BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1658 (488 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HHH6|B2HHH6_MYCMM Tax_Id=216594 (hycQ)SubName: Full=Hydroge... 576 e-162 tr|A0PPT7|A0PPT7_MYCUA Tax_Id=362242 (hycQ)SubName: Full=Hydroge... 573 e-161 tr|A0QMU0|A0QMU0_MYCA1 Tax_Id=243243 SubName: Full=Hydrogenase-4... 421 e-116 tr|Q10883|Q10883_MYCTU Tax_Id=1773 (hycQ)SubName: Full=NADH-ubiq... 404 e-110 tr|C6DQV0|C6DQV0_MYCTK Tax_Id=478434 SubName: Full=Hydrogenase h... 404 e-110 tr|A5TYF9|A5TYF9_MYCTA Tax_Id=419947 (hycQ)SubName: Full=Putativ... 404 e-110 tr|A5WIE1|A5WIE1_MYCTF Tax_Id=336982 SubName: Full=Hydrogenase h... 404 e-110 tr|A4KNB4|A4KNB4_MYCTU Tax_Id=395095 SubName: Full=Hydrogenase h... 404 e-110 tr|A2VN21|A2VN21_MYCTU Tax_Id=348776 SubName: Full=Hydrogenase h... 404 e-110 tr|Q7U2V7|Q7U2V7_MYCBO Tax_Id=1765 (hycQ)SubName: Full=POSSIBLE ... 402 e-110 tr|C1AJB2|C1AJB2_MYCBT Tax_Id=561275 (hycQ)SubName: Full=Putativ... 402 e-110 tr|A1KEQ7|A1KEQ7_MYCBP Tax_Id=410289 (hycQ)SubName: Full=Possibl... 402 e-110 tr|D1A6C9|D1A6C9_THECU Tax_Id=471852 SubName: Full=NADH/Ubiquino... 253 5e-65 tr|C8XAS2|C8XAS2_NAKMY Tax_Id=479431 SubName: Full=NADH/Ubiquino... 230 4e-58 tr|A1SQ78|A1SQ78_NOCSJ Tax_Id=196162 SubName: Full=NADH dehydrog... 218 2e-54 tr|C9R5L9|C9R5L9_AGGAD Tax_Id=668336 SubName: Full=Hydrogenase-4... 181 1e-43 tr|C0ATP1|C0ATP1_9ENTR Tax_Id=471881 SubName: Full=Putative unch... 173 5e-41 tr|B4EXC2|B4EXC2_PROMH Tax_Id=529507 (hyfF)SubName: Full=Hydroge... 172 7e-41 tr|C2LLC9|C2LLC9_PROMI Tax_Id=525369 (hyfF)SubName: Full=Hydroge... 172 7e-41 tr|C6ANV9|C6ANV9_AGGAN Tax_Id=634176 SubName: Full=Hydrogenase-4... 169 7e-40 tr|Q2C1Q8|Q2C1Q8_9GAMM Tax_Id=121723 SubName: Full=NADH dehydrog... 169 7e-40 tr|C4T2Q9|C4T2Q9_YERIN Tax_Id=349965 SubName: Full=Hydrogenase-4... 168 1e-39 tr|C9PPV0|C9PPV0_9PAST Tax_Id=667128 (hyfF)SubName: Full=Hydroge... 168 2e-39 tr|C4SQ39|C4SQ39_YERFR Tax_Id=349966 SubName: Full=Hydrogenase-4... 168 2e-39 tr|Q0W2B8|Q0W2B8_UNCMA Tax_Id=351160 SubName: Full=Hydrogenase, ... 168 2e-39 tr|Q2RGG2|Q2RGG2_MOOTA Tax_Id=264732 SubName: Full=NADH dehydrog... 167 4e-39 tr|C8W239|C8W239_DESAS Tax_Id=485916 SubName: Full=NADH/Ubiquino... 167 4e-39 tr|B7J508|B7J508_ACIF2 Tax_Id=243159 (hyfF)SubName: Full=Hydroge... 167 4e-39 tr|B5EKJ6|B5EKJ6_ACIF5 Tax_Id=380394 SubName: Full=NADH dehydrog... 167 4e-39 tr|A1JTZ4|A1JTZ4_YERE8 Tax_Id=393305 (hyfF)SubName: Full=Hydroge... 166 5e-39 tr|C4U4J5|C4U4J5_YERAL Tax_Id=527002 SubName: Full=Hydrogenase-4... 166 5e-39 tr|C4TQM5|C4TQM5_YERKR Tax_Id=527012 SubName: Full=Hydrogenase-4... 166 5e-39 tr|C4SI44|C4SI44_YERMO Tax_Id=349967 SubName: Full=Hydrogenase-4... 166 6e-39 tr|C4UR73|C4UR73_YERRO Tax_Id=527004 SubName: Full=Hydrogenase-4... 166 8e-39 tr|Q6D7T3|Q6D7T3_ERWCT Tax_Id=29471 (hyfF)SubName: Full=Hydrogen... 165 1e-38 tr|Q609T8|Q609T8_METCA Tax_Id=414 SubName: Full=Hydrogenase subu... 164 2e-38 tr|C4S0I1|C4S0I1_YERBE Tax_Id=349968 SubName: Full=Hydrogenase-4... 164 2e-38 tr|C6CD42|C6CD42_DICDC Tax_Id=579405 SubName: Full=NADH/Ubiquino... 164 2e-38 tr|Q20XP3|Q20XP3_RHOPB Tax_Id=316056 SubName: Full=NADH dehydrog... 164 3e-38 tr|C8QMW7|C8QMW7_DICDA Tax_Id=590409 SubName: Full=NADH dehydrog... 164 3e-38 tr|C6CN14|C6CN14_DICZE Tax_Id=561229 SubName: Full=NADH/Ubiquino... 163 4e-38 tr|C6HVM6|C6HVM6_9BACT Tax_Id=412449 SubName: Full=Putative hydr... 163 4e-38 tr|C6QS81|C6QS81_9BACI Tax_Id=581103 SubName: Full=NADH dehydrog... 163 5e-38 tr|B7LKF5|B7LKF5_ESCF3 Tax_Id=585054 (hyfF)SubName: Full=Hydroge... 162 9e-38 tr|B7NQM4|B7NQM4_ECO7I Tax_Id=585057 (hyfF)SubName: Full=Hydroge... 161 2e-37 tr|B6IT63|B6IT63_RHOCS Tax_Id=414684 (hyfF)SubName: Full=Hydroge... 161 2e-37 tr|Q8XBC1|Q8XBC1_ECO57 Tax_Id=83334 (hyfF)SubName: Full=Hydrogen... 160 3e-37 tr|B5Z023|B5Z023_ECO5E Tax_Id=444450 SubName: Full=Hydrogenase-4... 160 3e-37 tr|B1LND6|B1LND6_ECOSM Tax_Id=439855 SubName: Full=Hydrogenase-4... 160 3e-37 tr|B2NNN2|B2NNN2_ECO57 Tax_Id=444451 SubName: Full=Hydrogenase-4... 160 3e-37 >tr|B2HHH6|B2HHH6_MYCMM Tax_Id=216594 (hycQ)SubName: Full=Hydrogenase HycQ;[Mycobacterium marinum] Length = 488 Score = 576 bits (1484), Expect = e-162 Identities = 325/467 (69%), Positives = 325/467 (69%) Query: 22 GGWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL 81 GGWRR GSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL Sbjct: 22 GGWRRATAVLTVLSAVAVLGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL 81 Query: 82 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXX 141 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIW Sbjct: 82 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWVAVEATTVVT 141 Query: 142 XFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTAC 201 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLDVLTAC Sbjct: 142 AFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAAQHAGADGANALNLDVLTAC 201 Query: 202 AAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL 261 AAHLNPAVTR KVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL Sbjct: 202 AAHLNPAVTRLAGGLLLIGYGAKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL 261 Query: 262 IRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXX 321 IRLRPVIDAAVGPGYLRA IAAFLLTVVTDLKRMLAYSSMENMG Sbjct: 262 IRLRPVIDAAVGPGYLRAGLLTVGLTTVLIAAFLLTVVTDLKRMLAYSSMENMGLIAIAA 321 Query: 322 XXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXX 381 KTVLFLAGGQLQSAHDSASIADITAVL Sbjct: 322 AAGTKLAIAALLLHVLAHGIGKTVLFLAGGQLQSAHDSASIADITAVLSRSRVVGVSFAV 381 Query: 382 XXXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAAS 441 MFASEVSIARSLADSGLAWVLG NSRRMLLGAAS Sbjct: 382 GVVVLLGLPPFAMFASEVSIARSLADSGLAWVLGVTLLLMVVAFAALVANSRRMLLGAAS 441 Query: 442 EGAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFGAN 488 EGAPRI CIALGVTAGPLGGLFDAAAGQFGAN Sbjct: 442 EGAPRIAVPATVAAALVTGVVACIALGVTAGPLGGLFDAAAGQFGAN 488 >tr|A0PPT7|A0PPT7_MYCUA Tax_Id=362242 (hycQ)SubName: Full=Hydrogenase HycQ;[Mycobacterium ulcerans] Length = 488 Score = 573 bits (1476), Expect = e-161 Identities = 323/467 (69%), Positives = 325/467 (69%) Query: 22 GGWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL 81 GGWRR GSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL Sbjct: 22 GGWRRATAVLTVLSAVAVLGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTL 81 Query: 82 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXX 141 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIW Sbjct: 82 ATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWVAVEATTVVT 141 Query: 142 XFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTAC 201 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLDVLTAC Sbjct: 142 AFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAAQHAGADGANALNLDVLTAC 201 Query: 202 AAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL 261 AAHLNPAVTR KVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL Sbjct: 202 AAHLNPAVTRLAGGLLLIGYGAKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVL 261 Query: 262 IRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXX 321 IRLRPVIDAAVGPGYLRA IAAFLLTVVTDLKRMLAYSSMENMG Sbjct: 262 IRLRPVIDAAVGPGYLRAGLLTVGLTTVLIAAFLLTVVTDLKRMLAYSSMENMGLIAIAA 321 Query: 322 XXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXX 381 KTVLFLAGGQLQSAHDSASIADITAVL Sbjct: 322 AAGTKLAIAALLLHVLAHGIGKTVLFLAGGQLQSAHDSASIADITAVLSRSRVVGVSFAV 381 Query: 382 XXXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAAS 441 MF+SEVSIARSLA+SGLAWVLG NSRRMLLGAAS Sbjct: 382 GVVVLLGLPPFAMFSSEVSIARSLANSGLAWVLGVTLLLMVVAFAALVANSRRMLLGAAS 441 Query: 442 EGAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFGAN 488 EGAPRI CIALGVTAGPLGGLFDAAAGQFGAN Sbjct: 442 EGAPRIAVPATVAAALVTGVVACIALGVTAGPLGGLFDAAAGQFGAN 488 >tr|A0QMU0|A0QMU0_MYCA1 Tax_Id=243243 SubName: Full=Hydrogenase-4, F subunit, putative;[Mycobacterium avium] Length = 489 Score = 421 bits (1083), Expect = e-116 Identities = 246/465 (52%), Positives = 270/465 (58%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR G G AL Q + VLGGLLRVDAL V MLIVIG VGTLA Sbjct: 23 GWRRLTSTVTVLSAATVLGCGAALSFTVGSQQYFVLGGLLRVDALCVTMLIVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 TWASIGYIDAE GHTD ARLYGAL PAFLAAM +AV ANNIG+IW Sbjct: 83 TWASIGYIDAECADGHTDAGGARLYGALTPAFLAAMVVAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYV+ICSVGIA+AFLGTVLLYF LNLDVL A A Sbjct: 143 FLVGHRRTRTALEATWKYVIICSVGIAIAFLGTVLLYFAARHAGASAALALNLDVLGAHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 L+PAV+R K GLAPFH WLADAHSQAPAPVSALMSGVLLSVA SVLI Sbjct: 203 HTLDPAVSRLAGGLLLIGYGAKAGLAPFHTWLADAHSQAPAPVSALMSGVLLSVAMSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 R+ P++ AA GP +LRA +AA +LTV D+KRMLAYSSMENMG Sbjct: 263 RITPIVGAAAGPTFLRAGLLTVGLVTLFVAALMLTVTGDVKRMLAYSSMENMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AH S +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGVGKTVLFLAGGQLQAAHGSTAIADITGVVQRSHLIGGSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE+++A +LAD+ LAWVLG N+ RMLLG A+ Sbjct: 383 LIVLLGLPPFAMFASELALAHALADARLAWVLGAAMLLIAIAFAALVRNASRMLLGPAAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFGA 487 AP I I LGVTAGPL LF AAGQ GA Sbjct: 443 AAPPITAPTTVTAALLVGVAASIVLGVTAGPLTDLFSTAAGQLGA 487 >tr|Q10883|Q10883_MYCTU Tax_Id=1773 (hycQ)SubName: Full=NADH-ubiquinone oxidoreductase, putative; SubName: Full=POSSIBLE HYDROGENASE HYCQ; EC=1.-.-.-;[Mycobacterium tuberculosis] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|C6DQV0|C6DQV0_MYCTK Tax_Id=478434 SubName: Full=Hydrogenase hycQ;[Mycobacterium tuberculosis] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|A5TYF9|A5TYF9_MYCTA Tax_Id=419947 (hycQ)SubName: Full=Putative hydrogenase HycQ;[Mycobacterium tuberculosis] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|A5WIE1|A5WIE1_MYCTF Tax_Id=336982 SubName: Full=Hydrogenase hycQ;[Mycobacterium tuberculosis] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|A4KNB4|A4KNB4_MYCTU Tax_Id=395095 SubName: Full=Hydrogenase hycQ;[Mycobacterium tuberculosis str. Haarlem] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWIAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|A2VN21|A2VN21_MYCTU Tax_Id=348776 SubName: Full=Hydrogenase hycQ;[Mycobacterium tuberculosis C] Length = 488 Score = 404 bits (1038), Expect = e-110 Identities = 236/464 (50%), Positives = 260/464 (56%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL AM +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|Q7U2V7|Q7U2V7_MYCBO Tax_Id=1765 (hycQ)SubName: Full=POSSIBLE HYDROGENASE HYCQ; EC=1.-.-.-;[Mycobacterium bovis] Length = 488 Score = 402 bits (1032), Expect = e-110 Identities = 235/464 (50%), Positives = 259/464 (55%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL A +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCATVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|C1AJB2|C1AJB2_MYCBT Tax_Id=561275 (hycQ)SubName: Full=Putative hydrogenase;[Mycobacterium bovis] Length = 488 Score = 402 bits (1032), Expect = e-110 Identities = 235/464 (50%), Positives = 259/464 (55%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL A +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCATVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|A1KEQ7|A1KEQ7_MYCBP Tax_Id=410289 (hycQ)SubName: Full=Possible hydrogenase hycQ; EC=1.-.-.-;[Mycobacterium bovis] Length = 488 Score = 402 bits (1032), Expect = e-110 Identities = 235/464 (50%), Positives = 259/464 (55%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWRR +A+G LGGLLR DAL+V+ML+VIG VGTLA Sbjct: 23 GWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLA 82 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 T ASIGYID EL HGH D R ARLYG L PAFL A +AV ANNIG+IW Sbjct: 83 TAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCATVLAVCANNIGVIWVAIEATTVITA 142 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF LNLD+L A Sbjct: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHA 202 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GL PFH WLADAHSQAPAPVSALMSGVLL+VAFSVLI Sbjct: 203 AGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLI 262 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 RLRP++DA GP YLR +A +LTV D+KRMLAYSSME+MG Sbjct: 263 RLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAA 322 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 KTVLFLAGGQLQ+AHDS +IADIT V+ Sbjct: 323 AGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVG 382 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 MFASE++IARSLA+ LAWVLG NS RMLLG + Sbjct: 383 LIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAA 442 Query: 443 GAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGLFDAAAGQFG 486 GAP I ALG+TAGPL L AA G Sbjct: 443 GAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVG 486 >tr|D1A6C9|D1A6C9_THECU Tax_Id=471852 SubName: Full=NADH/Ubiquinone/plastoquinone (Complex I); Flags: Precursor;[Thermomonospora curvata DSM 43183] Length = 572 Score = 253 bits (645), Expect = 5e-65 Identities = 165/423 (39%), Positives = 200/423 (47%), Gaps = 12/423 (2%) Query: 23 GWRRXXXXXXXXXXXXXXGSGIALGLQATPQPHLVLGGLLRVDALSVIMLIVIGAVGTLA 82 GWR GIAL LQ P LR DALS MLIVIGAV TLA Sbjct: 22 GWRGPVRWLGALSSAGVLACGIALSLQQAPPS----APGLRADALSSFMLIVIGAVATLA 77 Query: 83 TWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXX 142 A Y+ AE D R AR YG L F+AAMA+AV A N+G++W Sbjct: 78 MLAGPSYLAAE-----DDARAARRYGVLTQGFIAAMALAVLAANLGVLWVAVEATTIVTA 132 Query: 143 FLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACA 202 FLVGHRRTR A+EA WKYVV+CS GIA+A LG VLL+F L LDVL A A Sbjct: 133 FLVGHRRTRAAVEAAWKYVVVCSAGIALALLGVVLLHFAAAQAGVES---LELDVLAAHA 189 Query: 203 AHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLI 262 A L+P V R K GLAP H WL DAHSQAPAPVSALMSGVLLSVAF ++ Sbjct: 190 ADLDPGVARIAVALLLLGFGTKAGLAPMHAWLPDAHSQAPAPVSALMSGVLLSVAFYAML 249 Query: 263 RLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMGXXXXXXX 322 R++ + D A+GP + R +AA LL D KRMLAYSS+E+MG Sbjct: 250 RVKVIADPALGPAFTRNLLLVLALLSLLVAALLLIAQRDYKRMLAYSSIEHMGLLALGAA 309 Query: 323 XXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIADITAVLXXXXXXXXXXXXX 382 K+VLF+ G + A S+ +A + +L Sbjct: 310 AGGRLALTAVLLHVLGHGLGKSVLFIGSGTILHATGSSRVAAVRGLLARSPLLGGAFGLA 369 Query: 383 XXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXXXXXXXXXXXXXXXNSRRMLLGAASE 442 +FASE+ I R+ G+ W + RM+LG+ Sbjct: 370 LLALLGLPPFSLFASELGIFRAGFQDGIGWAVAVALVLLLVIVAAVGRIGSRMILGSPLS 429 Query: 443 GAP 445 P Sbjct: 430 AQP 432 >tr|C8XAS2|C8XAS2_NAKMY Tax_Id=479431 SubName: Full=NADH/Ubiquinone/plastoquinone (Complex I); Flags: Precursor;[Nakamurella multipartita] Length = 537 Score = 230 bits (586), Expect = 4e-58 Identities = 152/395 (38%), Positives = 191/395 (48%), Gaps = 7/395 (1%) Query: 54 PHLVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPA 113 P LGGLL DALS ML+VIGAV +A A+ G++ EL G D + AL+ Sbjct: 69 PVTALGGLLAADALSAFMLVVIGAVALIAALATPGHLRVELAAGRIDATTRTRHLALVQL 128 Query: 114 FLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFL 173 FLAAMA+AV A +GL+W FLVG R R A EA WKYV+ICS GIA+A L Sbjct: 129 FLAAMALAVLAAGLGLLWVAVELTTVVTAFLVGQGRGRRAAEAAWKYVIICSTGIALALL 188 Query: 174 GTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGW 233 GT LL L+ LTA L+P VTR K GLAP H W Sbjct: 189 GTFLL----NAAAERAGASLDWLSLTAAGPDLDPGVTRIAVVLLVLGFGTKAGLAPMHAW 244 Query: 234 LADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAA 293 L DAHSQAPAPVSALMSGVL+SVAF ++R++ V D A+GP + RA +AA Sbjct: 245 LPDAHSQAPAPVSALMSGVLISVAFYAVLRVKVVADLALGPDFTRALLIVLALASIALAA 304 Query: 294 FLLTVVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQL 353 LL D KRMLAYSS+ENM K+ LF+A G++ Sbjct: 305 SLLIAQRDYKRMLAYSSIENMALLALGAAIGSPLAIAAVLLHILGHGLVKSGLFVAAGRI 364 Query: 354 QSAHDSASIADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWV 413 ++ I + ++ +FASE+ IAR+ +GL WV Sbjct: 365 LQLTGTSRIDHVRGLVAREPVLGWCFGLGILAIVAFPPFSLFASELGIARAGFAAGLGWV 424 Query: 414 LGXXXXXXXXXXXXXXXNSRRMLLG---AASEGAP 445 ++ RMLLG A + GAP Sbjct: 425 TAAALLLVLVCAAALIGHTSRMLLGAPAATANGAP 459 >tr|A1SQ78|A1SQ78_NOCSJ Tax_Id=196162 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5;[Nocardioides sp.] Length = 428 Score = 218 bits (554), Expect = 2e-54 Identities = 146/431 (33%), Positives = 192/431 (44%), Gaps = 13/431 (3%) Query: 58 LGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAA 117 L GLLRVDALS ML VIG+VG A W G +D H +Y L FL A Sbjct: 11 LDGLLRVDALSAFMLTVIGSVGLTAAW---GALDPLRPRDH-------VYSVLALLFLGA 60 Query: 118 MAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVL 177 M++AV A+N+G++W F+VGH RTR A+EA WKYVV+ SVG+A+AFLG VL Sbjct: 61 MSLAVLADNLGVLWIAVEATTIATAFMVGHHRTRRAIEAAWKYVVLGSVGVAIAFLGIVL 120 Query: 178 LYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADA 237 LY L+ VL L+P+V R K GLAP H WL DA Sbjct: 121 LY---AATRSAGEPTLSWSVLATTHPDLDPSVVRVAAALAILGFATKAGLAPMHSWLPDA 177 Query: 238 HSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLT 297 HSQAPAPVS LMSGVLL+VAF ++R++ + +G G +R +AA L+ Sbjct: 178 HSQAPAPVSGLMSGVLLAVAFYAILRVQAIATPVIGTGLMRGLLVTAGLLSLTLAALLVI 237 Query: 298 VVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAH 357 DLKRMLAYSS+E+MG K+ F+A G++ +A Sbjct: 238 RQRDLKRMLAYSSIEHMGLLALAAAAGGRLAIAGALLHVLGHGLAKSSTFVASGRILAAE 297 Query: 358 DSASIADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWVLGXX 417 + ++ADI ++ +F SEV+I GL W + Sbjct: 298 GTTTMADIHGLVARRPGVAVPFLVGVVALLGLPPFSLFFSEVAIVVGGVQQGLGWAMAVA 357 Query: 418 XXXXXXXXXXXXXNSRRMLLGAASEGAPRIXXXXXXXXXXXXXXXXCIALGVTAGPLGGL 477 + ML G A+ +G AGP L Sbjct: 358 VLMLLVMFVAMSRHVVAMLFGGAAAATDPDRAPYGPRLPLVLALAATGVVGFVAGPFATL 417 Query: 478 FDAAAGQFGAN 488 D AA G + Sbjct: 418 LDRAASVLGGS 428 >tr|C9R5L9|C9R5L9_AGGAD Tax_Id=668336 SubName: Full=Hydrogenase-4 component F;[Aggregatibacter actinomycetemcomitans serotype C] Length = 512 Score = 181 bits (460), Expect = 1e-43 Identities = 114/357 (31%), Positives = 162/357 (45%) Query: 58 LGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAA 117 L + +D+LS I L +I VGTLA SIGYI EL+ GH +D Y + F Sbjct: 63 LNNWVYIDSLSAIFLGLIAVVGTLAGVYSIGYIGTELQEGHLSLKDFYNYHGFLHLFFFT 122 Query: 118 MAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVL 177 M I+V NN+ L+W FLVG + +T+LEA WKY++ICSVG+A GT+L Sbjct: 123 MIISVITNNVILMWVAIEATTLSSAFLVGTYKQKTSLEAAWKYIIICSVGVAFGLYGTIL 182 Query: 178 LYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADA 237 + + L AA LNP + K GL P H WL+DA Sbjct: 183 TFANGNNLLADPSQAIFWSALNQQAAGLNPMLMYIAFVFILIGFGTKCGLFPMHTWLSDA 242 Query: 238 HSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLT 297 HS+AP+PVSA++S VLL+ A V++R ++ AVG Y + +AA + Sbjct: 243 HSEAPSPVSAILSAVLLNCAMLVVLRYYILVSKAVGSSYPQTLLLVFGLLSVLVAALFII 302 Query: 298 VVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAH 357 V D+KR+LAYSS+ENMG KT+LF A G + + Sbjct: 303 VQFDIKRLLAYSSIENMGLISFAFGLGGPIGVFAGLLHTINHSLAKTLLFCASGNILLKY 362 Query: 358 DSASIADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWVL 414 + + + + +F SE SIA + +G W++ Sbjct: 363 KTRDMNQVRGLWRVAPVSAVLFAGGALALGGLPPFNVFVSEFSIAVAGIYAGKTWLV 419 >tr|C0ATP1|C0ATP1_9ENTR Tax_Id=471881 SubName: Full=Putative uncharacterized protein;[Proteus penneri ATCC 35198] Length = 522 Score = 173 bits (438), Expect = 5e-41 Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 3/274 (1%) Query: 45 ALGLQATPQPH---LVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDR 101 ALG A H L + VD+L + L ++G +G L SIGY+ E++ G Sbjct: 50 ALGTVADVMSHGEILAAANWVHVDSLGALFLAILGIIGFLTGLYSIGYMSHEVDEGEISV 109 Query: 102 RDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYV 161 R Y FL M +A+++NN+ L+W FLVG R++LEA WKY+ Sbjct: 110 RTLCNYYGFFHLFLFTMLLAITSNNLILMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYI 169 Query: 162 VICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXX 221 +ICSVG+A GT+L+Y + + L+P + Sbjct: 170 IICSVGVAFGLFGTILVYANAASFMPDPDQAIFWTEVLKYTDQLDPTLMHLAFVFILIGF 229 Query: 222 XXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXX 281 K GL P H WL DAHS+AP+PVSAL+S VLL+ A ++IR +IDAA+G + R Sbjct: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLIIIRYYIIIDAAIGSEFTRNLL 289 Query: 282 XXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMG 315 IAAF + + D+KR+LAYSS+ENMG Sbjct: 290 LIFGFLSVAIAAFFILIQRDMKRLLAYSSVENMG 323 >tr|B4EXC2|B4EXC2_PROMH Tax_Id=529507 (hyfF)SubName: Full=Hydrogenase-4 component F;[Proteus mirabilis] Length = 522 Score = 172 bits (437), Expect = 7e-41 Identities = 99/274 (36%), Positives = 140/274 (51%), Gaps = 3/274 (1%) Query: 45 ALGLQATPQPH---LVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDR 101 ALG A H L + VD+L + L ++G +G L SIGY++ E++ G Sbjct: 50 ALGTVADVMSHGEILAAAKWVHVDSLGALFLAILGIIGFLTGLYSIGYMNHEVDEGEISV 109 Query: 102 RDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYV 161 R Y FL M +A+++NN+ L+W FLVG R++LEA WKY+ Sbjct: 110 RTLCNYYGFFHLFLFTMLLAITSNNLILMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYI 169 Query: 162 VICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXX 221 +ICSVG+A GT+L+Y + + L+P + Sbjct: 170 IICSVGVAFGLFGTILVYANAASFMPDPDQAIFWTEVLKYTHQLDPTLMHLAFVFILIGF 229 Query: 222 XXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXX 281 K GL P H WL DAHS+AP+PVSAL+S VLL+ A ++IR +IDAA+G + R Sbjct: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLIIIRYYIIIDAAIGTEFTRNLL 289 Query: 282 XXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMG 315 IAAF + + D+KR+LAYSS+ENMG Sbjct: 290 LIFGFLSVAIAAFFILIQRDMKRLLAYSSVENMG 323 >tr|C2LLC9|C2LLC9_PROMI Tax_Id=525369 (hyfF)SubName: Full=Hydrogenase 4 subunit F;[Proteus mirabilis ATCC 29906] Length = 522 Score = 172 bits (437), Expect = 7e-41 Identities = 99/274 (36%), Positives = 140/274 (51%), Gaps = 3/274 (1%) Query: 45 ALGLQATPQPH---LVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDR 101 ALG A H L + VD+L + L ++G +G L SIGY++ E++ G Sbjct: 50 ALGTVADVMSHGEILAAAKWVHVDSLGALFLAILGIIGFLTGLYSIGYMNHEVDEGEISV 109 Query: 102 RDARLYGALMPAFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYV 161 R Y FL M +A+++NN+ L+W FLVG R++LEA WKY+ Sbjct: 110 RTLCNYYGFFHLFLFTMLLAITSNNLILMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYI 169 Query: 162 VICSVGIAVAFLGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXX 221 +ICSVG+A GT+L+Y + + L+P + Sbjct: 170 IICSVGVAFGLFGTILVYANAASFMPDPDQAIFWTEVLKYTHQLDPTLMHLAFVFILIGF 229 Query: 222 XXKVGLAPFHGWLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXX 281 K GL P H WL DAHS+AP+PVSAL+S VLL+ A ++IR +IDAA+G + R Sbjct: 230 GTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLIIIRYYIIIDAAIGTEFTRNLL 289 Query: 282 XXXXXXXXXIAAFLLTVVTDLKRMLAYSSMENMG 315 IAAF + + D+KR+LAYSS+ENMG Sbjct: 290 LIFGFLSVAIAAFFILIQRDMKRLLAYSSVENMG 323 >tr|C6ANV9|C6ANV9_AGGAN Tax_Id=634176 SubName: Full=Hydrogenase-4 component F;[Aggregatibacter aphrophilus] Length = 512 Score = 169 bits (428), Expect = 7e-40 Identities = 107/357 (29%), Positives = 159/357 (44%) Query: 58 LGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAA 117 LG + VD+LS I L +I VG LA SI YI+ E GH D + Y + F Sbjct: 63 LGNWIHVDSLSAIFLALISVVGGLAGVYSIAYINREFNEGHIDLKTYCNYYGFLHLFFFT 122 Query: 118 MAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVL 177 M ++V+ NN+ L+W FLVG + +T+LEA WKY++ICSVG+A GT+L Sbjct: 123 MILSVTTNNLILMWAGIEATTLSSAFLVGTYKQKTSLEAAWKYIIICSVGVAFGLFGTIL 182 Query: 178 LYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADA 237 + + + A+ L+ + K GL P H WL DA Sbjct: 183 TFSNGTNLLADPSQAIFWTAVNQQASDLHHGLMYLAFAFILVGFGTKCGLFPMHTWLPDA 242 Query: 238 HSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLT 297 HS+AP+PVSA++S VLL+ A V++R ++ AVG Y + +A+F + Sbjct: 243 HSEAPSPVSAVLSAVLLNCAMLVVLRYYILVSKAVGSDYPQTLMLVFGLLSTGVASFFII 302 Query: 298 VVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAH 357 + D+KR LAY S+ENMG K +LF A G + + Sbjct: 303 MQHDIKRKLAYHSIENMGLISFAFGLGGPVGAFAGLLHTITHSLAKALLFCASGNILLKY 362 Query: 358 DSASIADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWVL 414 S I +++ + MF SE +IA + +G W++ Sbjct: 363 RSRDIHEVSGLWRTMPFTAVLFAGGALALGGMPPFGMFTSEFAIAVAGIYAGKTWLI 419 >tr|Q2C1Q8|Q2C1Q8_9GAMM Tax_Id=121723 SubName: Full=NADH dehydrogenase subunit N; EC=1.6.5.3;[Photobacterium sp. SKA34] Length = 525 Score = 169 bits (428), Expect = 7e-40 Identities = 96/265 (36%), Positives = 135/265 (50%) Query: 51 TPQPHLVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGAL 110 T P L L +D LS + + V+G VG + S+GYI E + G D + LY L Sbjct: 59 TQGPLLALDSWFYLDGLSGLFIAVLGVVGFITGLYSLGYIGHEYKEGEIDGKKVSLYYGL 118 Query: 111 MPAFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAV 170 FLA M I+V++NN+ ++W FLVG R++LEA WKY+VICSVG+A Sbjct: 119 FNLFLATMLISVASNNVIMMWVAIEATTVSSVFLVGLYGKRSSLEAAWKYIVICSVGVAF 178 Query: 171 AFLGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPF 230 G++L Y + + A L+P + K GL P Sbjct: 179 GLFGSILAYSNAAAVLSPIDHPVLWTTIKENATLLDPTLVHLSFVFIIIGFGTKTGLFPM 238 Query: 231 HGWLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXX 290 H WL DAHS+AP+PVSAL+S LL+ A V++R + A+GP + + Sbjct: 239 HAWLPDAHSEAPSPVSALLSAGLLNCALLVILRYYIITVKAIGPHFPQMLLMTFGFLSVA 298 Query: 291 IAAFLLTVVTDLKRMLAYSSMENMG 315 +AAF + D+KR+LAYSS+ENMG Sbjct: 299 VAAFFIITQRDIKRLLAYSSVENMG 323 >tr|C4T2Q9|C4T2Q9_YERIN Tax_Id=349965 SubName: Full=Hydrogenase-4 component F;[Yersinia intermedia ATCC 29909] Length = 543 Score = 168 bits (426), Expect = 1e-39 Identities = 101/353 (28%), Positives = 159/353 (45%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGIIGFITGIYSLGYMRHEVNNGEITVGTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V++ A L+P++ K GL P H WL DAHS+A Sbjct: 190 AANVLADPGSAIFWTVVSEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWVL 414 + I ++ +F SE + + ++G W++ Sbjct: 370 MGAIKGIIRVAPLTAVLLAGGALALAGMPPFNVFISEFMVVAAAINAGHIWLV 422 >tr|C9PPV0|C9PPV0_9PAST Tax_Id=667128 (hyfF)SubName: Full=Hydrogenase subunit; EC=1.12.7.2;[Pasteurella dagmatis ATCC 43325] Length = 508 Score = 168 bits (425), Expect = 2e-39 Identities = 103/302 (34%), Positives = 144/302 (47%) Query: 64 VDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAVS 123 VD+LS I + +IG VG LA SIGY+ ELE G + + Y F M ++V Sbjct: 66 VDSLSAIFVGIIGIVGLLAGLYSIGYMKKELELGEFNEQQYGNYYGFFHLFFFTMLLSVM 125 Query: 124 ANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXXX 183 NNI ++W FLVG RT+LEA WKY++ICSVG+A GT+L++ Sbjct: 126 TNNIVVMWVGIEATTLSSAFLVGAYGKRTSLEAAWKYIIICSVGVAFGLYGTLLVFADAS 185 Query: 184 XXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAPA 243 + + A L+P + K GL P H WL DAHS+AP+ Sbjct: 186 NILADPEQAIFWTKINENATALDPHLIHLAFIFILIGFGTKCGLFPMHTWLPDAHSEAPS 245 Query: 244 PVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDLK 303 PVSA++SG+LL+ A V++R + + AVGP + + IAA + D+K Sbjct: 246 PVSAILSGILLNCAMLVVLRYYILTNKAVGPEFAQNLLLIFGIISVAIAALFIIAQRDIK 305 Query: 304 RMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSASIA 363 R+LAYSS+ENMG KT+LF A G + + S + Sbjct: 306 RLLAYSSIENMGLIAVGFGIGGPLGVFAGLLHTINHSLAKTLLFCASGNILVKYHSRDMQ 365 Query: 364 DI 365 DI Sbjct: 366 DI 367 >tr|C4SQ39|C4SQ39_YERFR Tax_Id=349966 SubName: Full=Hydrogenase-4 component F;[Yersinia frederiksenii ATCC 33641] Length = 545 Score = 168 bits (425), Expect = 2e-39 Identities = 98/314 (31%), Positives = 148/314 (47%) Query: 56 LVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFL 115 LV L +D+LS + L ++G +G + S+GY+ E+ +G Y FL Sbjct: 64 LVAHNWLHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCSYYGFFHLFL 123 Query: 116 AAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGT 175 M + V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GT Sbjct: 124 FTMLLVVTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGT 183 Query: 176 VLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLA 235 VL+Y + V+ A L+P++ K GL P H WL Sbjct: 184 VLVYANAANVLADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLP 243 Query: 236 DAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFL 295 DAHS+AP+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF Sbjct: 244 DAHSEAPSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFF 303 Query: 296 LTVVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQS 355 + D+KR+LAYSS+ENMG KT+LF G + Sbjct: 304 ILAQRDMKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTLNHSLAKTLLFCGSGNVLL 363 Query: 356 AHDSASIADITAVL 369 + + + I ++ Sbjct: 364 KYGTRDMGAIKGII 377 >tr|Q0W2B8|Q0W2B8_UNCMA Tax_Id=351160 SubName: Full=Hydrogenase, membrane subunit 1-like protein (EchA-like);[Uncultured methanogenic archaeon RC-I] Length = 487 Score = 168 bits (425), Expect = 2e-39 Identities = 93/259 (35%), Positives = 131/259 (50%) Query: 57 VLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLA 116 V GGL VD+L ML++I +G A SIGY+ E + D R Y F+ Sbjct: 54 VSGGLWYVDSLGAYMLVIISFIGLAAAIYSIGYLGYEYKEKKIDLGRLRYYFTFFHVFIF 113 Query: 117 AMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTV 176 M + +++N+G++W FLVG T++EA WKY++ICSVGI +A LGT+ Sbjct: 114 TMLLVCTSSNLGIMWIAIEATTLASAFLVGFYNKDTSVEAAWKYIIICSVGITLALLGTI 173 Query: 177 LLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLAD 236 LLY LN +L A L+P + + K G AP H WL D Sbjct: 174 LLYASSVNTLGESADALNWPMLAEKAKSLDPTLLKIAFILVIIGYGTKAGFAPMHTWLPD 233 Query: 237 AHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLL 296 AHS+AP P+S L+SGVLL+ A ++R + A+GP + AA + Sbjct: 234 AHSEAPTPISGLLSGVLLNCAMYGILRYHIITTNALGPDFSGTLLIVFGLLSLAAAAAFI 293 Query: 297 TVVTDLKRMLAYSSMENMG 315 + D KR+LAYSS+E+MG Sbjct: 294 IIQKDYKRLLAYSSIEHMG 312 >tr|Q2RGG2|Q2RGG2_MOOTA Tax_Id=264732 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5;[Moorella thermoacetica] Length = 495 Score = 167 bits (422), Expect = 4e-39 Identities = 92/263 (34%), Positives = 133/263 (50%) Query: 53 QPHLVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMP 112 Q L +L D+L+ I++++IG +G L + SIGY+ +LEHG D R Y Sbjct: 58 QTLFALNQMLYADSLTAILVLIIGVLGFLDGFYSIGYLRHDLEHGEADERSVCSYYGFFH 117 Query: 113 AFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAF 172 FL M ++ +NNI ++W FLVG + +T+ E WKYV+ICSVG+A A Sbjct: 118 IFLFTMLLSAISNNIAIMWAAVEATTLGSAFLVGFYKYKTSAEGAWKYVLICSVGLAFAL 177 Query: 173 LGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHG 232 GT+L Y + + A L+P V + K GL P H Sbjct: 178 YGTILTYSDAFTILQDAHRAMLWTEIAGMAHSLDPQVMKLAFVFILLGFGTKAGLFPMHT 237 Query: 233 WLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIA 292 WL DAHS+AP+P SA++SGVLL A +IR + +G + + +A Sbjct: 238 WLPDAHSEAPSPASAMLSGVLLKCALFAIIRYYAIALQVLGRSFPQTLLLIFGLLSVCVA 297 Query: 293 AFLLTVVTDLKRMLAYSSMENMG 315 AF + V D+KR LAYSS+E++G Sbjct: 298 AFFILVQNDIKRKLAYSSVEHIG 320 >tr|C8W239|C8W239_DESAS Tax_Id=485916 SubName: Full=NADH/Ubiquinone/plastoquinone (Complex I); Flags: Precursor;[Desulfotomaculum acetoxidans] Length = 489 Score = 167 bits (422), Expect = 4e-39 Identities = 98/312 (31%), Positives = 153/312 (49%) Query: 57 VLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLA 116 V L +DALS + + +IG VGT+ ++ Y+ + E G ++R ++ L+ FLA Sbjct: 55 VKSSFLVLDALSSVFVFIIGVVGTICCLYAVSYLRRDQERGELEQRRTGIFFGLLHLFLA 114 Query: 117 AMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTV 176 +M +AV A+N+G++W LVG + +LEA WKY++IC+VGIA A LG + Sbjct: 115 SMYLAVLADNLGVMWVAIEATTIVSALLVGFYGHKESLEAAWKYIIICTVGIAFAMLGII 174 Query: 177 LLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLAD 236 Y+ L+ +L + A ++P++ + K GL P H WL D Sbjct: 175 FTYYAVRGISGGEEISLSWRLLFSMAGQIDPSLMKLAFIFVLVGYGTKAGLFPLHTWLPD 234 Query: 237 AHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLL 296 AHSQAP+PVSAL+SGVLL+ A +IR + +VG + + + Sbjct: 235 AHSQAPSPVSALLSGVLLNCAVYAIIRFHLLTVKSVGGNFSAKLLIIFGLLSMVGSLPFI 294 Query: 297 TVVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSA 356 V D+KR+LAYSS+E++G K+VLFL+ G L Sbjct: 295 LVQKDIKRLLAYSSVEHIGIIVLGVGIGGVLGYTGALLHLINHALGKSVLFLSAGTLTQK 354 Query: 357 HDSASIADITAV 368 ++S I + + Sbjct: 355 YNSKLIPKMKGI 366 >tr|B7J508|B7J508_ACIF2 Tax_Id=243159 (hyfF)SubName: Full=Hydrogenase-4, F subunit;[Acidithiobacillus ferrooxidans] Length = 484 Score = 167 bits (422), Expect = 4e-39 Identities = 91/257 (35%), Positives = 130/257 (50%) Query: 59 GGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAM 118 GG VD LS+++++V G VG W S Y+ E H R+ RLY A+ FLA M Sbjct: 58 GGQFMVDDLSIVLVLVDGVVGLSTAWFSRNYMLHETVHWSLSRQRVRLYHAMFQTFLATM 117 Query: 119 AIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLL 178 +A+ NN+G++W LV RT LEA WKY ++C VG+A+A GT+LL Sbjct: 118 LLALLTNNMGILWVAMEGATLSTVLLVSLFRTAEGLEAAWKYFILCGVGLAMALFGTILL 177 Query: 179 YFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAH 238 YF L L A L P V K+GL P + WL DAH Sbjct: 178 YFAAQKIMGHGADALLWTHLAAVRHELEPQVMAIAFIFMLVGYGTKIGLTPLNNWLPDAH 237 Query: 239 SQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTV 298 + P+ VSA++SG+LL+VA ++R + ++D A+G + +A F + Sbjct: 238 ASGPSSVSAVLSGLLLNVALYAILRAKVLVDGALGRDFASHLLMGFGLLSLLVAGFSMLR 297 Query: 299 VTDLKRMLAYSSMENMG 315 D+KR+ AYSS+E+MG Sbjct: 298 QRDVKRLFAYSSIEHMG 314 >tr|B5EKJ6|B5EKJ6_ACIF5 Tax_Id=380394 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5; Flags: Precursor;[Acidithiobacillus ferrooxidans] Length = 484 Score = 167 bits (422), Expect = 4e-39 Identities = 91/257 (35%), Positives = 130/257 (50%) Query: 59 GGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAM 118 GG VD LS+++++V G VG W S Y+ E H R+ RLY A+ FLA M Sbjct: 58 GGQFMVDDLSIVLVLVDGVVGLSTAWFSRNYMLHETVHWSLSRQRVRLYHAMFQTFLATM 117 Query: 119 AIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLL 178 +A+ NN+G++W LV RT LEA WKY ++C VG+A+A GT+LL Sbjct: 118 LLALLTNNMGILWVAMEGATLSTVLLVSLFRTAEGLEAAWKYFILCGVGLAMALFGTILL 177 Query: 179 YFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAH 238 YF L L A L P V K+GL P + WL DAH Sbjct: 178 YFAAQKIMGHGADALLWTHLAAVRHELEPQVMAIAFIFMLVGYGTKIGLTPLNNWLPDAH 237 Query: 239 SQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTV 298 + P+ VSA++SG+LL+VA ++R + ++D A+G + +A F + Sbjct: 238 ASGPSSVSAVLSGLLLNVALYAILRAKVLVDGALGRDFASHLLMGFGLLSLLVAGFSMLR 297 Query: 299 VTDLKRMLAYSSMENMG 315 D+KR+ AYSS+E+MG Sbjct: 298 QRDVKRLFAYSSIEHMG 314 >tr|A1JTZ4|A1JTZ4_YERE8 Tax_Id=393305 (hyfF)SubName: Full=Hydrogenase-4 component F; Flags: Precursor;[Yersinia enterocolitica serotype O:8 / biotype 1B] Length = 545 Score = 166 bits (421), Expect = 5e-39 Identities = 96/308 (31%), Positives = 146/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V+ A L+P++ K GL P H WL DAHS+A Sbjct: 190 AANVLADPSSAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I ++ Sbjct: 370 MGAIKGII 377 >tr|C4U4J5|C4U4J5_YERAL Tax_Id=527002 SubName: Full=Hydrogenase-4 component F;[Yersinia aldovae ATCC 35236] Length = 545 Score = 166 bits (421), Expect = 5e-39 Identities = 96/308 (31%), Positives = 146/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V+ A L+P++ K GL P H WL DAHS+A Sbjct: 190 AANVLADPGCAIFWTVVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I ++ Sbjct: 370 MGAIRGII 377 >tr|C4TQM5|C4TQM5_YERKR Tax_Id=527012 SubName: Full=Hydrogenase-4 component F;[Yersinia kristensenii ATCC 33638] Length = 543 Score = 166 bits (421), Expect = 5e-39 Identities = 95/308 (30%), Positives = 146/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L+++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLVILGVIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + A L+P++ K GL P H WL DAHS+A Sbjct: 190 AANVLADPSSAIFWTAVAEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTMNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I ++ Sbjct: 370 MGAIKGII 377 >tr|C4SI44|C4SI44_YERMO Tax_Id=349967 SubName: Full=Hydrogenase-4 component F;[Yersinia mollaretii ATCC 43969] Length = 543 Score = 166 bits (420), Expect = 6e-39 Identities = 96/308 (31%), Positives = 147/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGIIGFITGLYSLGYMRHEVNNGEITVGTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V++ A L+P++ K GL P H WL DAHS+A Sbjct: 190 AANVLADPGSAIFWTVVSEHAKELDPSLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I ++ Sbjct: 370 MGAIKGII 377 >tr|C4UR73|C4UR73_YERRO Tax_Id=527004 SubName: Full=Hydrogenase-4 component F;[Yersinia rohdei ATCC 43380] Length = 545 Score = 166 bits (419), Expect = 8e-39 Identities = 96/308 (31%), Positives = 145/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGIIGFITGLYSLGYMRHEVNNGEITVSTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V+ A L+P + K GL P H WL DAHS+A Sbjct: 190 AANVLSDPGSAIFWTVVAEHAKELDPTLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++AF + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSAFFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVLAALFHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I ++ Sbjct: 370 MGAIKGII 377 >tr|Q6D7T3|Q6D7T3_ERWCT Tax_Id=29471 (hyfF)SubName: Full=Hydrogenase-4 component F; EC=1.-.-.-;[Erwinia carotovora subsp. atroseptica] Length = 537 Score = 165 bits (417), Expect = 1e-38 Identities = 95/308 (30%), Positives = 146/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +DALS++ L ++G V + SIGY+ E++ G Y F+ M + Sbjct: 70 LHMDALSLLFLAILGIVSFITGLYSIGYMRHEVDDGEVSVSGLCNYYGFFHLFVFTMLLT 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 +++NN+ ++W FLVG R++LEA WKY++ICSVG+A GT+L+Y Sbjct: 130 ITSNNLIMMWAAVEATTLSSAFLVGTYNQRSSLEAAWKYIIICSVGVAFGLFGTILVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + AA L+P + + K GL P H WL DAHS+A Sbjct: 190 ATNILANPDDAIFWTDVLQHAALLDPVLMQLAFVFVLIGFGTKAGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A +++R +I+ +G + +AAF + V TD Sbjct: 250 PSPVSALLSAVLLNCALLIILRYNIIINGTIGNRFTSTLLIVFGLLSIAVAAFFILVQTD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 IKRLLAYSSVENMGLIAVALGIGGPLGVLAAMLHTLNHSLGKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 I + +L Sbjct: 370 ITVVKGML 377 >tr|Q609T8|Q609T8_METCA Tax_Id=414 SubName: Full=Hydrogenase subunit; EC=1.18.99.1;[Methylococcus capsulatus] Length = 488 Score = 164 bits (416), Expect = 2e-38 Identities = 90/253 (35%), Positives = 129/253 (50%) Query: 63 RVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIAV 122 RVDA +V ++++ VGT S Y+ E EHG + RLY A+ F+ M + + Sbjct: 63 RVDAFNVYLIVLTAFVGTTTAMFSAPYMANEREHGRVNAARMRLYHAMYQGFMLTMYLVL 122 Query: 123 SANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFXX 182 + NN+GL+W LV R+ ++EA WKY ++C VGIA A GTVLLYF Sbjct: 123 TTNNLGLMWVAMEGATLATVLLVSLYRSPESIEAAWKYFILCGVGIAQALFGTVLLYFAA 182 Query: 183 XXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQAP 242 L VL A AA LNP V K+GL P H WL DAHS+ P Sbjct: 183 GQVEGMGEYGLQWSVLHAHAAELNPTVMSIAFVFLLVGYGTKIGLVPLHNWLPDAHSEGP 242 Query: 243 APVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTDL 302 P+SA++SG+LL+ A ++R + ++D ++ +AA L D+ Sbjct: 243 TPMSAILSGLLLNDALYAVVRSKMLVDGSLQSQLAGHLMMGFGLLSFLVAALFLHRQRDI 302 Query: 303 KRMLAYSSMENMG 315 KR+ +YSS+E+MG Sbjct: 303 KRLFSYSSIEHMG 315 >tr|C4S0I1|C4S0I1_YERBE Tax_Id=349968 SubName: Full=Hydrogenase-4 component F;[Yersinia bercovieri ATCC 43970] Length = 545 Score = 164 bits (416), Expect = 2e-38 Identities = 100/353 (28%), Positives = 155/353 (43%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + S+GY+ E+ +G Y FL M + Sbjct: 70 LHIDSLSALFLAILGIIGFITGLYSLGYMRHEVNNGEITVGTLCNYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLILMWVGIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + V+ A L+P + K GL P H WL DAHS+A Sbjct: 190 AASVLADPGSAIFWTVVAEHAKELDPRLMHLAFVFILIGFGTKTGLFPMHSWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V+IR +I AA+GP + + ++A + D Sbjct: 250 PSPTSALLSAVLLNCALLVIIRYYIIISAAIGPHFPQMLLLVFGMMSVAVSALFILAQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGVVAALFHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVLXXXXXXXXXXXXXXXXXXXXXXXXMFASEVSIARSLADSGLAWVL 414 + I ++ +F SE + + +G W++ Sbjct: 370 MGAIKGIIRVAPLTAVLLAGGALALAGMPPFSLFISEFMLVAATIKAGHLWLV 422 >tr|C6CD42|C6CD42_DICDC Tax_Id=579405 SubName: Full=NADH/Ubiquinone/plastoquinone (Complex I); Flags: Precursor;[Dickeya dadantii] Length = 538 Score = 164 bits (415), Expect = 2e-38 Identities = 96/308 (31%), Positives = 145/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G + SIGY+ EL+ G Y FL M + Sbjct: 70 LHLDSLSALFLAILGVIGFITGLYSIGYMRHELDGGEISLPTLCYYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 +++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 ITSNNLILMWAAIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + A L+ + K GL P H WL DAHS+A Sbjct: 190 AANVMTEPGNAIFWTEVLKHAGELDGTLMHLAFIFILIGFGTKTGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SA++S VLL+ A V++R +I AA+GP + + +AAFL+ V D Sbjct: 250 PSPTSAMLSAVLLNCALLVIVRYTILISAAIGPEFPQRLLLVFGLLSVAVAAFLILVQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVAIGIGGPLGILAALLHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + + +L Sbjct: 370 MDAVKGIL 377 >tr|Q20XP3|Q20XP3_RHOPB Tax_Id=316056 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5;[Rhodopseudomonas palustris] Length = 512 Score = 164 bits (414), Expect = 3e-38 Identities = 102/314 (32%), Positives = 145/314 (46%), Gaps = 1/314 (0%) Query: 56 LVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFL 115 + G L VD L+ I + +IG VG L + SIGYI ++ HG +LY FL Sbjct: 63 MAFGDWLMVDPLAAIFVGLIGVVGCLTGFYSIGYIRHDVAHGELTPWKQKLYYGFFNLFL 122 Query: 116 AAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGT 175 M + V+ANNI ++W FLVG T+LEA WKY++ICSVG+A GT Sbjct: 123 FTMLLVVTANNIVMMWVGIEATTLGSAFLVGIYGKGTSLEAAWKYLIICSVGVAFGLYGT 182 Query: 176 VLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLA 235 VL + L ++ A A L+P + + K G+ P H WL Sbjct: 183 VLTFANAAASIDPHQAVLWTSIM-AHAQELDPTLIKIAFVFVLIGFGTKAGIFPMHAWLP 241 Query: 236 DAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFL 295 DAHS+AP+PVS L+SGVLL V+IR V A+GP + ++ I+AFL Sbjct: 242 DAHSEAPSPVSGLLSGVLLKCGLFVIIRYYAVTIKAIGPEFPQSMLLVLGVLTVAISAFL 301 Query: 296 LTVVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQS 355 + V D KR LAY S+E++G K +LF G + Sbjct: 302 VFVQHDFKRKLAYHSIEHVGLIVIGLGVGGPLGIAAALLHTINHSFTKALLFCGSGNVLQ 361 Query: 356 AHDSASIADITAVL 369 + + + + +L Sbjct: 362 KYGTRDLRSVKGIL 375 >tr|C8QMW7|C8QMW7_DICDA Tax_Id=590409 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5; Flags: Precursor;[Dickeya dadantii Ech586] Length = 548 Score = 164 bits (414), Expect = 3e-38 Identities = 96/308 (31%), Positives = 145/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G L S+GY+ E++ G Y FL M + Sbjct: 70 LHLDSLSALFLAILGVIGFLTGLYSMGYMRHEVDSGEVSVTTLCHYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 +++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 ITSNNLILMWAAIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + A L+ + K GL P H WL DAHS+A Sbjct: 190 AANVMAEPGNAIFWTEVLKHAGELDSTLMHLAFIFILIGFGTKTGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V++R +I AA+GP + + +AAFL+ V D Sbjct: 250 PSPTSALLSAVLLNCALLVIVRYTILISAAIGPEFPQRLLLVFGLLSVAVAAFLILVQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGILAALLHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + + +L Sbjct: 370 MDAVKGIL 377 >tr|C6CN14|C6CN14_DICZE Tax_Id=561229 SubName: Full=NADH/Ubiquinone/plastoquinone (Complex I); Flags: Precursor;[Dickeya zeae] Length = 553 Score = 163 bits (413), Expect = 4e-38 Identities = 96/308 (31%), Positives = 145/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G L S+GY+ E++ G Y FL M + Sbjct: 70 LHLDSLSALFLAILGVIGFLTGLYSMGYMRHEVDSGEVSVTTLCHYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 +++NN+ L+W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 ITSNNLILMWAAIEATTLSSAFLVGLYGQRSSLEAAWKYIIICTVGVAFGLYGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + A L+ + K GL P H WL DAHS+A Sbjct: 190 AANVMAEPGNAIFWTEVLQHAGELDSTLMHLAFIFILIGFGTKTGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+P SAL+S VLL+ A V++R +I AA+GP + + +AAFL+ V D Sbjct: 250 PSPTSALLSAVLLNCALLVIVRYTILITAAIGPEFPQRLLLVFGLLSVAVAAFLILVQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLIAVALGIGGPLGILAALLHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + + +L Sbjct: 370 MDAVKGIL 377 >tr|C6HVM6|C6HVM6_9BACT Tax_Id=412449 SubName: Full=Putative hydrogenase-4 subunit (HyfF);[Leptospirillum ferrodiazotrophum] Length = 491 Score = 163 bits (413), Expect = 4e-38 Identities = 96/315 (30%), Positives = 141/315 (44%) Query: 54 PHLVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPA 113 P + L L D S + L++ G V ++ S+ Y+ E HG RLY AL Sbjct: 53 PLVALDENLFADTFSSLFLVITGGVAATTSFFSLRYMTIEASHGRLTPERTRLYLALYQI 112 Query: 114 FLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFL 173 F+ M + +++NN+GL+W LVG RT A++A+WKY ++C VGIA A Sbjct: 113 FVLTMIVVLASNNLGLLWVALEGATLATVLLVGWTRTPAAIKASWKYFILCGVGIAQALF 172 Query: 174 GTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGW 233 GT+LLYF L L L + L P V KVGL P H W Sbjct: 173 GTILLYFASEKTLGPGGTALLLTHLETVKSQLEPTVMSLAFVFFMVGYGTKVGLVPLHNW 232 Query: 234 LADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAA 293 L DAH++ P P+SA++SG+LL+VA ++R++ + D A+ +A+ Sbjct: 233 LPDAHAEGPTPISAVLSGLLLNVALYAILRVKSLADGAIHSSMPSNLLMGFGLASVLLAS 292 Query: 294 FLLTVVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQL 353 + D+KR+ AYSS+E+MG K+ +F A G + Sbjct: 293 ISMWKRQDIKRLFAYSSIEHMGLATLAFGIGGPLATFAGLLHMTTHSLVKSAIFFAVGHI 352 Query: 354 QSAHDSASIADITAV 368 S I I V Sbjct: 353 VQTSGSQKIPSIREV 367 >tr|C6QS81|C6QS81_9BACI Tax_Id=581103 SubName: Full=NADH dehydrogenase (Quinone); EC=1.6.99.5;[Geobacillus sp. Y4.1MC1] Length = 495 Score = 163 bits (412), Expect = 5e-38 Identities = 91/263 (34%), Positives = 131/263 (49%) Query: 53 QPHLVLGGLLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMP 112 Q L G+L D L+ I++++IG +G L + SIGY+ EL HG + + Y Sbjct: 58 QSLFALDGMLFADELTAILILLIGVIGFLNGFYSIGYMRHELTHGEENEKGVCFYYGFYH 117 Query: 113 AFLAAMAIAVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAF 172 FL M I+ +NNI ++W FLVG + +T+ E WKYV+ICSVG+A A Sbjct: 118 IFLFTMVISAISNNIAIMWVAVEATTLGSAFLVGFYKHKTSAEGAWKYVLICSVGLAFAL 177 Query: 173 LGTVLLYFXXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHG 232 GT+L Y + L L+P + + K GL P H Sbjct: 178 YGTILTYSNAFSSVQDAHRAMLWTELVRMGQDLDPQLMKLAFVFVLIGFGTKAGLFPMHT 237 Query: 233 WLADAHSQAPAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIA 292 WL DAHS+AP+P SAL+SGVLL A ++R + VG + + +A Sbjct: 238 WLPDAHSEAPSPASALLSGVLLKCALFAIVRYYAIALQVVGKEFPNSLLLIFGLLTVGVA 297 Query: 293 AFLLTVVTDLKRMLAYSSMENMG 315 AF + + D+KR LAYSS+E++G Sbjct: 298 AFFILMQNDIKRKLAYSSVEHVG 320 >tr|B7LKF5|B7LKF5_ESCF3 Tax_Id=585054 (hyfF)SubName: Full=Hydrogenase 4, membrane subunit;[Escherichia fergusonii] Length = 526 Score = 162 bits (410), Expect = 9e-38 Identities = 99/308 (32%), Positives = 146/308 (47%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D+LS + L ++G +G L SIGY+ E++HG + Y FL M + Sbjct: 70 LHLDSLSGLFLGLLGVIGFLTGIYSIGYMGHEVDHGEISQNTLCDYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + A L+P + K+GL P H WL DAHS+A Sbjct: 190 AASIMPDPELAIFWTAVLQQAPLLDPMLMLLAFVFVLIGFGTKIGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I ++G + +AAF + V D Sbjct: 250 PSPVSALLSAVLLNCALLVLIRYYVIICQSIGNDFPNKLLLIFGMLSVAVAAFFILVQRD 309 Query: 302 LKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAHDSAS 361 +KR+LAYSS+ENMG KT+LF G + + + Sbjct: 310 MKRLLAYSSVENMGLVAVALGIGGPLGILAALLHTLNHSLAKTLLFCGSGNVLLKYGTRD 369 Query: 362 IADITAVL 369 + I +L Sbjct: 370 LNVIRGML 377 >tr|B7NQM4|B7NQM4_ECO7I Tax_Id=585057 (hyfF)SubName: Full=Hydrogenase 4, membrane subunit;[Escherichia coli O7:K1] Length = 526 Score = 161 bits (408), Expect = 2e-37 Identities = 92/254 (36%), Positives = 131/254 (51%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D L + L ++G +G L SIGY+ E+EHG Y FL M + Sbjct: 70 LHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLIVMWAAIKATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + ++ L+P + K GL P H WL+DAHS+A Sbjct: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLSDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I A+G + +AAF + V D Sbjct: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 Query: 302 LKRMLAYSSMENMG 315 +KR+LAYSS+ENMG Sbjct: 310 IKRLLAYSSVENMG 323 >tr|B6IT63|B6IT63_RHOCS Tax_Id=414684 (hyfF)SubName: Full=Hydrogenase-4 component F; EC=1.-.-.-;[Rhodospirillum centenum] Length = 481 Score = 161 bits (408), Expect = 2e-37 Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 6/308 (1%) Query: 61 LLRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAI 120 LL VD +V ++++ VG + S GYI ELE G R Y A+ AF+ M + Sbjct: 59 LLLVDDFNVYLVLLTAFVGFTTSLFSAGYIRHELEDGRLSPLHLRFYHAMYQAFMFTMLL 118 Query: 121 AVSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYF 180 A+ ANN+G++W +V RT A+EA WKY ++C VGIA+A GT+LL+ Sbjct: 119 ALLANNLGVLWVAVEGATLTTVLMVSLYRTHAAIEAAWKYFILCGVGIALALFGTILLFM 178 Query: 181 XXXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQ 240 ++ L AA ++P + KVGL P H WL DAH++ Sbjct: 179 AAQPVLGEGDAAMSWSALLPAAARIDPDLLDLAFVFLLIGYGTKVGLVPLHAWLPDAHAE 238 Query: 241 APAPVSALMSGVLLSVAFSVLIRLRPVIDA---AVGPGYLRAXXXXXXXXXXXIAAFLLT 297 P P+SA++SG+LL+VA ++R + ++ A A+ PG L +AA +L Sbjct: 239 GPTPISAVLSGLLLNVALYAVLRFKMLLAANGEALAPGQL---MIVMGLGTLLLAALMLY 295 Query: 298 VVTDLKRMLAYSSMENMGXXXXXXXXXXXXXXXXXXXXXXXXXXXKTVLFLAGGQLQSAH 357 D+KR AYSS+E+MG K+ +F A G + A Sbjct: 296 RRRDIKRFFAYSSIEHMGIITFAFGMGGPIANFAGLLHMTLHSLTKSAIFFAVGHVTQAT 355 Query: 358 DSASIADI 365 + +ADI Sbjct: 356 GTQKLADI 363 >tr|Q8XBC1|Q8XBC1_ECO57 Tax_Id=83334 (hyfF)SubName: Full=Hydrogenase 4 membrane subunit;[Escherichia coli O157:H7] Length = 526 Score = 160 bits (406), Expect = 3e-37 Identities = 92/254 (36%), Positives = 130/254 (51%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D L + L ++G +G L SIGY+ E+EHG Y FL M + Sbjct: 70 LHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + ++ L+P + K GL P H WL DAHS+A Sbjct: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I A+G + +AAF + V D Sbjct: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 Query: 302 LKRMLAYSSMENMG 315 +KR+LAYSS+ENMG Sbjct: 310 IKRLLAYSSVENMG 323 >tr|B5Z023|B5Z023_ECO5E Tax_Id=444450 SubName: Full=Hydrogenase-4, F subunit;[Escherichia coli O157:H7] Length = 521 Score = 160 bits (406), Expect = 3e-37 Identities = 92/254 (36%), Positives = 130/254 (51%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D L + L ++G +G L SIGY+ E+EHG Y FL M + Sbjct: 65 LHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTMLLV 124 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 125 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 184 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + ++ L+P + K GL P H WL DAHS+A Sbjct: 185 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDAHSEA 244 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I A+G + +AAF + V D Sbjct: 245 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 304 Query: 302 LKRMLAYSSMENMG 315 +KR+LAYSS+ENMG Sbjct: 305 IKRLLAYSSVENMG 318 >tr|B1LND6|B1LND6_ECOSM Tax_Id=439855 SubName: Full=Hydrogenase-4, F subunit;[Escherichia coli] Length = 526 Score = 160 bits (406), Expect = 3e-37 Identities = 92/254 (36%), Positives = 130/254 (51%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D L + L ++G +G L SIGY+ E+EHG Y FL M + Sbjct: 70 LHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTMLLV 129 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 130 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 189 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + ++ L+P + K GL P H WL DAHS+A Sbjct: 190 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDAHSEA 249 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I A+G + +AAF + V D Sbjct: 250 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 309 Query: 302 LKRMLAYSSMENMG 315 +KR+LAYSS+ENMG Sbjct: 310 IKRLLAYSSVENMG 323 >tr|B2NNN2|B2NNN2_ECO57 Tax_Id=444451 SubName: Full=Hydrogenase-4, F subunit;[Escherichia coli O157:H7 str. EC4196] Length = 521 Score = 160 bits (406), Expect = 3e-37 Identities = 92/254 (36%), Positives = 130/254 (51%) Query: 62 LRVDALSVIMLIVIGAVGTLATWASIGYIDAELEHGHTDRRDARLYGALMPAFLAAMAIA 121 L +D L + L ++G +G L SIGY+ E+EHG Y FL M + Sbjct: 65 LHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTMLLV 124 Query: 122 VSANNIGLIWXXXXXXXXXXXFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFX 181 V++NN+ ++W FLVG R++LEA WKY++IC+VG+A GTVL+Y Sbjct: 125 VTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYAN 184 Query: 182 XXXXXXXXXXXLNLDVLTACAAHLNPAVTRXXXXXXXXXXXXKVGLAPFHGWLADAHSQA 241 + + ++ L+P + K GL P H WL DAHS+A Sbjct: 185 AASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDAHSEA 244 Query: 242 PAPVSALMSGVLLSVAFSVLIRLRPVIDAAVGPGYLRAXXXXXXXXXXXIAAFLLTVVTD 301 P+PVSAL+S VLL+ A VLIR +I A+G + +AAF + V D Sbjct: 245 PSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRD 304 Query: 302 LKRMLAYSSMENMG 315 +KR+LAYSS+ENMG Sbjct: 305 IKRLLAYSSVENMG 318 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.325 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,170,807,377 Number of extensions: 62311831 Number of successful extensions: 237206 Number of sequences better than 10.0: 15089 Number of HSP's gapped: 233112 Number of HSP's successfully gapped: 15206 Length of query: 488 Length of database: 3,846,993,858 Length adjustment: 142 Effective length of query: 346 Effective length of database: 2,245,915,032 Effective search space: 777086601072 Effective search space used: 777086601072 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 82 (36.2 bits)