BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1611 (192 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HHD0|B2HHD0_MYCMM Tax_Id=216594 SubName: Full=Transcription... 382 e-104 tr|A0PTD0|A0PTD0_MYCUA Tax_Id=362242 SubName: Full=Transcription... 382 e-104 tr|Q7TXC0|Q7TXC0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 252 2e-65 tr|P95092|P95092_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC... 252 2e-65 tr|C6DVJ2|C6DVJ2_MYCTK Tax_Id=478434 SubName: Full=Transcription... 252 2e-65 tr|C1AGI5|C1AGI5_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 252 2e-65 tr|A5U781|A5U781_MYCTA Tax_Id=419947 SubName: Full=Deor-family t... 252 2e-65 tr|A1KN64|A1KN64_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 252 2e-65 tr|A5WRX1|A5WRX1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 252 2e-65 tr|A4KKW8|A4KKW8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 252 2e-65 tr|C2AIG5|C2AIG5_TSUPA Tax_Id=521096 SubName: Full=Uncharacteriz... 121 4e-26 tr|Q9X9V5|Q9X9V5_STRCO Tax_Id=1902 SubName: Full=Putative unchar... 111 4e-23 tr|Q79SH7|Q79SH7_STRLI Tax_Id=1916 (ebrR)SubName: Full=EbrA repr... 111 4e-23 tr|A4FKN3|A4FKN3_SACEN Tax_Id=405948 SubName: Full=TetR-family t... 111 5e-23 tr|B5HR04|B5HR04_9ACTO Tax_Id=463191 SubName: Full=EbrA represso... 108 3e-22 tr|D0LAE6|D0LAE6_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 107 9e-22 tr|B4V7S9|B4V7S9_9ACTO Tax_Id=465541 SubName: Full=EbrA represso... 104 6e-21 tr|C9NHG2|C9NHG2_9ACTO Tax_Id=591167 SubName: Full=Transcription... 103 1e-20 tr|C9YYA3|C9YYA3_STRSW Tax_Id=680198 SubName: Full=Putative repr... 102 2e-20 tr|C7MYQ5|C7MYQ5_SACVD Tax_Id=471857 SubName: Full=Uncharacteriz... 100 1e-19 tr|B5GBS6|B5GBS6_9ACTO Tax_Id=465543 SubName: Full=EbrA represso... 98 5e-19 tr|C9Y002|C9Y002_CROTZ Tax_Id=693216 (ybjK)SubName: Full=Unchara... 97 7e-19 tr|D0WRG3|D0WRG3_9ACTO Tax_Id=649743 SubName: Full=Putative tran... 97 1e-18 tr|A8AIS1|A8AIS1_CITK8 Tax_Id=290338 SubName: Full=Putative unch... 96 3e-18 tr|A7MF26|A7MF26_ENTS8 Tax_Id=290339 SubName: Full=Putative unch... 96 3e-18 tr|Q829S3|Q829S3_STRAW Tax_Id=33903 SubName: Full=Putative TetR-... 95 4e-18 tr|B7LN10|B7LN10_ESCF3 Tax_Id=585054 (ybjK)SubName: Full=Putativ... 93 1e-17 tr|A5CTN1|A5CTN1_CLAM3 Tax_Id=443906 SubName: Full=Putative tran... 93 1e-17 tr|C4E2J1|C4E2J1_STRRS Tax_Id=479432 SubName: Full=Transcription... 93 2e-17 tr|B1ENV2|B1ENV2_9ESCH Tax_Id=502347 SubName: Full=Transcription... 92 4e-17 tr|C5C6H2|C5C6H2_BEUC1 Tax_Id=471853 SubName: Full=Transcription... 90 1e-16 tr|C2B2Q4|C2B2Q4_9ENTR Tax_Id=500640 SubName: Full=Putative unch... 89 2e-16 tr|B5NGL4|B5NGL4_SALET Tax_Id=454167 SubName: Full=Transcription... 89 2e-16 tr|Q8FJK0|Q8FJK0_ECOL6 Tax_Id=217992 (ybjK)SubName: Full=Putativ... 89 2e-16 tr|B7MQU9|B7MQU9_ECO81 Tax_Id=585397 (ybjK)SubName: Full=Putativ... 89 2e-16 tr|C2DKM8|C2DKM8_ECOLX Tax_Id=525281 (ybjK)SubName: Full=DEOR fa... 89 2e-16 tr|Q0TJK2|Q0TJK2_ECOL5 Tax_Id=362663 SubName: Full=Hypothetical ... 89 3e-16 tr|B3HUU8|B3HUU8_ECOLX Tax_Id=340197 SubName: Full=Transcription... 89 3e-16 tr|A9F7J5|A9F7J5_SORC5 Tax_Id=448385 SubName: Full=Transcription... 88 4e-16 tr|A4W8I8|A4W8I8_ENT38 Tax_Id=399742 SubName: Full=Transcription... 88 4e-16 tr|C1M9E9|C1M9E9_9ENTR Tax_Id=469595 SubName: Full=Transcription... 88 4e-16 sp|P75811|YBJK_ECOLI Tax_Id=83333 (ybjK)RecName: Full=Uncharacte... 88 5e-16 tr|Q8Z852|Q8Z852_SALTI Tax_Id=90370 SubName: Full=Putative tetR-... 88 5e-16 tr|C8U4C7|C8U4C7_ECO10 Tax_Id=585395 (ybjK)SubName: Full=Predict... 88 5e-16 tr|C6UE09|C6UE09_ECOBR Tax_Id=413997 (ybjK)SubName: Full=Predict... 88 5e-16 tr|C5W253|C5W253_ECOBB Tax_Id=511693 (ybjK)SubName: Full=YbjK pr... 88 5e-16 tr|C4ZY18|C4ZY18_ECOBW Tax_Id=595496 (ybjK)SubName: Full=Predict... 88 5e-16 tr|B1X7Y7|B1X7Y7_ECODH Tax_Id=316385 (ybjK)SubName: Full=Predict... 88 5e-16 tr|C9R005|C9R005_ECOD1 Tax_Id=536056 SubName: Full=Transcription... 88 5e-16 tr|B3I7A3|B3I7A3_ECOLX Tax_Id=340185 SubName: Full=Transcription... 88 5e-16 >tr|B2HHD0|B2HHD0_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 192 Score = 382 bits (980), Expect = e-104 Identities = 191/192 (99%), Positives = 192/192 (100%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +TREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE Sbjct: 1 MTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH Sbjct: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR Sbjct: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 Query: 181 LVGNDTGTPGSR 192 LVGNDTGTPGSR Sbjct: 181 LVGNDTGTPGSR 192 >tr|A0PTD0|A0PTD0_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 192 Score = 382 bits (980), Expect = e-104 Identities = 191/192 (99%), Positives = 192/192 (100%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +TREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE Sbjct: 1 MTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH Sbjct: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR Sbjct: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 Query: 181 LVGNDTGTPGSR 192 LVGNDTGTPGSR Sbjct: 181 LVGNDTGTPGSR 192 >tr|Q7TXC0|Q7TXC0_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY DEOR-FAMILY);[Mycobacterium bovis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|P95092|P95092_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY DEOR-FAMILY); SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|C6DVJ2|C6DVJ2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator, deoR-family;[Mycobacterium tuberculosis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|C1AGI5|C1AGI5_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|A5U781|A5U781_MYCTA Tax_Id=419947 SubName: Full=Deor-family transcriptional regulator;[Mycobacterium tuberculosis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|A1KN64|A1KN64_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein (Probably deoR-family);[Mycobacterium bovis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|A5WRX1|A5WRX1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein, deoR-family;[Mycobacterium tuberculosis] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|A4KKW8|A4KKW8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein (Probably deoR-family);[Mycobacterium tuberculosis str. Haarlem] Length = 202 Score = 252 bits (643), Expect = 2e-65 Identities = 126/184 (68%), Positives = 148/184 (80%) Query: 1 LTREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE 60 +T +RRPRDPAGRRQ I+EAA R+IAR GLG L+HRRVAAEA+VPVGSTTYYF+DL Sbjct: 1 MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDA 60 Query: 61 LREAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASH 120 LREAALAH A ++ D L W DLD+ D+ ATLARLT YL D DR+RTLNELY+AA+H Sbjct: 61 LREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAH 120 Query: 121 QPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 +PELQ LA+LW DGL+ALLEPRIG RAA V++F DGATLHA+I+ TPL LTDAIAR Sbjct: 121 RPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIAR 180 Query: 181 LVGN 184 LV + Sbjct: 181 LVAD 184 >tr|C2AIG5|C2AIG5_TSUPA Tax_Id=521096 SubName: Full=Uncharacterized conserved protein;[Tsukamurella paurometabola DSM 20162] Length = 192 Score = 121 bits (303), Expect = 4e-26 Identities = 72/174 (41%), Positives = 96/174 (55%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R RDP RR+ I++AA L+ G LTHR+VAA A VP+GSTT YF+ L +LREAAL Sbjct: 6 RRRDPERRRREIVDAAAALVLESGADALTHRKVAARAGVPLGSTTQYFATLDDLREAALR 65 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQSL 127 ++ A WL E + A YL+DP R + AA+ P+++ L Sbjct: 66 NLMDEAEQWLADLEAEFVRDGASSAAYTGALHRYLSDPQLVRGDFAMTCAAASSPDMEEL 125 Query: 128 AQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 A+ W+ LV L I AR V+ F DGAT+ A+I++ PLD L AIA L Sbjct: 126 ARHWTARLVEALARYIPVENARAVATFSDGATMDAVIAERPLDHALLASAIAAL 179 >tr|Q9X9V5|Q9X9V5_STRCO Tax_Id=1902 SubName: Full=Putative uncharacterized protein SCO1917;[Streptomyces coelicolor] Length = 197 Score = 111 bits (278), Expect = 4e-23 Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 2/176 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++ + G+ L+HR VAAEADVP+GSTTY+F+ L +L AAL Sbjct: 3 RRHDPE-RRQRIIDAAIRVVGQKGIAGLSHRTVAAEADVPLGSTTYHFATLDDLMVAALR 61 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQS 126 + D D+ LAR+ ++L L ELY+AA +P L+ Sbjct: 62 QANEGFARVVAAHPALSDPEADLSGELARVLGEWLGGDRTGVELEYELYLAALRRPALRP 121 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 +A W++G+ ALL R P AR + LDG L +++DTP D + + RL+ Sbjct: 122 VAAEWAEGVGALLAARTDPTTARALVAVLDGICLQVLLTDTPYDEEYAREVLTRLI 177 >tr|Q79SH7|Q79SH7_STRLI Tax_Id=1916 (ebrR)SubName: Full=EbrA repressor;[Streptomyces lividans] Length = 197 Score = 111 bits (278), Expect = 4e-23 Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 2/176 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++ + G+ L+HR VAAEADVP+GSTTY+F+ L +L AAL Sbjct: 3 RRHDPE-RRQRIIDAAIRVVGQKGIAGLSHRTVAAEADVPLGSTTYHFATLDDLMVAALR 61 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQS 126 + D D+ LAR+ ++L L ELY+AA +P L+ Sbjct: 62 QANEGFARVVAAHPALSDPEADLSGELARVLGEWLGGDRTGVELEYELYLAALRRPALRP 121 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 +A W++G+ ALL R P AR + LDG L +++DTP D + + RL+ Sbjct: 122 VAAEWAEGVGALLAARTDPTTARALVAVLDGICLQVLLTDTPYDEEYAREVLTRLI 177 >tr|A4FKN3|A4FKN3_SACEN Tax_Id=405948 SubName: Full=TetR-family transcriptional regulator;[Saccharopolyspora erythraea] Length = 295 Score = 111 bits (277), Expect = 5e-23 Identities = 69/178 (38%), Positives = 93/178 (52%), Gaps = 4/178 (2%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 RP+DPA RR+ I AA ++A G+ LTHR VAA A VP+GSTTYYF++L +L AL Sbjct: 115 RPKDPA-RRERIARAAISVVAERGIEKLTHRAVAAAAGVPLGSTTYYFANLDDLLAEALR 173 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTL--NELYVAASHQPELQ 125 A L W R LD S D A LA L YL P+R RT+ +ELYVAA H+P L Sbjct: 174 QAAGDDVAQLREWARGLDPSADFAAALADLVLHYL-GPERSRTVVEHELYVAALHRPALA 232 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 ++ W L P +V+S G L ++ ++ + R++G Sbjct: 233 HVSTEWDAALAEEFTAHTDPVTGKVLSALFCGLLLQGVVRESVPTRDEIETLFRRVLG 290 >tr|B5HR04|B5HR04_9ACTO Tax_Id=463191 SubName: Full=EbrA repressor;[Streptomyces sviceus ATCC 29083] Length = 183 Score = 108 bits (270), Expect = 3e-22 Identities = 71/177 (40%), Positives = 94/177 (53%), Gaps = 4/177 (2%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++ R GL L+HR AAEADVP+GSTTY+F L EL AAL Sbjct: 4 RRHDPE-RRQRIIDAAIRVVGRKGLAGLSHRSAAAEADVPLGSTTYHFKSLDELMVAALC 62 Query: 68 HVATS-ATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQ 125 + A H D D D+PA LAR+ D+L L ELY+AA +P L+ Sbjct: 63 QASEGFAKAVAAHGALD-DPGGDLPAGLARVLGDWLGGDRTGVELEYELYLAALRRPALR 121 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 +A W+D L L R P AR + +DG L +++ P D + R++ Sbjct: 122 PVAAEWADDLAERLAHRTDPVTARALVALMDGICLQVLLTGAPYDEGYAREVFGRVI 178 >tr|D0LAE6|D0LAE6_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 196 Score = 107 bits (266), Expect = 9e-22 Identities = 70/179 (39%), Positives = 90/179 (50%) Query: 6 ERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAA 65 +RR RDPA RRQ II+AA LI G LTHR VA A VP+GSTT YF+ L ELREA Sbjct: 9 QRRRRDPAQRRQVIIDAAAELIVELGSAGLTHRLVADRAGVPLGSTTQYFTSLDELREAG 68 Query: 66 LAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 L H+A + + L E + YL D R L AA P L Sbjct: 69 LHHLADEIDGEVRDFAGVLRERGASADVFGEMLHAYLCDIRLVRADLALLNAAFVDPALG 128 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVGN 184 LA ++ LL P IG + AR V+ ++DG +H ++ T L+DA+A L + Sbjct: 129 PLALRLPTAVIYLLIPHIGEQRARAVAAYVDGVAMHTVLRGTTPTIAELSDALAALTNS 187 >tr|B4V7S9|B4V7S9_9ACTO Tax_Id=465541 SubName: Full=EbrA repressor;[Streptomyces sp. Mg1] Length = 199 Score = 104 bits (259), Expect = 6e-21 Identities = 69/179 (38%), Positives = 95/179 (53%), Gaps = 5/179 (2%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++ G+ L+HR VAAEADVP+GSTTY+F L EL AAL Sbjct: 25 RRYDPE-RRQRIIDAAIRVVGAKGIAGLSHRSVAAEADVPLGSTTYHFKTLDELLVAALR 83 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYL-TDPDRHRTLNELYVAASHQPELQS 126 + T L + D+ +LARL L D R ELY+AA +P L+ Sbjct: 84 QANQAFTVTLPATPA---PAGDVAGSLARLLGRLLAADRGRVELEYELYLAALRRPALRP 140 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVGND 185 +A W + + L P P AR + +DG L +++DTP D + +AR++ D Sbjct: 141 VAAEWYEAVATALAPWTDPVTARALVAVMDGICLQVLLTDTPYDERYAREVLARVLRQD 199 >tr|C9NHG2|C9NHG2_9ACTO Tax_Id=591167 SubName: Full=Transcriptional regulator, TetR family;[Streptomyces flavogriseus ATCC 33331] Length = 205 Score = 103 bits (256), Expect = 1e-20 Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RR+ IIEAA R++ G+ L+HR VAAEADVP+GSTTY+F+ L EL AAL Sbjct: 3 RRHDPE-RRERIIEAAIRVVGAQGIAGLSHRSVAAEADVPLGSTTYHFASLDELLVAALR 61 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQS 126 + + + D + + L RL ++ + L ELY+AA +P L+ Sbjct: 62 RCNENFARMVREGDGLADPAVPLADALTRLLGEWFSGGRGPMELEYELYLAALRRPVLRP 121 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV-GND 185 +A W+D LV + R P AR ++ LDG L +++ D + +ARL G Sbjct: 122 VAGEWADALVEPIAHRTDPATARALTALLDGICLQVLLTGGEFDPVYTREMLARLAEGEP 181 Query: 186 TG 187 TG Sbjct: 182 TG 183 >tr|C9YYA3|C9YYA3_STRSW Tax_Id=680198 SubName: Full=Putative repressor;[Streptomyces scabies] Length = 178 Score = 102 bits (254), Expect = 2e-20 Identities = 65/176 (36%), Positives = 90/176 (51%), Gaps = 2/176 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++A G+ L+HR AAEADVP+GSTTY+F L +L AAL Sbjct: 3 RRYDPE-RRQRIIDAAIRVVAERGIAGLSHRSAAAEADVPLGSTTYHFKTLDDLMVAALR 61 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLT-DPDRHRTLNELYVAASHQPELQS 126 + E D TD+ A LA L ++ T D ELY+AA +P L+ Sbjct: 62 QANERFAKSVAAREALRDPGTDLAAELAALGGEWFTGDRTGLEVEYELYLAALRRPALRP 121 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 +A W L R P AR + +DG L +++ P D + +AR++ Sbjct: 122 VADEWGRAFADCLADRTDPVTARALVALVDGICLQVLLTGAPYDEEYAREVLARVI 177 >tr|C7MYQ5|C7MYQ5_SACVD Tax_Id=471857 SubName: Full=Uncharacterized conserved protein;[Saccharomonospora viridis] Length = 189 Score = 100 bits (248), Expect = 1e-19 Identities = 63/169 (37%), Positives = 84/169 (49%), Gaps = 4/169 (2%) Query: 2 TREVERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGEL 61 TR+ R P DP RR I AA +IA G+ LTHR VAAEA VP+GSTTY+F+ L +L Sbjct: 8 TRKRTRGPNDP-DRRNRIARAAITVIAERGINALTHRMVAAEAGVPLGSTTYHFATLDDL 66 Query: 62 REAALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNE--LYVAAS 119 AL A D L W L E D+ L L D +T R T+ E LY A Sbjct: 67 VAVALDEAARRNIDALREWNAALPEDVDLVTALTDLVLDSVT-KQRADTIAEYNLYALAL 125 Query: 120 HQPELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTP 168 +P L+ A W + L + R P R+++ G + ++ +TP Sbjct: 126 QRPHLRRAAVAWDNALADVFSTRTDPLTGRMIATLTCGLMMQTVLGETP 174 >tr|B5GBS6|B5GBS6_9ACTO Tax_Id=465543 SubName: Full=EbrA repressor;[Streptomyces sp. SPB74] Length = 190 Score = 97.8 bits (242), Expect = 5e-19 Identities = 68/183 (37%), Positives = 91/183 (49%), Gaps = 10/183 (5%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R+ R G+ L+HR AAEADVP+GSTTY+F+ L +L AAL Sbjct: 6 RRYDP-DRRQRIIDAAIRVTGRSGIAGLSHRTAAAEADVPLGSTTYHFATLDDLLVAAL- 63 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYL-----TDPDRHRTLNELYVAASHQP 122 A + RD P LA AD + D ELY+AA +P Sbjct: 64 ---RQANENFARLVRDRGALRAPPGGLAAALADAMGAWLAADRANAELEYELYLAALRRP 120 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+ +A WS L L R P AR V +DG L +++D+P D + + R++ Sbjct: 121 PLRPVAAEWSRALEEPLTARTDPATARAVVALMDGLCLQVLLTDSPYDEAYAREMLGRVL 180 Query: 183 GND 185 D Sbjct: 181 RED 183 >tr|C9Y002|C9Y002_CROTZ Tax_Id=693216 (ybjK)SubName: Full=Uncharacterized HTH-type transcriptional regulator ybjK;[Cronobacter turicensis z3032] Length = 181 Score = 97.4 bits (241), Expect = 7e-19 Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RR+ I+EA IA HG +THR++A EA VP+GS TYYF+ L L A Sbjct: 4 RQNDPQ-RRERILEATLACIAAHGFHHITHRKIALEAGVPLGSVTYYFTTLEALLAEAFT 62 Query: 68 HVATSAT---DWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPEL 124 A S + L + +E+ + A A + +T P+ + +LY AS QP+L Sbjct: 63 RFAESMSCQYQALMAQAQSREEACE--ALTALICGAQVTTPENMELMYQLYAYASRQPQL 120 Query: 125 QSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 + + Q W LE P AR + F++G TLH ++ PL+ + + R+VG Sbjct: 121 KIIMQDWMRRSQQTLETWFDPATARALDAFVEGMTLHYVVDREPLNRETIRSMVGRIVG 179 >tr|D0WRG3|D0WRG3_9ACTO Tax_Id=649743 SubName: Full=Putative transcriptional regulatory protein;[Actinomyces sp. oral taxon 848 str. F0332] Length = 248 Score = 96.7 bits (239), Expect = 1e-18 Identities = 57/163 (34%), Positives = 85/163 (52%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R RDP RR+ I+ AA +I G LTHR VAA A V +GSTT YFS + +LRE A+ Sbjct: 58 RKRDPEARRRAILNAAIDVIVEKGAAALTHRAVAARAGVSLGSTTKYFSSIEDLRENAMD 117 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQSL 127 + ++ +E +L+ D+ + L +YL D + R L A + L+ + Sbjct: 118 ALVREMDAGVDAFESELEACDDVESYCIGLAYEYLRDVRQVRADVALLNAGARDDGLREI 177 Query: 128 AQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLD 170 A D L+A L P G A + + L+GA +H+ + TP+D Sbjct: 178 ALRNPDRLIAALAPHFGAERAMALELCLEGAVVHSALRSTPID 220 >tr|A8AIS1|A8AIS1_CITK8 Tax_Id=290338 SubName: Full=Putative uncharacterized protein;[Citrobacter koseri] Length = 185 Score = 95.5 bits (236), Expect = 3e-18 Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 2/178 (1%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR I++A I HG+ +THR++AA A VP+GS TYYFS + EL AL Sbjct: 7 RRANDPL-RRDKIVQATQEAIITHGIHGVTHRKIAAIAQVPLGSMTYYFSGIDELLIEAL 65 Query: 67 AHVATSATDWLEHWERDLDESTD-IPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 + + + + + D+ D A + + +T PD + +LY AS +P L+ Sbjct: 66 SRFTETMSHQFQLFFADVTNVQDACHAITDMIYSSLVTTPDNMELMYQLYAFASRKPALK 125 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 ++ Q W LE P AR + F++G TLH + PL + + R+ G Sbjct: 126 TVMQNWMQRSQQTLEQWFEPVTARALDAFIEGMTLHFVTDRAPLTREDILVMVKRIAG 183 >tr|A7MF26|A7MF26_ENTS8 Tax_Id=290339 SubName: Full=Putative uncharacterized protein;[Enterobacter sakazakii] Length = 181 Score = 95.5 bits (236), Expect = 3e-18 Identities = 60/179 (33%), Positives = 85/179 (47%), Gaps = 2/179 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RR+ I+EA IA HG +THR++A EA VP+GS TYYF+ L L A Sbjct: 4 RQNDPQ-RRERILEATLACIATHGFHHITHRKIALEAGVPLGSVTYYFTSLEALLAEAFT 62 Query: 68 HVATS-ATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQS 126 A S + + + A A + +T P+ + +LY AS QP+L+ Sbjct: 63 RFAESMSRQYQALMAKAQSREEACEALTALICGAQVTTPENMELMYQLYAYASRQPQLKI 122 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVGND 185 + Q W LE P AR + F++G TLH ++ PL + + RL G D Sbjct: 123 IMQDWMRRSQQTLETWFDPATARALDAFVEGMTLHYVVDREPLKEAEIRVIVLRLAGVD 181 >tr|Q829S3|Q829S3_STRAW Tax_Id=33903 SubName: Full=Putative TetR-family transcriptional regulator;[Streptomyces avermitilis] Length = 178 Score = 94.7 bits (234), Expect = 4e-18 Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 2/176 (1%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP RRQ II+AA R++ G+ L+HR VAAEADVP+GSTTY+F L +L AAL Sbjct: 3 RRYDP-DRRQRIIDAAIRVVGDKGIAGLSHRSVAAEADVPLGSTTYHFKTLDDLMVAALR 61 Query: 68 HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQS 126 + D D+ +A L D+L L ELY+AA +P L+ Sbjct: 62 QANEGFAKVVAARGHLEDPRADLAGDIAALIGDWLAGDRTGVELEYELYLAALRRPALRP 121 Query: 127 LAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 +A DG + R P AR + +DG L +++ P D + +ARL+ Sbjct: 122 VAAECIDGFAEAVARRTDPVTARALVALVDGICLQVLLTGAPYDEAYARELLARLI 177 >tr|B7LN10|B7LN10_ESCF3 Tax_Id=585054 (ybjK)SubName: Full=Putative DNA-binding transcriptional regulator;[Escherichia fergusonii] Length = 179 Score = 93.2 bits (230), Expect = 1e-17 Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 2/178 (1%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II A IA HG+ +THR++A A VP+GS TYYFS + EL A Sbjct: 2 RRSNDPQ-RREKIIAATLEAIATHGIHAVTHRKIAIIAQVPLGSLTYYFSGIDELLTIAF 60 Query: 67 AHVATSATDWLEHWERDLDESTD-IPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 T+ + + + E + A + + +T P++ + +LY AS +P L+ Sbjct: 61 RRFTEIMTEQYQSFFTGVSEPIEACEAITEMIHSAQITTPEKMALMYQLYAFASRKPALK 120 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 + Q W L+ P AR + F++G TLH + PL + + R+ G Sbjct: 121 KVMQNWMHSSQQTLQQWFDPDTARALDAFIEGMTLHFVTDSKPLTRDDILKMVKRIAG 178 >tr|A5CTN1|A5CTN1_CLAM3 Tax_Id=443906 SubName: Full=Putative transcriptional regulator, TetR family;[Clavibacter michiganensis subsp. michiganensis] Length = 197 Score = 93.2 bits (230), Expect = 1e-17 Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 4/187 (2%) Query: 7 RRPR--DPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREA 64 R PR DP RR II+A +IA G+ THRRVAA ADVP+GS TY+F + +L Sbjct: 8 RAPRRSDPH-RRDRIIDACLDVIADVGVDGTTHRRVAAAADVPLGSMTYHFDGMDDLLHE 66 Query: 65 ALAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTL-NELYVAASHQPE 123 A A + + H + + A + + L R L +ELY A+ +PE Sbjct: 67 AFTRFADRVAEQMRHRMGGARTTEETEAAVVDVIVRDLLGTQRDLVLTHELYTLAARRPE 126 Query: 124 LQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 +++ Q W A E R+ P AR++ ++G ++H + P D + +A+ R++G Sbjct: 127 YRTITQTWMARSRATFEERVDPVTARMLDALVEGLSIHRALDPEPPDEAFVREAVRRILG 186 Query: 184 NDTGTPG 190 + G Sbjct: 187 SPAAPTG 193 >tr|C4E2J1|C4E2J1_STRRS Tax_Id=479432 SubName: Full=Transcriptional regulator, TetR family;[Streptosporangium roseum DSM 43021] Length = 240 Score = 92.8 bits (229), Expect = 2e-17 Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 4/180 (2%) Query: 7 RRPR--DPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREA 64 RRPR DP RR II+ +IA HGL HR VA ADVP+GS TY+F+ L EL E Sbjct: 59 RRPRRHDP-NRRDRIIDVTIDVIAEHGLAGTGHRSVAEAADVPLGSMTYHFASLDELVEL 117 Query: 65 ALAHVATSATDWLEHWERDLDESTDIPATLAR-LTADYLTDPDRHRTLNELYVAASHQPE 123 A + + D + ES D+ A + + D+L ELY+ A+ P Sbjct: 118 AFSRYVSVLADRFDARLAAAPESGDLAAIVTDVIMVDFLRARRDLVLAYELYLGAARNPA 177 Query: 124 LQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 L+ + + W LE P ARV+ L+G LH ++ P+ + A+AR++G Sbjct: 178 LREVTRTWMRRSRRALERLTDPATARVLDALLEGLVLHNFLATDPMTREEVHQAVARVIG 237 >tr|B1ENV2|B1ENV2_9ESCH Tax_Id=502347 SubName: Full=Transcriptional regulator, TetR family;[Escherichia albertii TW07627] Length = 191 Score = 91.7 bits (226), Expect = 4e-17 Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 2/181 (1%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELR-EAA 65 RR DP RR+ II A + +G+ +THR++A A VP+GS TYYFS + EL EA Sbjct: 2 RRANDPQ-RREKIIRATLEAVKLYGIHAVTHRKIAVLAQVPLGSMTYYFSGIDELLLEAF 60 Query: 66 LAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 T + + ++ D S+ A + + + P+ + +LY AS +P+L+ Sbjct: 61 SRFTQTMSLQYQTFFDDVSDASSACQAITEMIYSSQVATPNNMELMYQLYALASRKPQLK 120 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVGND 185 ++ Q W LE P AR + F++G TLH + PL + + R+ G + Sbjct: 121 TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDCKPLSREEILKMVERVAGLE 180 Query: 186 T 186 T Sbjct: 181 T 181 >tr|C5C6H2|C5C6H2_BEUC1 Tax_Id=471853 SubName: Full=Transcriptional regulator, TetR family;[Beutenbergia cavernae] Length = 204 Score = 90.1 bits (222), Expect = 1e-16 Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 15/196 (7%) Query: 8 RPR--DPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAA 65 RPR DP RR I++A ++A G+ +HR+VAA ADVP+GS TY+F+ + EL AA Sbjct: 13 RPRRHDPR-RRDRIVDACLDVVAADGVAGTSHRKVAAAADVPLGSMTYHFAGMTELLHAA 71 Query: 66 LAHVATSATDWLEHWERDLDESTD----IPATLARLTADYLTDPDRHRTLNELYVAASHQ 121 A D E +ER L +T A +A +T D +ELY A+ + Sbjct: 72 FTRF---ADDVAERFERRLAPATTTAEVATAVVALITQDTFATRRDLVLTHELYTLAARE 128 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 PE +++ W LE + P AR++ ++G T+H + D A+ I R+ Sbjct: 129 PEFRAITAAWMARSRRALEQHVDPTTARLLDALVEGLTIHRALDTGERDEAAVVVGIQRI 188 Query: 182 VGNDT-----GTPGSR 192 + T TP SR Sbjct: 189 MAEPTTATPHATPESR 204 >tr|C2B2Q4|C2B2Q4_9ENTR Tax_Id=500640 SubName: Full=Putative uncharacterized protein;[Citrobacter youngae ATCC 29220] Length = 182 Score = 89.4 bits (220), Expect = 2e-16 Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 2/178 (1%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ I++A + +G+ +THR++A A VP+GS TYYFS + EL A Sbjct: 2 RRANDPL-RREKIVQATLEAVITYGVHGVTHRKIATIAGVPLGSMTYYFSGIDELLMEAF 60 Query: 67 AHVATSATDWLEHWERDL-DESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 + + + D+ D A + + +T PD + +LY AS +P L+ Sbjct: 61 GRFTAMMSQQYQAFFADVADAQAACHAITEMIYSSQVTTPDNMELMYQLYAFASRKPTLK 120 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 ++ Q W LE P AR + FL+G TLH + PL + + R+ G Sbjct: 121 TVMQNWMLRSQQTLEQWFEPVTARALDAFLEGMTLHFVTDKKPLSREDILVMVERIAG 178 >tr|B5NGL4|B5NGL4_SALET Tax_Id=454167 SubName: Full=Transcriptional regulator, TetR family;[Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 206 Score = 89.4 bits (220), Expect = 2e-16 Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYF+ + +A L Sbjct: 7 RRANDPK-RREKIIQATLEAVKTYGVHAVTHRKIAAIAQVPLGSMTYYFAGM----DALL 61 Query: 67 AHVATSATDWLEHWERDL-DESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 + T T+ + H +D + TD +T +T PD + +LY AS + Sbjct: 62 SEAFTLFTENMSHQYQDFFAQVTDAEGACQAITKMIYGSQVTTPDNMALMYQLYAYASDK 121 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+ + Q W L + AR + F++G TLH + TPL A+ + R+ Sbjct: 122 PALKIVMQNWMQRSQNTLAQWFDAQTARALDAFIEGMTLHFVTDRTPLAREAILQMVKRI 181 Query: 182 VG 183 G Sbjct: 182 AG 183 >tr|Q8FJK0|Q8FJK0_ECOL6 Tax_Id=217992 (ybjK)SubName: Full=Putative uncharacterized protein ybjK;[Escherichia coli O6] Length = 188 Score = 89.0 bits (219), Expect = 2e-16 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYFS + EL A Sbjct: 12 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF 70 Query: 67 AHVATSATDWLEHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQP 122 + + ++ + +D P +T + + PD + +LY AS +P Sbjct: 71 SRFTEIMS---RQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKP 127 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 128 LLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIA 187 Query: 183 G 183 G Sbjct: 188 G 188 >tr|B7MQU9|B7MQU9_ECO81 Tax_Id=585397 (ybjK)SubName: Full=Putative DNA-binding transcriptional regulator;[Escherichia coli O81] Length = 178 Score = 89.0 bits (219), Expect = 2e-16 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYFS + EL A Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF 60 Query: 67 AHVATSATDWLEHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQP 122 + + ++ + +D P +T + + PD + +LY AS +P Sbjct: 61 SRFTEIMS---RQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKP 117 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 118 LLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIA 177 Query: 183 G 183 G Sbjct: 178 G 178 >tr|C2DKM8|C2DKM8_ECOLX Tax_Id=525281 (ybjK)SubName: Full=DEOR family transcriptional regulator;[Escherichia coli 83972] Length = 178 Score = 89.0 bits (219), Expect = 2e-16 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYFS + EL A Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF 60 Query: 67 AHVATSATDWLEHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQP 122 + + ++ + +D P +T + + PD + +LY AS +P Sbjct: 61 SRFTEIMS---RQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKP 117 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 118 LLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIA 177 Query: 183 G 183 G Sbjct: 178 G 178 >tr|Q0TJK2|Q0TJK2_ECOL5 Tax_Id=362663 SubName: Full=Hypothetical transcriptional regulator YbjK;[Escherichia coli O6:K15:H31] Length = 178 Score = 88.6 bits (218), Expect = 3e-16 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYFS + EL A Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF 60 Query: 67 AHVATSATDWLEHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQP 122 + + ++ + +D P +T + + PD + +LY AS +P Sbjct: 61 SRFTEIMS---RQYQAFFSDVSDAPGARQAITDMIYSSQVATPDNMELMYQLYALASRKP 117 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 118 LLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIA 177 Query: 183 G 183 G Sbjct: 178 G 178 >tr|B3HUU8|B3HUU8_ECOLX Tax_Id=340197 SubName: Full=Transcriptional regulator, TetR family;[Escherichia coli F11] Length = 178 Score = 88.6 bits (218), Expect = 3e-16 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 8/181 (4%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYFS + EL A Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF 60 Query: 67 AHVATSATDWLEHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQP 122 + + ++ + +D P +T + + PD + +LY AS +P Sbjct: 61 SRFTEIMS---RQYQAFFSDVSDAPGARQAITDMIYSSQVATPDNMELMYQLYALASRKP 117 Query: 123 ELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLV 182 L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 118 LLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIA 177 Query: 183 G 183 G Sbjct: 178 G 178 >tr|A9F7J5|A9F7J5_SORC5 Tax_Id=448385 SubName: Full=Transcriptional regulator, TetR family;[Sorangium cellulosum] Length = 191 Score = 88.2 bits (217), Expect = 4e-16 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 4/175 (2%) Query: 8 RPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAALA 67 R DP GRR+ ++ A +IA G+ +HR +A ADVP+GSTTY+F+ + EL AA Sbjct: 16 RRHDP-GRRERLLSTALDVIAEQGVAGASHRSIARAADVPLGSTTYHFASIDELLAAAFT 74 Query: 68 -HVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLN-ELYVAASHQPELQ 125 H A + E D + + LT L +R L+ ELYVAA+ +P L+ Sbjct: 75 RHADDMAARFEEQMRAACDRGAAVELLVEHLTT-ALLGSERDLVLSVELYVAAARRPALR 133 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIAR 180 ++ Q W LE P AR + ++G LH+ +S P+ + AI R Sbjct: 134 AVTQAWMLRSRRALELHFDPVTARGLDALIEGLVLHSALSTDPMAPEQIRHAIRR 188 >tr|A4W8I8|A4W8I8_ENT38 Tax_Id=399742 SubName: Full=Transcriptional regulator, TetR family;[Enterobacter sp.] Length = 182 Score = 88.2 bits (217), Expect = 4e-16 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 2/182 (1%) Query: 5 VERRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREA 64 + RRP DP RR+ I++A IA HG+ +THR++A A VP+GS TYYF + L E Sbjct: 1 MSRRPNDPL-RRERILQATLETIAEHGIDAVTHRKIATCAGVPLGSMTYYFEGMDSLLEE 59 Query: 65 ALAH-VATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPE 123 A + + + + + + + +T P + +LY S +P Sbjct: 60 AFTRFTCDMSQQYCDFFAGVTGPEMACESITTLIHSSEVTTPHNMELMYQLYALMSRKPA 119 Query: 124 LQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 L+ + Q W + LE P AR + F++G TLH + PL + + R+ G Sbjct: 120 LKKVMQDWMQTSQSTLEQWFDPVTARALDAFIEGMTLHFVTDRQPLSRDDIRRMVGRIAG 179 Query: 184 ND 185 + Sbjct: 180 EN 181 >tr|C1M9E9|C1M9E9_9ENTR Tax_Id=469595 SubName: Full=Transcriptional regulator;[Citrobacter sp. 30_2] Length = 186 Score = 88.2 bits (217), Expect = 4e-16 Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 2/178 (1%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGE-LREAA 65 RR DP RR+ I++A + HG+ +THR++A A+VP+GS TYYFS + E L EA Sbjct: 2 RRANDPQ-RREKIVQATLDAVIAHGIHGVTHRKIAMIAEVPLGSMTYYFSGIDELLMEAF 60 Query: 66 LAHVATSATDWLEHWERDLDESTDIPATLARLTADYLTDPDRHRTLNELYVAASHQPELQ 125 + + + D S A + +T PD + +LY AS +P L+ Sbjct: 61 GCFTDRMMLQYQDFFADVKDASQACHAITDMIYGSQVTTPDNMELMYQLYAFASRKPALK 120 Query: 126 SLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARLVG 183 ++ Q W LE P AR + F++G TLH + PL + + R+ G Sbjct: 121 TVMQNWMLRSQQTLEQWFDPVTARALDAFIEGMTLHFVTDKKPLQREDILLMVERIAG 178 >sp|P75811|YBJK_ECOLI Tax_Id=83333 (ybjK)RecName: Full=Uncharacterized HTH-type transcriptional regulator ybjK;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|Q8Z852|Q8Z852_SALTI Tax_Id=90370 SubName: Full=Putative tetR-family transcriptional regulator; SubName: Full=Putative TetR-family transcriptional regulator;[Salmonella typhi] Length = 206 Score = 87.8 bits (216), Expect = 5e-16 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++AA A VP+GS TYYF+ + +A L Sbjct: 7 RRANDPK-RREKIIQATLEAVKTYGVHAVTHRKIAAIAQVPLGSMTYYFAGM----DALL 61 Query: 67 AHVATSATDWLEHWERDL-DESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 + T T+ + +D + TD+ +T +T PD + +LY AS + Sbjct: 62 SEAFTLFTENMSRQYQDFFAQVTDVEGACQAITEMIYGSQVTTPDNMALMYQLYAYASDK 121 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+ + Q W L + AR + F++G TLH + TPL A+ + R+ Sbjct: 122 PALKIVMQNWMQRSQNTLAQWFDAQTARALDAFIEGMTLHFVTDRTPLAREAILQMVKRI 181 Query: 182 VG 183 G Sbjct: 182 AG 183 >tr|C8U4C7|C8U4C7_ECO10 Tax_Id=585395 (ybjK)SubName: Full=Predicted DNA-binding transcriptional regulator, DEOR-type;[Escherichia coli O103:H2] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|C6UE09|C6UE09_ECOBR Tax_Id=413997 (ybjK)SubName: Full=Predicted DNA-binding transcriptional regulator;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|C5W253|C5W253_ECOBB Tax_Id=511693 (ybjK)SubName: Full=YbjK protein;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|C4ZY18|C4ZY18_ECOBW Tax_Id=595496 (ybjK)SubName: Full=Predicted DNA-binding transcriptional regulator;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|B1X7Y7|B1X7Y7_ECODH Tax_Id=316385 (ybjK)SubName: Full=Predicted DNA-binding transcriptional regulator;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|C9R005|C9R005_ECOD1 Tax_Id=536056 SubName: Full=Transcriptional regulator, TetR family;[Escherichia coli] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 >tr|B3I7A3|B3I7A3_ECOLX Tax_Id=340185 SubName: Full=Transcriptional regulator, TetR family;[Escherichia coli E22] Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 10/182 (5%) Query: 7 RRPRDPAGRRQTIIEAAGRLIARHGLGDLTHRRVAAEADVPVGSTTYYFSDLGELREAAL 66 RR DP RR+ II+A + +G+ +THR++A A VP+GS TYYFS + EL L Sbjct: 2 RRANDPQ-RREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDEL----L 56 Query: 67 AHVATSATDWL-EHWERDLDESTDIPATLARLT----ADYLTDPDRHRTLNELYVAASHQ 121 +S T+ + ++ + +D P +T + + PD + +LY AS + Sbjct: 57 LEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRK 116 Query: 122 PELQSLAQLWSDGLVALLEPRIGPRAARVVSIFLDGATLHAMISDTPLDAPALTDAIARL 181 P L+++ Q W LE P AR + F++G TLH + PL + + R+ Sbjct: 117 PLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERV 176 Query: 182 VG 183 G Sbjct: 177 AG 178 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,473,099,039 Number of extensions: 57783455 Number of successful extensions: 181503 Number of sequences better than 10.0: 2236 Number of HSP's gapped: 183563 Number of HSP's successfully gapped: 2240 Length of query: 192 Length of database: 3,846,993,858 Length adjustment: 130 Effective length of query: 62 Effective length of database: 2,381,217,468 Effective search space: 147635483016 Effective search space used: 147635483016 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 76 (33.9 bits)