAAFCYVAT 1155 Query: 1074 GVTVIPDELPDGMALAELL 1092 G TV P+ L L L+ Sbjct: 1156 GETVRPERLATEAELEALI 1174 >tr|C1RP66|C1RP66_9CELL Tax_Id=446466 SubName: Full=DNA/RNA helicase, superfamily I;[Cellulomonas flavigena DSM 20109] Length = 1162 Score = 619 bits (1597), Expect = e-175 Identities = 457/1174 (38%), Positives = 557/1174 (47%), Gaps = 127/1174 (10%) Query: 10 IASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEPGQVLGL 69 IA +G PPTDEQ AVI AP P +V+AGAG+GKTETMAARVVWLVANG P QVLGL Sbjct: 17 IAQLVGQHPPTDEQRAVIEAPLRPSLVVAGAGSGKTETMAARVVWLVANGLVAPDQVLGL 76 Query: 70 TFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STYHAFAGSLLRD 121 TFTRKAAG+ STYHA+A SL+ D Sbjct: 77 TFTRKAAGELSERVRRRLRGLVRAAAAEGVELPTDAAVVDELARPHVSTYHAYAASLVSD 136 Query: 122 HGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLVD 181 H L L +EP RLL E W LA +VV + G+L T + V VL L G L EHL+D Sbjct: 137 HALRLGVEPGARLLGEAAQWPLASQVVESWAGDLETAAATSTVVEAVLALSGALDEHLLD 196 Query: 182 TRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRAA 241 R L + A PAG R P + +++A+ ERA ++ L+ R R A Sbjct: 197 PSLARQGIESLVASLLATPAGTPPR--APYAEVRKLVASLGERARVLDLVADYRARKRTA 254 Query: 242 KVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDDG 301 +DFG Q+ P+VG R R+RVVLLDEYQDT ++Q V L ALF G Sbjct: 255 DSLDFGDQVALAARIARDVPEVGAAERERFRVVLLDEYQDTSYAQLVLLQALFTAGHP-- 312 Query: 302 LALTAVGDPIQSIYGWRGASATNLPRFSTDFAL----SDGA----PAPVLELRTSWRNPP 353 +TAVGDP QSIYGWRGAS L RF F + DG PA V+ L TSWRN Sbjct: 313 --VTAVGDPHQSIYGWRGASPGGLARFPGAFPVVEKGPDGRERRRPADVVPLSTSWRNDI 370 Query: 354 RALHLANAISAEARRRS--VAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQ 411 L ANA++A R V V L RP A G V+ + V+ E D +A + + Sbjct: 371 AILDAANAVAAPLRTGGARVDVPRLAPRPGAGDGLVQALVAQTVEDEADAVAAWV-ARWW 429 Query: 412 RAAADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLV 471 R A TAAVL R+ G+PVEVVGL GLL+ PEV DLVA+L+ Sbjct: 430 RPAHHPAGARTAAVLCRKRSQFEPLRRALRAAGLPVEVVGLGGLLATPEVVDLVAVLQAA 489 Query: 472 GDPTAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXX 531 DPT G A +R+LTG R RLG SD Sbjct: 490 HDPTRGDAVVRLLTGARTRLGASDLHALGEWARQGA-----RPTGRPGGAPGVEADVVDE 544 Query: 532 XCLADAICDPGPADWYSSAGY-------ERIGALAAELNALRGHLGHWLPDLVAEVRRVL 584 L DA+ P P W S +G R+ LAA L A+R H G LP+LV E R+ Sbjct: 545 RSLVDALDAPPPPGWRSPSGRTVTPEGRRRLLDLAAVLRAVRAHQGLSLPELVGEAERLF 604 Query: 585 GLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVA 644 GLD +V+ HLDA ADV A++A A + ++ LA+L+ A Sbjct: 605 GLDIEVQARADVTPGRARA-HLDALADVAAEFARGA---------DRPTLGAFLAWLEAA 654 Query: 645 AEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTA-------SRSS 697 E+GL D VQV TVHAAKGLEW V VA + G P+TA S+ Sbjct: 655 DAREDGLELPVTEPDPDAVQVTTVHAAKGLEWDAVVVAGMVDGGLPATAMLGKDGPKDSA 714 Query: 698 WLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRL 757 WLT G LP LRGD A +P L+ + + K+L++ + R V EERRL Sbjct: 715 WLTGLGVLPYPLRGD-----ADDLPRLECAGAESPKELAERLERFRLDAGDHEVAEERRL 769 Query: 758 LYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAP 817 YV +TRA + +L++ +WG PR S FL +L D A + G ++ DP Sbjct: 770 AYVALTRAREALLLTAAYWG-DAKAPRQASPFLTDLMD-----AGLAEVVGRAEEPDPKA 823 Query: 818 VAGERNPLLDDVVEAVWPTDPL-----ATRRGDVERGARLV------------------- 853 NP A WP DP A RR V A V Sbjct: 824 ----SNPRAALTPTAQWPADPFARDGAAPRRDAVTAAAVAVTAAMAELAASGTGPDEGEI 879 Query: 854 --------------------AEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAERA-RA 892 A A E W A D LLAE+A R Sbjct: 880 GTDPHDTGAGATGSASHDTGAGATGAAASDRPPTPGSPVGDREDWDALADRLLAEQAARR 939 Query: 893 VGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAE 952 G ALP LS S LV LA P L +P P P A+ G AFH WV+ +YG Sbjct: 940 RGDGRVALPAHLSASSLVRLAAQPEQFALHLRRPVPREPSPQARRGTAFHAWVEAWYGRA 999 Query: 953 LLFDLGDLPGAAD----SDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVR 1008 L D+ DLPGA D D GQVE L+ AF +PWA R P+AVEV E VG V+R Sbjct: 1000 ALVDVDDLPGADDDVLPDDPGQVE----LRAAFLRTPWAHRAPVAVEVDVETTVGGYVLR 1055 Query: 1009 GRIDAVFEDPD-----GGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESS 1063 RIDAVF DPD G VVDWKTG PPR P +QLAVYR+AWA L G Sbjct: 1056 SRIDAVFSDPDRPGVPGAVVVVDWKTGAPPRDPAERASRDLQLAVYRLAWARLSGTDPDL 1115 Query: 1064 VRTAFHYVRTGVTVIPDELPDGMALAELLADSDP 1097 VR AF YV +G TV+P+ LP +A LLA + P Sbjct: 1116 VRAAFCYVASGATVVPEHLPGEEEVARLLAAAAP 1149 >tr|C3PEP2|C3PEP2_CORA7 Tax_Id=548476 SubName: Full=Putative ATP-dependent DNA helicase II;[Corynebacterium aurimucosum] Length = 1070 Score = 597 bits (1540), Expect = e-168 Identities = 424/1120 (37%), Positives = 576/1120 (51%), Gaps = 89/1120 (7%) Query: 5 YSPDEIASALGI-FPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAEP 63 +SP+++A+ALG FPPT EQAAVI P GP +V+AGAGAGKTETMA+RVV LVANG P Sbjct: 9 FSPEQLATALGKPFPPTQEQAAVIDGPLGPKLVVAGAGAGKTETMASRVVSLVANGLVRP 68 Query: 64 GQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----STYHAFAGSL 118 QVLGLTFTRKAA Q STY ++AG L Sbjct: 69 EQVLGLTFTRKAAQQLEQRIRRQLLTLRSSGILAPGSPAAEAVENIAPNVSTYDSYAGDL 128 Query: 119 LRDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEH 178 +R++GLL+P+EP+ R+++E E + +A EVV+ Y G L T A VTAT+L+L + Sbjct: 129 VREYGLLMPVEPNARIITEAERYAIAHEVVSNYTGSLSTDSAVATVTATLLKLAETMDGE 188 Query: 179 LVDTRQLRDTHIELERLVHALPAGPNQRDSGP-NQWLLRMLATQTERAELVPLLDALHER 237 L D + L + H ++ R A ++R G + L + L TQ R E +PL++AL + Sbjct: 189 LKDPQDLYE-HEDIFRKT-AEDLEKSKRTKGEFGKDLQKYLDTQRLRLEYLPLVEALKKE 246 Query: 238 MRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGG 297 V+ FG QM P +GE+ +RYRV++LDEYQDT H+QR+ L +LFGG Sbjct: 247 QSERGVITFGEQMSIAATLAKNFPLLGEQQSARYRVIMLDEYQDTSHAQRILLRSLFGGE 306 Query: 298 VDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 +GL++TAVGDP+QSIYGWRGA+A NL F TDF DG PAP +L TSWRNP L Sbjct: 307 -REGLSVTAVGDPMQSIYGWRGATAENLEAFVTDFPQPDGTPAPKDQLTTSWRNPSTVLS 365 Query: 358 LANAISAEARRRSVA---VHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAA 414 LAN ++++ S V L +P APAG V A ER +IA+ L+ Y+ + Sbjct: 366 LANDVASKLFSLSPGERPVDELSPKPTAPAGKVELGYFASEDEERAFIAEHLRRLYE-ST 424 Query: 415 ADGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDP 474 +G +AAVLVR N G+P E+ GL GLL PE+ DLVA+ L+ P Sbjct: 425 PEG-EDFSAAVLVRTNRQSPLIAAALDEVGVPNEIFGLGGLLWQPEIQDLVAVATLLVRP 483 Query: 475 TAGAAAMRVLTGPRWRLGGSDXXXXXXXXXXXXG---------GPQXXXXXXXXXXXXXX 525 AAA+RVLTGP LG +D G G Sbjct: 484 QDTAAALRVLTGPMCGLGIADIQALHSRQRNLAGATEGRTRWNGGDPLDHLATQVEEITA 543 Query: 526 XXXXXXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGH-LGHWLPDLVAEVRRVL 584 LADA+ D G D YS+ G ER+ ++++L LR + LG L D+VA++ + Sbjct: 544 EGPDQVLGLADALADLGERDRYSAEGLERMEEVSSKLRYLRTYSLGKTLNDIVADIELLF 603 Query: 585 GLDCDVRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVA 644 GL +V HLDAFAD VA + G L+ GLL YL++A Sbjct: 604 GLRTEV----LASGKPGRATHLDAFADFVAGF-------HGDGLA------GLLDYLELA 646 Query: 645 AEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGE 704 E E+GL ++ + R+RVQ++TVH AKGLEW+ V V H + + + A ++LT + Sbjct: 647 KEKEDGLELGEVPLVRNRVQIMTVHKAKGLEWEHVCVVHADSSSYKAQA--ETFLTKIEK 704 Query: 705 LPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTR 764 P GD + +P AVT R +A +EQ + + +E RL YV +TR Sbjct: 705 AP----GDE---DVIDVP---EDAVT-RSDFDKACTAFKEQNREFQAEEAARLFYVAMTR 753 Query: 765 AEDTVLVSGHHWG-ATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWD--PAPVAGE 821 E T+ V+G G +GP +L L D V WD PV E Sbjct: 754 TESTLTVTGSGTNRLKGKSKKGPYSYLQLLADKHPE---------LVGHWDIPETPVEEE 804 Query: 822 RNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTAD 881 L ++ P P A + R A + W + Sbjct: 805 EGSALQASFPSLSP-QPEALNAAEAVRAAMEDLPPLRDGEVFGL------------WEQE 851 Query: 882 VDALLAERARAVGPPTRA-LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNA 940 AL+ E P LP +L+ S +V ++ DP +R +P +P+ +A+ G A Sbjct: 852 ASALIEEHKALQAPVVDVELPGELTASDMVAMSADPTQFARRQRRPIPFKPNSYAKRGTA 911 Query: 941 FHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEM 1000 FH W++ +GA L +LPG+ D DL L+E+F S WA RTP VE PFE+ Sbjct: 912 FHAWLEDRFGAPALLGEDELPGSHDE---PDHDLESLKESFLASEWAQRTPAFVEAPFEI 968 Query: 1001 PVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCP 1060 +GD+VVRGR+DAVF+ PDG +VDWKTG P+G A+ A +QLAVY AW + G Sbjct: 969 TIGDSVVRGRMDAVFQQPDGSWLIVDWKTGRRPQG-AALASAQIQLAVYAEAWRRIHGV- 1026 Query: 1061 ESSVRTAFHYVRTGVTVIPDELPDGMALAELL--ADSDPP 1098 +VR AF+YV + PD+LP G LAELL A S PP Sbjct: 1027 -DTVRAAFYYVYENYLLEPDDLPAGARLAELLSSAVSTPP 1065 >tr|Q2J6E3|Q2J6E3_FRASC Tax_Id=106370 SubName: Full=UvrD/REP helicase;[Frankia sp.] Length = 1130 Score = 588 bits (1516), Expect = e-165 Identities = 431/1120 (38%), Positives = 543/1120 (48%), Gaps = 80/1120 (7%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 PR PD++ L + P TDEQ A AP P V+IAGAG+GKT MAARVVWLVA G Sbjct: 40 PRLDPDDLRDLLEV-PYTDEQIAAATAPLEPGVIIAGAGSGKTSVMAARVVWLVATGQVR 98 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---STYHAFAGSLL 119 P QVLGLTFT KAA + +TYHAFAG L+ Sbjct: 99 PDQVLGLTFTTKAAAELSGRVRLALRKASAGAGPGGPAADGEVDGEPTVATYHAFAGRLV 158 Query: 120 RDHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGEL-CTQKTPAAVTATVLRLWGQLAEH 178 D+ L L +EPD +L+S +QLA V + G++ ++ A+ ++ L +++EH Sbjct: 159 VDNALRLGLEPDLQLISGAARYQLAARVARSHGGKVEALTRSLGALVGELVALDAEMSEH 218 Query: 179 LVDTRQLRDTHIELERLVHALPAGPNQRDS--GPNQWLLRMLATQTERAELVPLLDALHE 236 LVD L L + A QR G + L R A R EL L+ Sbjct: 219 LVDPADLVAFDGALLAEIDAALRRAEQRRGTRGVRRELRRCAAAARGRRELAALVAEYRA 278 Query: 237 RMRAAKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGG 296 R V+DFG Q+ T P+VG R+R VVLLDEYQDT +QR L+ LFGG Sbjct: 279 ARRERDVLDFGDQVTCAARLAETMPEVGRAERARAAVVLLDEYQDTSVAQRRMLTGLFGG 338 Query: 297 GVDDGLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRAL 356 G +TAVGDP Q+IYGWRGAS NL F T F +DG PA V EL + R+ R L Sbjct: 339 GHP----VTAVGDPCQAIYGWRGASVANLDHFPTHFPGADGTPAAVYELSVNQRSGGRLL 394 Query: 357 HLANAISAEARRRSVAVHALRSRPD-APAGTVRCALLADVQAERDWIADQLQGHYQRAAA 415 LAN ++A+ R R V LR RPD A G AL E WIA QL +R Sbjct: 395 RLANTVAAQLRARHRVVE-LRPRPDVADQGEAVVALHVSWADEVAWIAGQL----RRVVD 449 Query: 416 DGVSPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPT 475 G +P AVLVR G+PVEVVGL GLL +PEVA++VAML ++ PT Sbjct: 450 AGTAPGDIAVLVRARGDIPALFTAMQAAGLPVEVVGLTGLLIVPEVAEIVAMLEVLDSPT 509 Query: 476 AGAAAMRVLTGPRWRLGGSD------XXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXX 529 A AA +R+LTGPR RLG D G P Sbjct: 510 ANAALVRLLTGPRVRLGPRDLAALGRHAREAARVPDPVGDPDLPGRSDPLAEAVADVDPA 569 Query: 530 XXXCLADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCD 589 L+D + DPGP S+ G R+ LAAE+ ALRGH+G L DL+ V +GLD + Sbjct: 570 DVVALSDVLDDPGPQ--MSAPGRARVRRLAAEIAALRGHVGEGLLDLLHRVVATIGLDVE 627 Query: 590 VRXXXXXXXXXXXXEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVEN 649 + E++ AF DV A + + + S+ L +L A E E Sbjct: 628 L-TATEVAVRARRQENVAAFLDVAAGFTDPDGTN---------SLPAFLGFLRAAREHER 677 Query: 650 GLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLL 709 GL A + A D + ++T+H +KGLEW+VVAV +L++ VFP R W T PG LP L Sbjct: 678 GLDVAGPSGA-DAIALMTMHRSKGLEWEVVAVPNLTSKVFPDLTVRDQWTTSPGVLPIPL 736 Query: 710 RGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTV 769 RGD + A V K D A Q +R EERRL YV VTRA+ + Sbjct: 737 RGDADDLPAF--------TVCAEKAALDAFRADARQYAER---EERRLAYVAVTRAKSLL 785 Query: 770 LVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDV 829 SGH WG T PRG S FL EL E + G G VD W P P A NP L Sbjct: 786 FASGHWWGPTQKTPRGASVFLDEL---AEHARTGG---GLVDVWAPEP-AERTNPALATP 838 Query: 830 VEAVWP----TDPLATRRGDVERGARLVAEAISXXXXXXXXXXXXXXXXIEGWTADVDAL 885 WP +P A R E G A+S G TA L Sbjct: 839 ERFAWPIPYEPEPYARRLAAAE-GVMARLAALSVPGASAEPAGEPFVDGPAGMTAAERVL 897 Query: 886 LA------------ERARAVGPPTRALPNQLSVSGLVELARDPVGARQRLVHRLPTRPDP 933 LA ERA + ALP L+ S +V L DP + LV LP RP Sbjct: 898 LAELDREARLLLAEERAARLARTDVALPASLTASQIVRLRADPEAFARELVRPLPRRPVA 957 Query: 934 HAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIA 993 A+ G FH WV++ + L D DLPGAAD+++ +DL LQ+AF + + AR P A Sbjct: 958 AARRGTRFHAWVEEIFDYRALIDTEDLPGAADAELTD-DDLRSLQQAFLRTAYGARRPFA 1016 Query: 994 VEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAW 1053 +E PFE+ + +VRGRIDAV++ G VVDWKTG +QL +YR+AW Sbjct: 1017 IEAPFELRLAGRIVRGRIDAVYDLGGGRWEVVDWKTGRSDADD-------LQLGIYRLAW 1069 Query: 1054 AALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAELLA 1093 A LRG S+V AF YVRTG V P L + LA+LLA Sbjct: 1070 ARLRGVDPSAVDAAFLYVRTGAVVRPPTLSE-EELADLLA 1108 >tr|D1BAW5|D1BAW5_9MICO Tax_Id=446469 SubName: Full=DNA/RNA helicase, superfamily I;[Sanguibacter keddieii DSM 10542] Length = 1111 Score = 582 bits (1499), Expect = e-163 Identities = 423/1148 (36%), Positives = 548/1148 (47%), Gaps = 105/1148 (9%) Query: 3 PRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAE 62 P S +IA LG PT EQ AVI AP P++V+AGAG+GKTETM+ARVVWL+ANG E Sbjct: 6 PTLSAADIADLLGQHRPTPEQTAVIEAPLAPMLVVAGAGSGKTETMSARVVWLIANGLVE 65 Query: 63 PGQVLGLTFTRKAAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--STYHAFAGSLLR 120 P +VLGLTFTRKAAG+ STY+++A SL+ Sbjct: 66 PQEVLGLTFTRKAAGELSDRVGRRLRQLRRSRAGSGGSALDALDRPTISTYNSYAASLVG 125 Query: 121 DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV 180 DHGL + EP RLLSE WQ+A ++V + G+L T + V A VL L L+EHL+ Sbjct: 126 DHGLRIGREPGARLLSEASSWQVASDLVESWHGDLGTDAAVSTVVAAVLDLSNALSEHLL 185 Query: 181 DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA 240 + R+ L + + P G +R + L ++ + ER L+ +++A +R RA Sbjct: 186 TVAEAREQVARLVEQITSTPFGGKRRSLHAD--LGKLARSLGERHALLEVVEAFQQRKRA 243 Query: 241 AKVMDFGMQMXXXXXXXXTCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD 300 +DFG Q+ V R+RY VVLLDEYQDT ++Q LS+LFG D Sbjct: 244 MDALDFGDQVSLAAQLAVEVDAVAAGERARYAVVLLDEYQDTSYAQIRLLSSLFG----D 299 Query: 301 GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN 360 G +TAVGDP QSIYGWRGASA+ RF F +G PA V L TSWRN L +AN Sbjct: 300 GHPVTAVGDPNQSIYGWRGASASGPARFPDQFRDREGRPAAVHRLSTSWRNDLAILDVAN 359 Query: 361 AISAEARRRSV--AVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGV 418 S ++ +L RP A G+V A V+ E IA+ + ++ Sbjct: 360 TTSRPLYLADPDNSLPSLEPRPSAGLGSVHGVYSATVEEEGAAIAEFVAKRWEPGTT--- 416 Query: 419 SPPTAAVLVRRNXXXXXXXXXXXXRGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGA 478 TAAVL R RG+PVEVVGL GLL+ PEV DLVA+L +V DP+ G Sbjct: 417 ---TAAVLCRARSQFPAIEAALRKRGLPVEVVGLGGLLTTPEVVDLVALLEVVHDPSRGD 473 Query: 479 AAMRVLTGPRWRLGGSDXXXXXXXXXXXXGGPQXXXXXXXXXXXXXXXXXXXXXCLADAI 538 + MR+LTGPR LG +D + DA+ Sbjct: 474 SLMRLLTGPRLNLGAADLHAL--------ASRSAELGRRNRADRPVEGDVTDERSIVDAL 525 Query: 539 CDPGPADW-------YSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVR 591 D W +S AG+ R+ +LA L LR LP+LV R LGLD ++ Sbjct: 526 DDLPAEGWVGPDGRSFSDAGWGRLRSLAGMLRELRALTYLSLPELVDRAERALGLDIEMA 585 Query: 592 XXXXXXXXXXXXE----------HLDAFADVVADYAERAAISAGSALSTKASVDGLLAYL 641 HLDAF DV A +A+ + + A++ LA+L Sbjct: 586 LVAARARDDAPSTRPTADPRGRAHLDAFRDVAATFADTSQL---------ATLGAFLAWL 636 Query: 642 DVAAEVENGLPPAQLTVARDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASR------ 695 A + E GL Q + VQ++TVHA+KGLEW VVAV L G FPST + Sbjct: 637 STAQQRERGLDRPQGAPDPEAVQLITVHASKGLEWDVVAVPGLVDGAFPSTRTTGDKGPT 696 Query: 696 -SSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEE 754 S WLT G+LP LRGD + L + D SA N + + RE+ + V EE Sbjct: 697 SSGWLTGLGQLPFPLRGDARDLPELSLAGADDSAELNARLVD-----FRERCGEHEVAEE 751 Query: 755 RRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWD 814 RRL YV TRA +L++G W + KP PS FL EL + G + ++ Sbjct: 752 RRLAYVAFTRARSDLLLTGAWW-RSATKPSTPSLFLTELHE-----------AGVLAEFT 799 Query: 815 PA--PVAGERNPLLDDVVEAVWP----------------TDPLATRRGDVE---RGARLV 853 A P G NP D EA+WP D AT R +E R LV Sbjct: 800 VAEQPEPGTSNPREDLTPEALWPPVDEPADGPEGSAAEAADGSATLREPLELLRRSRDLV 859 Query: 854 AEAISXXXXXXXXXXXXXXXXIEGWTADVDALLAER-ARAVGPPTRALPNQLSVSGLVEL 912 +A+ T + LLAER R P +S SGLVE+ Sbjct: 860 LDALVDVAQHPASTEPVLARDGTDLTELSEILLAERLTRRTAVTAMEFPAHVSASGLVEI 919 Query: 913 ARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDLPGAADSDVGQVE 972 ARD L +P +P H++ G AFH WV++ YG+ LFDL D+PGA D V Sbjct: 920 ARDRDAYALALRRPVPRQPSVHSRRGTAFHLWVERQYGSTSLFDLDDMPGADDDLVDGDT 979 Query: 973 DLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPD--------GGATV 1024 LA LQ F S W+ P+ VEV + + + R RIDAVF DP+ G V Sbjct: 980 ALADLQRTFEASVWSGLVPLEVEVAIDTMIAGVITRTRIDAVFLDPEQPGGPDRAPGVVV 1039 Query: 1025 VDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPD 1084 VDWKTG P EA R VQLAVYR+AW+ G P V AF+YV TV P L Sbjct: 1040 VDWKTGRAPTDREAARAREVQLAVYRIAWSQWSGTPLEDVSAAFYYVADDTTVRPQRLA- 1098 Query: 1085 GMALAELL 1092 G+A E L Sbjct: 1099 GLAELEAL 1106 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.135 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 7,672,121,020 Number of extensions: 308762479 Number of successful extensions: 805564 Number of sequences better than 10.0: 5247 Number of HSP's gapped: 800004 Number of HSP's successfully gapped: 10385 Length of query: 1101 Length of database: 3,846,993,858 Length adjustment: 149 Effective length of query: 952 Effective length of database: 2,166,988,611 Effective search space: 2062973157672 Effective search space used: 2062973157672 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 86 (37.7 bits)