BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1378 (473 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HFJ2|B2HFJ2_MYCMM Tax_Id=216594 SubName: Full=Transcription... 926 0.0 tr|A0PR73|A0PR73_MYCUA Tax_Id=362242 SubName: Full=Transcription... 920 0.0 tr|Q744P3|Q744P3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 789 0.0 tr|A0Q9P6|A0Q9P6_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 788 0.0 tr|A0R6R5|A0R6R5_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding p... 721 0.0 tr|Q7U0L0|Q7U0L0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 606 e-171 tr|O06581|O06581_MYCTU Tax_Id=1773 SubName: Full=DNA-binding pro... 606 e-171 tr|C6DV31|C6DV31_MYCTK Tax_Id=478434 SubName: Full=Transcription... 606 e-171 tr|C1AMC4|C1AMC4_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 606 e-171 tr|A5U1H6|A5U1H6_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 606 e-171 tr|A1KHS0|A1KHS0_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 606 e-171 tr|A5WLF6|A5WLF6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 606 e-171 tr|A4KG58|A4KG58_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 606 e-171 tr|A2VH41|A2VH41_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 606 e-171 tr|B1ML40|B1ML40_MYCA9 Tax_Id=561007 SubName: Full=Probable tran... 593 e-167 tr|C0ZQH2|C0ZQH2_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre ... 549 e-154 tr|D0L8Q4|D0L8Q4_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 547 e-153 tr|C3JF42|C3JF42_RHOER Tax_Id=596309 SubName: Full=DNA-binding p... 546 e-153 tr|C1B6J2|C1B6J2_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 530 e-148 tr|Q5YRZ9|Q5YRZ9_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-b... 514 e-144 tr|Q2RRX9|Q2RRX9_RHORT Tax_Id=269796 SubName: Full=Transcription... 481 e-133 tr|A5VFR3|A5VFR3_SPHWW Tax_Id=392499 SubName: Full=Transcription... 476 e-132 tr|A1WR95|A1WR95_VEREI Tax_Id=391735 SubName: Full=Transcription... 470 e-130 tr|B6IXX7|B6IXX7_RHOCS Tax_Id=414684 SubName: Full=Putative unch... 459 e-127 tr|C7MW49|C7MW49_SACVD Tax_Id=471857 SubName: Full=Predicted tra... 456 e-126 tr|Q1N883|Q1N883_9SPHN Tax_Id=314266 SubName: Full=Transcription... 456 e-126 tr|C9CWQ0|C9CWQ0_9RHOB Tax_Id=644076 SubName: Full=DNA-binding p... 454 e-125 tr|Q07LS5|Q07LS5_RHOP5 Tax_Id=316055 SubName: Full=Transcription... 452 e-125 tr|Q210Y2|Q210Y2_RHOPB Tax_Id=316056 SubName: Full=Transcription... 447 e-123 tr|B3QGB8|B3QGB8_RHOPT Tax_Id=395960 SubName: Full=Transcription... 443 e-122 tr|C6QII4|C6QII4_9RHIZ Tax_Id=582899 SubName: Full=Transcription... 442 e-122 tr|A1B1R0|A1B1R0_PARDP Tax_Id=318586 SubName: Full=Transcription... 441 e-121 tr|A9C129|A9C129_DELAS Tax_Id=398578 SubName: Full=Transcription... 437 e-120 tr|B9MAT1|B9MAT1_DIAST Tax_Id=535289 SubName: Full=Transcription... 436 e-120 tr|C6WFM0|C6WFM0_ACTMD Tax_Id=446462 SubName: Full=Transcription... 436 e-120 tr|A1W6F4|A1W6F4_ACISJ Tax_Id=232721 SubName: Full=Transcription... 436 e-120 tr|A0QQX1|A0QQX1_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding p... 429 e-118 tr|B2HQT0|B2HQT0_MYCMM Tax_Id=216594 SubName: Full=Transcription... 426 e-117 tr|B1MIH0|B1MIH0_MYCA9 Tax_Id=561007 SubName: Full=Probable tran... 425 e-117 tr|Q0SEV4|Q0SEV4_RHOSR Tax_Id=101510 SubName: Full=Possible DNA ... 424 e-116 tr|C1B091|C1B091_RHOOB Tax_Id=632772 SubName: Full=Putative Xre ... 424 e-116 tr|B1VXK5|B1VXK5_STRGG Tax_Id=455632 SubName: Full=Putative DNA-... 424 e-116 tr|Q73SW4|Q73SW4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 422 e-116 tr|Q82LG8|Q82LG8_STRAW Tax_Id=33903 SubName: Full=Putative DNA-b... 421 e-116 tr|Q0RN86|Q0RN86_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-... 421 e-115 tr|A0QLM4|A0QLM4_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding p... 421 e-115 tr|A0PVX1|A0PVX1_MYCUA Tax_Id=362242 SubName: Full=Transcription... 421 e-115 tr|Q1BEC9|Q1BEC9_MYCSS Tax_Id=164756 SubName: Full=Transcription... 421 e-115 tr|A3PU61|A3PU61_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 421 e-115 tr|A1UAK5|A1UAK5_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 421 e-115 >tr|B2HFJ2|B2HFJ2_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 473 Score = 926 bits (2392), Expect = 0.0 Identities = 464/473 (98%), Positives = 465/473 (98%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 +PKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP Sbjct: 1 MPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 Query: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA Sbjct: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR Sbjct: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 Query: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL Sbjct: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 Query: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF Sbjct: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 Query: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR Sbjct: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 Query: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL Sbjct: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 Query: 421 TDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER 473 TDTE CKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER Sbjct: 421 TDTEAIAAIGAGCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER 473 >tr|A0PR73|A0PR73_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 483 Score = 920 bits (2377), Expect = 0.0 Identities = 461/473 (97%), Positives = 463/473 (97%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP Sbjct: 11 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 70 Query: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA Sbjct: 71 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 130 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAE+MFGRHGL LGGLDAQLAR Sbjct: 131 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEQMFGRHGLHLGGLDAQLAR 190 Query: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 LLGDNLG TVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL Sbjct: 191 LLGDNLGITVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 250 Query: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF Sbjct: 251 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 310 Query: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR Sbjct: 311 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 370 Query: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 PG+FLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL Sbjct: 371 PGQFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 430 Query: 421 TDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER 473 TDTE CKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER Sbjct: 431 TDTEAIAAIGAGCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTER 483 >tr|Q744P3|Q744P3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 502 Score = 789 bits (2037), Expect = 0.0 Identities = 391/473 (82%), Positives = 421/473 (89%), Gaps = 3/473 (0%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 V KTFAGARLRRLRE+ GLTQVALARALGLSTSYVNQLENDQRPITV VLL L ERFDLP Sbjct: 29 VAKTFAGARLRRLREEQGLTQVALARALGLSTSYVNQLENDQRPITVPVLLTLTERFDLP 88 Query: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 T YFAPDSDARL++DLREV AE PATP Q+EELVARMPA+GQTLVNLHRRL+D TA+LEA Sbjct: 89 TQYFAPDSDARLIADLREVLAETPATPGQVEELVARMPAIGQTLVNLHRRLHDTTADLEA 148 Query: 121 LHSRATADVSAVSG---QPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQ 177 L+SRA D+S G QPMPFEEVRDFFYDRKNYIGELD+AAEEMF + LR+GGLD Q Sbjct: 149 LYSRANLDISDTPGLPHQPMPFEEVRDFFYDRKNYIGELDVAAEEMFDHNRLRIGGLDGQ 208 Query: 178 LARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQ 237 LARLLG+ LG VV+DDGQ L PNSKR+F PESKT+YLARWL+ GQRAFQLATQIALLTQ Sbjct: 209 LARLLGEQLGVAVVIDDGQLLAPNSKRLFDPESKTVYLARWLHPGQRAFQLATQIALLTQ 268 Query: 238 ADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFE 297 +LIT IIAGDDQLSD+ARGVARIGLANYFAGALLLPYR FLDAA RYDIDQL+RRFE Sbjct: 269 PELITAIIAGDDQLSDDARGVARIGLANYFAGALLLPYRRFLDAAERVRYDIDQLSRRFE 328 Query: 298 VGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQA 357 VGFET+CHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWV+H A Sbjct: 329 VGFETVCHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVVHHA 388 Query: 358 FARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVG 417 F+RPG+FLTQVAQMPD+RTYFWIARTT+ PSRYLGP KSFAIGLGCD+ HADKLIYSVG Sbjct: 389 FSRPGQFLTQVAQMPDDRTYFWIARTTSGGPSRYLGPHKSFAIGLGCDVDHADKLIYSVG 448 Query: 418 VDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAIS 470 +DL DTE CKICDR +CPQRAFPYLGRPV VDPH STDLPYPPAI+ Sbjct: 449 IDLRDTESIVPIGAGCKICDRAACPQRAFPYLGRPVSVDPHRSTDLPYPPAIT 501 >tr|A0Q9P6|A0Q9P6_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, XRE family protein;[Mycobacterium avium] Length = 474 Score = 788 bits (2034), Expect = 0.0 Identities = 389/471 (82%), Positives = 420/471 (89%), Gaps = 3/471 (0%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTFAGARLRRLRE+ GLTQVALAR LGLSTSYVNQLENDQRPITV VLL L ERFDLPT Sbjct: 3 KTFAGARLRRLREEQGLTQVALARVLGLSTSYVNQLENDQRPITVPVLLTLTERFDLPTQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEALH 122 YFAPDSDARL++DLREV AE PATP Q+EELVARMPA+GQTLVNLHRRL+D TA+LEAL+ Sbjct: 63 YFAPDSDARLIADLREVLAETPATPGQVEELVARMPAIGQTLVNLHRRLHDTTADLEALY 122 Query: 123 SRATADVSAVSG---QPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLA 179 SRA D+S G QPMPFEEVRDFFYDRKNYIGELD+AAEEMF + LR+GGLD QLA Sbjct: 123 SRANLDISDTPGLPHQPMPFEEVRDFFYDRKNYIGELDVAAEEMFDHNRLRIGGLDGQLA 182 Query: 180 RLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQAD 239 +LLG+ LG VV+DDGQ L PNSKR+F PESKT+YLARWL+ GQRAFQLATQIALLTQ + Sbjct: 183 QLLGEQLGVAVVIDDGQLLAPNSKRLFDPESKTVYLARWLHPGQRAFQLATQIALLTQPE 242 Query: 240 LITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVG 299 LIT IIAGDDQLSD+ARGVARIGLANYFAGALLLPYR FLDAA RYDIDQL+RRFEVG Sbjct: 243 LITAIIAGDDQLSDDARGVARIGLANYFAGALLLPYRRFLDAAERVRYDIDQLSRRFEVG 302 Query: 300 FETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFA 359 FET+CHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWV+H AF+ Sbjct: 303 FETVCHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVVHHAFS 362 Query: 360 RPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVD 419 RPG+FLTQVAQMPD+RTYFWIARTT+ PSRYLGP KSFAIGLGCD+ HADKLIYSVG+D Sbjct: 363 RPGQFLTQVAQMPDDRTYFWIARTTSGGPSRYLGPHKSFAIGLGCDVDHADKLIYSVGID 422 Query: 420 LTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAIS 470 L DTE CKICDRP+CPQRAFPYLGRPV VDPH STDLPYPPAI+ Sbjct: 423 LRDTESIVPIGAGCKICDRPACPQRAFPYLGRPVSVDPHRSTDLPYPPAIT 473 >tr|A0R6R5|A0R6R5_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding protein;[Mycobacterium smegmatis] Length = 472 Score = 721 bits (1860), Expect = 0.0 Identities = 351/464 (75%), Positives = 397/464 (85%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLRRLRE+HGLTQVALARALGLSTSY+NQLENDQRP+TV VLL+L+ERFDLPTH Sbjct: 3 KTFIGPRLRRLREEHGLTQVALARALGLSTSYINQLENDQRPVTVPVLLSLSERFDLPTH 62 Query: 63 YFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEALH 122 YF PDSDARLVSDLR++ + AT AQIEELVARMPAVGQTLV LHRRL+DAT ELEA+H Sbjct: 63 YFTPDSDARLVSDLRDILVDSAATQAQIEELVARMPAVGQTLVTLHRRLFDATTELEAMH 122 Query: 123 SRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLARLL 182 +RA+AD QPMPFEEVRDFFYDRKN++ ELD AAE +F R GLR+GGLDAQLA LL Sbjct: 123 TRASADAPVPLQQPMPFEEVRDFFYDRKNHVAELDQAAEGVFDRRGLRIGGLDAQLAELL 182 Query: 183 GDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADLIT 242 D LG VV+DDGQ L+ N KR+++P+ TLY+ARWL+ GQRAFQ+ATQ ALLTQA+LI Sbjct: 183 SDELGINVVIDDGQVLSANGKRIYRPDHATLYVARWLHPGQRAFQIATQYALLTQAELIA 242 Query: 243 GIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGFET 302 ++A D LS EAR VARIGLANY+AGALLLPYR FL AA RYDID+LARRFEVGFET Sbjct: 243 ELVADADDLSTEAREVARIGLANYYAGALLLPYRMFLAAAEELRYDIDRLARRFEVGFET 302 Query: 303 ICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFARPG 362 +CHRLSTLQRP+ARGVPFIFVRTD+AGNISKRQSATAFHFSRVGGNCPLWV+HQAFA+PG Sbjct: 303 VCHRLSTLQRPDARGVPFIFVRTDNAGNISKRQSATAFHFSRVGGNCPLWVVHQAFAQPG 362 Query: 363 RFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDLTD 422 +F+TQVAQMPD R+YFWIARTT S YLGP KSFAIGLGCDLAHA +LIYS G+DL D Sbjct: 363 QFVTQVAQMPDGRSYFWIARTTAPSQSSYLGPTKSFAIGLGCDLAHAHRLIYSAGIDLAD 422 Query: 423 TEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 CK+C+RP+CPQRAFPY+GRPV+VDPH S+DLPYP Sbjct: 423 EAAAVPIGAGCKVCERPACPQRAFPYIGRPVKVDPHASSDLPYP 466 >tr|Q7U0L0|Q7U0L0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATOR PROTEIN;[Mycobacterium bovis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|O06581|O06581_MYCTU Tax_Id=1773 SubName: Full=DNA-binding protein, putative; SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATOR PROTEIN;[Mycobacterium tuberculosis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|C6DV31|C6DV31_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|C1AMC4|C1AMC4_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulator protein;[Mycobacterium bovis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A5U1H6|A5U1H6_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulator protein;[Mycobacterium tuberculosis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A1KHS0|A1KHS0_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulator protein;[Mycobacterium bovis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A5WLF6|A5WLF6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A4KG58|A4KG58_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulator protein;[Mycobacterium tuberculosis str. Haarlem] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|A2VH41|A2VH41_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 486 Score = 606 bits (1562), Expect = e-171 Identities = 310/467 (66%), Positives = 357/467 (76%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF+GARLRRLR++ GLTQVALA+AL LSTSYVNQLENDQRPITV VLL L ERFDL Sbjct: 15 RTFSGARLRRLRQERGLTQVALAKALDLSTSYVNQLENDQRPITVPVLLLLTERFDLSAQ 74 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 YF+ DSDARLV+DL +VF E + AQIEE VARMP VG +LV +HRRL AT EL Sbjct: 75 YFSSDSDARLVADLSDVFTDIGVEHAVSGAQIEEFVARMPEVGHSLVAVHRRLRAATEEL 134 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E SRATA+ +PMPFEEVRDFFYDR NYI +LD+AAE MF G+R GGLD QL Sbjct: 135 EGYRSRATAETELPPARPMPFEEVRDFFYDRNNYIHDLDMAAERMFTESGMRTGGLDIQL 194 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 A L+ D G +VV+DD +L +KR + P++K L +A WL GQRAFQ+ATQ+AL+ Q+ Sbjct: 195 AELMRDRFGISVVIDD--NLPDTAKRRYHPDTKVLRVAHWLMPGQRAFQIATQLALVGQS 252 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI+ I+A DDQLS EARGVARIGLANYFAGA LLPYR F AA RYDID L RRF V Sbjct: 253 DLISSIVATDDQLSTEARGVARIGLANYFAGAFLLPYREFHRAAEQLRYDIDLLGRRFGV 312 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PFIFVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 313 GFETVCHRLSTLQRPRQRGIPFIFVRTDKAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 372 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+P R + QVAQMPD R+YFW+A+TT A+ YLGP K+FA+GLGCDLAHA KL+YS GV Sbjct: 373 AQPERIVRQVAQMPDGRSYFWVAKTTAADGLGYLGPHKNFAVGLGCDLAHAHKLVYSTGV 432 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 L D CKIC+R SC QRAFPYLG V VD + + LPY Sbjct: 433 VLDDPSTEVPIGAGCKICNRTSCAQRAFPYLGGRVAVDENAGSSLPY 479 >tr|B1ML40|B1ML40_MYCA9 Tax_Id=561007 SubName: Full=Probable transcriptional regulator protein;[Mycobacterium abscessus] Length = 473 Score = 593 bits (1530), Expect = e-167 Identities = 298/470 (63%), Positives = 356/470 (75%), Gaps = 7/470 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 + FAGARLRRLRE+ GLTQ ALAR L LSTSYVNQLEND RP+TV+VLL L ERFDL H Sbjct: 3 RPFAGARLRRLREERGLTQAALARVLDLSTSYVNQLENDTRPVTVAVLLRLTERFDLSPH 62 Query: 63 YFAPDSDARLVSDLREVFAE---GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELE 119 YF+PDSDARLV+DL E+F E G + Q+EELVARMP+VGQTLV +HRRL D TAELE Sbjct: 63 YFSPDSDARLVADLGEIFTEAAVGEVSDLQLEELVARMPSVGQTLVGMHRRLRDVTAELE 122 Query: 120 ALHSRATADVSAVSGQ----PMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLD 175 + + A+ S + PMPFEEVRDFFYD KNY+GELD AAE++F +GL +GGLD Sbjct: 123 SYRATENAETIGDSVREPLRPMPFEEVRDFFYDHKNYLGELDTAAEDLFEHYGLHVGGLD 182 Query: 176 AQLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALL 235 QLA +L +LG V ++ + +SKR F + L +A WL GQRAFQ+ATQ+AL+ Sbjct: 183 IQLATVLKQDLGIAVAVNKAGEPSDSSKRRFDATAGVLRIAHWLTPGQRAFQMATQLALV 242 Query: 236 TQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARR 295 TQ + + I+AG DQLS EA GVARIGLANYFAGA LLPY+ F AA S+RYD+D LAR+ Sbjct: 243 TQTETMAAILAGADQLSPEAIGVARIGLANYFAGAFLLPYKQFHHAAESSRYDVDILARQ 302 Query: 296 FEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIH 355 FEVG ET+CHRLSTLQRP+ RGVPFI VRTD AGNISKRQSATAFHFSRVGGNCPLWV+H Sbjct: 303 FEVGHETVCHRLSTLQRPSMRGVPFILVRTDRAGNISKRQSATAFHFSRVGGNCPLWVVH 362 Query: 356 QAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYS 415 +AF+ PG+F+TQVA+MPD RTYFW+ART++ +L KSFAIGLGCD+AHA +L+YS Sbjct: 363 EAFSNPGQFVTQVAEMPDGRTYFWVARTSSTSTGGFLSTPKSFAIGLGCDIAHAHRLVYS 422 Query: 416 VGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+ + D CK+C R SC QRAFPY+GR V VD S+ LPY Sbjct: 423 TGIAIDDPSTAVPIGPGCKVCVRESCAQRAFPYIGRSVHVDEDASSGLPY 472 >tr|C0ZQH2|C0ZQH2_RHOE4 Tax_Id=234621 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus erythropolis] Length = 473 Score = 549 bits (1414), Expect = e-154 Identities = 285/474 (60%), Positives = 349/474 (73%), Gaps = 15/474 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K +AGARLRRLRE+ L+Q ALA+AL LS SYVNQLENDQRP+TV VLL L FDL Sbjct: 3 KMYAGARLRRLREERNLSQSALAKALELSPSYVNQLENDQRPLTVPVLLKLNAEFDLDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAE----GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA DSDARLV+D+ AE G + A+++ELVARMPAVG+TLV LHRRL+ AT +L Sbjct: 63 FFASDSDARLVADVHHALAETSESGEVSLAEVDELVARMPAVGRTLVMLHRRLHAATEQL 122 Query: 119 EA----LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGL 174 + L A +DVS V PMP+EEVRDFFYDRKN+I LD AAE+MF +GL +G + Sbjct: 123 DQFSTQLSGEAASDVSLV---PMPYEEVRDFFYDRKNHIAVLDDAAEQMFVDNGLSVGAV 179 Query: 175 DAQLARLLGDNLGTTVVL--DDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQI 232 D QLARLL D G TV + D+ L P KR + P+ L LAR L+ GQRAFQ+A Q+ Sbjct: 180 DLQLARLLRDQHGVTVTIRTDEPDKLGP--KRFYDPDKSVLTLARRLSAGQRAFQIAMQL 237 Query: 233 ALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQL 292 A TQAD+I ++A D+ LS E+ +ARIGLA+YFAGALLLPY FL++A + RYDID L Sbjct: 238 AFFTQADVIDSLVAEDESLSAESAALARIGLAHYFAGALLLPYTQFLESAEALRYDIDLL 297 Query: 293 ARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLW 352 + +FEVGFET+CHRLSTLQR RG+PF FVRTD AGNISKRQSATAFHFSRVGG+CPLW Sbjct: 298 SLKFEVGFETVCHRLSTLQRHGQRGIPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLW 357 Query: 353 VIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKL 412 VIH+AFA PGR LTQVA+MPD RTY W+ARTT + YL P ++FA+GLGCD+ +AD++ Sbjct: 358 VIHEAFASPGRILTQVAKMPDGRTYLWVARTTHSGGLGYLAPERNFAVGLGCDIGYADRM 417 Query: 413 IYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 +YS G+ D CK+CDRP+C QRAFP LGR + V ++S+ LPYP Sbjct: 418 VYSHGIQTDDPATIVPIGAGCKVCDRPACSQRAFPQLGRSISVSQNSSSHLPYP 471 >tr|D0L8Q4|D0L8Q4_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 474 Score = 547 bits (1409), Expect = e-153 Identities = 286/468 (61%), Positives = 335/468 (71%), Gaps = 9/468 (1%) Query: 5 FAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTHYF 64 F GARLRRLR++ GL+Q LAR + LSTSYVNQLENDQRPITV VLL L FDL YF Sbjct: 2 FIGARLRRLRDERGLSQAGLARRVELSTSYVNQLENDQRPITVPVLLTLTREFDLDADYF 61 Query: 65 APDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 APD DARLV+DL +V G T A+I ELVARMPAVG+TLV +HRRL A ELE+ Sbjct: 62 APDGDARLVADLADVLTAQPDSGEVTRAEITELVARMPAVGRTLVGMHRRLIAADTELES 121 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 +R ++ + PMPFEEVRDFFYDRKNYI LD AAE +F RH LR+GGLD QLA Sbjct: 122 HRARISSG-GVPATTPMPFEEVRDFFYDRKNYIDSLDEAAETLFDRHRLRIGGLDLQLAD 180 Query: 181 LLGDNLGTTVVLD---DGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQ 237 LL + G +V +D D + + KR F E ++LA L GQRAFQLATQ+ALLTQ Sbjct: 181 LLAEEFGISVSIDHHADPRDAARSPKRRFDEEHGVIHLAGRLTSGQRAFQLATQLALLTQ 240 Query: 238 ADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFE 297 A +I ++ D L + +ARIGLANYFAGALLLPY FL AA + RYD++ L F Sbjct: 241 AAIIDALVTEADNLHPSSVPLARIGLANYFAGALLLPYERFLRAAETVRYDVELLGLTFG 300 Query: 298 VGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQA 357 VGFET+CHRLSTLQRP RG+PFI VRTD AGNISKRQSATAFHFSRVGG+CPLWV+H A Sbjct: 301 VGFETVCHRLSTLQRPRNRGIPFILVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHDA 360 Query: 358 FARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVG 417 FA PGR +TQV+QMPD R+YFW+ARTT + +L P KSFAIGLGCD+AHA +LIY+ G Sbjct: 361 FATPGRIVTQVSQMPDGRSYFWLARTTD-DHHGFLSPRKSFAIGLGCDVAHAQRLIYASG 419 Query: 418 VDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 VDL+D CK+C RP CPQRAFP LG P+ VD S +PY Sbjct: 420 VDLSDDSTVVPIGAGCKVCSRPECPQRAFPQLGHPIHVDAAVSDSVPY 467 >tr|C3JF42|C3JF42_RHOER Tax_Id=596309 SubName: Full=DNA-binding protein;[Rhodococcus erythropolis SK121] Length = 473 Score = 546 bits (1406), Expect = e-153 Identities = 281/471 (59%), Positives = 347/471 (73%), Gaps = 9/471 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K +AGARLRRLRE+ L+Q ALA+AL LS SYVNQLENDQRP+TV VLL L FDL Sbjct: 3 KMYAGARLRRLREERNLSQSALAKALELSPSYVNQLENDQRPLTVPVLLKLNAEFDLDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAE----GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA DSDARLV+D+ AE G + A+++ELVARMPAVG+TLV LHRRL+ AT +L Sbjct: 63 FFASDSDARLVADVHHALAETSESGDVSLAEVDELVARMPAVGRTLVMLHRRLHAATEQL 122 Query: 119 EALHSRATAD-VSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQ 177 + ++ + + S VS PMP+EEVRDFFYDRKN+I LD AAE+MF +GL +G +D Q Sbjct: 123 DQFSTQLSGEPASDVSLVPMPYEEVRDFFYDRKNHIAVLDDAAEQMFLDNGLSVGAVDLQ 182 Query: 178 LARLLGDNLGTTVVL--DDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALL 235 LARLL D G TV + D+ L P KR + P L LAR L+ GQRAFQ+A Q+A Sbjct: 183 LARLLRDQHGVTVTIRTDEPDKLGP--KRYYDPNKSVLTLARRLSAGQRAFQIAMQLAFF 240 Query: 236 TQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARR 295 TQAD+I ++A D+ LS E+ +AR+GLA+YFAGALLLPY FL +A + RYDID L+ + Sbjct: 241 TQADVIDSLVAEDESLSAESAALARVGLAHYFAGALLLPYTQFLQSAEALRYDIDLLSLK 300 Query: 296 FEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIH 355 FEVGFET+CHRLSTLQR RG+PF FVRTD AGNISKRQSATAFHFSRVGG+CPLWVIH Sbjct: 301 FEVGFETVCHRLSTLQRHGQRGIPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVIH 360 Query: 356 QAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYS 415 +AFA PGR LTQVA+MPD RTY W+ARTT + YL P ++FA+GLGCD+ +AD+++YS Sbjct: 361 EAFASPGRILTQVAKMPDGRTYLWVARTTHSGGLGYLAPERNFAVGLGCDIGYADRMVYS 420 Query: 416 VGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 G+ D CK+CDRP+C QRAFP LGR + V ++S+ LPYP Sbjct: 421 HGIQTDDPATIVPIGAGCKVCDRPACSQRAFPQLGRSISVSENSSSHLPYP 471 >tr|C1B6J2|C1B6J2_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 473 Score = 530 bits (1365), Expect = e-148 Identities = 272/469 (57%), Positives = 332/469 (70%), Gaps = 5/469 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K +AG RLRRLRE+ GLTQ ALA+ LGLSTSYVNQLENDQRP+TV VLL L DL Sbjct: 3 KMYAGGRLRRLREERGLTQSALAKTLGLSTSYVNQLENDQRPLTVPVLLRLNADLDLDMS 62 Query: 63 YFAPDSDARLVSDLREVFAEGPA----TPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA D+DARL++DL+EVF E P + I+EL++R+PA + LV LHRRL ATA+L Sbjct: 63 FFAADTDARLLADLQEVFGENPEAADLSTTDIDELISRVPAAARVLVGLHRRLRGATAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 E + ++ S MP+E+VRDFFYD++N+I ELDIAAE +F L LGG+D QL Sbjct: 123 EQFSTGVDGTLADPS-TAMPYEDVRDFFYDQRNHIPELDIAAENLFTSRDLTLGGMDLQL 181 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 +RLL D TV + P KR F P+++ L LAR L GQRAFQLATQ+A LTQA Sbjct: 182 SRLLHDEHDITVTIRTDDPDRPGPKRTFDPQTRVLTLARRLAPGQRAFQLATQLAFLTQA 241 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 + I I+ + L ++R +ARIGLANYFAGAL+LPY PFL +A + RYDID L+ +FEV Sbjct: 242 ETIDRIVTRTESLPAQSRDLARIGLANYFAGALILPYTPFLASAEALRYDIDLLSMKFEV 301 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFETICHRLSTLQR RGVPF FVRTD AGNISKRQSATAFHFSRVGG+CPLWV+H AF Sbjct: 302 GFETICHRLSTLQRRGQRGVPFFFVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHDAF 361 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A PGR TQ+AQMPD R+Y W+ARTT YL + FAIGLGCDL +A KL+YS G+ Sbjct: 362 ATPGRIRTQIAQMPDGRSYLWLARTTDESTPGYLAQKRDFAIGLGCDLTYASKLVYSHGL 421 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPP 467 + D CK+C+R C QRAFP LGR + VD +++ +PY P Sbjct: 422 QIDDPSTAVPIGPGCKVCERAGCAQRAFPQLGRTINVDENSAATIPYTP 470 >tr|Q5YRZ9|Q5YRZ9_NOCFA Tax_Id=37329 SubName: Full=Putative DNA-binding protein;[Nocardia farcinica] Length = 473 Score = 514 bits (1325), Expect = e-144 Identities = 263/468 (56%), Positives = 325/468 (69%), Gaps = 5/468 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K +AGARLRRLRE+ +TQ ALA++L LS SY+NQLE DQRP+T+ VLL L FDL Sbjct: 3 KMYAGARLRRLREERRMTQAALAKSLDLSPSYLNQLERDQRPLTIPVLLKLNSTFDLDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAE---GPATP-AQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA DSDARLVSDL +V + G + P ++EEL R P V + LV +HRRL AT +L Sbjct: 63 FFAADSDARLVSDLHDVLVDAAGGDSAPLTEVEELATRQPEVARILVAMHRRLRAATDQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 + L +R A G PMP+E+VRDFFYD N+I +LD AAE+MF GL +G LD QL Sbjct: 123 DLLSARVATPAGA-PGVPMPYEDVRDFFYDHHNHIPQLDHAAEQMFEECGLTIGSLDRQL 181 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 AR+ + G TV++ + KR + PES+TL LAR L GQRAFQ+A + L Sbjct: 182 ARVAEERAGVTVLVRGDGADPAIPKRHYDPESRTLTLARRLRPGQRAFQIAATLGFLLHG 241 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 D + ++A L+ E+R +AR+GL NYFA AL+LPY FL +A RYDID L+ RFEV Sbjct: 242 DQLDAVLAETPSLTGESRALARVGLGNYFAAALILPYGRFLRSAEELRYDIDLLSLRFEV 301 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQR RGVPF VRTD AGNISKRQSATAFHFSRVGG+CPLWV+H+AF Sbjct: 302 GFETVCHRLSTLQRQGQRGVPFFLVRTDRAGNISKRQSATAFHFSRVGGSCPLWVVHEAF 361 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A+PGR LTQVA MPD R Y WIARTT P + + FAIGLGCD+ +AD+L+YS G+ Sbjct: 362 AQPGRILTQVAAMPDGRRYLWIARTTAPAPRGFGDATREFAIGLGCDIEYADRLVYSAGL 421 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 + D CK+C+RP+CPQRAFP +G P+ V HTSTDLPYP Sbjct: 422 PVDDPAAAVPIGAGCKVCERPACPQRAFPQIGSPLTVSEHTSTDLPYP 469 >tr|Q2RRX9|Q2RRX9_RHORT Tax_Id=269796 SubName: Full=Transcriptional regulator, XRE family;[Rhodospirillum rubrum] Length = 474 Score = 481 bits (1237), Expect = e-133 Identities = 249/469 (53%), Positives = 311/469 (66%), Gaps = 6/469 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K F G RL+RLRE+ GLTQ ALAR L +S SY+NQ+E +QRP+TV VLL + F + Sbjct: 3 KAFMGMRLQRLREERGLTQAALARTLEISPSYLNQMERNQRPLTVPVLLRINAAFGVDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPA----TPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 F+ D +ARL++DLRE +E T ++I+ L A MP +G L+ LHRR AT L Sbjct: 63 LFSEDEEARLIADLRETLSESGTGDTITLSEIKGLAADMPMIGHALITLHRRARGATERL 122 Query: 119 EALHSR--ATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDA 176 EA+ + A+ V+ PMP+EEVRDFFYDR N++ ELD AAE +F L +G +D Sbjct: 123 EAMAASLGVPAESLGVAPPPMPYEEVRDFFYDRHNHVAELDEAAERLFLDADLGIGAMDI 182 Query: 177 QLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 L RLL D G VV+ + N R F + + LYL+R L GQRAFQ+ATQ+A L Sbjct: 183 SLERLLRDRHGIRVVIQGRDDMAGNEHRRFDGDQRVLYLSRALEAGQRAFQMATQLAFLD 242 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 + L+ ++ S EAR +ARIGLANY+AGAL+LPY FL AA RYD+D L F Sbjct: 243 HSALLDALVGSPRLASAEARALARIGLANYYAGALILPYGEFLSAAERLRYDVDLLGEMF 302 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 VG ETICHRLSTLQR ARGVPF F+R D AGNISKRQSAT FHFSRVGG CPLW ++ Sbjct: 303 GVGVETICHRLSTLQRSGARGVPFFFIRVDRAGNISKRQSATDFHFSRVGGTCPLWNVYA 362 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 AFA PGR LTQ+AQMPD RTY W+ART + PGK+FAIGLGCDL HAD+L+Y+ Sbjct: 363 AFASPGRVLTQIAQMPDGRTYLWVARTVCHNRGGFGVPGKTFAIGLGCDLRHADRLVYAR 422 Query: 417 GVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G++L+D CK+C+RP+CPQRAFP LG+ + VD S PY Sbjct: 423 GLNLSDASTATPIGAGCKVCERPACPQRAFPPLGKGLIVDERRSLFEPY 471 >tr|A5VFR3|A5VFR3_SPHWW Tax_Id=392499 SubName: Full=Transcriptional regulator, XRE family;[Sphingomonas wittichii] Length = 490 Score = 476 bits (1225), Expect = e-132 Identities = 247/468 (52%), Positives = 319/468 (68%), Gaps = 6/468 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K + G RL+RLRE+ L QV LA ALG+S+SY+NQLE +QRP+TV VLL + F + Sbjct: 27 KAYMGVRLKRLREERNLKQVELANALGISSSYLNQLEQNQRPLTVPVLLKINAAFGIDVQ 86 Query: 63 YFAPDSDARLVSDLREVFAEGPATP--AQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 F+ D +ARL+++LR+ AEG + A+I EL MPAVG+TLV+LHRR ++ EA Sbjct: 87 LFSEDEEARLITELRDALAEGSESVSIAEIRELAMNMPAVGRTLVSLHRRYRESVERGEA 146 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 + ++ D A MPFE+VRDFFY R N++ LD AAE ++ + L + L Sbjct: 147 MAAQLGDDWIAGGPARMPFEQVRDFFYARHNHVEPLDEAAERLYRQANLGPRSVHQGLVA 206 Query: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 L + G +V D+G +++R + P + L+L+ L +GQ+AFQ+ATQ+A L D+ Sbjct: 207 WLRERHGVQIVWDEGG----DAQRHYDPVRRILHLSADLRQGQQAFQMATQLAFLELGDV 262 Query: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 I + DEAR +AR+GLANYFAGAL+LPY FL AA + YDI +L RRF VGF Sbjct: 263 IGRLSDSSILTGDEARRLARVGLANYFAGALILPYGDFLAAAEAEGYDIAKLGRRFGVGF 322 Query: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 ETICHRLSTLQRP ARGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW +++AFA+ Sbjct: 323 ETICHRLSTLQRPEARGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNVYEAFAQ 382 Query: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 PGR LTQ+AQMPD R+Y WIART + Y PGKSFA+GLGCD+ HA +L+YS G+DL Sbjct: 383 PGRLLTQIAQMPDGRSYLWIARTVDRGSAGYGMPGKSFAVGLGCDIRHAGRLVYSRGLDL 442 Query: 421 TDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 TD CK+C+RP+CPQRAFP +GRPV +D + S PYP A Sbjct: 443 TDPAAATPIGAGCKVCERPACPQRAFPPIGRPVAIDENRSAPTPYPVA 490 >tr|A1WR95|A1WR95_VEREI Tax_Id=391735 SubName: Full=Transcriptional regulator, XRE family;[Verminephrobacter eiseniae] Length = 524 Score = 470 bits (1210), Expect = e-130 Identities = 249/473 (52%), Positives = 317/473 (67%), Gaps = 15/473 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLRRLRE+ G+ Q ALA AL LS SY+NQLE +QRP+TV+VLL + F L Sbjct: 31 KTFIGVRLRRLREERGMNQAALAHALELSPSYLNQLEQNQRPLTVAVLLKINRMFGLDVQ 90 Query: 63 YFAPDSDARLVSDLREVFAEGPATP----AQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 F+ D +ARL+SDLREV A A A++ EL A MPAV +TL+ +H R +A A + Sbjct: 91 MFSDDDEARLISDLREVLAHAAAPDTVSLAEVRELAAGMPAVARTLIRMHGRQREALARI 150 Query: 119 EALHSRATADVSAVSG-QPMPFEEVRDFFYDRKNYIGELDIAAEEMF----GRHGLRLGG 173 E + R + S + G PMP+EEVRDFF R+N+IGELD AAE M G + G Sbjct: 151 EDMALRLGDERSGLPGIPPMPYEEVRDFFTARQNHIGELDEAAERMAAEWAGSESVAQG- 209 Query: 174 LDAQLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIA 233 L R L VV D S +R + P+ + L L+ L+ GQ AFQ+ATQ+A Sbjct: 210 ----LERRLQQRHAVRVVQTDPDS-GDTVQRCYDPQRRLLQLSASLDAGQAAFQMATQLA 264 Query: 234 LLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLA 293 L +D++ + A D + AR +ARIGLANYFAGALLLPY FL+AA + RYDID+L Sbjct: 265 FLEMSDMLHRLSASADLSCEPARALARIGLANYFAGALLLPYTRFLEAAEAWRYDIDRLG 324 Query: 294 RRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWV 353 RRF VGFET+CHRLSTLQRP+AR VPF FVR D AGNISKRQSAT FHFSR GG CPLW Sbjct: 325 RRFGVGFETVCHRLSTLQRPSARAVPFFFVRVDRAGNISKRQSATHFHFSRAGGTCPLWN 384 Query: 354 IHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLI 413 +++AFA+PGR LTQ+A+MPD R Y W+AR+ ++ Y PGK+FAIGLGCD+ HA +L+ Sbjct: 385 VYEAFAQPGRILTQLARMPDGRAYLWVARSVSSAQEGYGQPGKTFAIGLGCDIQHAPRLV 444 Query: 414 YSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 Y+ G+DL D + CK+C+R +CPQRAFP++GR + +D + T PYP Sbjct: 445 YAKGLDLKDPQVPTPIGMGCKVCEREACPQRAFPFIGRQIDIDENRRTLTPYP 497 >tr|B6IXX7|B6IXX7_RHOCS Tax_Id=414684 SubName: Full=Putative uncharacterized protein;[Rhodospirillum centenum] Length = 484 Score = 459 bits (1181), Expect = e-127 Identities = 248/469 (52%), Positives = 307/469 (65%), Gaps = 8/469 (1%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 V K F G RLRRLRE+ GLTQ ALARAL LS SY+NQLE + RP+TV VLL + F + Sbjct: 20 VRKQFVGVRLRRLREERGLTQAALARALELSPSYLNQLEQNLRPLTVPVLLRINAVFGVD 79 Query: 61 THYFAPDSDARLVSDLREVFAEGPATP----AQIEELVARMPAVGQTLVNLHRRLYDATA 116 F+ D +ARL++DLRE +E A++ EL A MPAVG+ L+ LHRR +A Sbjct: 80 VQMFSEDDEARLIADLREALSEAGLADGVALAELRELAAGMPAVGRALLALHRRGREAAG 139 Query: 117 ELEALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDA 176 LE L + MPFEEVRDFFY R N++ ELD A E + GL G + A Sbjct: 140 RLEQLSGHLGEGWQDAAKPLMPFEEVRDFFYARHNHVAELDEAGEALQREAGLVAGDMAA 199 Query: 177 QLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 LAR L V L DG++ P R + S+TL L+ L GQRAFQ+ATQ+A L Sbjct: 200 GLARHLARRHDVRV-LADGEAAVP---RRYDAASRTLRLSADLTPGQRAFQMATQLAFLD 255 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 + ++ G+IA D +EAR +ARIGLA+YFAGA+LLPYRPFL AA + RYDI++L R+F Sbjct: 256 RGAMLDGLIAQADFSGEEARRLARIGLASYFAGAVLLPYRPFLAAAEALRYDIERLERQF 315 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 VGFET+CHRLSTLQRP RGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW +++ Sbjct: 316 GVGFETVCHRLSTLQRPGERGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNVYE 375 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 AFA+PGR L Q A MPD R Y W+ART + P + FA+GLGCDL HA +L+Y+ Sbjct: 376 AFAQPGRILIQRAAMPDGRQYLWLARTVGRGAGGFGAPARQFAVGLGCDLRHAARLVYAK 435 Query: 417 GVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+DL D E CK+C+R C QRAFP +GRP++VD PY Sbjct: 436 GLDLADPEAATPIGAGCKVCERADCAQRAFPMIGRPLQVDEAVRRFAPY 484 >tr|C7MW49|C7MW49_SACVD Tax_Id=471857 SubName: Full=Predicted transcriptional regulator;[Saccharomonospora viridis] Length = 475 Score = 456 bits (1174), Expect = e-126 Identities = 233/474 (49%), Positives = 308/474 (64%), Gaps = 5/474 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTFAGARLR LRE ++Q LAR L +S SY+NQ+E++ RP+TV VLL + E F + Sbjct: 3 KTFAGARLRHLRESRSMSQAELARLLEISPSYLNQIEHNTRPLTVPVLLRITEAFGVDAE 62 Query: 63 YFAPDSDARLVSDLREVFAE----GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA + +RLV+D+RE + +P +I +L +P+V Q LV LHR +A Sbjct: 63 FFANNDTSRLVADVREALLDESVNADVSPGEINDLAKNLPSVAQALVKLHRNYRNAIEAT 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 AL + P+P EEVRDFFY+R+NY+ ELD AE+M+ GLR + L Sbjct: 123 AALVTEDGRGTHGSPAAPLPHEEVRDFFYERENYVAELDERAEKMYEELGLRRDEIRNGL 182 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 L ++ G TV + G +L + ++P++K L LA L GQ+AF++A+QIALL Sbjct: 183 RDRLAEHYGVTVTTE-GLNLAAGEQHRYEPDAKVLRLAPTLRIGQQAFRMASQIALLEYD 241 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLIT + AR +AR+GLANYFAGAL+LPY+ FL AA RYDI+ L F V Sbjct: 242 DLITELADSWAFSGPPARSLARVGLANYFAGALILPYKAFLSAAERFRYDIELLCEHFGV 301 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 GFET+CHRLSTLQRP RG+PF FVR D AGN+SKRQSA FHFSRVGG CPLWVI++AF Sbjct: 302 GFETVCHRLSTLQRPKMRGIPFSFVRVDRAGNMSKRQSAAGFHFSRVGGACPLWVIYEAF 361 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 RPG+ L QV +PD ++YFWIART + Y PGK F++GLGC+L HA +L+YS G+ Sbjct: 362 TRPGKILPQVVTLPDGKSYFWIARTVSRNIGGYGSPGKMFSVGLGCELRHAHRLVYSAGL 421 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPAISTE 472 +L D CK+C+RP+CPQRAFP +G+ + VD +TST +PYP T+ Sbjct: 422 NLDDKSAATPIGMGCKVCERPACPQRAFPTIGKELTVDENTSTFVPYPAVPKTD 475 >tr|Q1N883|Q1N883_9SPHN Tax_Id=314266 SubName: Full=Transcriptional Regulator, XRE family protein;[Sphingomonas sp. SKA58] Length = 461 Score = 456 bits (1172), Expect = e-126 Identities = 239/466 (51%), Positives = 316/466 (67%), Gaps = 10/466 (2%) Query: 7 GARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTHYFAP 66 G RLRRLRE+ L QV LA ALG+S+SY+NQLE +QRP+TV VLL + F + F+ Sbjct: 2 GVRLRRLREERKLKQVDLANALGISSSYLNQLEQNQRPLTVPVLLKINAVFGVDVQLFSE 61 Query: 67 DSDARLVSDLREVFAEGPA--TPAQIEELVARMPAVGQTLVNLHRRLYDATAELEALHSR 124 D +ARL+++LR+ ++ + A+I EL MPAVG+TL++LHRR +A EA+ ++ Sbjct: 62 DEEARLITELRDALSDSAEAISVAEIRELATNMPAVGRTLISLHRRYREAAERSEAMAAQ 121 Query: 125 ATADVSAVSGQP--MPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLARLL 182 D +SG P M FE+VRDFFY R N++ LD AAE ++ GL + L L Sbjct: 122 LGDDW--ISGGPARMAFEQVRDFFYARHNHVKPLDEAAERIYREAGLAPHSVHPGLVAWL 179 Query: 183 GDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADLIT 242 D +V + + ++R + P ++TL+++ L++GQ+AFQ+ATQ+A L +I Sbjct: 180 KDRHDVQIVWGESDT----AQRRYDPATRTLHVSAHLHQGQQAFQMATQLAFLELGSVID 235 Query: 243 GIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGFET 302 + DEAR +AR+GLANYFAGAL+LPY FL AA + YDI++L RRF VGFET Sbjct: 236 RLADNSLLSGDEARRLARVGLANYFAGALILPYGDFLAAAEAEAYDIEKLGRRFGVGFET 295 Query: 303 ICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFARPG 362 ICHRLSTLQR ARG+PF FVR D AGNISKRQSAT FHFSRVGG+CPLW +++AF +PG Sbjct: 296 ICHRLSTLQRAEARGIPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWKVYEAFTQPG 355 Query: 363 RFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDLTD 422 R L Q+AQMPD RTY WIART ++ + + PGK+FA+GLGCD+ HA +LIYS G+DL D Sbjct: 356 RVLRQIAQMPDGRTYLWIARTVSSGNAGFDVPGKTFAVGLGCDIRHASRLIYSRGLDLDD 415 Query: 423 TEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 CK+C+RP+CPQRAFP +GR V VD + ST PYP A Sbjct: 416 PAAATPIGAGCKVCERPACPQRAFPAIGRAVAVDENRSTLAPYPAA 461 >tr|C9CWQ0|C9CWQ0_9RHOB Tax_Id=644076 SubName: Full=DNA-binding protein;[Silicibacter sp. TrichCH4B] Length = 461 Score = 454 bits (1168), Expect = e-125 Identities = 234/465 (50%), Positives = 306/465 (65%), Gaps = 11/465 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K + G RLRRLRE+ G+TQ ALAR L LS SY+NQ+E +QRP+TV VLL L F L Sbjct: 3 KAYMGVRLRRLREERGMTQAALARTLELSPSYLNQMERNQRPLTVPVLLRLNAVFGLDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAE--GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 F+ +ARL+ DLR A+ A+ A++ E+ A MP + Q ++++ RL D + +++ Sbjct: 63 LFSEAEEARLIPDLRAALADQGAAASLAEVREIAANMPGIAQAIISMQNRLRDTSEQVDL 122 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 + R + + A +P PFE VRD+FY +NYI LD A E + G+R G + L+ Sbjct: 123 MAGRLSGETGA---EPAPFEAVRDYFYHNRNYIAALDEAGEAL--GQGIRAGRMAEGLSE 177 Query: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 L G V +DD S + R F + L+L+ L GQRAFQ+ATQ+A L Q D+ Sbjct: 178 RLAGRHGIRVSMDDDAS----ALRRFDDSAGVLHLSSRLTPGQRAFQMATQLAFLEQGDV 233 Query: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 I + ++AR + RIGLANYFAGA++LPYR FL+AA S YDI++LA RF VGF Sbjct: 234 IAQLADDAGLAGEDARTLLRIGLANYFAGAVILPYRSFLEAAESEGYDIERLAHRFGVGF 293 Query: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 ET CHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFSR+GG+CPLW +++AF+R Sbjct: 294 ETTCHRLSTLQRPEARGVPFFFIRVDRAGNISKRQSATDFHFSRIGGSCPLWNVYEAFSR 353 Query: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 PG LTQVAQMPD R+Y WIART + + P K FA+ LGCDLAHA++L+Y+ GVDL Sbjct: 354 PGEVLTQVAQMPDGRSYLWIARTVSHGTGGFGAPVKRFAVALGCDLAHAERLVYARGVDL 413 Query: 421 TDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 + + CK+CDRP+CPQRAFP GRP R D ++ PY Sbjct: 414 RNPDLATPIGAGCKVCDRPACPQRAFPMSGRPARTDADRTSFAPY 458 >tr|Q07LS5|Q07LS5_RHOP5 Tax_Id=316055 SubName: Full=Transcriptional regulator, XRE family;[Rhodopseudomonas palustris] Length = 472 Score = 452 bits (1162), Expect = e-125 Identities = 248/470 (52%), Positives = 308/470 (65%), Gaps = 11/470 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RL+RLRE LTQ ALA LG+S SY+NQLEN+QRP+T+ V LAL F L Sbjct: 3 KTFLGVRLKRLREQQRLTQAALAAKLGISLSYLNQLENNQRPLTLPVALALNATFGLDIQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPA-----TPAQIEELVARMPAVGQTLVNLHRRLYDATAE 117 F+ D +ARL++DLRE A+ PA A + EL MPA+G+TLV L +R A + Sbjct: 63 SFSDDDEARLIADLREAVAD-PALVETIATADLRELALNMPAIGRTLVALSQRYRQAIEQ 121 Query: 118 LEALHSRATADVSAVSG--QPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLD 175 AL +R D A S PFEEVRDFFY NYI ELD AAE + R L+ G + Sbjct: 122 SAALSARLGEDRQAASAILPSTPFEEVRDFFYAHHNYISELDEAAEAIALRMNLQPGRMA 181 Query: 176 AQLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALL 235 L LL + G T+++D S +R F +S+T+ L+ L+ GQ+AFQLATQIA L Sbjct: 182 PALTSLLEGDRGITILIDG--STESGLQREFDRQSRTVRLSSSLSPGQQAFQLATQIAFL 239 Query: 236 TQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARR 295 D I I++ SDE+RG+ARIGLA+YFAGAL+LPY FL A RYDI+ L Sbjct: 240 DFDDAIRSIVSNAAFTSDESRGLARIGLAHYFAGALVLPYSAFLQEAQRRRYDIELLGHT 299 Query: 296 FEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIH 355 F VGFET+CHRLSTLQR NARGVPF FVR D AGNISKRQSAT FHFSRVGG CPLW ++ Sbjct: 300 FGVGFETVCHRLSTLQRHNARGVPFFFVRVDRAGNISKRQSATDFHFSRVGGTCPLWNVY 359 Query: 356 QAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYS 415 +AFA PGR LTQ+A+MPDERTY WIART + + P K+FA+ LGCD+ HA ++YS Sbjct: 360 EAFACPGRILTQLARMPDERTYLWIARTVSHSQGGHRAPAKTFAVALGCDVRHAGSVVYS 419 Query: 416 VGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+D+ D CK+C+RP+CPQRAFP +G+ + VD + PY Sbjct: 420 EGLDI-DPAVATPIGMGCKVCERPNCPQRAFPPIGQALHVDETRAHFAPY 468 >tr|Q210Y2|Q210Y2_RHOPB Tax_Id=316056 SubName: Full=Transcriptional regulator, XRE family;[Rhodopseudomonas palustris] Length = 471 Score = 447 bits (1149), Expect = e-123 Identities = 246/470 (52%), Positives = 308/470 (65%), Gaps = 12/470 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RL+RLRE+H LTQ ALA LG+S SY+NQLEN+QRP+T+ V LAL + F L Sbjct: 3 KTFLGVRLKRLREEHRLTQAALAAKLGISLSYLNQLENNQRPLTLPVALALNKTFGLDIQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPA-----TPAQIEELVARMPAVGQTLVNLHRRLYDATAE 117 F+ D +ARL++DLRE A+ PA + + EL MPA+G+TLV L +R A + Sbjct: 63 SFSEDDEARLIADLREAVAD-PALGETIATSDLRELALNMPAIGRTLVALSQRYRQAIEQ 121 Query: 118 LEALHSRATADVSAVSG--QPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLD 175 AL +R D A S PFEEVRDFFY + NYI ELD AAE + R L G + Sbjct: 122 SAALSARLGEDRQAASAILPSTPFEEVRDFFYAQHNYIPELDEAAEAIALRMNLPPGRMA 181 Query: 176 AQLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALL 235 L+ L D G T+++ G S +R F +++T+ L+ L+ GQ+AFQLAT IA L Sbjct: 182 PALSSFLEDR-GMTILI--GGSTESGLQREFDRQTRTVRLSSSLHPGQQAFQLATHIAFL 238 Query: 236 TQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARR 295 D I I++ SDE+RG+ARIGLA+YFAGAL+LPY FL A RYDI+ L Sbjct: 239 DFDDAIRSIVSNAAFTSDESRGLARIGLAHYFAGALVLPYSAFLQEAQRRRYDIELLGHT 298 Query: 296 FEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIH 355 F VGFET CHRLSTLQR NARGVPF F+R D AGNISKRQSAT FHFSRVGG CPLW ++ Sbjct: 299 FGVGFETACHRLSTLQRHNARGVPFFFIRVDRAGNISKRQSATDFHFSRVGGTCPLWNVY 358 Query: 356 QAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYS 415 +AFA PGR LTQ+A+MPD RTY WIART + Y PGK+FA+ LGCD+ HA ++YS Sbjct: 359 EAFACPGRILTQLARMPDGRTYLWIARTVSHSQGGYRAPGKTFAVALGCDVRHAGSVVYS 418 Query: 416 VGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+D+ D CK+C+RP+CPQRAFP +G + VD + PY Sbjct: 419 EGLDI-DPAIATPIGMGCKVCERPNCPQRAFPPIGHALNVDETRAHFAPY 467 >tr|B3QGB8|B3QGB8_RHOPT Tax_Id=395960 SubName: Full=Transcriptional regulator, XRE family;[Rhodopseudomonas palustris] Length = 474 Score = 443 bits (1139), Expect = e-122 Identities = 236/470 (50%), Positives = 307/470 (65%), Gaps = 8/470 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K + GARLRRLRE G+TQ ALA A+G+S SY+NQ+EN+QRP+TV VLL L + Sbjct: 3 KAYVGARLRRLREQRGMTQQALATAVGVSPSYLNQIENNQRPLTVPVLLKLNATLGIDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPA----TPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 F+ D +ARL++DL+EV ++ T + ELV MPA G+ LV ++RR + A + Sbjct: 63 LFSEDDEARLIADLKEVLSDPMVGESLTANDVRELVTSMPAAGRALVAIYRRYHLALEQS 122 Query: 119 EALHSRATADVS--AVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDA 176 AL +R D S PFEEVRDFFY R NYI ELD AAE G + + A Sbjct: 123 AALAARLGDDRQDRPTSAMSTPFEEVRDFFYARHNYIAELDEAAERTAAGTGRTIQQVAA 182 Query: 177 QLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 LA L + G V + + + + +R F KTL L+ L GQ+AFQ+ TQ+A L Sbjct: 183 SLAERLKSHHGIDVRVGETGDASADLQRNFDSGDKTLRLSARLQPGQQAFQIGTQLAFLE 242 Query: 237 QADLITGIIAGDDQLSDEA-RGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARR 295 D I ++ G++ DEA R +ARIGLANYFAGALLLPY F + A S RYDI + + Sbjct: 243 HRDTIDALV-GENPFGDEASRRLARIGLANYFAGALLLPYAGFREKAESVRYDITLIGQH 301 Query: 296 FEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIH 355 F VG+ET+CHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFSR GG CPLW ++ Sbjct: 302 FGVGYETVCHRLSTLQRPGARGVPFFFIRVDRAGNISKRQSATDFHFSRGGGTCPLWNVY 361 Query: 356 QAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYS 415 +AF++P R LTQ+A+MPD RTY W+ART + + + Y P K+FA+ LGCDL HA +L+YS Sbjct: 362 EAFSQPDRILTQLARMPDHRTYLWVARTVSHDQAGYHAPRKTFAVALGCDLQHAGRLVYS 421 Query: 416 VGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+DLT+ C+IC+R +CPQRAFP +GRP+ VD + ++ PY Sbjct: 422 DGLDLTNPAAATPIGAGCRICERQACPQRAFPPVGRPLHVDENRNSFSPY 471 >tr|C6QII4|C6QII4_9RHIZ Tax_Id=582899 SubName: Full=Transcriptional regulator, XRE family;[Hyphomicrobium denitrificans ATCC 51888] Length = 472 Score = 442 bits (1137), Expect = e-122 Identities = 237/474 (50%), Positives = 315/474 (66%), Gaps = 12/474 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K F G RL+RLRE+ GLTQVALARAL LS SY+NQ+E +QRP+TV +LL + F + Sbjct: 3 KAFMGVRLKRLREERGLTQVALARALELSPSYLNQIEKNQRPLTVPILLKINSVFGVDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 F+ D +ARL++DL++V A+ +I E+ A MPAVG+ +V L R A+ Sbjct: 63 LFSEDEEARLIADLKDVLADPGLGEHVALTEIREIAANMPAVGRAIVALQARSRQASERA 122 Query: 119 EALHSRATADVSAVSGQP---MPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLD 175 +A+ SR +SA +P MP+E+VRD+FY NYI ELD AAE +F + L +G + Sbjct: 123 DAMASRF--GLSAEEIEPATLMPYEKVRDYFYAHHNYIAELDEAAEALFDKAQLVIGDVA 180 Query: 176 AQLARLLGDNLGTTVVLDDG-QSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIAL 234 L L G +V+ +L+P +R F +TL L+ LN GQ+AF++ATQ+A Sbjct: 181 TGLREYLRSEHGVDIVIVPATDTLSP--QRRFNRARRTLELSANLNPGQQAFEMATQLAF 238 Query: 235 LTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLAR 294 L D + + SDE +ARIGLAN+FAGAL++PY PFL+AA + RYDID L + Sbjct: 239 LDIGDTLDRLAKDAADDSDETFRLARIGLANHFAGALVMPYTPFLEAAEALRYDIDLLGQ 298 Query: 295 RFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVI 354 RF VGFET+CHRLSTLQR +RGVPF FVR D AGNISKRQSAT FHFSRVGG+CPLW + Sbjct: 299 RFGVGFETVCHRLSTLQRSESRGVPFFFVRVDRAGNISKRQSATDFHFSRVGGSCPLWNV 358 Query: 355 HQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIY 414 ++AF+ PGR LTQ+AQMPD RTY W+ART + + P K+FAIGLGCDL+HA++L+Y Sbjct: 359 YEAFSTPGRILTQLAQMPDGRTYLWVARTVSRGHGGFGAPVKTFAIGLGCDLSHANRLVY 418 Query: 415 SVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 + G++L ++ CK+C+RP+CPQRAFP +G VD + PYP A Sbjct: 419 AKGLNLANSGVAVPIGVGCKVCERPNCPQRAFPPIGGRTAVDENERRFTPYPVA 472 >tr|A1B1R0|A1B1R0_PARDP Tax_Id=318586 SubName: Full=Transcriptional regulator, XRE family;[Paracoccus denitrificans] Length = 461 Score = 441 bits (1134), Expect = e-121 Identities = 231/468 (49%), Positives = 307/468 (65%), Gaps = 13/468 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 K+F G RLRRLRE+ G+TQ ALARALG+S SY+NQ+E +QRP+TV VLL L F L Sbjct: 3 KSFMGVRLRRLREERGMTQAALARALGISPSYLNQIEQNQRPLTVPVLLRLNGAFGLDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAE--GPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 F+ +ARL++DLR A+ PA A++ EL + MP + + +V + RL + + Sbjct: 63 LFSDAEEARLITDLRAALADQGAPAATAELRELASNMPGIARAIVAMQARLRETAERADL 122 Query: 121 LHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLAR 180 L R T +A + P FE VRD+FYDR+N++ EL+ +AE + L G + A L Sbjct: 123 LAGRLTEPQAAAT--PAAFEAVRDWFYDRRNHVPELETSAEAIGS--ALPPGRMAAGLVD 178 Query: 181 LLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQADL 240 L G + LD +S R F ++ L+LA LN GQ+AFQ+ATQ+A L Q + Sbjct: 179 RLAGRHGIRIALD------ADSLRRFDSGARILHLAPHLNEGQQAFQIATQLAFLEQGET 232 Query: 241 ITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVGF 300 I + + D L+ +A+ + RIGLANYFAGAL+LPY FL A + YDID ++RRF VGF Sbjct: 233 IARL-SDDPDLASDAQALLRIGLANYFAGALILPYGAFLQEAEAVAYDIDLISRRFGVGF 291 Query: 301 ETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFAR 360 ET CHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFSR+GG+CPLW +++AF+R Sbjct: 292 ETACHRLSTLQRPEARGVPFFFIRVDRAGNISKRQSATDFHFSRIGGSCPLWNVYEAFSR 351 Query: 361 PGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVDL 420 PG + Q+AQMPD R+Y WIAR + + P K+FA+ LGCDLAHAD+L+Y+ G+DL Sbjct: 352 PGEIVRQIAQMPDGRSYLWIARVVSHGRGGFGAPVKTFAVALGCDLAHADRLVYARGLDL 411 Query: 421 TDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 + E CK+C+RP+CPQRAFP +GRP+ V + PY A Sbjct: 412 KNPELATRIGPGCKVCERPACPQRAFPMVGRPLAVSIAEARFAPYSAA 459 >tr|A9C129|A9C129_DELAS Tax_Id=398578 SubName: Full=Transcriptional regulator, XRE family;[Delftia acidovorans] Length = 470 Score = 437 bits (1123), Expect = e-120 Identities = 236/468 (50%), Positives = 307/468 (65%), Gaps = 9/468 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G +LR+LR +HGL+Q+ALA ALGLS SY+NQLE +QRP+TVSVLL L + Sbjct: 3 KTFMGVKLRKLRAEHGLSQIALAHALGLSPSYLNQLEQNQRPLTVSVLLKLNRALGVDIQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGPATPA--QIEELVARMPAVGQTLVNLHRRLYDATAELEA 120 F+ D +ARLV+ LRE AE P + A +++E+ A+MPA+G+ ++ LHRR +A +E+ Sbjct: 63 QFSEDEEARLVAGLREALAESPESIALPELQEVAAQMPALGRAVMALHRRHLEALERIES 122 Query: 121 LHSRATADVSAVS-GQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLA 179 + R D S + + MPFE VRDFF+ +NY E+D AA+ + G G L L Sbjct: 123 MALRLGDDRSDMPVARTMPFEAVRDFFFAHQNYFDEVDRAAQALAGEARADPGHLADWLV 182 Query: 180 RLLGDNLGTTVV-LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 R L G V L+D + S+R F P +++L+L+ L Q+AFQL TQ+ALL Sbjct: 183 RRLQQRHGVQVHRLEDSRQ----SQRRFDPATRSLWLSSALEPAQQAFQLGTQLALLEMG 238 Query: 239 DLITGIIAGDDQLSDEAR-GVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFE 297 D + +IA D A +AR+GLANYFAGALLLPY FL+AA RYDID L +RF Sbjct: 239 DTLDRLIATAAFQGDPASCKLARVGLANYFAGALLLPYDLFLEAAEQLRYDIDLLGQRFG 298 Query: 298 VGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQA 357 VGFET+CHRLSTLQRP A GVPF FVR D AGNISKRQSAT FHFSR GG CPLW +++A Sbjct: 299 VGFETVCHRLSTLQRPGAPGVPFFFVRVDRAGNISKRQSATHFHFSRTGGTCPLWTVYEA 358 Query: 358 FARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVG 417 F +P + L Q+A MPD R Y WIAR+ + Y P K+F+IGLGCD+ HA +L+Y+ G Sbjct: 359 FGQPDQVLRQLASMPDGRRYLWIARSVSHGQRGYGSPRKTFSIGLGCDIRHAARLVYAKG 418 Query: 418 VDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 +DL D E CK+C+R C QRAFPY+G+ + VD + S PY Sbjct: 419 LDLGDPESATPIGMGCKVCERDQCTQRAFPYVGKALHVDENASRFAPY 466 >tr|B9MAT1|B9MAT1_DIAST Tax_Id=535289 SubName: Full=Transcriptional regulator, XRE family;[Diaphorobacter sp.] Length = 490 Score = 436 bits (1122), Expect = e-120 Identities = 235/479 (49%), Positives = 306/479 (63%), Gaps = 16/479 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLRRLRE+ GLTQVALARAL +S SY+NQ+E +QRP+TV VLL + F + Sbjct: 3 KTFMGVRLRRLREERGLTQVALARALEISASYLNQIEQNQRPLTVPVLLKINAVFGVDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGP-------ATPAQIEELVARMPAVGQTLVNLHRRLYDAT 115 +F+ +ARL++ LR+V A+ P + A++ EL A MPAV + L+ LHR +A Sbjct: 63 HFSEGDEARLIAGLRDVLADLPPGAPADAVSLAEVRELAANMPAVARVLLALHRGRAEAR 122 Query: 116 AELEALHSRATAD----VSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRL 171 LEAL + + VS PM +EEVRDFF+ R N+I ELD AAE + + L Sbjct: 123 ERLEALAAHYGDERGGAVSTAQTPPMAYEEVRDFFFARHNHIAELDDAAEHLAAQWRLVP 182 Query: 172 GGLDAQLARLLGDNLGTTVVL---DDGQSLNPNS--KRMFQPESKTLYLARWLNRGQRAF 226 G A L L G V L DG + +R F ++ LYL+ L QRAF Sbjct: 183 GAAGAALQARLEQAHGVRVALLQGGDGDEAGEGAAVQRRFDAAARVLYLSPTLQGAQRAF 242 Query: 227 QLATQIALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTR 286 Q+ATQ+A L L+ + G + AR +ARIGLANYFAGALLLPY FL A + Sbjct: 243 QMATQLAFLEVPHLLQHSVQGAALSGEAARTLARIGLANYFAGALLLPYGAFLRTAEALH 302 Query: 287 YDIDQLARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVG 346 YDI++L + + VGFET+CHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFS++G Sbjct: 303 YDIERLGQHWGVGFETVCHRLSTLQRPGARGVPFFFIRVDRAGNISKRQSATHFHFSKIG 362 Query: 347 GNCPLWVIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDL 406 G CPLW +++AFA+PGR + Q+A+MPD R Y WIART T + PGK+F++ LGCD+ Sbjct: 363 GTCPLWNVYEAFAQPGRIVRQLARMPDGRVYLWIARTVTRSTGGWGAPGKTFSVALGCDV 422 Query: 407 AHADKLIYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 HA +L+Y+ G+DL D E CK+C+R +CPQRAFP +GRP+ V+ + PY Sbjct: 423 QHAGQLVYARGLDLADPEAPVPIGMGCKVCERTACPQRAFPPVGRPLEVNEDMAGFTPY 481 >tr|C6WFM0|C6WFM0_ACTMD Tax_Id=446462 SubName: Full=Transcriptional regulator, XRE family;[Actinosynnema mirum] Length = 471 Score = 436 bits (1121), Expect = e-120 Identities = 225/467 (48%), Positives = 294/467 (62%), Gaps = 8/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 +TF GARLRRLRE+ GLTQV LARALG+S SY+NQ+E+D RP+TV VLL L E F + Sbjct: 3 RTFVGARLRRLREERGLTQVELARALGISASYLNQIEHDSRPLTVPVLLRLTESFGVDAS 62 Query: 63 YFAPDSDARLVSDLREVFAEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAELEALH 122 +FA ARL ++L+E + +P + E+ P + + +++LHRR A +L A+ Sbjct: 63 FFATHDSARLFAELQEALSGADVSPGDLREVATSRPELARAVIDLHRRYRQADEQLTAVA 122 Query: 123 SRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQLARLL 182 + ++ + E VRDFFY N+ ELD AAE + GR G+R G + LA L Sbjct: 123 GDRSGELVVGA-----HERVRDFFYTHANHFAELDTAAEHVAGRTGVRPGETRSALAARL 177 Query: 183 GDNLGTTVVLDDGQSLNPNSK---RMFQPESKTLYLARWLNRGQRAFQLATQIALLTQAD 239 D G V G+ N NS + P ++ L L+ L GQ+AF++ATQIALL D Sbjct: 178 ADRHGVRVQGIAGELANHNSAGELHHYDPVNRVLRLSGNLRPGQQAFRMATQIALLEFGD 237 Query: 240 LITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEVG 299 + I+ + R + RIGLA Y A ALLLPYR F ++A RYDI+ LA F + Sbjct: 238 ELDAIVQESREPEGPVRSLIRIGLARYAAAALLLPYRSFHESAEELRYDIELLADHFALS 297 Query: 300 FETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAFA 359 FETICHRL+TLQRP RG+PF FVR D AGN+SKRQSAT FHFSR GG CPLW ++ AF+ Sbjct: 298 FETICHRLTTLQRPGERGIPFSFVRVDRAGNVSKRQSATGFHFSRAGGTCPLWSVYGAFS 357 Query: 360 RPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGVD 419 PGR +TQVA MPD + Y W+ART + Y PGK +A+GLGC++ HA +L+YS GVD Sbjct: 358 SPGRVVTQVAAMPDNQRYLWVARTVSRSRGGYASPGKIYAVGLGCEIRHASRLVYSTGVD 417 Query: 420 LTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYP 466 L D C+ CDRP CPQR+ P +GRP+RVD + ST +PYP Sbjct: 418 LEDASAATPIGPGCQTCDRPLCPQRSMPPVGRPLRVDANRSTFIPYP 464 >tr|A1W6F4|A1W6F4_ACISJ Tax_Id=232721 SubName: Full=Transcriptional regulator, XRE family;[Acidovorax sp.] Length = 490 Score = 436 bits (1120), Expect = e-120 Identities = 234/479 (48%), Positives = 305/479 (63%), Gaps = 16/479 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLRRLRE+ GLTQVALARAL +S SY+NQ+E +QRP+TV VLL + F + Sbjct: 3 KTFMGVRLRRLREERGLTQVALARALEISASYLNQIEQNQRPLTVPVLLKINAVFGVDVQ 62 Query: 63 YFAPDSDARLVSDLREVFAEGP-------ATPAQIEELVARMPAVGQTLVNLHRRLYDAT 115 +F+ +ARL++ LR+V A+ P + A++ EL A MPAV + L+ LHR +A Sbjct: 63 HFSEGDEARLIAGLRDVLADLPPGAPADAVSLAEVRELAANMPAVARVLLALHRGRAEAR 122 Query: 116 AELEALHSRATAD----VSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRL 171 LEAL + + S PM +EEVRDFF+ R N+I ELD AAE + + L Sbjct: 123 ERLEALAAHYGDERGGAASTAQTPPMAYEEVRDFFFARHNHIAELDDAAEHLAAQWRLAP 182 Query: 172 GGLDAQLARLLGDNLGTTVVL---DDGQSLNPNS--KRMFQPESKTLYLARWLNRGQRAF 226 G A L L G V L DG + +R F ++ LYL+ L QRAF Sbjct: 183 GAAGAALQARLEQAHGVRVALLQGGDGDEAGEGAAVQRRFDAAARVLYLSPTLQGAQRAF 242 Query: 227 QLATQIALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTR 286 Q+ATQ+A L L+ + G + AR +ARIGLANYFAGALLLPY FL A + Sbjct: 243 QMATQLAFLEVPHLLQHSVQGAALSGEAARTLARIGLANYFAGALLLPYGAFLRTAEALH 302 Query: 287 YDIDQLARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVG 346 YDI++L + + VGFET+CHRLSTLQRP ARGVPF F+R D AGNISKRQSAT FHFS++G Sbjct: 303 YDIERLGQHWGVGFETVCHRLSTLQRPGARGVPFFFIRVDRAGNISKRQSATHFHFSKIG 362 Query: 347 GNCPLWVIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDL 406 G CPLW +++AFA+PGR + Q+A+MPD R Y WIART T + PGK+F++ LGCD+ Sbjct: 363 GTCPLWNVYEAFAQPGRIVRQLARMPDGRVYLWIARTVTRSTGGWGAPGKTFSVALGCDV 422 Query: 407 AHADKLIYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 HA +L+Y+ G+DL D E CK+C+R +CPQRAFP +GRP+ V+ + PY Sbjct: 423 QHAGQLVYARGLDLADPEAPVPIGMGCKVCERTACPQRAFPPVGRPLEVNEDMAGFTPY 481 >tr|A0QQX1|A0QQX1_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding protein;[Mycobacterium smegmatis] Length = 478 Score = 429 bits (1102), Expect = e-118 Identities = 223/472 (47%), Positives = 310/472 (65%), Gaps = 12/472 (2%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 +PKTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 1 MPKTFVGSRVRQLRSERGFSQAALAQMLDISPSYLNQIEHDVRPLTVAVLLRITEVFGVD 60 Query: 61 THYFAPDSDARLVSDLREVFAEGPATPAQIE-----ELVARMPAVGQTLVNLHRRLYDAT 115 +F+P D RLV++LREV + + ++ ++VA P + + +VNLHRR AT Sbjct: 61 ATFFSPQDDTRLVAELREVTLDRDLGASDVDLTEVADMVASHPKLARAMVNLHRRYRLAT 120 Query: 116 AELEALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLD 175 +L A +D S MP EEVRD+FY+R+NY+ ELD AAE++ R + G L Sbjct: 121 TQLAAATEDRYSDGSGSGAITMPHEEVRDYFYERQNYLHELDTAAEDLTARMRMHSGDLA 180 Query: 176 AQLARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIA 233 A+L L G VV +D G+++ + P +KTL ++ ++RGQ+ F++A ++A Sbjct: 181 AELTNRLTSVHGVRVVRRIDMGETV----LHRYDPATKTLEMSNHISRGQQVFKMAAELA 236 Query: 234 LLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLA 293 L DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYDI++L+ Sbjct: 237 YLEFGDLIDKLVDEGRFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDIERLS 296 Query: 294 RRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWV 353 ++V +ETI HRLSTLQRP+ RGVPF FVR D AGN+SKRQSAT FHFS GG CPLW Sbjct: 297 AFYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWN 356 Query: 354 IHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLI 413 +++ FA PG+ L Q+AQMPD R Y W+ART RY PGK+FAIGLGC+L HA +L+ Sbjct: 357 VYETFAYPGKILVQIAQMPDGRHYMWVARTVERRAHRYGQPGKTFAIGLGCELRHAHRLV 416 Query: 414 YSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 YS G+DL+ C++C+R +CPQRAFP LG+ + +D H ST PY Sbjct: 417 YSEGLDLSG-NVSTPIGAGCRVCERDNCPQRAFPALGKALDLDEHRSTVSPY 467 >tr|B2HQT0|B2HQT0_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 474 Score = 426 bits (1094), Expect = e-117 Identities = 220/471 (46%), Positives = 305/471 (64%), Gaps = 12/471 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRNERGFSQAALAQLLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D RLV++LREV + P ++ E+V+ P++ + +VNLHRR TA+L Sbjct: 63 FFSSQDDTRLVAELREVTMDRDLDISVDPTEVAEMVSAHPSLARAMVNLHRRYRITTAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 A +D S MP EEVRD+FY R+NY+ ELD AAE++ + L G L ++L Sbjct: 123 AAATEERYSDGSGTGSITMPHEEVRDYFYQRQNYLHELDAAAEDLTIQMRLHHGDLRSEL 182 Query: 179 ARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 R L + G + +D G ++ F P +KTL ++ L GQ+ F++A ++A L Sbjct: 183 TRRLTEVHGVRITRRIDLGDTV----LHRFDPATKTLEISNHLASGQQVFKMAAELAYLE 238 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYD+++L+ + Sbjct: 239 FGDLIDAMVTDGKFTSDESRTLARLGLANYFAAAAVLPYRQFHDVAENFRYDVERLSAFY 298 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 V +ETI HRLSTLQRP+ RGVPF F+R D AGN+SKRQSAT FHFS GG CPLW +++ Sbjct: 299 SVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYE 358 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 FA PG+ L Q+AQMPD R Y W+ART +RY PGK+FAIGLGC+L HA +L+YS Sbjct: 359 TFANPGKILVQIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSE 418 Query: 417 GVDLTDTE--XXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+DL+ C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 GLDLSGDPNIAATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 469 >tr|B1MIH0|B1MIH0_MYCA9 Tax_Id=561007 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium abscessus] Length = 476 Score = 425 bits (1092), Expect = e-117 Identities = 221/469 (47%), Positives = 300/469 (63%), Gaps = 10/469 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KT+ G RLR+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTYVGGRLRQLRSERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D+RL+++LREV + PA+I ++VA PA+ + +VNLHRR T +L Sbjct: 63 FFSSQDDSRLIAELREVVQDKDLDIDVDPAEIADVVAGHPALARAMVNLHRRYRITTTQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 A D S MP EEVRD+FY R NY+ ELD AAE++ R + L ++ Sbjct: 123 AAATEDRYTDGSGSGSITMPHEEVRDYFYQRHNYLHELDTAAEDLTVRMRMHRADLAREI 182 Query: 179 ARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 A L + G + +D G S+ + P SKTL ++ L+ GQ+ F+LA ++A L Sbjct: 183 ADRLTEVHGVQIARRIDLGDSV----LHKYDPASKTLEISNHLSGGQQVFKLAAELAYLE 238 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 DLI ++ S+E+R +AR+GLANYFA A +LPYR F A +YDI++L+ + Sbjct: 239 YGDLIDTMVDDGKFTSEESRKLARLGLANYFAAATVLPYRQFHGVAEDFQYDIERLSAFY 298 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 V +ET+CHRLSTLQRP+ RGVPF FVR D AGN+SKRQSAT FHFS GG CPLW +++ Sbjct: 299 SVSYETVCHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYE 358 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 F PG+ L QVAQMPD R Y W+ART SRY PGK+FAIGLGC+L HA +L+YS Sbjct: 359 TFGNPGKILVQVAQMPDGRNYLWVARTVERRASRYGQPGKTFAIGLGCELRHAHRLVYSQ 418 Query: 417 GVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+DL+ C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 GLDLSSEGATTPIGVGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 467 >tr|Q0SEV4|Q0SEV4_RHOSR Tax_Id=101510 SubName: Full=Possible DNA binding protein;[Rhodococcus sp.] Length = 470 Score = 424 bits (1089), Expect = e-116 Identities = 217/467 (46%), Positives = 296/467 (63%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLR+LR + GL+Q ALA+ L +S SY+NQ+E+D RP+TV VLL ++E F + T Sbjct: 3 KTFVGTRLRQLRTERGLSQAALAKTLEISASYLNQIEHDVRPLTVPVLLRISEVFGVDTT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D RL++++REV + A +I E+VA P + + +VN+HRR + TA+L Sbjct: 63 FFSSQDDTRLIAEMREVALDQEMGIDADAQEIAEMVASHPGLAKAMVNMHRRFRNTTAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 +D S MP EEVRD+FY R+NY+ ELD AAEE+ R G + ++ Sbjct: 123 ALATEDRYSDGSGSGSITMPHEEVRDYFYQRQNYLHELDTAAEELTARMRFHRGDVGGEI 182 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 AR L +V L N + PES+ L ++ L+ GQ+ F+ AT++A L Sbjct: 183 ARRLQTVHDVQIV--KRIDLGENVLHRYDPESRLLEISPHLSGGQQVFKFATELAFLEYG 240 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DL+ ++A SDE+ +AR+GLANYFA A +LPY F D A RYDI++L+ + V Sbjct: 241 DLLDKLVAEGGFTSDESVALARLGLANYFAAATVLPYGQFHDVAEDFRYDIERLSAFYSV 300 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 +ETICHRLSTLQRP RGVPF+FVR D AGN+SKRQSAT FHFS GG CPLW +++ F Sbjct: 301 SYETICHRLSTLQRPKLRGVPFMFVRVDRAGNMSKRQSATGFHFSTSGGTCPLWNVYETF 360 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A PG+ + Q+AQMPD R Y WIART RY P K FAIGLGC++ HA +L+Y G+ Sbjct: 361 AYPGKIMNQIAQMPDGRRYLWIARTVERRAQRYGQPAKIFAIGLGCEIRHAHRLVYGDGL 420 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 DL D+ C++C+R +CPQRAFP LG+ + + H S+ PY Sbjct: 421 DLDDSNPGTPIGAGCRVCERVNCPQRAFPPLGKQLDISEHQSSVSPY 467 >tr|C1B091|C1B091_RHOOB Tax_Id=632772 SubName: Full=Putative Xre family DNA-binding protein;[Rhodococcus opacus] Length = 470 Score = 424 bits (1089), Expect = e-116 Identities = 217/467 (46%), Positives = 296/467 (63%), Gaps = 6/467 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLR+LR + GL+Q ALA+ L +S SY+NQ+E+D RP+TV VLL ++E F + T Sbjct: 3 KTFVGTRLRQLRTERGLSQAALAKTLEISASYLNQIEHDVRPLTVPVLLRISEVFGVDTT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D RL++++REV + A +I E+VA P + + +VN+HRR + TA+L Sbjct: 63 FFSSQDDTRLIAEMREVALDQEMGIDADAQEIAEMVASHPGLAKAMVNMHRRFRNTTAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 +D S MP EEVRD+FY R+NY+ ELD AAEE+ R G + ++ Sbjct: 123 ALATEDRYSDGSGSGAITMPHEEVRDYFYQRQNYLHELDTAAEELTARMRFHRGDVGGEI 182 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 AR L +V L N + PES+ L ++ L+ GQ+ F+ AT++A L Sbjct: 183 ARRLQTVHDVQIV--KRIDLGENVLHRYDPESRLLEISPHLSGGQQVFKFATELAFLEYG 240 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DL+ ++A SDE+ +AR+GLANYFA A +LPY F D A RYDI++L+ + V Sbjct: 241 DLLDKLVAEGGFTSDESVALARLGLANYFAAATVLPYGQFHDVAEDFRYDIERLSAFYSV 300 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 +ETICHRLSTLQRP RGVPF+FVR D AGN+SKRQSAT FHFS GG CPLW +++ F Sbjct: 301 SYETICHRLSTLQRPKLRGVPFMFVRVDRAGNMSKRQSATGFHFSTSGGTCPLWNVYETF 360 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A PG+ + Q+AQMPD R Y WIART RY P K FAIGLGC++ HA +L+Y G+ Sbjct: 361 AYPGKIMNQIAQMPDGRRYLWIARTVERRAQRYGQPAKIFAIGLGCEIRHAHRLVYGDGL 420 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 DL D+ C++C+R +CPQRAFP LG+ + + H S+ PY Sbjct: 421 DLDDSNPGTPIGAGCRVCERVNCPQRAFPPLGKQLDISEHQSSVSPY 467 >tr|B1VXK5|B1VXK5_STRGG Tax_Id=455632 SubName: Full=Putative DNA-binding protein;[Streptomyces griseus subsp. griseus] Length = 468 Score = 424 bits (1089), Expect = e-116 Identities = 225/470 (47%), Positives = 297/470 (63%), Gaps = 12/470 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KT+AGARLRRLRED G++Q LAR L +S SY+NQ+E+D RP+TV VLL L E F + Sbjct: 3 KTYAGARLRRLREDRGMSQAELARTLAISPSYLNQMEHDARPLTVPVLLRLTEAFGVDPG 62 Query: 63 YFAPDSDARLVSDLREVF----AEGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ +RLV+DLRE A +P+ + +L ARMPAV + LV+L RR + + Sbjct: 63 FFSERDTSRLVADLREALSGELAAARVSPSDLADLAARMPAVARVLVDLGRRNQRLSERI 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 +D P EE+RDFFY R+NY+ E D+AAE + G+R G + + L Sbjct: 123 ADAGDPRGSDPELPRS---PHEEIRDFFYRRQNYLHETDLAAEAVAAEIGIRPGDIISAL 179 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 + L D G + G L+ + +++TL L+ L GQRAF++ATQ+ALL Sbjct: 180 SGRLADRHGVRFSTETGDRLHS-----YDEKTRTLRLSTRLRPGQRAFRMATQLALLEYG 234 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 D + G A D A +ARIG+ANYFA AL+LPY F AA RYDI++L RF + Sbjct: 235 DGLDGQAAEDFPPGGPAHRLARIGIANYFAAALILPYEAFHTAAEEFRYDIERLTDRFGL 294 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 G+ET+CHRLSTLQRP RGVPF FVR D AGN+SKRQSAT FHFSR GG CPLW +++AF Sbjct: 295 GYETVCHRLSTLQRPRLRGVPFSFVRVDRAGNMSKRQSATGFHFSRAGGTCPLWNVYEAF 354 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A PGR Q+A MPD + + W AR T + PGK+FAIGLGC++ HA +L+YS G+ Sbjct: 355 ASPGRIHVQIAAMPDGQRHLWTARAVTRHRGGWGEPGKTFAIGLGCEIRHAHRLVYSDGL 414 Query: 419 DLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 DL + C++C+R CPQRA P LGRP+R+D + ST +PYP A Sbjct: 415 DLDNASAATPIGMGCRVCERLDCPQRAAPPLGRPLRIDQNASTFVPYPVA 464 >tr|Q73SW4|Q73SW4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 506 Score = 422 bits (1085), Expect = e-116 Identities = 219/471 (46%), Positives = 303/471 (64%), Gaps = 8/471 (1%) Query: 1 VPKTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLP 60 V KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 33 VSKTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVD 92 Query: 61 THYFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATA 116 +F+ D RLV++LREV + P ++ E+V+ P + + +VNLHRR TA Sbjct: 93 ATFFSSQDDTRLVAELREVTMDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTA 152 Query: 117 ELEALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDA 176 +L A D S MP EEVRD+FY R+NY+ ELD AAE++ + L G L Sbjct: 153 QLAAATEERFFDGSGTGSITMPHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLAR 212 Query: 177 QLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 +L R L + G V ++ L + PE+KTL ++ L+ GQ+ F++A ++A L Sbjct: 213 ELTRRLTEVHG--VHINRRIDLGDTVLHRYDPETKTLEISNHLSWGQQVFKMAAELAYLE 270 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 DLI ++A S+E+ +AR+GLANYFA A +LPYR F D A + RYD+++L+ + Sbjct: 271 FGDLIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFRYDVERLSSFY 330 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 V +ETI HRLSTLQRP+ RGVPF F+R D AGN+SKRQSAT FHFS GG CPLW +++ Sbjct: 331 SVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYE 390 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 FA PG+ L Q+AQMPD R Y W+ART +RY PGK+FAIGLGC+L HA +L+YS Sbjct: 391 TFANPGKILVQIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSE 450 Query: 417 GVDLT--DTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+D++ C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 451 GLDVSGGPGTVATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 501 >tr|Q82LG8|Q82LG8_STRAW Tax_Id=33903 SubName: Full=Putative DNA-binding protein;[Streptomyces avermitilis] Length = 468 Score = 421 bits (1083), Expect = e-116 Identities = 222/474 (46%), Positives = 299/474 (63%), Gaps = 20/474 (4%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KT+AGARLRRLRE+ ++Q LAR LG+S SY+NQ+E+D RP+TV VLL L E F + Sbjct: 3 KTYAGARLRRLREERRMSQAELARVLGISPSYLNQMEHDSRPLTVPVLLRLTEAFGVDAG 62 Query: 63 YFAPDSDARLVSDLREVFA----EGPATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ RL++DLRE A E + + + EL +R+PAV + L++L RR Sbjct: 63 FFSERDTTRLMADLREALAREIAETRVSASDLTELASRIPAVAKVLLDLGRRN------- 115 Query: 119 EALHSRATADVSAVSGQP----MPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGL 174 + L R G+P P EE+RDFFY R+NY+ + D+AAE + G+R G + Sbjct: 116 QLLSERLAEAAEGRDGEPDVPRSPHEEIRDFFYRRQNYLHDTDLAAERLAEEIGIRPGEV 175 Query: 175 DAQLARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIAL 234 L L D G + + G L+ + S+TL+L+ L GQRAF++ATQ+AL Sbjct: 176 VRALTARLADRHGVRLTAETGDHLHH-----YDDASRTLHLSSRLRPGQRAFRMATQLAL 230 Query: 235 LTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLAR 294 L D + A D + +ARIG+ANYFA AL+LPYR F AA RYDI++L Sbjct: 231 LEYGDELDHQAAQDFPTATPTHALARIGIANYFAAALILPYRTFHAAAEEARYDIERLTD 290 Query: 295 RFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVI 354 R+ +G+ET+CHRLSTLQRP RGVPF FVR D AGN+SKRQSAT FHFSR GG CPLW + Sbjct: 291 RYGLGYETVCHRLSTLQRPRLRGVPFSFVRVDRAGNLSKRQSATGFHFSRAGGTCPLWNV 350 Query: 355 HQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIY 414 ++AFA PGR Q+A+MPD + Y W AR T + PGK+FAIGLGC++ HA +L+Y Sbjct: 351 YEAFAAPGRIHVQIAEMPDGQRYLWTARAITRHRGGWGEPGKTFAIGLGCEIRHASRLVY 410 Query: 415 SVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPYPPA 468 S G+DL + C++C+R CPQRA P LGRP+R+D +++T +PYP A Sbjct: 411 SDGLDLGNASAAIPIGMGCRVCERLDCPQRAAPPLGRPLRIDQNSTTFVPYPVA 464 >tr|Q0RN86|Q0RN86_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-binding protein;[Frankia alni] Length = 500 Score = 421 bits (1082), Expect = e-115 Identities = 228/500 (45%), Positives = 299/500 (59%), Gaps = 33/500 (6%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G RLR LRE+ ++QV LAR LG+S SY+NQ+E++ RP+TV VLL + E F + Sbjct: 3 KTFVGTRLRELREERAMSQVELARLLGISPSYLNQIEHNSRPLTVPVLLRITEAFGVDAG 62 Query: 63 YFAPDSDARLVSDLREVFAEG------PATPAQIEELVARMPAVGQTLVNLHRRLYDATA 116 +FA RL++++REV ++G PAT A +L ++P L+ LHRR A Sbjct: 63 FFAAHDVTRLIAEVREVLSDGTIGLKVPATDAA--QLAEQLPQTAHALITLHRRYRQANE 120 Query: 117 ELEALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDA 176 L AL + + + PMP EEVRDFFY R+NY+GELD AAE + G GL G + A Sbjct: 121 RLAALTGARGPEPAGPAPAPMPDEEVRDFFYQRQNYVGELDDAAERLAGEIGLTRGRVHA 180 Query: 177 QLARLL-------------------------GDNLGTTVVLDDGQSLNPNSKRMFQPESK 211 L L G G D + L+ + F P+++ Sbjct: 181 VLVERLAYHGIRVHSREPGPDLAGPRDDGREGGRDGREDGRDLDRELDVDVLHRFDPQTR 240 Query: 212 TLYLARWLNRGQRAFQLATQIALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGAL 271 L L+ L GQRAF++A Q+A DL+T + AR + RIGLANYFA AL Sbjct: 241 VLTLSSHLRPGQRAFRMALQLAFAEFDDLVTRLTDEGMLSGPPARTLTRIGLANYFAAAL 300 Query: 272 LLPYRPFLDAAASTRYDIDQLARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNI 331 +LPY F + RYDI++L+ F +GFETICHRLSTLQRP ARGVPF F+R D AGN+ Sbjct: 301 ILPYNVFHTTSERFRYDIERLSEHFGMGFETICHRLSTLQRPRARGVPFSFIRVDRAGNM 360 Query: 332 SKRQSATAFHFSRVGGNCPLWVIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRY 391 SKRQSAT FHFSR GG CPLW +++A A PGR TQ+A MPD R+YFWIART + R+ Sbjct: 361 SKRQSATGFHFSRAGGTCPLWNVYEALAAPGRIHTQIATMPDGRSYFWIARTVSRGYGRF 420 Query: 392 LGPGKSFAIGLGCDLAHADKLIYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGR 451 PGK+FAIGLGC+L HA +L+YS G++L D CK+C+R C QRAFP +GR Sbjct: 421 GRPGKTFAIGLGCELRHASRLVYSTGLNLDDPAAAVPIGIGCKVCERVGCAQRAFPQIGR 480 Query: 452 PVRVDPHTSTDLPYPPAIST 471 + +D + T PYP I++ Sbjct: 481 SLALDENRGTFAPYPADINS 500 >tr|A0QLM4|A0QLM4_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding protein;[Mycobacterium avium] Length = 474 Score = 421 bits (1082), Expect = e-115 Identities = 218/469 (46%), Positives = 302/469 (64%), Gaps = 8/469 (1%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D RLV++LREV + P ++ E+V+ P + + +VNLHRR TA+L Sbjct: 63 FFSSQDDTRLVAELREVTMDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 A D S MP EEVRD+FY R+NY+ ELD AAE++ + L G L +L Sbjct: 123 AAATEERFFDGSGTGSITMPHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLAREL 182 Query: 179 ARLLGDNLGTTVVLDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLTQA 238 R L + G V ++ L + PE+KTL ++ L+ GQ+ F++A ++A L Sbjct: 183 TRRLTEVHG--VHINRRIDLGDTVLHRYDPETKTLEISNHLSWGQQVFKMAAELAYLEFG 240 Query: 239 DLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRFEV 298 DLI ++A S+E+ +AR+GLANYFA A +LPYR F D A + RYD+++L+ + V Sbjct: 241 DLIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFRYDVERLSSFYSV 300 Query: 299 GFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQAF 358 +ETI HRLSTLQRP+ RGVPF F+R D AGN+SKRQSAT FHFS GG CPLW +++ F Sbjct: 301 SYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETF 360 Query: 359 ARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSVGV 418 A PG+ L Q+AQMPD R Y W+ART +RY PGK+FAIGLGC+L HA +L+YS G+ Sbjct: 361 ANPGKILVQIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSEGL 420 Query: 419 DLT--DTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 D++ C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 421 DVSGGPGTVATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 469 >tr|A0PVX1|A0PVX1_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 474 Score = 421 bits (1082), Expect = e-115 Identities = 218/471 (46%), Positives = 303/471 (64%), Gaps = 12/471 (2%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRNERGFSQAALAQLLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +F+ D RLV++LREV + P ++ E+V+ P++ + +VNLHRR TA+L Sbjct: 63 FFSSQDDTRLVAELREVTMDRDLDISVDPTEVAEMVSAHPSLARAMVNLHRRYRITTAQL 122 Query: 119 EALHSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGLDAQL 178 A +D S MP EEVRD+FY R+NY+ ELD AAE++ + L G L ++L Sbjct: 123 AAATEERYSDGSGTGSITMPHEEVRDYFYQRQNYLHELDAAAEDLTIQMRLHHGDLRSEL 182 Query: 179 ARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQIALLT 236 R L + G + +D G ++ P + TL ++ L GQ+ F++A ++A L Sbjct: 183 TRRLTEVHGVRITRRIDLGDTV----LHRLDPATMTLEISNHLASGQQVFKMAAELAYLE 238 Query: 237 QADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQLARRF 296 DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYD+++L+ + Sbjct: 239 FGDLIDAMVTDGKFTSDESRTLARLGLANYFAAAAVLPYRQFHDVAENFRYDVERLSAFY 298 Query: 297 EVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLWVIHQ 356 V +ETI HRLSTLQRP+ RGVPF F+R D AGN+SKRQSAT FHFS GG CPLW +++ Sbjct: 299 SVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYE 358 Query: 357 AFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKLIYSV 416 FA PG+ L Q+AQMPD R Y W+ART +RY PGK+FAIGLGC+L HA +L+YS Sbjct: 359 TFANPGKILVQIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSE 418 Query: 417 GVDLTDTE--XXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 G+DL+ C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 GLDLSGDPNIAATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 469 >tr|Q1BEC9|Q1BEC9_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, XRE family;[Mycobacterium sp.] Length = 475 Score = 421 bits (1081), Expect = e-115 Identities = 224/473 (47%), Positives = 308/473 (65%), Gaps = 15/473 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA D RLV++LREV + ++I ++VA P + + +VNLHRR T +L Sbjct: 63 FFASQDDTRLVAELREVAMDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQL 122 Query: 119 EAL----HSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGL 174 A +S T S MP EEVRD+FY R+NY+ ELD AAE++ R + G L Sbjct: 123 AAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYLHELDSAAEDLTVRMRMHRGDL 182 Query: 175 DAQLARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQI 232 +L+ L G +V +D G+++ F+P +KTL ++ L+ GQ+ F++A ++ Sbjct: 183 AGELSNRLSTVHGVHIVRRIDLGETV----LHRFEPGTKTLEMSTHLSVGQQVFKMAAEL 238 Query: 233 ALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQL 292 A L DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYD+++L Sbjct: 239 AYLEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERL 298 Query: 293 ARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLW 352 + ++V +ETI HRLSTLQRP+ RGVPF FVR D AGN+SKRQSAT FHFS GG CPLW Sbjct: 299 SAFYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLW 358 Query: 353 VIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKL 412 +++ FA PG+ L Q+AQMPD R Y W+ART SRY PGK+FAIGLGC+L HA +L Sbjct: 359 NVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPGKTFAIGLGCELRHAHRL 418 Query: 413 IYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 +YS G+DL+ E C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 VYSEGLDLSG-ENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 470 >tr|A3PU61|A3PU61_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 475 Score = 421 bits (1081), Expect = e-115 Identities = 224/473 (47%), Positives = 308/473 (65%), Gaps = 15/473 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA D RLV++LREV + ++I ++VA P + + +VNLHRR T +L Sbjct: 63 FFASQDDTRLVAELREVTMDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQL 122 Query: 119 EAL----HSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGL 174 A +S T S MP EEVRD+FY R+NY+ ELD AAE++ R + G L Sbjct: 123 AAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYLHELDSAAEDLTVRMRMHRGDL 182 Query: 175 DAQLARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQI 232 +L+ L G +V +D G+++ F+P +KTL ++ L+ GQ+ F++A ++ Sbjct: 183 AGELSNRLSTVHGVHIVRRIDLGETV----LHRFEPGTKTLEMSTHLSVGQQVFKMAAEL 238 Query: 233 ALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQL 292 A L DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYD+++L Sbjct: 239 AYLEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERL 298 Query: 293 ARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLW 352 + ++V +ETI HRLSTLQRP+ RGVPF FVR D AGN+SKRQSAT FHFS GG CPLW Sbjct: 299 SAFYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLW 358 Query: 353 VIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKL 412 +++ FA PG+ L Q+AQMPD R Y W+ART SRY PGK+FAIGLGC+L HA +L Sbjct: 359 NVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPGKTFAIGLGCELRHAHRL 418 Query: 413 IYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 +YS G+DL+ E C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 VYSEGLDLSG-ENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 470 >tr|A1UAK5|A1UAK5_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 475 Score = 421 bits (1081), Expect = e-115 Identities = 224/473 (47%), Positives = 308/473 (65%), Gaps = 15/473 (3%) Query: 3 KTFAGARLRRLREDHGLTQVALARALGLSTSYVNQLENDQRPITVSVLLALAERFDLPTH 62 KTF G+R+R+LR + G +Q ALA+ L +S SY+NQ+E+D RP+TV+VLL + E F + Sbjct: 3 KTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDAT 62 Query: 63 YFAPDSDARLVSDLREVFAEGP----ATPAQIEELVARMPAVGQTLVNLHRRLYDATAEL 118 +FA D RLV++LREV + ++I ++VA P + + +VNLHRR T +L Sbjct: 63 FFASQDDTRLVAELREVAMDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQL 122 Query: 119 EAL----HSRATADVSAVSGQPMPFEEVRDFFYDRKNYIGELDIAAEEMFGRHGLRLGGL 174 A +S T S MP EEVRD+FY R+NY+ ELD AAE++ R + G L Sbjct: 123 AAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYLHELDSAAEDLTVRMRMHRGDL 182 Query: 175 DAQLARLLGDNLGTTVV--LDDGQSLNPNSKRMFQPESKTLYLARWLNRGQRAFQLATQI 232 +L+ L G +V +D G+++ F+P +KTL ++ L+ GQ+ F++A ++ Sbjct: 183 AGELSNRLSTVHGVHIVRRIDLGETV----LHRFEPGTKTLEMSTHLSVGQQVFKMAAEL 238 Query: 233 ALLTQADLITGIIAGDDQLSDEARGVARIGLANYFAGALLLPYRPFLDAAASTRYDIDQL 292 A L DLI ++ SDE+R +AR+GLANYFA A +LPYR F D A + RYD+++L Sbjct: 239 AYLEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERL 298 Query: 293 ARRFEVGFETICHRLSTLQRPNARGVPFIFVRTDSAGNISKRQSATAFHFSRVGGNCPLW 352 + ++V +ETI HRLSTLQRP+ RGVPF FVR D AGN+SKRQSAT FHFS GG CPLW Sbjct: 299 SAFYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLW 358 Query: 353 VIHQAFARPGRFLTQVAQMPDERTYFWIARTTTAEPSRYLGPGKSFAIGLGCDLAHADKL 412 +++ FA PG+ L Q+AQMPD R Y W+ART SRY PGK+FAIGLGC+L HA +L Sbjct: 359 NVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPGKTFAIGLGCELRHAHRL 418 Query: 413 IYSVGVDLTDTEXXXXXXXXCKICDRPSCPQRAFPYLGRPVRVDPHTSTDLPY 465 +YS G+DL+ E C++C+R +CPQRAFP LGR + +D H ST PY Sbjct: 419 VYSEGLDLSG-ENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPY 470 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.322 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,394,649,042 Number of extensions: 136017965 Number of successful extensions: 365496 Number of sequences better than 10.0: 2028 Number of HSP's gapped: 366907 Number of HSP's successfully gapped: 2072 Length of query: 473 Length of database: 3,846,993,858 Length adjustment: 141 Effective length of query: 332 Effective length of database: 2,257,190,235 Effective search space: 749387158020 Effective search space used: 749387158020 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 82 (36.2 bits)