BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1480 (432 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|B2HGE5|NUOD_MYCMM Tax_Id=216594 (nuoD)RecName: Full=NADH-quin... 875 0.0 sp|A0PR41|NUOD_MYCUA Tax_Id=362242 (nuoD)RecName: Full=NADH-quin... 870 0.0 sp|Q73V12|NUOD_MYCPA Tax_Id=1770 (nuoD)RecName: Full=NADH-quinon... 813 0.0 sp|A0QJV0|NUOD_MYCA1 Tax_Id=243243 (nuoD)RecName: Full=NADH-quin... 813 0.0 sp|P65569|NUOD_MYCTU Tax_Id=1773 (nuoD)RecName: Full=NADH-quinon... 812 0.0 sp|A5U7G4|NUOD_MYCTA Tax_Id=419947 (nuoD)RecName: Full=NADH-quin... 812 0.0 sp|A1KNE4|NUOD_MYCBP Tax_Id=410289 (nuoD)RecName: Full=NADH-quin... 812 0.0 sp|P65570|NUOD_MYCBO Tax_Id=1765 (nuoD)RecName: Full=NADH-quinon... 812 0.0 tr|C6DX86|C6DX86_MYCTK Tax_Id=478434 SubName: Full=NADH dehydrog... 812 0.0 tr|C1AGR5|C1AGR5_MYCBT Tax_Id=561275 (nuoD)SubName: Full=NADH de... 812 0.0 tr|A5WS55|A5WS55_MYCTF Tax_Id=336982 SubName: Full=NADH dehydrog... 812 0.0 tr|A4KL46|A4KL46_MYCTU Tax_Id=395095 SubName: Full=NADH dehydrog... 812 0.0 tr|A2VNV3|A2VNV3_MYCTU Tax_Id=348776 SubName: Full=NADH dehydrog... 812 0.0 sp|Q1BBP6|NUOD_MYCSS Tax_Id=164756 (nuoD)RecName: Full=NADH-quin... 734 0.0 sp|A1UDA1|NUOD_MYCSK Tax_Id=189918 (nuoD)RecName: Full=NADH-quin... 734 0.0 sp|A3PWR8|NUOD_MYCSJ Tax_Id=164757 (nuoD)RecName: Full=NADH-quin... 734 0.0 sp|A0QU33|NUOD_MYCS2 Tax_Id=246196 (nuoD)RecName: Full=NADH-quin... 724 0.0 tr|D0LDB2|D0LDB2_GORB4 Tax_Id=526226 SubName: Full=NADH dehydrog... 722 0.0 sp|A1T6A3|NUOD_MYCVP Tax_Id=350058 (nuoD)RecName: Full=NADH-quin... 714 0.0 sp|A4TDA8|NUOD_MYCGI Tax_Id=350054 (nuoD)RecName: Full=NADH-quin... 714 0.0 sp|B1MPG7|NUOD_MYCA9 Tax_Id=561007 (nuoD)RecName: Full=NADH-quin... 711 0.0 sp|Q5YWD0|NUOD_NOCFA Tax_Id=37329 (nuoD)RecName: Full=NADH-quino... 706 0.0 tr|C3JKF2|C3JKF2_RHOER Tax_Id=596309 (nuoD)SubName: Full=NADH de... 697 0.0 sp|Q0S447|NUOD_RHOSR Tax_Id=101510 (nuoD)RecName: Full=NADH-quin... 696 0.0 tr|C0ZYJ7|C0ZYJ7_RHOE4 Tax_Id=234621 (nuoD)SubName: Full=NADH-qu... 696 0.0 tr|C1AYM6|C1AYM6_RHOOB Tax_Id=632772 (nuoD)SubName: Full=NADH-qu... 692 0.0 sp|Q9XAQ7|NUOD2_STRCO Tax_Id=1902 (nuoD2)RecName: Full=NADH-quin... 661 0.0 tr|B4V2X3|B4V2X3_9ACTO Tax_Id=465541 SubName: Full=NADH dehydrog... 660 0.0 sp|Q82DX8|NUOD1_STRAW Tax_Id=33903 (nuoD1)RecName: Full=NADH-qui... 657 0.0 tr|B5HDM5|B5HDM5_STRPR Tax_Id=457429 SubName: Full=NuoD;[Strepto... 656 0.0 tr|C9YXV9|C9YXV9_STRSW Tax_Id=680198 (nuoD)SubName: Full=NuoD, N... 653 0.0 sp|B1W516|NUOD1_STRGG Tax_Id=455632 (nuoD1)RecName: Full=NADH-qu... 652 0.0 tr|C2AVH2|C2AVH2_TSUPA Tax_Id=521096 SubName: Full=NADH dehydrog... 652 0.0 tr|C9N6C5|C9N6C5_9ACTO Tax_Id=591167 SubName: Full=NADH dehydrog... 649 0.0 tr|B5HQD2|B5HQD2_9ACTO Tax_Id=463191 SubName: Full=NADH dehydrog... 648 0.0 tr|Q0QMN9|Q0QMN9_9ACTO Tax_Id=358765 SubName: Full=Menaquinone o... 640 0.0 tr|B5GWF0|B5GWF0_STRCL Tax_Id=443255 SubName: Full=NADH dehydrog... 640 0.0 tr|B5GCW9|B5GCW9_9ACTO Tax_Id=465543 SubName: Full=NuoD;[Strepto... 637 e-180 sp|Q47LE7|NUOD_THEFY Tax_Id=269800 (nuoD)RecName: Full=NADH-quin... 632 e-179 tr|A3THJ0|A3THJ0_9MICO Tax_Id=313589 SubName: Full=NADH dehydrog... 631 e-179 tr|C7QCP9|C7QCP9_CATAD Tax_Id=479433 SubName: Full=NADH dehydrog... 622 e-176 sp|A1SE30|NUOD_NOCSJ Tax_Id=196162 (nuoD)RecName: Full=NADH-quin... 614 e-174 tr|C1YIA9|C1YIA9_NOCDA Tax_Id=446468 SubName: Full=NADH dehydrog... 613 e-173 tr|D1A468|D1A468_THECU Tax_Id=471852 SubName: Full=NADH dehydrog... 613 e-173 tr|C1WGP2|C1WGP2_9ACTO Tax_Id=479435 SubName: Full=NADH dehydrog... 610 e-173 tr|C4RKR1|C4RKR1_9ACTO Tax_Id=219305 SubName: Full=NADH-quinone ... 599 e-169 tr|C4E4P2|C4E4P2_STRRS Tax_Id=479432 SubName: Full=NADH dehydrog... 599 e-169 sp|Q0RRW5|NUOD_FRAAA Tax_Id=326424 (nuoD)RecName: Full=NADH-quin... 596 e-168 sp|A8LC98|NUOD_FRASN Tax_Id=298653 (nuoD)RecName: Full=NADH-quin... 594 e-168 sp|A0LRI4|NUOD_ACIC1 Tax_Id=351607 (nuoD)RecName: Full=NADH-quin... 594 e-168 >sp|B2HGE5|NUOD_MYCMM Tax_Id=216594 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium marinum] Length = 432 Score = 875 bits (2260), Expect = 0.0 Identities = 432/432 (100%), Positives = 432/432 (100%) Query: 1 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA 60 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA Sbjct: 1 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA 60 Query: 61 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV 120 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV Sbjct: 61 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV 120 Query: 121 NVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI 180 NVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI Sbjct: 121 NVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI 180 Query: 181 RPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG 240 RPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG Sbjct: 181 RPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG 240 Query: 241 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC 300 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC Sbjct: 241 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC 300 Query: 301 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV Sbjct: 301 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 Query: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV Sbjct: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 Query: 421 ASIDPVMGGVDR 432 ASIDPVMGGVDR Sbjct: 421 ASIDPVMGGVDR 432 >sp|A0PR41|NUOD_MYCUA Tax_Id=362242 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium ulcerans] Length = 432 Score = 870 bits (2247), Expect = 0.0 Identities = 430/432 (99%), Positives = 430/432 (99%) Query: 1 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA 60 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA Sbjct: 1 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA 60 Query: 61 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV 120 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV Sbjct: 61 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV 120 Query: 121 NVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI 180 NVIRVMMMELNRISSHLVALA GGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI Sbjct: 121 NVIRVMMMELNRISSHLVALAAGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI 180 Query: 181 RPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG 240 RPGGVAQDLPPD PTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG Sbjct: 181 RPGGVAQDLPPDRPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG 240 Query: 241 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC 300 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC Sbjct: 241 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC 300 Query: 301 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV Sbjct: 301 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 Query: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV Sbjct: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 Query: 421 ASIDPVMGGVDR 432 ASIDPVMGGVDR Sbjct: 421 ASIDPVMGGVDR 432 >sp|Q73V12|NUOD_MYCPA Tax_Id=1770 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium paratuberculosis] Length = 441 Score = 813 bits (2101), Expect = 0.0 Identities = 394/428 (92%), Positives = 414/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ET++VAGGQDW+++VEAAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI Sbjct: 14 ETLVVAGGQDWDKVVEAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 73 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITD+IPERVNVIR Sbjct: 74 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDQIPERVNVIR 133 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 VMMMELNRISSHLVALATGGMELGAMTPMFVGFR REI+L+LFESITGLRMNSAYIRPGG Sbjct: 134 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRGREIVLTLFESITGLRMNSAYIRPGG 193 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMGDLLNENAIWKARTQD+GYLDL GCMALGITGP Sbjct: 194 VAQDLPPNAKTEIAQALDQLRQPLREMGDLLNENAIWKARTQDIGYLDLTGCMALGITGP 253 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILR+TGLPHDLRKSEPYCGYENYEFDVITAD CDAYGRYMIRVKEMWESIKIVEQCLD+L Sbjct: 254 ILRATGLPHDLRKSEPYCGYENYEFDVITADTCDAYGRYMIRVKEMWESIKIVEQCLDKL 313 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 +PGP M+E+ K+AWPADLKVGPDG+GNSPEHIAKIMG SMEALIHHFKLVTEGIRVP GQ Sbjct: 314 QPGPIMVENGKIAWPADLKVGPDGLGNSPEHIAKIMGGSMEALIHHFKLVTEGIRVPPGQ 373 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VY AVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLITAVASID Sbjct: 374 VYTAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLITAVASID 433 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 434 PVMGGVDR 441 >sp|A0QJV0|NUOD_MYCA1 Tax_Id=243243 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium avium] Length = 441 Score = 813 bits (2101), Expect = 0.0 Identities = 394/428 (92%), Positives = 414/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ET++VAGGQDW+++VEAAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI Sbjct: 14 ETLVVAGGQDWDKVVEAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 73 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITD+IPERVNVIR Sbjct: 74 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDQIPERVNVIR 133 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 VMMMELNRISSHLVALATGGMELGAMTPMFVGFR REI+L+LFESITGLRMNSAYIRPGG Sbjct: 134 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRGREIVLTLFESITGLRMNSAYIRPGG 193 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMGDLLNENAIWKARTQD+GYLDL GCMALGITGP Sbjct: 194 VAQDLPPNAKTEIAQALDQLRQPLREMGDLLNENAIWKARTQDIGYLDLTGCMALGITGP 253 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILR+TGLPHDLRKSEPYCGYENYEFDVITAD CDAYGRYMIRVKEMWESIKIVEQCLD+L Sbjct: 254 ILRATGLPHDLRKSEPYCGYENYEFDVITADTCDAYGRYMIRVKEMWESIKIVEQCLDKL 313 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 +PGP M+E+ K+AWPADLKVGPDG+GNSPEHIAKIMG SMEALIHHFKLVTEGIRVP GQ Sbjct: 314 QPGPIMVENGKIAWPADLKVGPDGLGNSPEHIAKIMGGSMEALIHHFKLVTEGIRVPPGQ 373 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VY AVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLITAVASID Sbjct: 374 VYTAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLITAVASID 433 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 434 PVMGGVDR 441 >sp|P65569|NUOD_MYCTU Tax_Id=1773 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium tuberculosis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >sp|A5U7G4|NUOD_MYCTA Tax_Id=419947 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium tuberculosis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >sp|A1KNE4|NUOD_MYCBP Tax_Id=410289 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium bovis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >sp|P65570|NUOD_MYCBO Tax_Id=1765 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium bovis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >tr|C6DX86|C6DX86_MYCTK Tax_Id=478434 SubName: Full=NADH dehydrogenase subunit I D nuoD;[Mycobacterium tuberculosis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >tr|C1AGR5|C1AGR5_MYCBT Tax_Id=561275 (nuoD)SubName: Full=NADH dehydrogenase subunit D; EC=1.6.5.3;[Mycobacterium bovis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >tr|A5WS55|A5WS55_MYCTF Tax_Id=336982 SubName: Full=NADH dehydrogenase I chain D nuoD (NADH-ubiquinone oxidoreductase chain D);[Mycobacterium tuberculosis] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >tr|A4KL46|A4KL46_MYCTU Tax_Id=395095 SubName: Full=NADH dehydrogenase I (Chain D) nuoD (NADH-ubiquinone oxidoreductase chain D);[Mycobacterium tuberculosis str. Haarlem] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >tr|A2VNV3|A2VNV3_MYCTU Tax_Id=348776 SubName: Full=NADH dehydrogenase I (Chain D) nuoD (NADH-ubiquinone oxidoreductase chain D);[Mycobacterium tuberculosis C] Length = 440 Score = 812 bits (2098), Expect = 0.0 Identities = 395/428 (92%), Positives = 413/428 (96%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 ETVLVAGGQDW ++V+AAR ADPGERIVVNMGPQHPSTHGVLRLILEIEGETV EARCGI Sbjct: 13 ETVLVAGGQDWQQVVDAARSADPGERIVVNMGPQHPSTHGVLRLILEIEGETVVEARCGI 72 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR Sbjct: 73 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 132 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMTPMFVGFRAREI+L+LFE ITGLRMNSAYIRPGG Sbjct: 133 VLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRPGG 192 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 VAQDLPP+ TEIA+A+ LRQPLREMG+LLNENAIWKARTQ VGYLDL GCMALGITGP Sbjct: 193 VAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGITGP 252 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 ILRSTGLPHDLRKSEPYCGY++YEFDVIT D CDAYGRYMIRVKEMWES+KIVEQCLD+L Sbjct: 253 ILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLDKL 312 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGPTMI DRKLAWPADL+VGPDG+GNSP+HIAKIMGSSMEALIHHFKLVTEGIRVPAGQ Sbjct: 313 RPGPTMISDRKLAWPADLQVGPDGLGNSPKHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 372 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQ+VAAM EGGMVADLI AVASID Sbjct: 373 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVADLIAAVASID 432 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 433 PVMGGVDR 440 >sp|Q1BBP6|NUOD_MYCSS Tax_Id=164756 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium sp.] Length = 446 Score = 734 bits (1894), Expect = 0.0 Identities = 357/431 (82%), Positives = 389/431 (90%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T T+TV+V GG+DW ++V AA A GERIVVNMGPQHPSTHGVLRLILEIEGET+TEAR Sbjct: 16 TGTDTVIVVGGEDWEQVVAAAEQAQAGERIVVNMGPQHPSTHGVLRLILEIEGETITEAR 75 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLG+TD IPERVN Sbjct: 76 CGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGVTDAIPERVN 135 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVM+MELNRISSHLVALATGGMELGAM+ MF GFR RE ILS+FE ITGLRMN AYIR Sbjct: 136 VIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILSVFEMITGLRMNHAYIR 195 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+A DLP I + +A L LR++ +LLNEN IWKARTQ +GYLDLAGCMALGI Sbjct: 196 PGGLAADLPDGAVPRIRELLALLPGRLRDLENLLNENYIWKARTQGIGYLDLAGCMALGI 255 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRSTGLPHDLR+++PYCGYE+YEFDVIT DGCDAYGRY+IRVKEM ES+KIVEQC+ Sbjct: 256 TGPVLRSTGLPHDLRRAQPYCGYEDYEFDVITDDGCDAYGRYLIRVKEMRESLKIVEQCV 315 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP MI D+KLAWPADL++GPDG+GNSP HIA+IMG SME LIHHFKLVTEGIRVP Sbjct: 316 DRLKPGPVMIADKKLAWPADLELGPDGLGNSPAHIARIMGQSMEGLIHHFKLVTEGIRVP 375 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQVY AVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM EGGMVAD I+AVA Sbjct: 376 AGQVYTAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCEGGMVADAISAVA 435 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 436 SIDPVMGGVDR 446 >sp|A1UDA1|NUOD_MYCSK Tax_Id=189918 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium sp.] Length = 446 Score = 734 bits (1894), Expect = 0.0 Identities = 357/431 (82%), Positives = 389/431 (90%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T T+TV+V GG+DW ++V AA A GERIVVNMGPQHPSTHGVLRLILEIEGET+TEAR Sbjct: 16 TGTDTVIVVGGEDWEQVVAAAEQAQAGERIVVNMGPQHPSTHGVLRLILEIEGETITEAR 75 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLG+TD IPERVN Sbjct: 76 CGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGVTDAIPERVN 135 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVM+MELNRISSHLVALATGGMELGAM+ MF GFR RE ILS+FE ITGLRMN AYIR Sbjct: 136 VIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILSVFEMITGLRMNHAYIR 195 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+A DLP I + +A L LR++ +LLNEN IWKARTQ +GYLDLAGCMALGI Sbjct: 196 PGGLAADLPDGAVPRIRELLALLPGRLRDLENLLNENYIWKARTQGIGYLDLAGCMALGI 255 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRSTGLPHDLR+++PYCGYE+YEFDVIT DGCDAYGRY+IRVKEM ES+KIVEQC+ Sbjct: 256 TGPVLRSTGLPHDLRRAQPYCGYEDYEFDVITDDGCDAYGRYLIRVKEMRESLKIVEQCV 315 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP MI D+KLAWPADL++GPDG+GNSP HIA+IMG SME LIHHFKLVTEGIRVP Sbjct: 316 DRLKPGPVMIADKKLAWPADLELGPDGLGNSPAHIARIMGQSMEGLIHHFKLVTEGIRVP 375 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQVY AVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM EGGMVAD I+AVA Sbjct: 376 AGQVYTAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCEGGMVADAISAVA 435 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 436 SIDPVMGGVDR 446 >sp|A3PWR8|NUOD_MYCSJ Tax_Id=164757 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium sp.] Length = 446 Score = 734 bits (1894), Expect = 0.0 Identities = 357/431 (82%), Positives = 389/431 (90%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T T+TV+V GG+DW ++V AA A GERIVVNMGPQHPSTHGVLRLILEIEGET+TEAR Sbjct: 16 TGTDTVIVVGGEDWEQVVAAAEQAQAGERIVVNMGPQHPSTHGVLRLILEIEGETITEAR 75 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLG+TD IPERVN Sbjct: 76 CGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGVTDAIPERVN 135 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVM+MELNRISSHLVALATGGMELGAM+ MF GFR RE ILS+FE ITGLRMN AYIR Sbjct: 136 VIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILSVFEMITGLRMNHAYIR 195 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+A DLP I + +A L LR++ +LLNEN IWKARTQ +GYLDLAGCMALGI Sbjct: 196 PGGLAADLPDGAVPRIRELLALLPGRLRDLENLLNENYIWKARTQGIGYLDLAGCMALGI 255 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRSTGLPHDLR+++PYCGYE+YEFDVIT DGCDAYGRY+IRVKEM ES+KIVEQC+ Sbjct: 256 TGPVLRSTGLPHDLRRAQPYCGYEDYEFDVITDDGCDAYGRYLIRVKEMRESLKIVEQCV 315 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP MI D+KLAWPADL++GPDG+GNSP HIA+IMG SME LIHHFKLVTEGIRVP Sbjct: 316 DRLKPGPVMIADKKLAWPADLELGPDGLGNSPAHIARIMGQSMEGLIHHFKLVTEGIRVP 375 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQVY AVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM EGGMVAD I+AVA Sbjct: 376 AGQVYTAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCEGGMVADAISAVA 435 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 436 SIDPVMGGVDR 446 >sp|A0QU33|NUOD_MYCS2 Tax_Id=246196 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium smegmatis] Length = 442 Score = 724 bits (1870), Expect = 0.0 Identities = 357/431 (82%), Positives = 384/431 (89%), Gaps = 3/431 (0%) Query: 5 ETVLVAGGQDWNEIVEAARG---ADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 E V+V GG DW+E+V AAR A GERIVVNMGPQHPSTHGVLRLILEIEGE +TEAR Sbjct: 12 EKVVVVGGNDWHEVVAAARAGAAAQAGERIVVNMGPQHPSTHGVLRLILEIEGEIITEAR 71 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITD+IPER + Sbjct: 72 CGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDDIPERAS 131 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVM+MELNRISSHLVALATGGMELGAM+ MF GFR RE IL +FESITGLRMN AYIR Sbjct: 132 VIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILRVFESITGLRMNHAYIR 191 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+A DLP D T++ + + L + L+++ DLLNEN IWKART VGYLDL GCMALGI Sbjct: 192 PGGLAADLPDDAITQVRRLVEILPKRLKDLEDLLNENYIWKARTVGVGYLDLTGCMALGI 251 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRSTGLPHDLRK++PYCGYENYEFDVIT D CD+YGRY+IRVKEM ES+KIVEQCL Sbjct: 252 TGPILRSTGLPHDLRKAQPYCGYENYEFDVITDDRCDSYGRYIIRVKEMHESVKIVEQCL 311 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 RL+PGP MI D+KLAWPADLK+GPDG+GNSPEHIAKIMG SME LIHHFKLVTEGIRVP Sbjct: 312 ARLKPGPVMISDKKLAWPADLKLGPDGLGNSPEHIAKIMGRSMEGLIHHFKLVTEGIRVP 371 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAA EGGMVAD I AVA Sbjct: 372 PGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAATCEGGMVADAIAAVA 431 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 432 SIDPVMGGVDR 442 >tr|D0LDB2|D0LDB2_GORB4 Tax_Id=526226 SubName: Full=NADH dehydrogenase I, D subunit; EC=1.6.99.5;[Gordonia bronchialis] Length = 446 Score = 722 bits (1864), Expect = 0.0 Identities = 362/446 (81%), Positives = 389/446 (87%), Gaps = 14/446 (3%) Query: 1 MTDTETVLVAG----------GQDWNEIVEAARGA---DPG-ERIVVNMGPQHPSTHGVL 46 MTDT T G GQDW +IV R PG ERIVVNMGPQHPSTHGVL Sbjct: 1 MTDTTTGHAPGPKATRTYTVTGQDWEQIVSDVRTRAEQQPGDERIVVNMGPQHPSTHGVL 60 Query: 47 RLILEIEGETVTEARCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGV 106 RLILEIEGETVTEARCGIGYLHTGIEKNLE+R WTQGVTFVTRMDYLSPFFNETAYCLGV Sbjct: 61 RLILEIEGETVTEARCGIGYLHTGIEKNLEFRNWTQGVTFVTRMDYLSPFFNETAYCLGV 120 Query: 107 EKLLGITDEIPERVNVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSL 166 EKLLGITD+IPER VIRVMMMELNRI+SHLVALATGGMELGA+T MF+GFR RE+IL L Sbjct: 121 EKLLGITDDIPERATVIRVMMMELNRITSHLVALATGGMELGAVTAMFLGFREREMILDL 180 Query: 167 FESITGLRMNSAYIRPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQ 226 FE ITGLRMN AYIRPGGVAQDLP DG ++A+ + L L E+GDLLN+N IWKARTQ Sbjct: 181 FELITGLRMNHAYIRPGGVAQDLPSDGVDKVAEVLEILPGRLDELGDLLNDNYIWKARTQ 240 Query: 227 DVGYLDLAGCMALGITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIR 286 VGYLDL GCMALGITGP+LRSTGLPHDLRKS+PYCGYENY+FDVIT CD+YGRY+IR Sbjct: 241 GVGYLDLTGCMALGITGPVLRSTGLPHDLRKSQPYCGYENYDFDVITDTTCDSYGRYLIR 300 Query: 287 VKEMWESIKIVEQCLDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEA 346 VKEM ESIKIV QCL+RLRPGP M+ DRK+AWPADL +GPDG+GNSPEHIA+IMG+SMEA Sbjct: 301 VKEMRESIKIVRQCLERLRPGPVMVADRKIAWPADLALGPDGLGNSPEHIARIMGTSMEA 360 Query: 347 LIHHFKLVTEGIRVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAA 406 LIHHFKLVTEG+RVPAGQ YVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAA Sbjct: 361 LIHHFKLVTEGMRVPAGQCYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAA 420 Query: 407 MSEGGMVADLITAVASIDPVMGGVDR 432 M EGGMVAD+ITAVASIDPVMGGVDR Sbjct: 421 MCEGGMVADVITAVASIDPVMGGVDR 446 >sp|A1T6A3|NUOD_MYCVP Tax_Id=350058 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium vanbaalenii] Length = 442 Score = 714 bits (1844), Expect = 0.0 Identities = 353/434 (81%), Positives = 384/434 (88%), Gaps = 6/434 (1%) Query: 5 ETVLVAGGQDWNEIVEAAR---GADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 E V+V GGQDW+++V AAR GERIVVNMGPQHPSTHGVLRLILEIEGE + EAR Sbjct: 9 ERVVVVGGQDWDQVVAAARQNAAEHAGERIVVNMGPQHPSTHGVLRLILEIEGEIIVEAR 68 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITD IPER + Sbjct: 69 CGIGYLHTGIEKNLEFRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDAIPERAS 128 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVMMMELNRISSHLVALATGGMELGAMT MF+GFR RE+ILS+FE+ITGLRMN+AYIR Sbjct: 129 VIRVMMMELNRISSHLVALATGGMELGAMTAMFLGFRERELILSVFETITGLRMNNAYIR 188 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGGVA DLP + ++ + L + LR+M DLLNEN IWKARTQ +GYLDL GCMALGI Sbjct: 189 PGGVAADLPDEALPQVRDLLTLLPKRLRDMEDLLNENYIWKARTQGIGYLDLTGCMALGI 248 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRSTGLPHDLRK++PYCGYE Y+FDV+T D CD+YGRY+IRVKEM +SI+IVEQC+ Sbjct: 249 TGPVLRSTGLPHDLRKAQPYCGYETYDFDVVTDDQCDSYGRYLIRVKEMHQSIRIVEQCV 308 Query: 302 DRLR---PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGI 358 RL P MI D+KLAWPADLKVGPDG+GNSPEHIAKIMG SME LIHHFKLVTEGI Sbjct: 309 QRLERSVGAPVMITDKKLAWPADLKVGPDGLGNSPEHIAKIMGHSMEGLIHHFKLVTEGI 368 Query: 359 RVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLIT 418 RVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM EGGMVAD IT Sbjct: 369 RVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCEGGMVADAIT 428 Query: 419 AVASIDPVMGGVDR 432 AVASIDPVMGGVDR Sbjct: 429 AVASIDPVMGGVDR 442 >sp|A4TDA8|NUOD_MYCGI Tax_Id=350054 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium gilvum] Length = 451 Score = 714 bits (1844), Expect = 0.0 Identities = 356/443 (80%), Positives = 386/443 (87%), Gaps = 15/443 (3%) Query: 5 ETVLVAGGQDWNEIVEAAR------------GADPGERIVVNMGPQHPSTHGVLRLILEI 52 E V+V GGQDW+++V AAR GERIVVNMGPQHPSTHGVLRLILEI Sbjct: 9 ERVIVVGGQDWDQVVTAARQMSNSSSRAGDAAEHAGERIVVNMGPQHPSTHGVLRLILEI 68 Query: 53 EGETVTEARCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGI 112 EGET+ EARCGIGYLHTGIEKNLE+R WTQGVTFVTRMDYLSPFFNETAYCLGVEKLLG+ Sbjct: 69 EGETIVEARCGIGYLHTGIEKNLEFRTWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGV 128 Query: 113 TDEIPERVNVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITG 172 TD+IPER +VIRVMMMELNRISSHLVALATGGMELGAMT MF+GFR RE+ILS+FE+ITG Sbjct: 129 TDDIPERASVIRVMMMELNRISSHLVALATGGMELGAMTAMFLGFRERELILSVFETITG 188 Query: 173 LRMNSAYIRPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLD 232 LRMNSAYIRPGGVA DLP +G +I + + L LR+M +LLNEN IWKART VGYLD Sbjct: 189 LRMNSAYIRPGGVAADLPEEGLPQIRELLTLLPTRLRDMENLLNENYIWKARTLGVGYLD 248 Query: 233 LAGCMALGITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWE 292 L GCMALGITGP+LRSTGLPHDLRKS+PYCGY+ Y+FDVIT D CD+YGRY+IRVKEM E Sbjct: 249 LTGCMALGITGPVLRSTGLPHDLRKSQPYCGYQTYDFDVITDDRCDSYGRYLIRVKEMRE 308 Query: 293 SIKIVEQCLDRLRPG---PTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIH 349 S++IVEQC++RL P MI DRKLAWPADLKVGPDG+GNSPEHIAKIMG SME LIH Sbjct: 309 SLRIVEQCVERLERSTGEPVMITDRKLAWPADLKVGPDGLGNSPEHIAKIMGHSMEGLIH 368 Query: 350 HFKLVTEGIRVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSE 409 HFKLVTEGIRVP GQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM E Sbjct: 369 HFKLVTEGIRVPPGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCE 428 Query: 410 GGMVADLITAVASIDPVMGGVDR 432 GGMVAD ITAVASIDPVMGGVDR Sbjct: 429 GGMVADAITAVASIDPVMGGVDR 451 >sp|B1MPG7|NUOD_MYCA9 Tax_Id=561007 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Mycobacterium abscessus] Length = 432 Score = 711 bits (1835), Expect = 0.0 Identities = 345/428 (80%), Positives = 382/428 (89%), Gaps = 1/428 (0%) Query: 5 ETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGI 64 E L+AGGQDW+EIV AA G ERIVVNMGPQHPSTHGVLRLILEIEGETVT+ RCGI Sbjct: 6 EIHLMAGGQDWDEIVTAA-GQATDERIVVNMGPQHPSTHGVLRLILEIEGETVTDVRCGI 64 Query: 65 GYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIR 124 GYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVE+LLGI DEIPER NVIR Sbjct: 65 GYLHTGIEKNLEYRTWTQGVTFVTRMDYLSPFFNETAYCLGVEQLLGIADEIPERANVIR 124 Query: 125 VMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGG 184 V+MMELNRISSHLVALATGGMELGAMT MF+GFR RE+IL +FE+ITGLRMN AY+RPGG Sbjct: 125 VLMMELNRISSHLVALATGGMELGAMTAMFLGFREREMILKVFEAITGLRMNHAYVRPGG 184 Query: 185 VAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGP 244 +AQDLP E+ + L LR+M +LLNEN IWKARTQ VGYLDL GCMALGITGP Sbjct: 185 LAQDLPDGAEQEVRDLLEILPGRLRDMENLLNENYIWKARTQGVGYLDLTGCMALGITGP 244 Query: 245 ILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL 304 +LR+TGL HDLR+++PYCGYENY+FDV+T CD+YGRY+IRVKEM ESIKI +QC+DRL Sbjct: 245 VLRATGLAHDLRRAQPYCGYENYDFDVVTHQDCDSYGRYLIRVKEMHESIKIAQQCVDRL 304 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 RPGP M++D+K+AWPADL GPDG+GNSP+HIAKIMG+SME LIHHFKLVTEG+RVPAGQ Sbjct: 305 RPGPVMVDDKKIAWPADLASGPDGLGNSPKHIAKIMGTSMEGLIHHFKLVTEGVRVPAGQ 364 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 VYVA+ESPRGELGVHMVSDGGTRPYRVH+RDPSFTNLQ+VAAM EG MVADLI AVASID Sbjct: 365 VYVAIESPRGELGVHMVSDGGTRPYRVHFRDPSFTNLQSVAAMCEGAMVADLIAAVASID 424 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 425 PVMGGVDR 432 >sp|Q5YWD0|NUOD_NOCFA Tax_Id=37329 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Nocardia farcinica] Length = 453 Score = 706 bits (1822), Expect = 0.0 Identities = 342/431 (79%), Positives = 380/431 (88%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T +TV+ GQDW+ + E GA ERIVVNMGPQHPSTHGVLRLILEIEGETV EAR Sbjct: 24 TTGDTVVTVSGQDWDTVTETLGGARE-ERIVVNMGPQHPSTHGVLRLILEIEGETVVEAR 82 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR W QGVTFVTRMDYLSPF+NETAYCLGVE+LLGIT++IPER + Sbjct: 83 CGIGYLHTGIEKNLEYRTWMQGVTFVTRMDYLSPFYNETAYCLGVERLLGITEQIPERAS 142 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 ++RV++MELNRISSHLV LATGGMELGA+TPM GFR RE+IL +FE+ITGLRMN AYIR Sbjct: 143 IVRVLLMELNRISSHLVCLATGGMELGALTPMLFGFRERELILDVFETITGLRMNHAYIR 202 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP DG ++ + + + + LR+M LL +N I+KARTQD+GYLDL GCMALGI Sbjct: 203 PGGLAQDLPDDGVAKVRELLDLMPKRLRDMEHLLTQNPIFKARTQDIGYLDLTGCMALGI 262 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRS GLPHDLRKS+PYCGYE YEFDV T GCD YGRY+IRV+EM ES+KIVEQCL Sbjct: 263 TGPVLRSAGLPHDLRKSQPYCGYETYEFDVPTTTGCDCYGRYLIRVEEMKESLKIVEQCL 322 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRLRPGP MIED+KLAWPADLK+G DG+GNSP HI +IMGSSME LIHHFKLVTEGIRVP Sbjct: 323 DRLRPGPVMIEDKKLAWPADLKLGADGLGNSPAHIGRIMGSSMEGLIHHFKLVTEGIRVP 382 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAM EGGMVAD+I AVA Sbjct: 383 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMCEGGMVADVIAAVA 442 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 443 SIDPVMGGVDR 453 >tr|C3JKF2|C3JKF2_RHOER Tax_Id=596309 (nuoD)SubName: Full=NADH dehydrogenase, d subunit; EC=1.6.99.5;[Rhodococcus erythropolis SK121] Length = 443 Score = 697 bits (1800), Expect = 0.0 Identities = 339/431 (78%), Positives = 382/431 (88%), Gaps = 2/431 (0%) Query: 4 TETVLVAGGQDWNEIVEAARGADPGE--RIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 TETV+ A GQDW++IV AA GE RIVVNMGPQHPSTHGVLRLILEIEGETV EAR Sbjct: 13 TETVVTASGQDWDDIVTAAARQRTGEAERIVVNMGPQHPSTHGVLRLILEIEGETVVEAR 72 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLL ITD+IPER Sbjct: 73 CGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLDITDDIPERAT 132 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVMMMELNRISSHLVALATGGMELGA+T M GFR RE+IL +FE+ITGLRMN AYIR Sbjct: 133 VIRVMMMELNRISSHLVALATGGMELGAVTAMLFGFRERELILDVFETITGLRMNHAYIR 192 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP ++ + + L + LR++ +L++N+IWKARTQ +GYLDL GCMALG+ Sbjct: 193 PGGLAQDLPDGSVAKVRELLKVLPKRLRDVELMLSDNSIWKARTQGIGYLDLTGCMALGV 252 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LR+TGLPHD R+++PYCGYENYEFDV+T DG D YGRY+IRV+EM ES+KIVEQCL Sbjct: 253 TGPVLRATGLPHDQRRAQPYCGYENYEFDVVTHDGSDCYGRYVIRVEEMKESLKIVEQCL 312 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 D+L+PGP M++D+K+AWPADL VGPDG+GNS +HIAKIM SSME LIHHFKLVTEGIRVP Sbjct: 313 DKLQPGPVMVDDKKIAWPADLAVGPDGLGNSQKHIAKIMESSMEGLIHHFKLVTEGIRVP 372 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQVYVAVESPRGELGVHMVSDGGTRPYRVH+RDPSFTNLQAVAAM EGGMV+D+I +VA Sbjct: 373 PGQVYVAVESPRGELGVHMVSDGGTRPYRVHFRDPSFTNLQAVAAMCEGGMVSDVIASVA 432 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 433 SIDPVMGGVDR 443 >sp|Q0S447|NUOD_RHOSR Tax_Id=101510 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Rhodococcus sp.] Length = 438 Score = 696 bits (1796), Expect = 0.0 Identities = 336/435 (77%), Positives = 379/435 (87%), Gaps = 7/435 (1%) Query: 5 ETVLVAGGQDWNEIVEAARGADPG-------ERIVVNMGPQHPSTHGVLRLILEIEGETV 57 +TV GQDW+++V+A + + G ERIVVNMGPQHPSTHGVLRLILEIEGETV Sbjct: 4 DTVFTVAGQDWDDVVDAVKASSGGGGSEGGEERIVVNMGPQHPSTHGVLRLILEIEGETV 63 Query: 58 TEARCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIP 117 TEARCGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLL ITDE+P Sbjct: 64 TEARCGIGYLHTGIEKNLEYRTWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLDITDEVP 123 Query: 118 ERVNVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNS 177 ER +VIRVM+MELNRISSHLVALATGGMELGA+T M GFR RE++L +FE ITGLRMN Sbjct: 124 ERASVIRVMLMELNRISSHLVALATGGMELGAVTAMLFGFRERELVLDVFEMITGLRMNH 183 Query: 178 AYIRPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCM 237 AYIRPGG++QDLP ++ + +A + + LR+M +LLN+N IWK RTQ +GYLDL GCM Sbjct: 184 AYIRPGGLSQDLPEGAVEKVRELLALMPERLRDMENLLNDNRIWKGRTQGIGYLDLTGCM 243 Query: 238 ALGITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIV 297 ALGITGP+LR+TGLPHDLRKS+PYCGYENYEFDV T GCDAYGRY+IRV EM ES+KIV Sbjct: 244 ALGITGPMLRATGLPHDLRKSQPYCGYENYEFDVSTDTGCDAYGRYLIRVDEMKESLKIV 303 Query: 298 EQCLDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEG 357 EQCLD+LRPGP M ED+K+AWPADL +GPDG+GNSP H+ +IM SSME+LIHHFKLVTEG Sbjct: 304 EQCLDKLRPGPIMAEDKKIAWPADLTLGPDGLGNSPGHVREIMDSSMESLIHHFKLVTEG 363 Query: 358 IRVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLI 417 RVP GQVYVAVESPRGELGVHMVSDGGTRP+RVH+RDPSFTNLQ+VAA EGGMVAD+I Sbjct: 364 FRVPPGQVYVAVESPRGELGVHMVSDGGTRPFRVHFRDPSFTNLQSVAATCEGGMVADVI 423 Query: 418 TAVASIDPVMGGVDR 432 AVASIDPVMGGVDR Sbjct: 424 AAVASIDPVMGGVDR 438 >tr|C0ZYJ7|C0ZYJ7_RHOE4 Tax_Id=234621 (nuoD)SubName: Full=NADH-quinone oxidoreductase chain D; EC=1.6.99.5;[Rhodococcus erythropolis] Length = 443 Score = 696 bits (1796), Expect = 0.0 Identities = 338/431 (78%), Positives = 382/431 (88%), Gaps = 2/431 (0%) Query: 4 TETVLVAGGQDWNEIVEAARGADPGE--RIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 TETV+ A GQDW++IV AA GE RIVVNMGPQHPSTHGVLRLILEIEGETV EAR Sbjct: 13 TETVVTASGQDWDDIVTAAARQRTGEAERIVVNMGPQHPSTHGVLRLILEIEGETVVEAR 72 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQGVTFVTRMDYLSPFFNETAYCLGVEKLL ITD+IPER Sbjct: 73 CGIGYLHTGIEKNLEFRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLDITDDIPERAT 132 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVMMMELNRISSHLVALATGGMELGA+T M GFR RE+IL +FE+ITGLRMN AYIR Sbjct: 133 VIRVMMMELNRISSHLVALATGGMELGAVTAMLFGFRERELILDVFETITGLRMNHAYIR 192 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP ++ + + L + LR++ +L++N+IWKARTQ +GYLDL GCMALG+ Sbjct: 193 PGGLAQDLPDGSVAKVRELLKVLPKRLRDVELMLSDNSIWKARTQGIGYLDLTGCMALGV 252 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LR+TGLPHD R+++PYCGYENYEFDV+T DG D YGRY+IRV+EM ES+KIVEQCL Sbjct: 253 TGPVLRATGLPHDQRRAQPYCGYENYEFDVVTHDGSDCYGRYVIRVEEMKESLKIVEQCL 312 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 D+L+PGP M++D+K+AWPADL VGPDG+GNS +HIAKIM SSME LIHHFKLVTEGIRVP Sbjct: 313 DKLQPGPVMVDDKKIAWPADLAVGPDGLGNSQKHIAKIMESSMEGLIHHFKLVTEGIRVP 372 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQVYVAVESPRGELGVHMVSDGGTRPYRVH+RDPSFTNLQAVAAM EGGMV+D+I +VA Sbjct: 373 PGQVYVAVESPRGELGVHMVSDGGTRPYRVHFRDPSFTNLQAVAAMCEGGMVSDVIASVA 432 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 433 SIDPVMGGVDR 443 >tr|C1AYM6|C1AYM6_RHOOB Tax_Id=632772 (nuoD)SubName: Full=NADH-quinone oxidoreductase chain D; EC=1.6.99.5;[Rhodococcus opacus] Length = 438 Score = 692 bits (1787), Expect = 0.0 Identities = 336/435 (77%), Positives = 379/435 (87%), Gaps = 7/435 (1%) Query: 5 ETVLVAGGQDWNEIVEAARGA--DPG-----ERIVVNMGPQHPSTHGVLRLILEIEGETV 57 +TV GQDW+E+V+A + A D G ERIVVNMGPQHPSTHGVLRLILEIEGETV Sbjct: 4 DTVFTVAGQDWDEVVDAVKAASDDAGSASGEERIVVNMGPQHPSTHGVLRLILEIEGETV 63 Query: 58 TEARCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIP 117 TEARCGIGYLHTGIEKNLEYR WTQGVTFVTRMDYLSPFFNETAYCLGVEKLL IT+++P Sbjct: 64 TEARCGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLDITEQVP 123 Query: 118 ERVNVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNS 177 +R +VIRVM+MELNRISSHLVALATGGMELGA+T M GFR RE++L +FE ITGLRMN Sbjct: 124 DRASVIRVMLMELNRISSHLVALATGGMELGAVTAMLFGFRERELVLDVFEFITGLRMNH 183 Query: 178 AYIRPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCM 237 AYIRPGG++QDLP ++ + + L + LR+M +LLNEN IWK RT+ +GYLDL GCM Sbjct: 184 AYIRPGGLSQDLPEGAVAKVRELLTVLPERLRDMENLLNENRIWKGRTEGIGYLDLTGCM 243 Query: 238 ALGITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIV 297 ALGITGP+LR+TGLPHDLRKS+PYCGYENYEF+V T GCDAYGRY+IRV EM ES+KIV Sbjct: 244 ALGITGPMLRATGLPHDLRKSQPYCGYENYEFEVSTDTGCDAYGRYLIRVDEMKESLKIV 303 Query: 298 EQCLDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEG 357 EQCLD+LRPGP M ED+K+AWPADL +GPDG+GNSP H+ +IM SSME+LIHHFKLVTEG Sbjct: 304 EQCLDKLRPGPIMAEDKKIAWPADLTLGPDGLGNSPGHVREIMDSSMESLIHHFKLVTEG 363 Query: 358 IRVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLI 417 RVP GQVYVAVESPRGELGVHMVSDGGTRPYRVH+RDPSFTNLQ+VAA EGGMVAD+I Sbjct: 364 FRVPPGQVYVAVESPRGELGVHMVSDGGTRPYRVHFRDPSFTNLQSVAATCEGGMVADVI 423 Query: 418 TAVASIDPVMGGVDR 432 AVASIDPVMGGVDR Sbjct: 424 AAVASIDPVMGGVDR 438 >sp|Q9XAQ7|NUOD2_STRCO Tax_Id=1902 (nuoD2)RecName: Full=NADH-quinone oxidoreductase subunit D 2; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D 2; AltName: Full=NDH-1 subunit D 2;[Streptomyces coelicolor] Length = 440 Score = 661 bits (1705), Expect = 0.0 Identities = 319/431 (74%), Positives = 368/431 (85%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+V++A AD ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 11 TTEGTVYTVTGGDWDEVVQSAARADD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 69 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQG TFVTRMDYL+PFFNE AYCLGVEKLLGI D+IP+R Sbjct: 70 CGIGYLHTGIEKNLEYRTWTQGTTFVTRMDYLTPFFNEAAYCLGVEKLLGIDDQIPDRAT 129 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 +IRV++MELNR+SSHLVA+ATGGMELGA T M GFR RE+IL ++E ITGLRMN AYIR Sbjct: 130 IIRVLLMELNRLSSHLVAIATGGMELGATTIMIYGFRDRELILDIYELITGLRMNHAYIR 189 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP +I + + + + L E L N I+KAR QDVGYLDLAGCMALG Sbjct: 190 PGGLAQDLPPGAVDQIREFVKKMNKNLPEYDKLATGNPIFKARMQDVGYLDLAGCMALGA 249 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRSTGLPHDLRK++PYCGYE Y+FDV TAD CD+YGR++IR++EM +S++IVEQCL Sbjct: 250 TGPVLRSTGLPHDLRKTQPYCGYETYDFDVPTADTCDSYGRFLIRLEEMRQSLRIVEQCL 309 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 310 DRLQPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 369 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 QVY AVESP+GELGVH+VSDGGTRP+RVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 370 PAQVYTAVESPKGELGVHVVSDGGTRPFRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 429 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 430 SIDPVMGGVDR 440 >tr|B4V2X3|B4V2X3_9ACTO Tax_Id=465541 SubName: Full=NADH dehydrogenase subunit D;[Streptomyces sp. Mg1] Length = 446 Score = 660 bits (1703), Expect = 0.0 Identities = 319/431 (74%), Positives = 366/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+EIV++A AD ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 17 TTEGTVYTVTGGDWDEIVQSAARADD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 75 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+PFFNETAYCLGVEKLLGITD+IP+R Sbjct: 76 CGIGYLHTGIEKNLEFRNWTQGTTFVTRMDYLTPFFNETAYCLGVEKLLGITDQIPDRAT 135 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 V+RV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL +FE ITGLRMN A+IR Sbjct: 136 VLRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDRELILDIFELITGLRMNHAFIR 195 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP ++ + +++ L E L N I+KAR QDVGYLDL GCMALG Sbjct: 196 PGGLAQDLPPGAVDQLRDFVKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGA 255 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRS GLPHDLRKS+PYCGYENYEFDV T + CD+YGR++IR++EM +S++IVEQCL Sbjct: 256 TGPILRSAGLPHDLRKSDPYCGYENYEFDVPTTESCDSYGRFLIRLEEMRQSLRIVEQCL 315 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 +RL PGP M+ D+K+AWPA L +GPDG+GNS +HI IMG+SMEALIHHFKLVTEG RVP Sbjct: 316 ERLEPGPVMVADKKIAWPAQLAMGPDGLGNSLDHIRTIMGTSMEALIHHFKLVTEGFRVP 375 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQ Y AVESP+GELGVH+VSDGGTRPYRVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 376 AGQAYAAVESPKGELGVHVVSDGGTRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 435 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 436 SIDPVMGGVDR 446 >sp|Q82DX8|NUOD1_STRAW Tax_Id=33903 (nuoD1)RecName: Full=NADH-quinone oxidoreductase subunit D 1; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D 1; AltName: Full=NDH-1 subunit D 1;[Streptomyces avermitilis] Length = 443 Score = 657 bits (1696), Expect = 0.0 Identities = 319/431 (74%), Positives = 366/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+V++A +D ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 14 TTEGTVYTVTGGDWDEVVQSAAKSDD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 72 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQG TFVTRMDYL+PFFNETAYCL VEKLLGI +EIP+R + Sbjct: 73 CGIGYLHTGIEKNLEYRTWTQGTTFVTRMDYLTPFFNETAYCLAVEKLLGIENEIPDRAS 132 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 +IRV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL ++E ITGLRMN AYIR Sbjct: 133 IIRVLLMELNRMSSHLVCIATGGMELGATTIMIYGFRDRELILDIYELITGLRMNHAYIR 192 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP +I + + +++ L E L N I+KAR QDVGYLDLAGCMALG Sbjct: 193 PGGLAQDLPPGAVDQIREFVKKMKKNLPEYDKLATGNPIFKARMQDVGYLDLAGCMALGA 252 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRS GLPHDLRKS+PYCGYE Y+FDV TAD CD+YGR++IR++EM +S++IVEQCL Sbjct: 253 TGPILRSAGLPHDLRKSQPYCGYETYDFDVPTADTCDSYGRFLIRLEEMRQSLRIVEQCL 312 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 313 DRLAPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 372 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQ Y AVESP+GELGVH VSDGGTRPYRVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 373 PGQTYSAVESPKGELGVHAVSDGGTRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 432 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 433 SIDPVMGGVDR 443 >tr|B5HDM5|B5HDM5_STRPR Tax_Id=457429 SubName: Full=NuoD;[Streptomyces pristinaespiralis ATCC 25486] Length = 440 Score = 656 bits (1692), Expect = 0.0 Identities = 318/431 (73%), Positives = 367/431 (85%), Gaps = 2/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T+ V GG DW+E+V +A AD ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 12 TEGPVYTVTGG-DWDEVVRSAAKADD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 69 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQG TFVTRMDYL+PFFNETAYCLGVE+LLGI D+IP+R Sbjct: 70 CGIGYLHTGIEKNLEYRTWTQGTTFVTRMDYLTPFFNETAYCLGVERLLGIEDQIPDRAT 129 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL ++E ITGLRMN AYIR Sbjct: 130 VIRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDRELILDIYELITGLRMNHAYIR 189 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP ++ + + +++ L E L N I+KAR QDVGYLDL GCMALG Sbjct: 190 PGGLAQDLPPGAVDQLREFVKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGA 249 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRSTGL HDLRK++PYCGYE Y+FDV TAD CD+YGR++IR++EM +S++IVEQCL Sbjct: 250 TGPILRSTGLAHDLRKTDPYCGYETYDFDVPTADTCDSYGRFLIRLEEMRQSLRIVEQCL 309 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 310 DRLEPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 369 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQ Y AVESP+GELGVH+VSDGGTRP+RVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 370 AGQAYAAVESPKGELGVHVVSDGGTRPFRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 429 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 430 SIDPVMGGVDR 440 >tr|C9YXV9|C9YXV9_STRSW Tax_Id=680198 (nuoD)SubName: Full=NuoD, NADH dehydrogenase subunit;[Streptomyces scabies] Length = 446 Score = 653 bits (1685), Expect = 0.0 Identities = 314/431 (72%), Positives = 364/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+ + A +D ERI+VNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 17 TTEGTVYTVTGGDWDEVAQTAARSDD-ERIIVNMGPQHPSTHGVLRLILEIDGETVTEAR 75 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLEYR WTQG TFVTRMDYL+PFFNETAYCL VEKLLGI DEIP+R Sbjct: 76 CGIGYLHTGIEKNLEYRTWTQGTTFVTRMDYLTPFFNETAYCLAVEKLLGIEDEIPDRAT 135 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 +IRV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL ++E ITGLRMN AYIR Sbjct: 136 IIRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDRELILDIYELITGLRMNHAYIR 195 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP +I + + + + L E L N I+KAR QD+G+LDLAGCMALG Sbjct: 196 PGGLAQDLPPGAVDQIREFVKKMEKNLPEYDKLATGNPIFKARMQDIGHLDLAGCMALGA 255 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRS GLPHDLRK++PYCGYE Y+FDV TAD CD+YGR++IR++EM +S++IVEQCL Sbjct: 256 TGPILRSAGLPHDLRKAQPYCGYETYDFDVPTADTCDSYGRFLIRLEEMRQSLRIVEQCL 315 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 316 DRLQPGPVMVGDKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 375 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQ Y AVESP+GELGVH+VSDGGTRP+RVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 376 PGQAYAAVESPKGELGVHVVSDGGTRPFRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 435 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 436 SIDPVMGGVDR 446 >sp|B1W516|NUOD1_STRGG Tax_Id=455632 (nuoD1)RecName: Full=NADH-quinone oxidoreductase subunit D 1; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D 1; AltName: Full=NDH-1 subunit D 1;[Streptomyces griseus subsp. griseus] Length = 440 Score = 652 bits (1683), Expect = 0.0 Identities = 312/431 (72%), Positives = 364/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+VE+A +D ERI+VNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 11 TTEGTVYTVTGGDWDEVVESAVKSDD-ERIIVNMGPQHPSTHGVLRLILEIDGETVTEAR 69 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+PFFNETAYCLGVEKLLGI D+IP+R Sbjct: 70 CGIGYLHTGIEKNLEFRNWTQGTTFVTRMDYLTPFFNETAYCLGVEKLLGIEDQIPDRAT 129 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 V+RV++MELNR+SSHLV +ATGGMELGA T M GFR RE++L LFE TGLRMN A++R Sbjct: 130 VLRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDRELVLDLFELFTGLRMNHAFVR 189 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP + + I +++ L E L N I+KAR QDVGYLDL GCMALG Sbjct: 190 PGGLAQDLPPGAVDRLREFIKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCMALGA 249 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRS GLPHDLRKS+PYCGYE Y+F+V TAD CD+YGR++IR++EM +S++I+EQC+ Sbjct: 250 TGPVLRSAGLPHDLRKSDPYCGYETYDFEVPTADTCDSYGRFLIRLEEMRQSLRIIEQCI 309 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL PGP M+ D+K+AWPA L +GPDG+GNS +HI IMG+SMEALIHHFKLVTEG RVP Sbjct: 310 DRLEPGPVMVADKKIAWPAQLALGPDGLGNSLDHIRNIMGTSMEALIHHFKLVTEGFRVP 369 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQVY AVESP+GELGVH+VSDGGTRPYRVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 370 PGQVYTAVESPKGELGVHVVSDGGTRPYRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 429 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 430 SIDPVMGGVDR 440 >tr|C2AVH2|C2AVH2_TSUPA Tax_Id=521096 SubName: Full=NADH dehydrogenase subunit D; EC=1.6.5.3;[Tsukamurella paurometabola DSM 20162] Length = 426 Score = 652 bits (1683), Expect = 0.0 Identities = 322/423 (76%), Positives = 358/423 (84%), Gaps = 3/423 (0%) Query: 10 AGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGYLHT 69 A G DW+EI A G ERIVVNMGPQHPSTHGVLRLILE++GETVTEARCGIG+LHT Sbjct: 7 AMGSDWDEIAAEAVGH---ERIVVNMGPQHPSTHGVLRLILELDGETVTEARCGIGFLHT 63 Query: 70 GIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVMMME 129 GIEKNLE+R WTQG TFVTRMDYL+P FNETAYCL VEKLLGITDEIPER VIRV+MME Sbjct: 64 GIEKNLEFRTWTQGTTFVTRMDYLAPLFNETAYCLAVEKLLGITDEIPERATVIRVLMME 123 Query: 130 LNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVAQDL 189 LNR++S LVALATGGMELGA++PM GF RE IL++FE+ITGLRMN AYIRPGGVA DL Sbjct: 124 LNRVTSDLVALATGGMELGAVSPMLKGFEIREQILNVFETITGLRMNHAYIRPGGVAADL 183 Query: 190 PPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPILRST 249 P D +I + + L L M +L N IW ART+DVGYLDL G MALGITGP+LRST Sbjct: 184 PDDALPQIRELLRTLPPQLDSMAGMLTGNPIWMARTKDVGYLDLTGAMALGITGPVLRST 243 Query: 250 GLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRLRPGPT 309 GLPHDLR+SEPYCGYE+YEFDVIT GCD YGRY+IRV EM +S++IVEQCLDRL PGP Sbjct: 244 GLPHDLRRSEPYCGYEDYEFDVITDTGCDCYGRYLIRVHEMTQSLRIVEQCLDRLAPGPV 303 Query: 310 MIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQVYVAV 369 MI+D +L WPADL VGPDG+GNS HIA+IMG SME+LIHHFKLVTEG VPAGQV V+V Sbjct: 304 MIDDARLGWPADLTVGPDGLGNSRAHIAEIMGESMESLIHHFKLVTEGFAVPAGQVAVSV 363 Query: 370 ESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASIDPVMGG 429 E+PRGEL VH VSDGGTRPYRVH+RDPSFTNLQAVAAM EGGMV+D+I AVASIDPVMGG Sbjct: 364 EAPRGELLVHAVSDGGTRPYRVHFRDPSFTNLQAVAAMCEGGMVSDVIAAVASIDPVMGG 423 Query: 430 VDR 432 VDR Sbjct: 424 VDR 426 >tr|C9N6C5|C9N6C5_9ACTO Tax_Id=591167 SubName: Full=NADH dehydrogenase I, D subunit; EC=1.6.99.5;[Streptomyces flavogriseus ATCC 33331] Length = 452 Score = 649 bits (1674), Expect = 0.0 Identities = 311/431 (72%), Positives = 364/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+VE+A +D ERI+VNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 23 TTEGTVYTVTGGDWDEVVESAAKSDD-ERIIVNMGPQHPSTHGVLRLILEIDGETVTEAR 81 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+PFFNE AYCLGVEKLLGI D++P+R Sbjct: 82 CGIGYLHTGIEKNLEFRNWTQGTTFVTRMDYLTPFFNEAAYCLGVEKLLGIEDQVPDRAT 141 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 V+RV++MELNRISSHLV +ATGGMELGA T M GFR RE++L LFE ITGLRMN A+IR Sbjct: 142 VLRVLLMELNRISSHLVCIATGGMELGATTIMIYGFRDRELVLDLFELITGLRMNHAFIR 201 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP + + + +++ L E L N I+KAR QDVGYLDL GC+ALG Sbjct: 202 PGGLAQDLPMGAVDRLREFVKTMKKNLPEYDKLATGNPIFKARMQDVGYLDLTGCVALGA 261 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRS GLPHDLRK++PYCGYE Y+FDV TAD CDAYGR++IR++EM +S++IVEQCL Sbjct: 262 TGPVLRSAGLPHDLRKTDPYCGYETYDFDVPTADTCDAYGRFLIRLEEMRQSLRIVEQCL 321 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 +RL PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 322 ERLEPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 381 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQ Y A+ESP+GELGVH+VSDGGTRP+RVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 382 AGQAYTALESPKGELGVHVVSDGGTRPFRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 441 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 442 SIDPVMGGVDR 452 >tr|B5HQD2|B5HQD2_9ACTO Tax_Id=463191 SubName: Full=NADH dehydrogenase subunit D;[Streptomyces sviceus ATCC 29083] Length = 440 Score = 648 bits (1672), Expect = 0.0 Identities = 313/431 (72%), Positives = 364/431 (84%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+V++A AD ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 11 TTEGTVYTVTGGDWDEVVQSAAKADD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 69 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+ FFNETAYCL VEKLLGI D+I +R Sbjct: 70 CGIGYLHTGIEKNLEFRTWTQGTTFVTRMDYLTSFFNETAYCLAVEKLLGIEDQITDRAT 129 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 +IRV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL ++E ITGLRMN AYIR Sbjct: 130 LIRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDREMILDIYELITGLRMNHAYIR 189 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLPP I + + +++ L E L N I+KAR QDVGYLDLAGCMALG Sbjct: 190 PGGLAQDLPPGAVDHIREFVKKMKKNLPEYDKLATGNPIFKARMQDVGYLDLAGCMALGA 249 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRSTGLPHDLRK++PYCGYE ++FD+ TAD CD+YGR++IR++EM +S++I+EQCL Sbjct: 250 TGPILRSTGLPHDLRKAQPYCGYETFDFDIPTADTCDSYGRFLIRLEEMRQSLRIIEQCL 309 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL+PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 310 DRLQPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 369 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQ Y AVESP+GELGVH VSDGGTRP+RVH+RDPSFTNLQA+AAM EGG VAD+I AVA Sbjct: 370 PGQAYAAVESPKGELGVHAVSDGGTRPFRVHFRDPSFTNLQAMAAMCEGGQVADVIVAVA 429 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 430 SIDPVMGGVDR 440 >tr|Q0QMN9|Q0QMN9_9ACTO Tax_Id=358765 SubName: Full=Menaquinone oxidoreductase;[Streptomyces sp. Eco86] Length = 445 Score = 640 bits (1651), Expect = 0.0 Identities = 305/431 (70%), Positives = 362/431 (83%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+EIV +A A+ ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 16 TTEGTVYTVTGGDWDEIVSSAARAND-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 74 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEK EYR WTQG T VTRMDYL+ FFNETAYCL VEKLLGI D++P+R Sbjct: 75 CGIGYLHTGIEKQTEYRTWTQGTTLVTRMDYLTSFFNETAYCLAVEKLLGIEDQVPDRAT 134 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 V+RV++MELNRISSHLVA+ATGGMELGA T M GFR RE+IL +E ITGLRMN A+IR Sbjct: 135 VVRVLLMELNRISSHLVAIATGGMELGASTVMIYGFRDRELILDAYELITGLRMNHAFIR 194 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP ++ + + LR+ L E L + N ++KAR QDV +LDL GCMALG+ Sbjct: 195 PGGLAQDLPAGAVDQLRELVGTLRKNLPEYDKLASGNPVFKARMQDVAHLDLTGCMALGV 254 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILRSTGLPHDLRK++PYCGYE Y+FDV T D CDAYGR++IR++EM +S++IV+QCL Sbjct: 255 TGPILRSTGLPHDLRKAQPYCGYETYDFDVPTTDTCDAYGRFLIRLEEMRQSLRIVDQCL 314 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 DRL PGP M+ D+K+AWPA L +GPDG+GNSP+HI +IMG+SME+LIHHFKLVTEG RVP Sbjct: 315 DRLEPGPVMVADKKIAWPAQLALGPDGLGNSPDHIKQIMGTSMESLIHHFKLVTEGFRVP 374 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 GQ+YV+VESP+GELG H+VSDGGTRP+RVH+RDPSFTNLQA+AAM+EGG VAD+I +A Sbjct: 375 PGQIYVSVESPKGELGAHVVSDGGTRPFRVHFRDPSFTNLQAMAAMAEGGQVADVIVVIA 434 Query: 422 SIDPVMGGVDR 432 SIDPV+GGVDR Sbjct: 435 SIDPVLGGVDR 445 >tr|B5GWF0|B5GWF0_STRCL Tax_Id=443255 SubName: Full=NADH dehydrogenase subunit D;[Streptomyces clavuligerus ATCC 27064] Length = 448 Score = 640 bits (1651), Expect = 0.0 Identities = 308/431 (71%), Positives = 361/431 (83%), Gaps = 1/431 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+ E+A AD ERIVVNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 19 TTEGTVYTVTGGDWDEVAESAARADD-ERIVVNMGPQHPSTHGVLRLILEIDGETVTEAR 77 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+PFFNE AYCL VEKLLGI D+IP+R + Sbjct: 78 CGIGYLHTGIEKNLEFRNWTQGTTFVTRMDYLTPFFNEAAYCLAVEKLLGIEDQIPDRAS 137 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRV++MELNR+SSHLV +ATGGMELGA T M GFR RE+IL L+E ITGLRMN AYIR Sbjct: 138 VIRVLLMELNRLSSHLVCIATGGMELGATTIMIYGFRDRELILDLYELITGLRMNHAYIR 197 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP + + + +++ L E L N I+KAR Q +G+LDL GCMALG Sbjct: 198 PGGLAQDLPAGAVDRLREFVKTMKKNLPEYDKLATGNPIFKARMQGIGHLDLTGCMALGA 257 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILR+ GLPHDLRK++PYCGYE Y+F+V TAD CD+YGR++IR++EM +S++IVEQC+ Sbjct: 258 TGPILRAAGLPHDLRKTDPYCGYETYDFEVPTADTCDSYGRFLIRLEEMRQSLRIVEQCV 317 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVP 361 +RL PGP M+ D+K+AWPA L +GPDG+GNS +HI KIMG+SMEALIHHFKLVTEG RVP Sbjct: 318 ERLAPGPVMVADKKIAWPAQLALGPDGLGNSLDHIKKIMGTSMEALIHHFKLVTEGFRVP 377 Query: 362 AGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVA 421 AGQ Y AVESP+GELG H+VSDGGTRPYRVH+RDPSFTNLQ++AAM EGG VAD+I AVA Sbjct: 378 AGQAYAAVESPKGELGAHVVSDGGTRPYRVHFRDPSFTNLQSMAAMCEGGQVADVIVAVA 437 Query: 422 SIDPVMGGVDR 432 SIDPVMGGVDR Sbjct: 438 SIDPVMGGVDR 448 >tr|B5GCW9|B5GCW9_9ACTO Tax_Id=465543 SubName: Full=NuoD;[Streptomyces sp. SPB74] Length = 442 Score = 637 bits (1642), Expect = e-180 Identities = 307/432 (71%), Positives = 360/432 (83%), Gaps = 2/432 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TV G DW+E+VEAA AD ERI+VNMGPQHPSTHGVLRLILEI+GETVTEAR Sbjct: 12 TTEGTVYTVTGGDWDEVVEAAAKADD-ERIIVNMGPQHPSTHGVLRLILEIDGETVTEAR 70 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 CGIGYLHTGIEKNLE+R WTQG TFVTRMDYL+PFFNETAYCLGVE+LLGI D++P+R + Sbjct: 71 CGIGYLHTGIEKNLEFRTWTQGTTFVTRMDYLTPFFNETAYCLGVERLLGIEDDVPDRAS 130 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 V+RV++MELNRISSHLVA+ATGGMELG+ T M GFR RE+ L LFE TGLRMN A+IR Sbjct: 131 VVRVLLMELNRISSHLVAIATGGMELGSTTIMIYGFRDRELCLDLFELFTGLRMNHAFIR 190 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGG+AQDLP +A+ + +R L E L N I++AR +DVG+LDL GCMALG Sbjct: 191 PGGLAQDLPAGSLDALAEFVKTMRHNLTEYDKLATGNPIFRARMKDVGHLDLTGCMALGA 250 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGP+LRS GLPHDLRK++PYCGYE Y+FD+ T DGCD+YGR++IR+ EM ES++++EQC Sbjct: 251 TGPVLRSAGLPHDLRKAQPYCGYETYDFDIPTDDGCDSYGRFLIRMAEMRESLRVIEQCA 310 Query: 302 DRLR-PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 +RLR PGP M+ D+K+AWPA L GPDG+GNS +HI +IMG+SMEALIHHFKLVTEG RV Sbjct: 311 ERLREPGPVMVADKKIAWPAQLAQGPDGIGNSLDHIREIMGTSMEALIHHFKLVTEGFRV 370 Query: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 P GQ Y AVES +GELG H+VSDGGTRP+RVH+RDPSFTNLQAVAAM EGG VAD+I AV Sbjct: 371 PPGQAYAAVESAKGELGAHVVSDGGTRPFRVHFRDPSFTNLQAVAAMCEGGQVADVIVAV 430 Query: 421 ASIDPVMGGVDR 432 ASIDPVMGGVDR Sbjct: 431 ASIDPVMGGVDR 442 >sp|Q47LE7|NUOD_THEFY Tax_Id=269800 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Thermobifida fusca] Length = 434 Score = 632 bits (1630), Expect = e-179 Identities = 306/433 (70%), Positives = 359/433 (82%), Gaps = 3/433 (0%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEAR 61 T TET + A G DW+E+V AA+ + +R+V+NMGPQHPSTHGVLRLIL ++GETVTEAR Sbjct: 3 TPTETYVDASGGDWDEVVAAAQRSQT-DRLVINMGPQHPSTHGVLRLILTLDGETVTEAR 61 Query: 62 CGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVN 121 GIGYLHTGIEKN+EYR WTQG TFVTRMDYL+P FNETAYCL VEKLLGITD++PER N Sbjct: 62 VGIGYLHTGIEKNMEYRTWTQGTTFVTRMDYLTPLFNETAYCLAVEKLLGITDQVPERAN 121 Query: 122 VIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIR 181 VIRVMMMELNRISSH VA+AT GMELGA T M GFR RE++L +FE +TGLRMN AYIR Sbjct: 122 VIRVMMMELNRISSHFVAMATFGMELGATTVMTNGFREREMVLDIFEMVTGLRMNHAYIR 181 Query: 182 PGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGI 241 PGGVAQDLPP ++ + + ++ + L++M LL+ N I+ ART+DV YLD+ GC+ALG+ Sbjct: 182 PGGVAQDLPPGTVGKVRELLTEMPKRLKDMRKLLDANPIYLARTRDVAYLDVTGCLALGV 241 Query: 242 TGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCL 301 TGPILR+ GLP DLRK++PYCGYENYEFD+ +DG D Y RY +R+ E+ +S+KI+EQCL Sbjct: 242 TGPILRAAGLPWDLRKAKPYCGYENYEFDIPVSDGADVYARYRVRMAEIEQSLKIIEQCL 301 Query: 302 DRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIM--GSSMEALIHHFKLVTEGIR 359 D+L+PGP MIED K+ WPA L +GPDGMGN+P HIA IM G SMEALIHHFKLVTEG R Sbjct: 302 DKLKPGPVMIEDPKIGWPAQLALGPDGMGNAPSHIAHIMGKGGSMEALIHHFKLVTEGFR 361 Query: 360 VPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITA 419 VP GQ Y AVESP+GELG VSDGG RPYRVH+RDPSFTNLQAVAAM EGG VAD+I A Sbjct: 362 VPPGQAYAAVESPKGELGCFAVSDGGPRPYRVHFRDPSFTNLQAVAAMCEGGTVADVIAA 421 Query: 420 VASIDPVMGGVDR 432 VASIDPVMGGVDR Sbjct: 422 VASIDPVMGGVDR 434 >tr|A3THJ0|A3THJ0_9MICO Tax_Id=313589 SubName: Full=NADH dehydrogenase delta subunit; EC=1.6.5.3;[Janibacter sp. HTCC2649] Length = 465 Score = 631 bits (1627), Expect = e-179 Identities = 311/432 (71%), Positives = 357/432 (82%), Gaps = 3/432 (0%) Query: 3 DTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARC 62 D V A G DW ++V+ A ERIVVNMGPQHPSTHGVLRLILE++GETVTEAR Sbjct: 35 DGARVFNATGGDWGDLVDEATALHE-ERIVVNMGPQHPSTHGVLRLILELDGETVTEARA 93 Query: 63 GIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNV 122 GIGYLHTGIEKN+EYR W QGVTF TRMDYL+P F ET YCLG+E+LLGI D+IPER ++ Sbjct: 94 GIGYLHTGIEKNMEYRNWVQGVTFCTRMDYLTPMFQETTYCLGIERLLGIEDQIPERASI 153 Query: 123 IRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRP 182 IRV+MMEL RI+SHLV L TGGMELGA T M VGFR RE IL +FE++TGLRMN+AYIRP Sbjct: 154 IRVLMMELTRINSHLVCLGTGGMELGATTVMTVGFRERERILRIFEAVTGLRMNNAYIRP 213 Query: 183 GGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGIT 242 GGVAQDLP +I + +LRQ L E+ LLNEN I K RT++VGYLDLAGCMALGIT Sbjct: 214 GGVAQDLPHGCLDQINGTVGELRQGLHELELLLNENPILKGRTKNVGYLDLAGCMALGIT 273 Query: 243 GPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLD 302 GPILRSTGLPHDLRKS+PYCGYE Y+F+VIT G DAY R IR+ EM+ES+KIVEQC++ Sbjct: 274 GPILRSTGLPHDLRKSQPYCGYETYDFEVITRTGADAYDRIRIRLDEMYESLKIVEQCVE 333 Query: 303 RLR--PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 RL+ GP M+ED+K+AWPA L VG DG GNS +HI +IMG+SME+LIHHFKLVTEG RV Sbjct: 334 RLKKVTGPVMVEDKKIAWPAQLSVGSDGQGNSLDHIREIMGTSMESLIHHFKLVTEGFRV 393 Query: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 PAGQ YV +ESP+GELG H+VSDGGTRPYR H+RDPSF NLQAVAA+SEGG VAD+I AV Sbjct: 394 PAGQAYVPIESPKGELGCHIVSDGGTRPYRAHFRDPSFNNLQAVAALSEGGQVADVIVAV 453 Query: 421 ASIDPVMGGVDR 432 ASIDPVMGGVDR Sbjct: 454 ASIDPVMGGVDR 465 >tr|C7QCP9|C7QCP9_CATAD Tax_Id=479433 SubName: Full=NADH dehydrogenase I, D subunit; EC=1.6.99.5;[Catenulispora acidiphila] Length = 445 Score = 622 bits (1604), Expect = e-176 Identities = 311/427 (72%), Positives = 349/427 (81%), Gaps = 5/427 (1%) Query: 9 VAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGYLH 68 VAGG DW+EI+ A P ERIVVNMGPQHPSTHGVLRLILEI+GETVTEARCGIGYLH Sbjct: 21 VAGG-DWDEIL-AGLQESPEERIVVNMGPQHPSTHGVLRLILEIDGETVTEARCGIGYLH 78 Query: 69 TGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVMMM 128 TGIEKN EYR W QG TFVTRMDYL+P FNE AYCL VEKLL I ++IPER +VIRV+MM Sbjct: 79 TGIEKNTEYRNWVQGTTFVTRMDYLTPLFNEAAYCLAVEKLLDIEEQIPERASVIRVLMM 138 Query: 129 ELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVAQD 188 ELNRISSHLV LATGGME+GA+T M GFR RE L LFE ITGLRMN AYIRPGGVAQD Sbjct: 139 ELNRISSHLVCLATGGMEMGALTMMTAGFREREETLDLFEFITGLRMNHAYIRPGGVAQD 198 Query: 189 LPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPILRS 248 LPP +I I +R+ + L NEN I++ RT+ VG+LDLAGCMALGITGP+LRS Sbjct: 199 LPPGAVDKIGNYIKLMRKRFPDYAKLCNENPIFRGRTEGVGHLDLAGCMALGITGPVLRS 258 Query: 249 TGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL---R 305 TG PHDLRKSEPYCGYE Y+F+V T D DAYGRY +R+ EM+ES++IVEQCLDR+ + Sbjct: 259 TGHPHDLRKSEPYCGYETYDFEVATWDTSDAYGRYRVRLTEMYESLRIVEQCLDRIQRTQ 318 Query: 306 PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQV 365 P M+ED+K+AWPA L +G DGMGNS +HI IMG SMEALIHHFKLVTEG VPAGQ Sbjct: 319 GHPVMVEDKKIAWPAQLALGSDGMGNSLDHIRHIMGGSMEALIHHFKLVTEGFHVPAGQA 378 Query: 366 YVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASIDP 425 Y AVES +GELGVH VSDGGTRPYRVH+RDPSFTNLQA AAM EGG +AD+I AVAS+DP Sbjct: 379 YAAVESAKGELGVHAVSDGGTRPYRVHFRDPSFTNLQATAAMCEGGQLADVIVAVASLDP 438 Query: 426 VMGGVDR 432 VMGGVDR Sbjct: 439 VMGGVDR 445 >sp|A1SE30|NUOD_NOCSJ Tax_Id=196162 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Nocardioides sp.] Length = 446 Score = 614 bits (1584), Expect = e-174 Identities = 296/429 (68%), Positives = 346/429 (80%), Gaps = 3/429 (0%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 V GQDW+ I E + ERIVVNMGPQHPSTHGVLRLILE+EGETVTEAR GIGY Sbjct: 18 VFTVTGQDWDSIAEGLAEDEAQERIVVNMGPQHPSTHGVLRLILELEGETVTEARAGIGY 77 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEKN+EYR WTQGVTF TRMDYLSPFFNE Y LG+E+LL I D +PE+ V+RV+ Sbjct: 78 LHTGIEKNMEYRTWTQGVTFCTRMDYLSPFFNEMTYVLGIERLLDIEDRVPEKAQVMRVL 137 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 +MELNRISSHLVA+ATGGMELGA+T M +GFR RE++L LFE ITGLRMN A+IRPGGVA Sbjct: 138 LMELNRISSHLVAIATGGMELGALTVMTIGFRERELVLDLFELITGLRMNHAFIRPGGVA 197 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 QD+PP EI +A +++ L E DL N N I+K R + +G+LDLAGC+ALG+TGP+L Sbjct: 198 QDMPPGALDEIRGFVALMKKRLPEYADLCNANPIFKGRLEGIGHLDLAGCLALGLTGPVL 257 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRLR- 305 RSTG P DLRK++PYCGYE Y+FDV T D D+YGR+ IR+ EMWES++I+EQ DRL Sbjct: 258 RSTGYPWDLRKTQPYCGYETYDFDVQTWDTSDSYGRFRIRLNEMWESLRIIEQAADRLAG 317 Query: 306 --PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAG 363 P MIED+K+ WP+ L +G DGMGNS +HI IMG SMEALIHHFKLVTEG RVP G Sbjct: 318 LDGAPVMIEDKKIGWPSQLAIGSDGMGNSLDHIRHIMGESMEALIHHFKLVTEGFRVPPG 377 Query: 364 QVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASI 423 Q YV VESPRGELG H+VSDGGTRP+R H+RDPSFTNLQA + M+EGGMVAD+I A+ASI Sbjct: 378 QAYVPVESPRGELGAHVVSDGGTRPFRAHFRDPSFTNLQATSVMAEGGMVADVIVAIASI 437 Query: 424 DPVMGGVDR 432 DPVMGGVDR Sbjct: 438 DPVMGGVDR 446 >tr|C1YIA9|C1YIA9_NOCDA Tax_Id=446468 SubName: Full=NADH dehydrogenase subunit D; EC=1.6.5.3;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 431 Score = 613 bits (1582), Expect = e-173 Identities = 297/432 (68%), Positives = 354/432 (81%), Gaps = 1/432 (0%) Query: 1 MTDTETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEA 60 MT TE + A G DW++++E A+ A ER+VVNMGPQHPSTHGVLRLIL ++GET TEA Sbjct: 1 MTITEDYIDASGGDWDDVIEKAQ-ATSAERLVVNMGPQHPSTHGVLRLILTLDGETCTEA 59 Query: 61 RCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERV 120 R GIGYLHTGIEKN+EYR WTQG TFVTRMDYL+P FNE AYCL VEKLLGI D +PER Sbjct: 60 RVGIGYLHTGIEKNMEYRTWTQGTTFVTRMDYLTPLFNEAAYCLAVEKLLGIEDRVPERA 119 Query: 121 NVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYI 180 +VIRVMMMELNR++SH VA+AT GMELGA T M GFR RE+IL +FE +TGLRMN AYI Sbjct: 120 SVIRVMMMELNRMASHFVAMATFGMELGATTVMTNGFREREMILDIFELVTGLRMNHAYI 179 Query: 181 RPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALG 240 RPGGVAQDLPP ++ + + ++ + + M LL+EN ++ ART+DV +L+L GCMALG Sbjct: 180 RPGGVAQDLPPGAAGKVRELLKEMPKRIAVMRKLLDENPVYLARTKDVAHLNLPGCMALG 239 Query: 241 ITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQC 300 +TGP+LR++GL DLRK++PYCGYE YEFDV +DG D Y RY +R+ EM ES+KI+EQC Sbjct: 240 VTGPLLRASGLAWDLRKAKPYCGYEGYEFDVPVSDGGDVYARYRVRMAEMEESLKIIEQC 299 Query: 301 LDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRV 360 LD+L+PGP MI+D K+ WPA L +GPDG+GNSP+HIA IM SMEALIHHFKLVTEG RV Sbjct: 300 LDKLQPGPVMIQDAKIGWPAKLALGPDGLGNSPDHIAHIMSGSMEALIHHFKLVTEGFRV 359 Query: 361 PAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAV 420 PAGQ Y AVES +GELG + VSDG TRP+RVH+RDPSFT+LQAVAAM EGG VAD+I AV Sbjct: 360 PAGQAYAAVESAKGELGCYAVSDGSTRPHRVHFRDPSFTHLQAVAAMCEGGTVADVIAAV 419 Query: 421 ASIDPVMGGVDR 432 ASIDPVMGGVDR Sbjct: 420 ASIDPVMGGVDR 431 >tr|D1A468|D1A468_THECU Tax_Id=471852 SubName: Full=NADH dehydrogenase I, D subunit; EC=1.6.99.5;[Thermomonospora curvata DSM 43183] Length = 449 Score = 613 bits (1581), Expect = e-173 Identities = 297/428 (69%), Positives = 348/428 (81%), Gaps = 2/428 (0%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 VL G DW+++V AA ER+VVNMGPQHPSTHGVLRLIL ++GETV E R IGY Sbjct: 22 VLGVQGGDWDQVVTAAAEDGSDERLVVNMGPQHPSTHGVLRLILTLDGETVDECRVNIGY 81 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEKN+E+R W QG F TRMDYLSP FNETAYC+ VEKLLGITD+IPER +IRVM Sbjct: 82 LHTGIEKNMEFRTWAQGPAFCTRMDYLSPIFNETAYCMAVEKLLGITDQIPERAQIIRVM 141 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 MMELNRISSHLVA+AT G+ELGA T M GF RE L +FE ITGLRMN AY+RPGGVA Sbjct: 142 MMELNRISSHLVAIATFGLELGATTVMLNGFIEREYALDVFEEITGLRMNMAYVRPGGVA 201 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 QD+ G T++ + + + ++++ L++ N ++ ART+D+ YLDL GCMALG+TGP+L Sbjct: 202 QDIGHGGFTKVREFLDRMPGRIKQLRKLMDANPVFLARTKDIAYLDLEGCMALGVTGPVL 261 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRL-- 304 R+TGLP DLRK++PYCGYE YEF+V T D CD YGRY++R++EM ES+KI+EQCLDRL Sbjct: 262 RATGLPWDLRKTQPYCGYEKYEFEVATQDTCDVYGRYLVRMQEMEESLKIIEQCLDRLSV 321 Query: 305 RPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQ 364 GP MIED+K+ WPA L +G DGMGNSP HIA IMG+SMEALIHHFKLVTEG RVPAGQ Sbjct: 322 TKGPVMIEDKKIGWPAQLAIGTDGMGNSPRHIAHIMGTSMEALIHHFKLVTEGFRVPAGQ 381 Query: 365 VYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASID 424 Y AVESPRGELGVH+VSDGG RPYRVH+RDPSFTNLQA AM+EGGMVAD+I AVASID Sbjct: 382 AYAAVESPRGELGVHVVSDGGPRPYRVHFRDPSFTNLQATPAMTEGGMVADVIAAVASID 441 Query: 425 PVMGGVDR 432 PVMGGVDR Sbjct: 442 PVMGGVDR 449 >tr|C1WGP2|C1WGP2_9ACTO Tax_Id=479435 SubName: Full=NADH dehydrogenase subunit D; EC=1.6.5.3;[Kribbella flavida DSM 17836] Length = 445 Score = 610 bits (1574), Expect = e-173 Identities = 300/429 (69%), Positives = 347/429 (80%), Gaps = 4/429 (0%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 V GQDW+ +V A G +P ERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY Sbjct: 18 VFTVTGQDWDSVV-AGLGEEPEERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 76 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEKN+E+R WTQGVTF TRMDYLSPF+NE AYCL VE+LLGI D+IPE+ NV+RV+ Sbjct: 77 LHTGIEKNMEFRSWTQGVTFCTRMDYLSPFYNEAAYCLAVERLLGIEDQIPEKANVMRVL 136 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 +MELNRISSHLV +ATGGME+GA+T M +GFR RE+ L LFE ITGLRMN A+IRPGGVA Sbjct: 137 LMELNRISSHLVCIATGGMEIGALTVMTIGFREREMTLDLFELITGLRMNHAFIRPGGVA 196 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 QDLPP +I I + + L E +L N N I+K+R QDVGYLDL GCMALGI+GP L Sbjct: 197 QDLPPGALDKIRDYITWMNKHLPEYAELCNANPIFKSRLQDVGYLDLTGCMALGISGPPL 256 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRLR- 305 R+TG DLRK++PYCGYE Y+FDV T D D+YGR+ +R++EM ES+KIVEQC DRL Sbjct: 257 RATGYGLDLRKTQPYCGYETYDFDVPTWDTADSYGRFRVRLQEMHESLKIVEQCADRLAR 316 Query: 306 --PGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAG 363 P M+ D+K+ WP+ L VG DGMGNS +HI IMG SMEALIHHFKLVTEG RVPAG Sbjct: 317 MDGEPVMVADKKIGWPSQLAVGNDGMGNSLDHIKHIMGESMEALIHHFKLVTEGFRVPAG 376 Query: 364 QVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASI 423 Q YVAVESPRGELG H+VSDGGT+PYR H+RDPSF NLQA+ + EG VAD+I AVAS+ Sbjct: 377 QAYVAVESPRGELGCHLVSDGGTKPYRAHFRDPSFANLQAMPILCEGAQVADVIVAVASL 436 Query: 424 DPVMGGVDR 432 DPVMGGVDR Sbjct: 437 DPVMGGVDR 445 >tr|C4RKR1|C4RKR1_9ACTO Tax_Id=219305 SubName: Full=NADH-quinone oxidoreductase, D1 subunit;[Micromonospora sp. ATCC 39149] Length = 441 Score = 599 bits (1545), Expect = e-169 Identities = 300/433 (69%), Positives = 344/433 (79%), Gaps = 6/433 (1%) Query: 2 TDTETVLVAGGQDWNEIVEAARGADP--GERIVVNMGPQHPSTHGVLRLILEIEGETVTE 59 T+ + V GG DW+++V G DP ERIVVNMGPQHPSTHGVLRLILE+EGETV E Sbjct: 13 TEGKVFTVTGG-DWDQVVS---GTDPINDERIVVNMGPQHPSTHGVLRLILELEGETVRE 68 Query: 60 ARCGIGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPER 119 AR +GYLHTGIEKNLEYR W QG TFVTRMDYLSP FNETAY L VEKLLGITD+I ER Sbjct: 69 ARSVVGYLHTGIEKNLEYRNWVQGSTFVTRMDYLSPLFNETAYSLAVEKLLGITDDITER 128 Query: 120 VNVIRVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAY 179 IRV+MMELNRISSHLV LAT GMELGA++ M GFR RE IL +FE+ITGLRMN AY Sbjct: 129 ATTIRVLMMELNRISSHLVWLATTGMELGAISIMLYGFREREYILDIFETITGLRMNHAY 188 Query: 180 IRPGGVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMAL 239 IRPGGVAQD+P D +I + + + + L+E DLL+ IW RT+ V LD+ GC+AL Sbjct: 189 IRPGGVAQDVPDDAIVKIREFLKMMPKKLKEYEDLLSGQPIWVERTKHVAVLDVTGCLAL 248 Query: 240 GITGPILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQ 299 GITGP+LRS GLP DLRK+ PYCGYE Y FDV T D +GRY +R+ E+ ES+KIVEQ Sbjct: 249 GITGPVLRSAGLPWDLRKTMPYCGYETYSFDVPTHPDGDVWGRYQVRLAEIRESLKIVEQ 308 Query: 300 CLDRLRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIR 359 LDRLRPGP M+ DRK+AWPA L +G DGMGNS EH+AKIMG SME+LIHHFKLVTEG R Sbjct: 309 ALDRLRPGPVMVADRKIAWPAQLAIGVDGMGNSLEHVAKIMGQSMESLIHHFKLVTEGFR 368 Query: 360 VPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITA 419 VP GQVYV +ESPRGELGVH VSDGGTRPYRVHYR+PSF NLQA+ AM+EGG++AD+I Sbjct: 369 VPPGQVYVGIESPRGELGVHAVSDGGTRPYRVHYREPSFVNLQALPAMAEGGLIADVIAG 428 Query: 420 VASIDPVMGGVDR 432 AS+DPVMGG DR Sbjct: 429 GASLDPVMGGCDR 441 >tr|C4E4P2|C4E4P2_STRRS Tax_Id=479432 SubName: Full=NADH dehydrogenase subunit D; EC=1.6.5.3;[Streptosporangium roseum DSM 43021] Length = 441 Score = 599 bits (1544), Expect = e-169 Identities = 289/430 (67%), Positives = 342/430 (79%), Gaps = 5/430 (1%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 V G DW E+VE G E++V+NMGPQHPSTHGVLRL+L ++GETVTEAR IGY Sbjct: 13 VYTVSGNDWTELVETLSGQQD-EQLVINMGPQHPSTHGVLRLVLNLDGETVTEARTVIGY 71 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEKN+EYR WTQG TFVTRMDYL+P FNETAYC+GVEKLLGITD IPER IRVM Sbjct: 72 LHTGIEKNIEYRTWTQGTTFVTRMDYLAPIFNETAYCMGVEKLLGITDRIPERAQAIRVM 131 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 MMEL RISSH+VA+ T GMELGA TP G R RE++L + E ITGLRMN AY+RPGGV+ Sbjct: 132 MMELTRISSHMVAIGTFGMELGATTPFLFGSREREMVLDVMEYITGLRMNMAYVRPGGVS 191 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 DLP ++ + + + +++M +L+ N ++ ART+DV YLDL GCMALG+TGP+L Sbjct: 192 VDLPAGAVDKVGELLKVMPGRIKDMRKMLDANPVYLARTKDVAYLDLTGCMALGVTGPML 251 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDR--- 303 R+ GLP DLRKS+PYCGYE YEFDV T D YGRY++RV EM ES+KI+EQ LDR Sbjct: 252 RAAGLPWDLRKSQPYCGYETYEFDVPTEKTADVYGRYLVRVAEMEESLKIIEQALDRLSG 311 Query: 304 -LRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPA 362 L+ G M++D+K+ WPA L +GPDG+GNSP+HIA IM SMEALIHHFKLVTEG RVPA Sbjct: 312 PLKGGRVMVDDKKIGWPAQLALGPDGLGNSPDHIAHIMSGSMEALIHHFKLVTEGFRVPA 371 Query: 363 GQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVAS 422 GQ + +VESPRGELG H+VSDGGTRPYRVH+RDPSFTNLQA+ A EGGMVAD+I+AVAS Sbjct: 372 GQAFASVESPRGELGAHVVSDGGTRPYRVHFRDPSFTNLQAMPATCEGGMVADVISAVAS 431 Query: 423 IDPVMGGVDR 432 IDPVMGGVDR Sbjct: 432 IDPVMGGVDR 441 >sp|Q0RRW5|NUOD_FRAAA Tax_Id=326424 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Frankia alni] Length = 470 Score = 596 bits (1536), Expect = e-168 Identities = 293/426 (68%), Positives = 337/426 (79%), Gaps = 2/426 (0%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 V G DW EI+ A G ERIVVNMGPQHPSTHGVLRL+LEI+GETVTE R IGY Sbjct: 47 VYTVTGGDWEEILGA--GEQDAERIVVNMGPQHPSTHGVLRLVLEIDGETVTETRLVIGY 104 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEK+ EYR WTQ VTF+TR DYLSP +NE AYCL VEKLLGITD+IPER VIRV+ Sbjct: 105 LHTGIEKSCEYRTWTQAVTFLTRADYLSPLYNEAAYCLSVEKLLGITDDIPERATVIRVL 164 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 +MEL RI+SHLV LATGGMELGA T M GFR RE +L L E ITGLRMN A+IRPGG+A Sbjct: 165 VMELQRIASHLVWLATGGMELGATTAMIFGFREREKVLDLLELITGLRMNHAFIRPGGLA 224 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 QDLP I + +AD+ + +RE LL IWKAR DV LD AGC+ALG+TGP+L Sbjct: 225 QDLPDGTERAIREFLADMPKRIREYHRLLTGQPIWKARMVDVNVLDAAGCIALGVTGPVL 284 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRLRP 306 R+ GLP DLRK+ PYCGYE YEFDV TA D++ RY++R++EM ES+KI+EQCLDRLRP Sbjct: 285 RAAGLPWDLRKTMPYCGYETYEFDVPTALEADSFARYLVRLEEMGESLKIIEQCLDRLRP 344 Query: 307 GPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQVY 366 GP M+ D+K+AWPA L +G DGMGNS HI IMG+SMEALIHHFKLVTEG RVP GQVY Sbjct: 345 GPVMVADKKIAWPAQLSIGADGMGNSLAHIRNIMGTSMEALIHHFKLVTEGFRVPPGQVY 404 Query: 367 VAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASIDPV 426 +ESPRGELG H+VSDGGTRP+RVH RDPSF NLQAV A++EGG VAD+I VAS+DPV Sbjct: 405 TQIESPRGELGYHVVSDGGTRPFRVHVRDPSFVNLQAVPALTEGGQVADVIVGVASVDPV 464 Query: 427 MGGVDR 432 +GGVDR Sbjct: 465 LGGVDR 470 >sp|A8LC98|NUOD_FRASN Tax_Id=298653 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Frankia sp.] Length = 457 Score = 594 bits (1532), Expect = e-168 Identities = 292/426 (68%), Positives = 338/426 (79%), Gaps = 2/426 (0%) Query: 7 VLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCGIGY 66 V G DW +++ G D GERI VNMGPQHPSTHGVLRL+LEIEGETVTE R IGY Sbjct: 34 VYTVTGGDWEQVLGV--GEDDGERITVNMGPQHPSTHGVLRLVLEIEGETVTETRLVIGY 91 Query: 67 LHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVIRVM 126 LHTGIEK+ EYR WTQ VTF+TR DYLSP +NE AYCL VEKLLGIT E+PER VIRV+ Sbjct: 92 LHTGIEKSCEYRTWTQAVTFLTRADYLSPLYNEAAYCLSVEKLLGITGEVPERATVIRVL 151 Query: 127 MMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPGGVA 186 +MEL RI+SHLV LATGGMELGA T M GFR RE IL L E+ITGLRMN AYIRPGG+A Sbjct: 152 VMELQRIASHLVWLATGGMELGATTGMIFGFREREKILDLLETITGLRMNHAYIRPGGLA 211 Query: 187 QDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITGPIL 246 QD+P + EI + + + +RE LL IWKAR DV +LD A C+ALG TGP+L Sbjct: 212 QDIPDEVIPEIRAFLDYMPKRIREYHALLTGQPIWKARMVDVNFLDAAACLALGTTGPVL 271 Query: 247 RSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDRLRP 306 R+ GLP DLRK+ PYCGYE YEFDV TA D+Y RY++R++EM ES+KI+EQCLDRLRP Sbjct: 272 RAAGLPWDLRKTMPYCGYETYEFDVPTALEGDSYARYLVRIEEMGESLKIIEQCLDRLRP 331 Query: 307 GPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAGQVY 366 GP M+ D+K+AWP+ L +G DGMGNS E+I KIMG+SMEALIHHFKLVTEG RVPAGQVY Sbjct: 332 GPVMVADKKIAWPSQLAIGSDGMGNSLEYIRKIMGTSMEALIHHFKLVTEGFRVPAGQVY 391 Query: 367 VAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASIDPV 426 +ESPRGELG H+VSDGGTRP+RVH RDPSF NLQAV A++EGG VAD+I VAS+DPV Sbjct: 392 TQIESPRGELGYHVVSDGGTRPFRVHVRDPSFVNLQAVPALTEGGQVADVIVGVASVDPV 451 Query: 427 MGGVDR 432 +GGVDR Sbjct: 452 LGGVDR 457 >sp|A0LRI4|NUOD_ACIC1 Tax_Id=351607 (nuoD)RecName: Full=NADH-quinone oxidoreductase subunit D; EC=1.6.99.5; AltName: Full=NADH dehydrogenase I subunit D; AltName: Full=NDH-1 subunit D;[Acidothermus cellulolyticus] Length = 440 Score = 594 bits (1531), Expect = e-168 Identities = 294/429 (68%), Positives = 337/429 (78%), Gaps = 1/429 (0%) Query: 4 TETVLVAGGQDWNEIVEAARGADPGERIVVNMGPQHPSTHGVLRLILEIEGETVTEARCG 63 T V G DW +IV P +RIVVNMGPQHPSTHGVLRL+LE+EGETVT+AR Sbjct: 13 TAPVYTVTGGDWQDIVSDIADRHP-DRIVVNMGPQHPSTHGVLRLVLELEGETVTQARVV 71 Query: 64 IGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVI 123 +GYLHTGIEKN EYR +TQ VTF+TR DYLSP F ETAYCL VEKLLGITD+IPER NVI Sbjct: 72 VGYLHTGIEKNCEYRTYTQAVTFLTRADYLSPLFTETAYCLAVEKLLGITDQIPERANVI 131 Query: 124 RVMMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIILSLFESITGLRMNSAYIRPG 183 RVMMMELNRI+SHLV LATGGME+GA++ M GFR RE+IL +FE ITGLRMN AYIRPG Sbjct: 132 RVMMMELNRIASHLVWLATGGMEIGALSAMLYGFREREMILDIFEMITGLRMNHAYIRPG 191 Query: 184 GVAQDLPPDGPTEIAKAIADLRQPLREMGDLLNENAIWKARTQDVGYLDLAGCMALGITG 243 GV QDLPP +I + + + + E DLL IW R + VGYLDL G +ALG TG Sbjct: 192 GVIQDLPPGAVEKIREFLDIMPARIDEYHDLLTGQPIWVRRLKGVGYLDLTGAVALGATG 251 Query: 244 PILRSTGLPHDLRKSEPYCGYENYEFDVITADGCDAYGRYMIRVKEMWESIKIVEQCLDR 303 PI+R+ G P DLRK PYCGYE Y+F+V T D + RY++R+ EM ES+KI+EQCLDR Sbjct: 252 PIMRAAGYPWDLRKVAPYCGYETYDFEVPTQTDGDCFARYLVRMDEMRESLKIIEQCLDR 311 Query: 304 LRPGPTMIEDRKLAWPADLKVGPDGMGNSPEHIAKIMGSSMEALIHHFKLVTEGIRVPAG 363 LRPGP M+ED+K+AWPA L +GPDGMGNS +HI IM +SMEALIHHFKLVTEG VP G Sbjct: 312 LRPGPVMVEDKKIAWPAKLALGPDGMGNSLDHIRHIMATSMEALIHHFKLVTEGFHVPPG 371 Query: 364 QVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQAVAAMSEGGMVADLITAVASI 423 QVYV VESPRGELGVH+VSDGGT+PYRVH R+PSF NLQ VAA+ EGGMVAD+I AVASI Sbjct: 372 QVYVPVESPRGELGVHLVSDGGTKPYRVHLREPSFVNLQTVAAVCEGGMVADVIAAVASI 431 Query: 424 DPVMGGVDR 432 DPVMGG DR Sbjct: 432 DPVMGGCDR 440 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.320 0.139 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,426,181,614 Number of extensions: 149304989 Number of successful extensions: 383919 Number of sequences better than 10.0: 2210 Number of HSP's gapped: 380408 Number of HSP's successfully gapped: 2656 Length of query: 432 Length of database: 3,846,993,858 Length adjustment: 140 Effective length of query: 292 Effective length of database: 2,268,465,438 Effective search space: 662391907896 Effective search space used: 662391907896 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 82 (36.2 bits)