BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_1486
         (149 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HGF1|B2HGF1_MYCMM Tax_Id=216594 SubName: Full=Two-component...   298   1e-79
tr|A0PR34|A0PR34_MYCUA Tax_Id=362242 SubName: Full=Two-component...   265   9e-70
tr|Q7TX59|Q7TX59_MYCBO Tax_Id=1765 SubName: Full=PROBABLE RESPON...   236   6e-61
tr|P95183|P95183_MYCTU Tax_Id=1773 SubName: Full=PROBABLE RESPON...   236   6e-61
tr|C6DX81|C6DX81_MYCTK Tax_Id=478434 SubName: Full=Response regu...   236   6e-61
tr|C1AGR0|C1AGR0_MYCBT Tax_Id=561275 SubName: Full=Putative resp...   236   6e-61
tr|A5U7F9|A5U7F9_MYCTA Tax_Id=419947 SubName: Full=Putative unch...   236   6e-61
tr|A1KND9|A1KND9_MYCBP Tax_Id=410289 SubName: Full=Probable resp...   236   6e-61
tr|A5WS50|A5WS50_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   236   6e-61
tr|A4KL42|A4KL42_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   236   6e-61
tr|A2VNV0|A2VNV0_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   236   6e-61
tr|Q73V16|Q73V16_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   226   6e-58
tr|A0QJU6|A0QJU6_MYCA1 Tax_Id=243243 SubName: Full=Two-component...   225   1e-57
tr|A4TDB7|A4TDB7_MYCGI Tax_Id=350054 SubName: Full=Response regu...   204   3e-51
tr|A1T6A7|A1T6A7_MYCVP Tax_Id=350058 SubName: Full=Response regu...   199   8e-50
tr|Q0S451|Q0S451_RHOSR Tax_Id=101510 SubName: Full=Putative unch...   199   1e-49
tr|C1AYM2|C1AYM2_RHOOB Tax_Id=632772 SubName: Full=Putative unch...   197   3e-49
tr|A0QU37|A0QU37_MYCS2 Tax_Id=246196 SubName: Full=Two-component...   197   3e-49
tr|Q1BBP2|Q1BBP2_MYCSS Tax_Id=164756 SubName: Full=Response regu...   192   8e-48
tr|A3PWS2|A3PWS2_MYCSJ Tax_Id=164757 SubName: Full=Response regu...   192   8e-48
tr|A1UDA4|A1UDA4_MYCSK Tax_Id=189918 SubName: Full=Response regu...   192   8e-48
tr|A1SLE9|A1SLE9_NOCSJ Tax_Id=196162 SubName: Full=Putative unch...   190   4e-47
tr|Q5YWC6|Q5YWC6_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...   186   1e-45
tr|C3JKE6|C3JKE6_RHOER Tax_Id=596309 SubName: Full=Two-component...   185   1e-45
tr|C0ZYK1|C0ZYK1_RHOE4 Tax_Id=234621 SubName: Full=Putative two-...   182   1e-44
tr|C1WX27|C1WX27_9ACTO Tax_Id=479435 SubName: Full=Putative unch...   174   3e-42
tr|B1MPG3|B1MPG3_MYCA9 Tax_Id=561007 SubName: Full=Probable resp...   154   2e-36
tr|D0LDB6|D0LDB6_GORB4 Tax_Id=526226 SubName: Full=Putative unch...   154   3e-36
tr|C7QBL8|C7QBL8_CATAD Tax_Id=479433 SubName: Full=Response regu...   151   2e-35
tr|B5I279|B5I279_9ACTO Tax_Id=463191 SubName: Full=Response regu...   149   1e-34
tr|B5HCR8|B5HCR8_STRPR Tax_Id=457429 SubName: Full=Two-component...   148   2e-34
tr|B5GUX5|B5GUX5_STRCL Tax_Id=443255 SubName: Full=Two-component...   147   5e-34
tr|B4V3J2|B4V3J2_9ACTO Tax_Id=465541 SubName: Full=Two-component...   147   5e-34
tr|Q82AK6|Q82AK6_STRAW Tax_Id=33903 SubName: Full=Putative two-c...   146   6e-34
tr|C9NGI5|C9NGI5_9ACTO Tax_Id=591167 SubName: Full=Response regu...   145   1e-33
tr|B5GI49|B5GI49_9ACTO Tax_Id=465543 SubName: Full=Two-component...   145   1e-33
tr|C1YW44|C1YW44_NOCDA Tax_Id=446468 SubName: Full=Putative unch...   145   2e-33
tr|C9YTU4|C9YTU4_STRSW Tax_Id=680198 SubName: Full=Putative resp...   144   3e-33
tr|Q47R56|Q47R56_THEFY Tax_Id=269800 SubName: Full=Putative resp...   143   5e-33
tr|C4EAQ7|C4EAQ7_STRRS Tax_Id=479432 SubName: Full=Putative unch...   143   5e-33
tr|Q9X810|Q9X810_STRCO Tax_Id=1902 SubName: Full=Putative respon...   142   2e-32
tr|C2AVG8|C2AVG8_TSUPA Tax_Id=521096 SubName: Full=Putative unch...   142   2e-32
tr|D1A8W8|D1A8W8_THECU Tax_Id=471852 SubName: Full=Response regu...   140   6e-32
tr|B1VZR0|B1VZR0_STRGG Tax_Id=455632 SubName: Full=Putative two-...   139   8e-32
tr|C1RG82|C1RG82_9CELL Tax_Id=446466 SubName: Full=Response regu...   137   4e-31
tr|A0LTH8|A0LTH8_ACIC1 Tax_Id=351607 SubName: Full=Response regu...   136   9e-31
tr|A4FAC6|A4FAC6_SACEN Tax_Id=405948 SubName: Full=Putative two-...   133   6e-30
tr|A3TK94|A3TK94_9MICO Tax_Id=313589 SubName: Full=Putative two-...   133   7e-30
tr|C7MZ01|C7MZ01_SACVD Tax_Id=471857 SubName: Full=Putative unch...   132   1e-29
tr|C6W9G0|C6W9G0_ACTMD Tax_Id=446462 SubName: Full=Response regu...   131   2e-29

>tr|B2HGF1|B2HGF1_MYCMM Tax_Id=216594 SubName: Full=Two-component
           system response regulator;[Mycobacterium marinum]
          Length = 149

 Score =  298 bits (764), Expect = 1e-79
 Identities = 148/149 (99%), Positives = 149/149 (100%)

Query: 1   VVPPGAGQPETSSICTVADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVA 60
           +VPPGAGQPETSSICTVADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVA
Sbjct: 1   MVPPGAGQPETSSICTVADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVA 60

Query: 61  TGPMVLRRMDEGGIDLAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASW 120
           TGPMVLRRMDEGGIDLAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASW
Sbjct: 61  TGPMVLRRMDEGGIDLAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASW 120

Query: 121 SRAEAAVPHPIDPIVLGRTVLGLLRAPAL 149
           SRAEAAVPHPIDPIVLGRTVLGLLRAPAL
Sbjct: 121 SRAEAAVPHPIDPIVLGRTVLGLLRAPAL 149


>tr|A0PR34|A0PR34_MYCUA Tax_Id=362242 SubName: Full=Two-component
           system response regulator;[Mycobacterium ulcerans]
          Length = 133

 Score =  265 bits (678), Expect = 9e-70
 Identities = 132/133 (99%), Positives = 133/133 (100%)

Query: 17  VADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDL 76
           +ADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDL
Sbjct: 1   MADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDL 60

Query: 77  AILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVL 136
           AILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVL
Sbjct: 61  AILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVL 120

Query: 137 GRTVLGLLRAPAL 149
           GRTVLGLLRAPAL
Sbjct: 121 GRTVLGLLRAPAL 133


>tr|Q7TX59|Q7TX59_MYCBO Tax_Id=1765 SubName: Full=PROBABLE RESPONSE
           REGULATOR;[Mycobacterium bovis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|P95183|P95183_MYCTU Tax_Id=1773 SubName: Full=PROBABLE RESPONSE
           REGULATOR; SubName: Full=Putative uncharacterized
           protein;[Mycobacterium tuberculosis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|C6DX81|C6DX81_MYCTK Tax_Id=478434 SubName: Full=Response
           regulator;[Mycobacterium tuberculosis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|C1AGR0|C1AGR0_MYCBT Tax_Id=561275 SubName: Full=Putative
           response regulator;[Mycobacterium bovis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|A5U7F9|A5U7F9_MYCTA Tax_Id=419947 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|A1KND9|A1KND9_MYCBP Tax_Id=410289 SubName: Full=Probable
           response regulator;[Mycobacterium bovis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|A5WS50|A5WS50_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           response regulator;[Mycobacterium tuberculosis]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|A4KL42|A4KL42_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           response regulator;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|A2VNV0|A2VNV0_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 133

 Score =  236 bits (602), Expect = 6e-61
 Identities = 115/130 (88%), Positives = 123/130 (94%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           DSS  LRILVYSDNVQTRE+V+RALGKRLHPDLP LTYVEVATGPMV+R+MD GGIDLAI
Sbjct: 3   DSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAI 62

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEATPTGGMGIAKQLKDEL +CPP++VLTGRPDD WLASWSRAEAAVPHP+DPIVLGR
Sbjct: 63  LDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGR 122

Query: 139 TVLGLLRAPA 148
           TVL LLRAPA
Sbjct: 123 TVLSLLRAPA 132


>tr|Q73V16|Q73V16_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 137

 Score =  226 bits (576), Expect = 6e-58
 Identities = 110/128 (85%), Positives = 118/128 (92%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           SS  LRILVYS N QTRE+V+RALG+ LHPDLP L+YVEVATGPMV++ MD+GGIDLAIL
Sbjct: 8   SSVALRILVYSSNAQTRERVMRALGRHLHPDLPELSYVEVATGPMVVKTMDQGGIDLAIL 67

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEATPTGGMGIAKQLKDELD CPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPI+LGRT
Sbjct: 68  DGEATPTGGMGIAKQLKDELDTCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPILLGRT 127

Query: 140 VLGLLRAP 147
           VL LLR P
Sbjct: 128 VLNLLRTP 135


>tr|A0QJU6|A0QJU6_MYCA1 Tax_Id=243243 SubName: Full=Two-component
           system response regulator;[Mycobacterium avium]
          Length = 137

 Score =  225 bits (574), Expect = 1e-57
 Identities = 110/128 (85%), Positives = 118/128 (92%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           SS  LRILVYS N QTRE+V+RALG+ LHPDLP L+YVEVATGPMV++ MD+GGIDLAIL
Sbjct: 8   SSVALRILVYSSNAQTRERVMRALGRHLHPDLPELSYVEVATGPMVVKTMDQGGIDLAIL 67

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEATPTGGMGIAKQLKDELD CPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPI+LGRT
Sbjct: 68  DGEATPTGGMGIAKQLKDELDACPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPILLGRT 127

Query: 140 VLGLLRAP 147
           VL LLR P
Sbjct: 128 VLNLLRTP 135


>tr|A4TDB7|A4TDB7_MYCGI Tax_Id=350054 SubName: Full=Response
           regulator receiver protein;[Mycobacterium gilvum]
          Length = 136

 Score =  204 bits (518), Expect = 3e-51
 Identities = 100/131 (76%), Positives = 112/131 (85%)

Query: 18  ADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLA 77
           A++   LR+LVYSDN +TREQV  ALG+R+HP+LP L YVEVATGPMV+R+MD GG DLA
Sbjct: 6   AETRGVLRVLVYSDNPRTREQVRLALGRRIHPELPELDYVEVATGPMVVRQMDAGGFDLA 65

Query: 78  ILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLG 137
           ILDGEATP GGMGIAKQLKDELD CPP++VLTGRPDDAWLA WSRAEAAVPHPIDPI LG
Sbjct: 66  ILDGEATPVGGMGIAKQLKDELDVCPPILVLTGRPDDAWLARWSRAEAAVPHPIDPIRLG 125

Query: 138 RTVLGLLRAPA 148
             V+ LLR  A
Sbjct: 126 DAVVSLLRPAA 136


>tr|A1T6A7|A1T6A7_MYCVP Tax_Id=350058 SubName: Full=Response
           regulator receiver protein;[Mycobacterium vanbaalenii]
          Length = 139

 Score =  199 bits (506), Expect = 8e-50
 Identities = 96/129 (74%), Positives = 111/129 (86%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           + + LRILVYSDN +TREQV  ALG+R+HP+LP L+Y+EVATGPMV+R+MDEGG DLAIL
Sbjct: 11  AQDPLRILVYSDNPRTREQVRLALGRRIHPELPELSYLEVATGPMVIRQMDEGGFDLAIL 70

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEA P GGMGIAKQLKDE+D+CPP++VLT R DDAWLA WSRAEAAVPHPIDPI LG  
Sbjct: 71  DGEAAPVGGMGIAKQLKDEIDDCPPVLVLTRRADDAWLARWSRAEAAVPHPIDPIRLGDA 130

Query: 140 VLGLLRAPA 148
           V+ LLR  A
Sbjct: 131 VVSLLRPSA 139


>tr|Q0S451|Q0S451_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 164

 Score =  199 bits (505), Expect = 1e-49
 Identities = 98/146 (67%), Positives = 117/146 (80%), Gaps = 6/146 (4%)

Query: 6   AGQPETSSICTVADSSED------LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEV 59
           +G   T SI +V D++ +      LR+LVYSD+  TR++VV ALG R HPDLP L YVEV
Sbjct: 14  SGGRGTGSIGSVTDATANTSRPDRLRVLVYSDDANTRQKVVLALGTRPHPDLPELEYVEV 73

Query: 60  ATGPMVLRRMDEGGIDLAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLAS 119
           AT P+V+R+MD GGIDLA+LDGEA P GGMGIAKQLKDE+D+CPP++VLTGRPDDAWLAS
Sbjct: 74  ATAPVVIRQMDAGGIDLAVLDGEAVPAGGMGIAKQLKDEIDDCPPILVLTGRPDDAWLAS 133

Query: 120 WSRAEAAVPHPIDPIVLGRTVLGLLR 145
           WSRAEAAVPHP+DPI L   V+ LLR
Sbjct: 134 WSRAEAAVPHPLDPIRLSEAVIALLR 159


>tr|C1AYM2|C1AYM2_RHOOB Tax_Id=632772 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus opacus]
          Length = 140

 Score =  197 bits (501), Expect = 3e-49
 Identities = 94/122 (77%), Positives = 105/122 (86%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           LR+LVYSD+  TR++VV ALGKR HPDLP L YVEVAT P+V+R MD GGIDLAILDGEA
Sbjct: 14  LRVLVYSDDANTRQKVVLALGKRPHPDLPELEYVEVATAPVVIREMDAGGIDLAILDGEA 73

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
            P GGMGIAKQLKDE+D CPP++VLTGRPDDAWLASWSRAEAAVPHP+DPI L   V+ L
Sbjct: 74  VPAGGMGIAKQLKDEIDACPPILVLTGRPDDAWLASWSRAEAAVPHPLDPIRLSEAVIAL 133

Query: 144 LR 145
           LR
Sbjct: 134 LR 135


>tr|A0QU37|A0QU37_MYCS2 Tax_Id=246196 SubName: Full=Two-component
           system response regulator;[Mycobacterium smegmatis]
          Length = 132

 Score =  197 bits (501), Expect = 3e-49
 Identities = 94/128 (73%), Positives = 108/128 (84%)

Query: 21  SEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILD 80
           S  LRILVYSDN +TREQV  ALGKR+HP+LP + YV+VAT PM + +MD GG DLAILD
Sbjct: 4   SAPLRILVYSDNPRTREQVRLALGKRIHPELPEIEYVDVATAPMAISQMDAGGFDLAILD 63

Query: 81  GEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTV 140
           GEATP GGMG+AKQ+KDE+D+CPP++VLTGR DDAWLA WSRAEAAVPHPIDPI L   V
Sbjct: 64  GEATPAGGMGVAKQVKDEIDDCPPILVLTGRADDAWLAKWSRAEAAVPHPIDPIRLSDAV 123

Query: 141 LGLLRAPA 148
           + LLRAPA
Sbjct: 124 VSLLRAPA 131


>tr|Q1BBP2|Q1BBP2_MYCSS Tax_Id=164756 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 134

 Score =  192 bits (489), Expect = 8e-48
 Identities = 92/125 (73%), Positives = 107/125 (85%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           LRILVYSDN QTRE V  ALGKR+HPDLP L Y++VAT PMV++++D GG DLAILDGEA
Sbjct: 8   LRILVYSDNPQTREAVRLALGKRIHPDLPELGYLDVATAPMVIKQLDAGGFDLAILDGEA 67

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
           TP GGMG+AKQ+KDE+ + PP++VLTGRPDDAWLA+WSRAEAAVPHPIDPI LG  V+ L
Sbjct: 68  TPAGGMGVAKQIKDEIADAPPILVLTGRPDDAWLATWSRAEAAVPHPIDPIRLGDAVVSL 127

Query: 144 LRAPA 148
           LR  A
Sbjct: 128 LRLSA 132


>tr|A3PWS2|A3PWS2_MYCSJ Tax_Id=164757 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 134

 Score =  192 bits (489), Expect = 8e-48
 Identities = 92/125 (73%), Positives = 107/125 (85%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           LRILVYSDN QTRE V  ALGKR+HPDLP L Y++VAT PMV++++D GG DLAILDGEA
Sbjct: 8   LRILVYSDNPQTREAVRLALGKRIHPDLPELGYLDVATAPMVIKQLDAGGFDLAILDGEA 67

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
           TP GGMG+AKQ+KDE+ + PP++VLTGRPDDAWLA+WSRAEAAVPHPIDPI LG  V+ L
Sbjct: 68  TPAGGMGVAKQIKDEIADAPPILVLTGRPDDAWLATWSRAEAAVPHPIDPIRLGDAVVSL 127

Query: 144 LRAPA 148
           LR  A
Sbjct: 128 LRLSA 132


>tr|A1UDA4|A1UDA4_MYCSK Tax_Id=189918 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 134

 Score =  192 bits (489), Expect = 8e-48
 Identities = 92/125 (73%), Positives = 107/125 (85%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           LRILVYSDN QTRE V  ALGKR+HPDLP L Y++VAT PMV++++D GG DLAILDGEA
Sbjct: 8   LRILVYSDNPQTREAVRLALGKRIHPDLPELGYLDVATAPMVIKQLDAGGFDLAILDGEA 67

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
           TP GGMG+AKQ+KDE+ + PP++VLTGRPDDAWLA+WSRAEAAVPHPIDPI LG  V+ L
Sbjct: 68  TPAGGMGVAKQIKDEIADAPPILVLTGRPDDAWLATWSRAEAAVPHPIDPIRLGDAVVSL 127

Query: 144 LRAPA 148
           LR  A
Sbjct: 128 LRLSA 132


>tr|A1SLE9|A1SLE9_NOCSJ Tax_Id=196162 SubName: Full=Putative
           uncharacterized protein;[Nocardioides sp.]
          Length = 139

 Score =  190 bits (483), Expect = 4e-47
 Identities = 90/123 (73%), Positives = 105/123 (85%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           LR+LVYSD+V TR+QV+ ALG+R HPDLP + YVEVAT P+V+  +D GGIDLAILDGEA
Sbjct: 11  LRVLVYSDDVNTRQQVIVALGRRPHPDLPEVEYVEVATEPVVISNLDAGGIDLAILDGEA 70

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
            P GGMGIAKQLKDE+  CPP+VVLTGRP DAWLA+WSRAEAAVPHP+DPI L  TV+ L
Sbjct: 71  VPAGGMGIAKQLKDEIYQCPPIVVLTGRPQDAWLATWSRAEAAVPHPLDPIQLAETVVSL 130

Query: 144 LRA 146
           LR+
Sbjct: 131 LRS 133


>tr|Q5YWC6|Q5YWC6_NOCFA Tax_Id=37329 SubName: Full=Putative
           uncharacterized protein;[Nocardia farcinica]
          Length = 136

 Score =  186 bits (471), Expect = 1e-45
 Identities = 91/125 (72%), Positives = 102/125 (81%)

Query: 21  SEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILD 80
           S  LR+LVYS++  TR QVV ALG R HPDL    Y+EVAT PMV+ RMD GGIDLAILD
Sbjct: 7   STALRVLVYSNDADTRRQVVLALGPRPHPDLAEFDYLEVATAPMVIERMDAGGIDLAILD 66

Query: 81  GEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTV 140
           GEATP GG+GIAKQLKDEL  CPP++VLTGRPDDAWLA WSRAEAAVPHPIDP+ L  +V
Sbjct: 67  GEATPAGGLGIAKQLKDELAQCPPVLVLTGRPDDAWLAKWSRAEAAVPHPIDPLRLTESV 126

Query: 141 LGLLR 145
           + LLR
Sbjct: 127 VELLR 131


>tr|C3JKE6|C3JKE6_RHOER Tax_Id=596309 SubName: Full=Two-component
           system response regulator;[Rhodococcus erythropolis
           SK121]
          Length = 140

 Score =  185 bits (470), Expect = 1e-45
 Identities = 87/127 (68%), Positives = 106/127 (83%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           +S   +RILVYSD+  TREQV  ALG+R HP +P + Y+EVAT P+V+ ++D GGIDLAI
Sbjct: 9   NSMAPVRILVYSDDAHTREQVRLALGERPHPSMPTIDYIEVATAPIVVAKLDAGGIDLAI 68

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEA+P GGMG+AKQLKDE+ +CPP++VLTGRPDDAWLASWSRAEA+VP PIDPI L  
Sbjct: 69  LDGEASPAGGMGVAKQLKDEIADCPPILVLTGRPDDAWLASWSRAEASVPQPIDPIELAS 128

Query: 139 TVLGLLR 145
           TV+ LLR
Sbjct: 129 TVIALLR 135


>tr|C0ZYK1|C0ZYK1_RHOE4 Tax_Id=234621 SubName: Full=Putative
           two-component response regulator;[Rhodococcus
           erythropolis]
          Length = 140

 Score =  182 bits (462), Expect = 1e-44
 Identities = 86/127 (67%), Positives = 105/127 (82%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAI 78
           +S   +RILVYSD+  TREQV  ALG+R HP +P + YVEVAT P+V+ ++D GGIDLAI
Sbjct: 9   NSMAPVRILVYSDDAHTREQVRLALGERPHPSMPTIDYVEVATAPIVVDKLDAGGIDLAI 68

Query: 79  LDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGR 138
           LDGEA+P GGMG+AKQLKDE+ +CPP++VLTGRPDDAWLASWSRAEA+ P PIDP+ L  
Sbjct: 69  LDGEASPAGGMGVAKQLKDEIVDCPPILVLTGRPDDAWLASWSRAEASAPQPIDPMELSS 128

Query: 139 TVLGLLR 145
           TV+ LLR
Sbjct: 129 TVIALLR 135


>tr|C1WX27|C1WX27_9ACTO Tax_Id=479435 SubName: Full=Putative
           uncharacterized protein;[Kribbella flavida DSM 17836]
          Length = 138

 Score =  174 bits (441), Expect = 3e-42
 Identities = 86/126 (68%), Positives = 97/126 (76%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           S   L++LVYSD+  TRE V  ALGKR   DLP L YVE AT P V++ MD GG+DLAIL
Sbjct: 3   SQRPLKVLVYSDDRTTRESVRLALGKRPAADLPELEYVECATEPAVIKTMDAGGVDLAIL 62

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEA P GGMGIA+QLKDE+  CPP++VLTGRP DAWLA+WSRAEAAVPHPIDPI L   
Sbjct: 63  DGEAVPAGGMGIARQLKDEIFRCPPVLVLTGRPQDAWLATWSRAEAAVPHPIDPIRLAEA 122

Query: 140 VLGLLR 145
             GLLR
Sbjct: 123 TAGLLR 128


>tr|B1MPG3|B1MPG3_MYCA9 Tax_Id=561007 SubName: Full=Probable
           response regulator;[Mycobacterium abscessus]
          Length = 135

 Score =  154 bits (390), Expect = 2e-36
 Identities = 78/129 (60%), Positives = 97/129 (75%), Gaps = 4/129 (3%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGG----IDLAIL 79
           L++LVYSD++  R +V++ +G R    LP L +VEVATGPMV+ R+   G    IDLAIL
Sbjct: 3   LQVLVYSDDITVRRKVIQGIGARPDSALPPLEFVEVATGPMVIERLAAPGSLPGIDLAIL 62

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEATP GGMG+AKQ+KDE+D  PP+V+LTGRP D WLASWSRAEA VP PIDP+ L  T
Sbjct: 63  DGEATPFGGMGVAKQVKDEVDAPPPIVILTGRPQDNWLASWSRAEAVVPRPIDPMRLTAT 122

Query: 140 VLGLLRAPA 148
           V+ LL + A
Sbjct: 123 VIDLLGSAA 131


>tr|D0LDB6|D0LDB6_GORB4 Tax_Id=526226 SubName: Full=Putative
           uncharacterized protein;[Gordonia bronchialis]
          Length = 135

 Score =  154 bits (389), Expect = 3e-36
 Identities = 73/130 (56%), Positives = 93/130 (71%)

Query: 16  TVADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGID 75
           T A  S  LR+LVYSD+  TR QV+ ALG R  P +P L+++EVAT PMV  ++D G +D
Sbjct: 2   TDATVSRALRVLVYSDDADTRAQVIGALGTRPDPAIPELSFIEVATAPMVFAQLDAGVVD 61

Query: 76  LAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIV 135
             I DGEATP+GGMG+AKQ+KDELD CPP +VL GR DD WLA WSRA+A    P+DPI 
Sbjct: 62  AVIADGEATPSGGMGVAKQMKDELDPCPPTLVLLGRADDRWLADWSRADATATLPVDPIA 121

Query: 136 LGRTVLGLLR 145
           L  T + +++
Sbjct: 122 LPATFVAMVK 131


>tr|C7QBL8|C7QBL8_CATAD Tax_Id=479433 SubName: Full=Response
           regulator receiver protein;[Catenulispora acidiphila]
          Length = 140

 Score =  151 bits (382), Expect = 2e-35
 Identities = 71/123 (57%), Positives = 92/123 (74%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           +++L+YSD+  TRE+VV ALG+R+  DLP +   E AT   V+  +D GG D+ ILDGEA
Sbjct: 10  VKVLIYSDDSTTREKVVLALGRRVAADLPPIKTHEFATPLAVVNAVDAGGFDILILDGEA 69

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
           TP GGMG+ +QLKDE+  CPP++VLTGRP D WLA+WSRAEA  PHPIDP+ L  +V  L
Sbjct: 70  TPAGGMGVCRQLKDEIYQCPPVLVLTGRPQDGWLATWSRAEAWTPHPIDPVALADSVAEL 129

Query: 144 LRA 146
           +RA
Sbjct: 130 VRA 132


>tr|B5I279|B5I279_9ACTO Tax_Id=463191 SubName: Full=Response
           regulator;[Streptomyces sviceus ATCC 29083]
          Length = 133

 Score =  149 bits (375), Expect = 1e-34
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+P + ++E AT   VL+ +D+GGID+ +LDGEA P
Sbjct: 7   VLVYSDDSNTREQVRIASGRRPAPDVPLVEFLECATPAAVLKELDKGGIDVCVLDGEAVP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+ NCPP+++L GRP DAWLA+WSRAE AV HP+DP+     +  LLR
Sbjct: 67  MGGMGLCRQIKDEVFNCPPVLLLIGRPQDAWLATWSRAEGAVTHPVDPVEFAAALASLLR 126


>tr|B5HCR8|B5HCR8_STRPR Tax_Id=457429 SubName: Full=Two-component
           system response regulator;[Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 133

 Score =  148 bits (374), Expect = 2e-34
 Identities = 67/121 (55%), Positives = 91/121 (75%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+P + ++E AT P VL+ +DEGGID+ +LDGE  P
Sbjct: 7   VLVYSDDSNTREQVRLAAGRRPAPDVPPVRFLECATLPAVLKALDEGGIDVCVLDGETVP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP+++L GRP DAWLA+WSRAEAAV  P+DP+    ++  LLR
Sbjct: 67  AGGMGVCRQIKDEIFECPPVLLLIGRPQDAWLATWSRAEAAVTLPVDPVEFAASLAALLR 126

Query: 146 A 146
           +
Sbjct: 127 S 127


>tr|B5GUX5|B5GUX5_STRCL Tax_Id=443255 SubName: Full=Two-component
           system response regulator;[Streptomyces clavuligerus
           ATCC 27064]
          Length = 133

 Score =  147 bits (370), Expect = 5e-34
 Identities = 66/120 (55%), Positives = 89/120 (74%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+PA+ ++E AT P VL  ++ GG+D+ +LDGE  P
Sbjct: 7   VLVYSDDATTREQVRLAAGRRPAPDVPAVEFIECATLPAVLAELERGGVDVCVLDGETAP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP+++L GRP DAWLA+WSRAEAAV  P+DP+ L   +  LLR
Sbjct: 67  AGGMGVCRQIKDEVFQCPPVLLLIGRPQDAWLATWSRAEAAVTLPVDPVELAGALASLLR 126


>tr|B4V3J2|B4V3J2_9ACTO Tax_Id=465541 SubName: Full=Two-component
           system response regulator;[Streptomyces sp. Mg1]
          Length = 134

 Score =  147 bits (370), Expect = 5e-34
 Identities = 68/122 (55%), Positives = 90/122 (73%)

Query: 25  RILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEAT 84
           R+LVYSD+  TREQV  A G+R   +LP + +VE AT P VL  +D GG+D+ +LDGEA 
Sbjct: 6   RVLVYSDDAGTREQVRLATGRRPAANLPPVEFVECATLPAVLSELDAGGVDVCVLDGEAA 65

Query: 85  PTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLL 144
           P GGMG+ +Q+KDE+  CPP+++L GRP DAWLA+WSRA+AAV  P+DP+     + GLL
Sbjct: 66  PAGGMGVCRQIKDEIFRCPPVLLLMGRPQDAWLATWSRADAAVTLPVDPVDFAGALAGLL 125

Query: 145 RA 146
           RA
Sbjct: 126 RA 127


>tr|Q82AK6|Q82AK6_STRAW Tax_Id=33903 SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           avermitilis]
          Length = 132

 Score =  146 bits (369), Expect = 6e-34
 Identities = 67/124 (54%), Positives = 91/124 (73%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+P + ++E AT   V+  +D+GGID+ +LDGEA P
Sbjct: 7   VLVYSDDSNTREQVRLATGRRPAPDVPVVEFLECATPAAVIAELDKGGIDVCVLDGEAVP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+ NCPP+++L GRP DAWLA+WSRA+AAV  P+DP+     +  LLR
Sbjct: 67  MGGMGLCRQIKDEVFNCPPVLLLIGRPQDAWLATWSRADAAVTLPVDPVEFAAALASLLR 126

Query: 146 APAL 149
             AL
Sbjct: 127 QKAL 130


>tr|C9NGI5|C9NGI5_9ACTO Tax_Id=591167 SubName: Full=Response
           regulator receiver protein;[Streptomyces flavogriseus
           ATCC 33331]
          Length = 133

 Score =  145 bits (366), Expect = 1e-33
 Identities = 65/120 (54%), Positives = 88/120 (73%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G R   D+PA+ ++E AT P VL  +D GG+D+ +LDGE  P
Sbjct: 7   VLVYSDDANTREQVRLAAGPRPAADVPAVEFLECATLPAVLSALDRGGVDVCVLDGETAP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+ +CPP+++L GRP DAWLA+WSRA+AAV HP+DP+     +  LLR
Sbjct: 67  AGGMGVCRQIKDEIFDCPPVLLLIGRPQDAWLATWSRADAAVTHPVDPVDFADALASLLR 126


>tr|B5GI49|B5GI49_9ACTO Tax_Id=465543 SubName: Full=Two-component
           system response regulator;[Streptomyces sp. SPB74]
          Length = 136

 Score =  145 bits (366), Expect = 1e-33
 Identities = 65/120 (54%), Positives = 87/120 (72%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +L+YSDN +TR QV  A G+R  PD P + +VE AT P VL  ++ GGID+ +LDGE  P
Sbjct: 7   VLIYSDNAETRTQVRLATGRRPAPDAPRVQFVECATLPAVLSELERGGIDVCVLDGETAP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP+++L GRP DAWLA+WSRA+AAV  P+DP+     + GLLR
Sbjct: 67  AGGMGVCRQIKDEIFRCPPVLLLMGRPQDAWLATWSRADAAVTLPVDPVEFAGALAGLLR 126


>tr|C1YW44|C1YW44_NOCDA Tax_Id=446468 SubName: Full=Putative
           uncharacterized protein;[Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 146

 Score =  145 bits (365), Expect = 2e-33
 Identities = 67/131 (51%), Positives = 94/131 (71%), Gaps = 4/131 (3%)

Query: 19  DSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDE----GGI 74
           D+   +R+LVYSD+  TREQV  A+G+R   D+P + +VE AT PMVLRR+++      +
Sbjct: 7   DTGARMRVLVYSDDADTREQVRLAVGRRPSADVPLVEFVECATAPMVLRRLEDTDPSARV 66

Query: 75  DLAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPI 134
           D+AI DGEA+P GGMG+ +Q+KDE+  CPP+++L GR DD WLA+WS+AE  V HPIDP+
Sbjct: 67  DVAIFDGEASPVGGMGLCRQVKDEIYRCPPVLLLVGRRDDGWLATWSQAEQVVSHPIDPV 126

Query: 135 VLGRTVLGLLR 145
            L   +  L+R
Sbjct: 127 ALAEALAELMR 137


>tr|C9YTU4|C9YTU4_STRSW Tax_Id=680198 SubName: Full=Putative
           response regulator;[Streptomyces scabies]
          Length = 133

 Score =  144 bits (363), Expect = 3e-33
 Identities = 65/120 (54%), Positives = 88/120 (73%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+PA+ ++E AT   V++ +D GGID+ +LDGEA P
Sbjct: 7   VLVYSDDSNTREQVRLATGRRPAPDVPAVEFIECATPAAVIKELDRGGIDVCVLDGEAVP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP +VL GRP DAWLA+WSRA+AAV  P++P+     +  LLR
Sbjct: 67  MGGMGVCRQIKDEIFECPPSLVLIGRPQDAWLATWSRADAAVTLPVEPVEFASALASLLR 126


>tr|Q47R56|Q47R56_THEFY Tax_Id=269800 SubName: Full=Putative
           response regulator;[Thermobifida fusca]
          Length = 143

 Score =  143 bits (361), Expect = 5e-33
 Identities = 67/130 (51%), Positives = 91/130 (70%)

Query: 16  TVADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGID 75
           T  D S  +R+LVYS +   REQV  A+G+R   DLP +  VE AT P VL+R++E  +D
Sbjct: 4   TGTDKSALMRVLVYSHDASVREQVRLAIGRRPAADLPKVEIVECATAPAVLKRLEETKVD 63

Query: 76  LAILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIV 135
           +AI DGEA P GGMG+ +Q+KDE+  CPP++++ GR DD WLA+WSRA+  V HPIDPI 
Sbjct: 64  VAIFDGEARPAGGMGLCRQVKDEIFECPPVLLIVGRRDDGWLAAWSRADKVVSHPIDPIA 123

Query: 136 LGRTVLGLLR 145
           L  ++  L+R
Sbjct: 124 LAESLAELMR 133


>tr|C4EAQ7|C4EAQ7_STRRS Tax_Id=479432 SubName: Full=Putative
           uncharacterized protein;[Streptosporangium roseum DSM
           43021]
          Length = 142

 Score =  143 bits (361), Expect = 5e-33
 Identities = 67/126 (53%), Positives = 90/126 (71%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           + + +R+LVYSD+  TRE+V +A+G+R   D+P +  VE AT   V++  D  GID+A+L
Sbjct: 7   TDDKMRVLVYSDDASTREKVRQAIGRRPAADVPLVEIVECATHAKVVQHFDSDGIDVAVL 66

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           D EA P GGMG+A+Q KDE+ +CPP+ +L  R DD WLA WSRAEA VP PIDP+VL  T
Sbjct: 67  DAEAQPAGGMGVARQAKDEVYDCPPICLLIARRDDRWLAEWSRAEAVVPQPIDPVVLADT 126

Query: 140 VLGLLR 145
           V  L+R
Sbjct: 127 VADLMR 132


>tr|Q9X810|Q9X810_STRCO Tax_Id=1902 SubName: Full=Putative response
           regulator;[Streptomyces coelicolor]
          Length = 133

 Score =  142 bits (357), Expect = 2e-32
 Identities = 66/124 (53%), Positives = 88/124 (70%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+  TREQV  A G+R  PD+P + +VE AT   VL+ +D GGID+ +LDGEA P
Sbjct: 7   VLVYSDDSNTREQVRLATGRRPAPDVPVVEFVECATPAAVLKELDRGGIDVCVLDGEAVP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP+++L  RP DAWLA+WSRAEAAV  P++P+     +  LLR
Sbjct: 67  MGGMGMCRQIKDEVFQCPPVLLLIARPQDAWLATWSRAEAAVTLPVEPVEFASALAALLR 126

Query: 146 APAL 149
              L
Sbjct: 127 EKRL 130


>tr|C2AVG8|C2AVG8_TSUPA Tax_Id=521096 SubName: Full=Putative
           uncharacterized protein;[Tsukamurella paurometabola DSM
           20162]
          Length = 140

 Score =  142 bits (357), Expect = 2e-32
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +L+YS N + R ++  ALG R  P LP +T  E AT P V+ R+D+GGIDLAILDGEA+P
Sbjct: 8   VLIYSSNARHRAEIAAALGTRPSPALPPITVTEAATAPTVVARLDQGGIDLAILDGEASP 67

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLL 144
            GG+G+A+QL+DE+D CPPL+V+T R  D WLA+WS A+A V HP+DP  +      LL
Sbjct: 68  AGGLGLARQLRDEIDPCPPLLVITARRADGWLATWSHADAWVSHPLDPFEVAAAAASLL 126


>tr|D1A8W8|D1A8W8_THECU Tax_Id=471852 SubName: Full=Response
           regulator receiver protein;[Thermomonospora curvata DSM
           43183]
          Length = 132

 Score =  140 bits (352), Expect = 6e-32
 Identities = 63/122 (51%), Positives = 88/122 (72%)

Query: 24  LRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEA 83
           +++LVYSD+  TREQV  A+G+R   DLP + +VE+AT P V+ R+D G ID+A++DGEA
Sbjct: 1   MKVLVYSDDAATREQVRLAIGRRPAADLPPVEFVEIATQPAVVARLDAGDIDVAVVDGEA 60

Query: 84  TPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL 143
            P GG+G+ +Q KDE+ +CPP V +  R DD WLA+WSRA+A V  P+DP+ L + V   
Sbjct: 61  QPAGGLGVCRQAKDEVYDCPPFVAIIARRDDGWLATWSRADAVVSQPLDPMALAQAVADQ 120

Query: 144 LR 145
           LR
Sbjct: 121 LR 122


>tr|B1VZR0|B1VZR0_STRGG Tax_Id=455632 SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           griseus subsp. griseus]
          Length = 133

 Score =  139 bits (351), Expect = 8e-32
 Identities = 63/120 (52%), Positives = 86/120 (71%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LVYSD+   REQV  A G+R   D+P + ++E AT P VL+ +D GG+D+ +LDGE  P
Sbjct: 7   VLVYSDDANIREQVRLAAGRRPAADVPPVEFLECATLPAVLKALDGGGVDVCVLDGETAP 66

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
            GGMG+ +Q+KDE+  CPP+++L GRP DAWLA+WSRAEAAV  P+DP+     +  LLR
Sbjct: 67  VGGMGVCRQIKDEIFRCPPVLLLIGRPQDAWLATWSRAEAAVTLPVDPVEFADALAALLR 126


>tr|C1RG82|C1RG82_9CELL Tax_Id=446466 SubName: Full=Response
           regulator with CheY-like receiver domain and
           winged-helix DNA-binding domain;[Cellulomonas flavigena
           DSM 20109]
          Length = 138

 Score =  137 bits (345), Expect = 4e-31
 Identities = 68/124 (54%), Positives = 86/124 (69%)

Query: 25  RILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEAT 84
           RIL+YSD+V  REQV  A+G+RL    P + + EVAT   V+   D GG D+ +LDGEA 
Sbjct: 12  RILLYSDDVDAREQVRLAVGRRLGRGEPDIEWTEVATADAVVAVADAGGADVLVLDGEAD 71

Query: 85  PTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLL 144
             GGMG+ +QLKDE+  CPP++VLTGRP DAWLASWS A+A V  P+DP+VL   V  L+
Sbjct: 72  KVGGMGLCRQLKDEVYACPPVLVLTGRPQDAWLASWSNADAVVSRPLDPVVLHTAVADLV 131

Query: 145 RAPA 148
            A A
Sbjct: 132 HAAA 135


>tr|A0LTH8|A0LTH8_ACIC1 Tax_Id=351607 SubName: Full=Response
           regulator receiver protein;[Acidothermus cellulolyticus]
          Length = 135

 Score =  136 bits (342), Expect = 9e-31
 Identities = 67/124 (54%), Positives = 84/124 (67%)

Query: 22  EDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDG 81
           E   ++VYSD+   RE+V  ALG+R  PDLP L Y+E AT   VL   D   +DL ILDG
Sbjct: 9   ETRTVVVYSDDATVRERVRLALGRRPAPDLPELRYIECATQYAVLEAADHENVDLFILDG 68

Query: 82  EATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVL 141
           EA P GGMG+ +QLKDE+  CPP++VL  R DD WLA+WSRA+A V HP+D + L   V+
Sbjct: 69  EAVPAGGMGLCRQLKDEIYRCPPVIVLIARRDDGWLATWSRADATVLHPVDGVRLTPVVV 128

Query: 142 GLLR 145
            LLR
Sbjct: 129 DLLR 132


>tr|A4FAC6|A4FAC6_SACEN Tax_Id=405948 SubName: Full=Putative
           two-component system response
           regulator;[Saccharopolyspora erythraea]
          Length = 136

 Score =  133 bits (335), Expect = 6e-30
 Identities = 61/123 (49%), Positives = 84/123 (68%)

Query: 26  ILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEATP 85
           +LV+S   + RE ++ A+G+R  PDLP + Y+E  T   VL   D G  DL ILDGEA P
Sbjct: 8   VLVFSHKPEVREAIITAIGRRPAPDLPRVHYIEAGTVADVLSEADAGTADLVILDGEAQP 67

Query: 86  TGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLLR 145
           TGGMG+++QLK+E++ CPP++V   R DD WLA+WS+A+A + HP+DPI    TV  +LR
Sbjct: 68  TGGMGVSRQLKNEIEPCPPIIVAVRRKDDRWLATWSQADAVIVHPLDPISAAETVAEVLR 127

Query: 146 APA 148
             A
Sbjct: 128 THA 130


>tr|A3TK94|A3TK94_9MICO Tax_Id=313589 SubName: Full=Putative
           two-component system response regulator;[Janibacter sp.
           HTCC2649]
          Length = 152

 Score =  133 bits (334), Expect = 7e-30
 Identities = 60/131 (45%), Positives = 88/131 (67%)

Query: 18  ADSSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLA 77
           +DS   + +L+YSD++ TR+ V  A G+R   D+    ++E AT   V   +D GG D+ 
Sbjct: 19  SDSVHQVSVLLYSDDITTRDAVRAAAGRRPARDVEVTRWLECATAFAVTEALDAGGWDIV 78

Query: 78  ILDGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLG 137
           +LDGEA   GG+G+ +++K+E+ NCPP++VLTGRP D WLA+WS A+ AVPHP+DPI + 
Sbjct: 79  VLDGEAAKNGGLGLCREIKNEIYNCPPVLVLTGRPQDGWLAAWSLADDAVPHPLDPIKVA 138

Query: 138 RTVLGLLRAPA 148
             + GL R  A
Sbjct: 139 EAIAGLARTRA 149


>tr|C7MZ01|C7MZ01_SACVD Tax_Id=471857 SubName: Full=Putative
           uncharacterized protein;[Saccharomonospora viridis]
          Length = 136

 Score =  132 bits (333), Expect = 1e-29
 Identities = 63/121 (52%), Positives = 84/121 (69%)

Query: 25  RILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAILDGEAT 84
           RILV+S   + R+ ++ A+G+R   DL  +TYVE      VL  MD G IDLAILDGEA 
Sbjct: 7   RILVFSHRAEVRDSIINAVGRRPAVDLGKVTYVEAEGVAEVLTEMDSGEIDLAILDGEAQ 66

Query: 85  PTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGLL 144
           PTGG+G+ +QLK+EL +CPP+VV   R DD WLA+WS+A+A + HP+DP+    TV  +L
Sbjct: 67  PTGGIGLTRQLKNELADCPPIVVAVRRKDDRWLATWSQADAVLVHPLDPLTAAETVADVL 126

Query: 145 R 145
           R
Sbjct: 127 R 127


>tr|C6W9G0|C6W9G0_ACTMD Tax_Id=446462 SubName: Full=Response
           regulator receiver protein;[Actinosynnema mirum]
          Length = 136

 Score =  131 bits (330), Expect = 2e-29
 Identities = 62/130 (47%), Positives = 87/130 (66%)

Query: 20  SSEDLRILVYSDNVQTREQVVRALGKRLHPDLPALTYVEVATGPMVLRRMDEGGIDLAIL 79
           +S+   ILV+S   + RE ++ A+G+R  PDL  + Y E  T   VL  +D    DL IL
Sbjct: 2   TSQTTTILVFSHRPEVRETIITAVGRRPAPDLGRVEYTEAGTIAEVLYELDNAKADLVIL 61

Query: 80  DGEATPTGGMGIAKQLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRT 139
           DGEA PTGGMG+++QLK+E+ NCPP+V+   R DD WLA+WS+A+A + HP+DP+    T
Sbjct: 62  DGEAQPTGGMGLSRQLKNEITNCPPVVIAVRRKDDRWLATWSQADAVLVHPLDPLAAAET 121

Query: 140 VLGLLRAPAL 149
           V  +LR+ AL
Sbjct: 122 VAEVLRSLAL 131


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.317    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,276,631,063
Number of extensions: 52532302
Number of successful extensions: 130197
Number of sequences better than 10.0: 510
Number of HSP's gapped: 132724
Number of HSP's successfully gapped: 510
Length of query: 149
Length of database: 3,846,993,858
Length adjustment: 112
Effective length of query: 37
Effective length of database: 2,584,171,122
Effective search space: 95614331514
Effective search space used: 95614331514
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)