BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1728 (220 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HII3|B2HII3_MYCMM Tax_Id=216594 (hupB)SubName: Full=DNA-bin... 192 3e-47 tr|A0PPZ8|A0PPZ8_MYCUA Tax_Id=362242 (hupB)SubName: Full=DNA-bin... 192 3e-47 tr|Q1RN41|Q1RN41_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN40|Q1RN40_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN39|Q1RN39_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN38|Q1RN38_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN37|Q1RN37_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN36|Q1RN36_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN35|Q1RN35_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 tr|Q1RN34|Q1RN34_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-b... 192 3e-47 sp|P95109|DBH_MYCTU Tax_Id=1773 (hup)RecName: Full=DNA-binding p... 189 2e-46 sp|Q9XB18|DBH_MYCBO Tax_Id=1765 (hup)RecName: Full=DNA-binding p... 189 2e-46 tr|C6DW63|C6DW63_MYCTK Tax_Id=478434 SubName: Full=Histone-like ... 189 2e-46 tr|C1AGA1|C1AGA1_MYCBT Tax_Id=561275 (hupB)SubName: Full=Putativ... 189 2e-46 tr|A5U6Z7|A5U6Z7_MYCTA Tax_Id=419947 (hupB)SubName: Full=DNA-bin... 189 2e-46 tr|A1KMY0|A1KMY0_MYCBP Tax_Id=410289 (hupB)SubName: Full=Probabl... 189 2e-46 tr|D1KKB0|D1KKB0_MYCBO Tax_Id=33892 (lbp/hlp)SubName: Full=Lamin... 189 2e-46 tr|A5WRN9|A5WRN9_MYCTF Tax_Id=336982 SubName: Full=DNA-binding p... 189 2e-46 tr|A4KKP2|A4KKP2_MYCTU Tax_Id=395095 SubName: Full=DNA-binding p... 189 2e-46 tr|A2VLV7|A2VLV7_MYCTU Tax_Id=348776 SubName: Full=DNA-binding p... 189 2e-46 sp|O33125|DBH_MYCLE Tax_Id=1769 (hup)RecName: Full=DNA-binding p... 185 4e-45 tr|B8ZS10|B8ZS10_MYCLB Tax_Id=561304 SubName: Full=Probable hist... 185 4e-45 tr|A4TE21|A4TE21_MYCGI Tax_Id=350054 SubName: Full=Bacterial nuc... 184 5e-45 tr|A1T702|A1T702_MYCVP Tax_Id=350058 SubName: Full=Bacterial nuc... 184 5e-45 tr|Q73VI9|Q73VI9_MYCPA Tax_Id=1770 (hupB)SubName: Full=HupB;[Myc... 182 2e-44 tr|A0QJB5|A0QJB5_MYCA1 Tax_Id=243243 (hup)SubName: Full=DNA-bind... 182 2e-44 sp|Q9ZHC5|DBH_MYCS2 Tax_Id=246196 (hup)RecName: Full=DNA-binding... 181 5e-44 tr|Q4PLR8|Q4PLR8_MYCSM Tax_Id=1772 (hlp)SubName: Full=Histone-li... 181 5e-44 tr|B1MDP9|B1MDP9_MYCA9 Tax_Id=561007 SubName: Full=DNA-binding p... 177 7e-43 tr|Q1BAQ2|Q1BAQ2_MYCSS Tax_Id=164756 SubName: Full=Bacterial nuc... 174 5e-42 tr|A3PXR4|A3PXR4_MYCSJ Tax_Id=164757 SubName: Full=Bacterial nuc... 174 5e-42 tr|A1UEB0|A1UEB0_MYCSK Tax_Id=189918 SubName: Full=Bacterial nuc... 174 5e-42 tr|C0ZXN3|C0ZXN3_RHOE4 Tax_Id=234621 (hup)SubName: Full=Putative... 171 5e-41 tr|C3JSK6|C3JSK6_RHOER Tax_Id=596309 SubName: Full=DNA-binding p... 171 5e-41 tr|Q0S2G2|Q0S2G2_RHOSR Tax_Id=101510 SubName: Full=DNA-binding p... 170 9e-41 tr|C1B2N2|C1B2N2_RHOOB Tax_Id=632772 (hup)SubName: Full=Putative... 170 9e-41 tr|Q5YRY2|Q5YRY2_NOCFA Tax_Id=37329 SubName: Full=Putative histo... 166 2e-39 tr|C2AUC6|C2AUC6_TSUPA Tax_Id=521096 SubName: Full=Bacterial nuc... 159 2e-37 tr|D0LC31|D0LC31_GORB4 Tax_Id=526226 SubName: Full=Histone famil... 149 3e-34 tr|C6WG47|C6WG47_ACTMD Tax_Id=446462 SubName: Full=Histone famil... 117 9e-25 tr|A4FMP0|A4FMP0_SACEN Tax_Id=405948 SubName: Full=Histone-like ... 112 3e-23 tr|C8XEM1|C8XEM1_NAKMY Tax_Id=479431 SubName: Full=Histone famil... 103 1e-20 sp|P0A3H8|DBH2_STRLI Tax_Id=1916 (hup2)RecName: Full=DNA-binding... 101 7e-20 sp|P0A3H7|DBH2_STRCO Tax_Id=1902 (hup2)RecName: Full=DNA-binding... 101 7e-20 tr|B1VZ00|B1VZ00_STRGG Tax_Id=455632 SubName: Full=Putative hist... 101 7e-20 tr|B5H061|B5H061_STRCL Tax_Id=443255 SubName: Full=DNA-binding p... 101 7e-20 tr|A0LVA1|A0LVA1_ACIC1 Tax_Id=351607 SubName: Full=Histone famil... 100 9e-20 tr|B5HM46|B5HM46_9ACTO Tax_Id=463191 SubName: Full=Histone-like ... 99 3e-19 tr|C9Z553|C9Z553_STRSW Tax_Id=680198 SubName: Full=Putative hist... 99 3e-19 tr|B5HGH5|B5HGH5_STRPR Tax_Id=457429 SubName: Full=DNA-binding p... 99 4e-19 >tr|B2HII3|B2HII3_MYCMM Tax_Id=216594 (hupB)SubName: Full=DNA-binding protein Hu, HupB;[Mycobacterium marinum] Length = 220 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|A0PPZ8|A0PPZ8_MYCUA Tax_Id=362242 (hupB)SubName: Full=DNA-binding protein Hu HupB-like protein;[Mycobacterium ulcerans] Length = 229 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN41|Q1RN41_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 229 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN40|Q1RN40_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 229 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN39|Q1RN39_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 229 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN38|Q1RN38_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 220 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN37|Q1RN37_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 220 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN36|Q1RN36_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 220 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN35|Q1RN35_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 211 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >tr|Q1RN34|Q1RN34_MYCUL Tax_Id=1809 (HupB)SubName: Full=Laminin-binding protein;[Mycobacterium ulcerans] Length = 211 Score = 192 bits (487), Expect = 3e-47 Identities = 100/109 (91%), Positives = 100/109 (91%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 >sp|P95109|DBH_MYCTU Tax_Id=1773 (hup)RecName: Full=DNA-binding protein HU homolog; AltName: Full=Histone-like protein; Short=Hlp; AltName: Full=21 kDa laminin-2-binding protein;[Mycobacterium tuberculosis] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >sp|Q9XB18|DBH_MYCBO Tax_Id=1765 (hup)RecName: Full=DNA-binding protein HU homolog; AltName: Full=Histone-like protein; Short=Hlp;[Mycobacterium bovis] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|C6DW63|C6DW63_MYCTK Tax_Id=478434 SubName: Full=Histone-like DNA-binding protein hupB;[Mycobacterium tuberculosis] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|C1AGA1|C1AGA1_MYCBT Tax_Id=561275 (hupB)SubName: Full=Putative DNA-binding protein HU homolog;[Mycobacterium bovis] Length = 205 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|A5U6Z7|A5U6Z7_MYCTA Tax_Id=419947 (hupB)SubName: Full=DNA-binding protein hupB;[Mycobacterium tuberculosis] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|A1KMY0|A1KMY0_MYCBP Tax_Id=410289 (hupB)SubName: Full=Probable DNA-binding protein HU homolog hupB;[Mycobacterium bovis] Length = 205 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|D1KKB0|D1KKB0_MYCBO Tax_Id=33892 (lbp/hlp)SubName: Full=Laminin-binding histone-like protein;[Mycobacterium bovis BCG] Length = 205 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|A5WRN9|A5WRN9_MYCTF Tax_Id=336982 SubName: Full=DNA-binding protein hupB (Histone-like protein);[Mycobacterium tuberculosis] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|A4KKP2|A4KKP2_MYCTU Tax_Id=395095 SubName: Full=DNA-binding protein hupB (Histone-like protein);[Mycobacterium tuberculosis str. Haarlem] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >tr|A2VLV7|A2VLV7_MYCTU Tax_Id=348776 SubName: Full=DNA-binding protein hupB (Histone-like protein);[Mycobacterium tuberculosis C] Length = 214 Score = 189 bits (479), Expect = 2e-46 Identities = 99/109 (90%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGV AS Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGAS 109 >sp|O33125|DBH_MYCLE Tax_Id=1769 (hup)RecName: Full=DNA-binding protein HU homolog; AltName: Full=Histone-like protein; Short=Hlp; AltName: Full=21 kDa laminin-2-binding protein;[Mycobacterium leprae] Length = 200 Score = 185 bits (469), Expect = 4e-45 Identities = 96/109 (88%), Positives = 97/109 (88%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVV+GAQRLP EGPAVKRGV S Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVAGAQRLPLEGPAVKRGVATS 109 >tr|B8ZS10|B8ZS10_MYCLB Tax_Id=561304 SubName: Full=Probable histone-like protein;[Mycobacterium leprae] Length = 200 Score = 185 bits (469), Expect = 4e-45 Identities = 96/109 (88%), Positives = 97/109 (88%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVV+GAQRLP EGPAVKRGV S Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVAGAQRLPLEGPAVKRGVATS 109 >tr|A4TE21|A4TE21_MYCGI Tax_Id=350054 SubName: Full=Bacterial nucleoid protein Hbs;[Mycobacterium gilvum] Length = 217 Score = 184 bits (468), Expect = 5e-45 Identities = 95/109 (87%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLGSDRRQATAAVENVVDTIVRAVHKG+SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGSDRRQATAAVENVVDTIVRAVHKGESVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQ+LPAEGPAVKRGV A+ Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPAEGPAVKRGVAAA 109 >tr|A1T702|A1T702_MYCVP Tax_Id=350058 SubName: Full=Bacterial nucleoid protein Hbs;[Mycobacterium vanbaalenii] Length = 212 Score = 184 bits (468), Expect = 5e-45 Identities = 95/109 (87%), Positives = 99/109 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLGSDRRQATAAVENVVDTIVRAVHKG+SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGSDRRQATAAVENVVDTIVRAVHKGESVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQ+LPAEGPAVKRGV A+ Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQKLPAEGPAVKRGVTAT 109 >tr|Q73VI9|Q73VI9_MYCPA Tax_Id=1770 (hupB)SubName: Full=HupB;[Mycobacterium paratuberculosis] Length = 212 Score = 182 bits (463), Expect = 2e-44 Identities = 94/107 (87%), Positives = 97/107 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKL +DRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVM 107 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLP+EGPAVKRGV+ Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVV 107 >tr|A0QJB5|A0QJB5_MYCA1 Tax_Id=243243 (hup)SubName: Full=DNA-binding protein HU;[Mycobacterium avium] Length = 217 Score = 182 bits (463), Expect = 2e-44 Identities = 94/107 (87%), Positives = 97/107 (90%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKL +DRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 6 MNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 65 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVM 107 NPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLP+EGPAVKRGV+ Sbjct: 66 RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVV 112 >sp|Q9ZHC5|DBH_MYCS2 Tax_Id=246196 (hup)RecName: Full=DNA-binding protein HU homolog; AltName: Full=Histone-like protein; Short=Hlp;[Mycobacterium smegmatis] Length = 208 Score = 181 bits (459), Expect = 5e-44 Identities = 92/108 (85%), Positives = 97/108 (89%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT K+G+DRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTTKMGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV+SGAQ+LPA+GPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAQKLPADGPAVKRGVTA 108 >tr|Q4PLR8|Q4PLR8_MYCSM Tax_Id=1772 (hlp)SubName: Full=Histone-like protein;[Mycobacterium smegmatis] Length = 208 Score = 181 bits (459), Expect = 5e-44 Identities = 92/108 (85%), Positives = 97/108 (89%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT K+G+DRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTTKMGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV+SGAQ+LPA+GPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAQKLPADGPAVKRGVTA 108 >tr|B1MDP9|B1MDP9_MYCA9 Tax_Id=561007 SubName: Full=DNA-binding protein HU homolog (Histone-like);[Mycobacterium abscessus] Length = 207 Score = 177 bits (449), Expect = 7e-43 Identities = 91/109 (83%), Positives = 96/109 (88%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLTQKLGSDRRQATAAVE+VVDTIVR VHKG+SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTQKLGSDRRQATAAVEHVVDTIVRTVHKGESVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGETVKVKPTSVP FRPGAQFKAVVSGAQ+LPA+GPAVKRG A+ Sbjct: 61 RNPRTGETVKVKPTSVPTFRPGAQFKAVVSGAQKLPADGPAVKRGSTAA 109 >tr|Q1BAQ2|Q1BAQ2_MYCSS Tax_Id=164756 SubName: Full=Bacterial nucleoid protein Hbs;[Mycobacterium sp.] Length = 225 Score = 174 bits (442), Expect = 5e-42 Identities = 89/108 (82%), Positives = 94/108 (87%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELID LT K+G+DRRQAT AVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDALTTKMGTDRRQATEAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKA+VSGAQ+L +EGPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAIVSGAQKLASEGPAVKRGVAA 108 >tr|A3PXR4|A3PXR4_MYCSJ Tax_Id=164757 SubName: Full=Bacterial nucleoid protein Hbs;[Mycobacterium sp.] Length = 225 Score = 174 bits (442), Expect = 5e-42 Identities = 89/108 (82%), Positives = 94/108 (87%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELID LT K+G+DRRQAT AVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDALTTKMGTDRRQATEAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKA+VSGAQ+L +EGPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAIVSGAQKLASEGPAVKRGVAA 108 >tr|A1UEB0|A1UEB0_MYCSK Tax_Id=189918 SubName: Full=Bacterial nucleoid protein Hbs;[Mycobacterium sp.] Length = 225 Score = 174 bits (442), Expect = 5e-42 Identities = 89/108 (82%), Positives = 94/108 (87%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELID LT K+G+DRRQAT AVENVVDTIVRAVHKGDSVTITGFGVFEQ Sbjct: 1 MNKAELIDALTTKMGTDRRQATEAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKA+VSGAQ+L +EGPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAIVSGAQKLASEGPAVKRGVAA 108 >tr|C0ZXN3|C0ZXN3_RHOE4 Tax_Id=234621 (hup)SubName: Full=Putative DNA-binding protein HU;[Rhodococcus erythropolis] Length = 228 Score = 171 bits (433), Expect = 5e-41 Identities = 87/108 (80%), Positives = 94/108 (87%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLGSDRR AT AVE+VVDTIVRAVH+G+SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGSDRRTATDAVEHVVDTIVRAVHRGESVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV++G Q+LPA GPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGVAA 108 >tr|C3JSK6|C3JSK6_RHOER Tax_Id=596309 SubName: Full=DNA-binding protein; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 183 Score = 171 bits (433), Expect = 5e-41 Identities = 87/108 (80%), Positives = 94/108 (87%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLGSDRR AT AVE+VVDTIVRAVH+G+SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGSDRRTATDAVEHVVDTIVRAVHRGESVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV++G Q+LPA GPAVKRGV A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGVAA 108 >tr|Q0S2G2|Q0S2G2_RHOSR Tax_Id=101510 SubName: Full=DNA-binding protein;[Rhodococcus sp.] Length = 230 Score = 170 bits (431), Expect = 9e-41 Identities = 86/108 (79%), Positives = 93/108 (86%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLG+DRR AT AVE+VVDTIVRAVH+GDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGTDRRTATEAVEHVVDTIVRAVHRGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV++G Q+LPA GPAVKRG A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGAAA 108 >tr|C1B2N2|C1B2N2_RHOOB Tax_Id=632772 (hup)SubName: Full=Putative DNA-binding protein HU;[Rhodococcus opacus] Length = 231 Score = 170 bits (431), Expect = 9e-41 Identities = 86/108 (79%), Positives = 93/108 (86%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLG+DRR AT AVE+VVDTIVRAVH+GDSVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGTDRRTATEAVEHVVDTIVRAVHRGDSVTITGFGVFEQRRRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVKPTSVPAFRPGAQFKAV++G Q+LPA GPAVKRG A Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGAAA 108 >tr|Q5YRY2|Q5YRY2_NOCFA Tax_Id=37329 SubName: Full=Putative histone-like DNA-binding protein;[Nocardia farcinica] Length = 232 Score = 166 bits (419), Expect = 2e-39 Identities = 86/108 (79%), Positives = 92/108 (85%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELIDVLT+KLG+DRR ATAAVE+VVDTIVRAVHKG SVTITGFGVFEQ Sbjct: 1 MNKAELIDVLTEKLGTDRRTATAAVEHVVDTIVRAVHKGQSVTITGFGVFEQRKRAPRVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMA 108 NPRTGETVKVK TSVPAFRPGAQFKAV++G Q+L A GPAVKRGV A Sbjct: 61 RNPRTGETVKVKATSVPAFRPGAQFKAVIAGKQKLAATGPAVKRGVNA 108 >tr|C2AUC6|C2AUC6_TSUPA Tax_Id=521096 SubName: Full=Bacterial nucleoid protein Hbs;[Tsukamurella paurometabola DSM 20162] Length = 235 Score = 159 bits (402), Expect = 2e-37 Identities = 81/104 (77%), Positives = 88/104 (84%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELI+ LT+KLG+DRR A AAVE +VDTIVRAVH GDSVTITGFGVFEQ Sbjct: 1 MNKAELIEELTEKLGTDRRTAGAAVEAIVDTIVRAVHAGDSVTITGFGVFEQRKRAARVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKR 104 NPRTGETVKVKPTSVPAFRPGAQFKAV+SGA +LPA GPAV+R Sbjct: 61 RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAAKLPASGPAVRR 104 >tr|D0LC31|D0LC31_GORB4 Tax_Id=526226 SubName: Full=Histone family protein DNA-binding protein;[Gordonia bronchialis] Length = 193 Score = 149 bits (375), Expect = 3e-34 Identities = 77/105 (73%), Positives = 87/105 (82%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELID LT+KL +DR+ AT AVE +VDTIVRAV+KG+SVTITGFGVFE+ Sbjct: 1 MNKAELIDELTKKLDADRKTATEAVELIVDTIVRAVNKGESVTITGFGVFEKRRRAPRVA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRG 105 NPRTGETVKV+ TSVPAFRPGAQFKAVV+G Q+L A GPAVKRG Sbjct: 61 RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLAATGPAVKRG 105 >tr|C6WG47|C6WG47_ACTMD Tax_Id=446462 SubName: Full=Histone family protein DNA-binding protein;[Actinosynnema mirum] Length = 285 Score = 117 bits (293), Expect = 9e-25 Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 1/96 (1%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+LI+ L ++LG D++ A AAV+ +VD IVR+VHKG+ V ITGFGVFE+ Sbjct: 1 MNKAQLIEALAERLG-DKKNAAAAVDGIVDVIVRSVHKGEKVNITGFGVFEKRARAARTA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLP 96 NPRTGETVKVK T+VPAFR G+ FK V+SGA++LP Sbjct: 60 RNPRTGETVKVKKTNVPAFRAGSTFKDVISGAKKLP 95 >tr|A4FMP0|A4FMP0_SACEN Tax_Id=405948 SubName: Full=Histone-like DNA binding protein;[Saccharopolyspora erythraea] Length = 215 Score = 112 bits (280), Expect = 3e-23 Identities = 61/109 (55%), Positives = 76/109 (69%), Gaps = 2/109 (1%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+LI+ L ++LG D++ A+ AVE+VVD IVR V+KG+ V ITGFGVFE+ Sbjct: 1 MNKAQLIEALAERLG-DKKTASKAVEDVVDIIVRQVNKGEKVNITGFGVFEKRARAARTA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NPRTGE VKVK T+VPAFR G QFK V+ G ++LP A K G AS Sbjct: 60 RNPRTGEAVKVKKTNVPAFRAGTQFKEVIGGTRKLPRLSSA-KSGTRAS 107 >tr|C8XEM1|C8XEM1_NAKMY Tax_Id=479431 SubName: Full=Histone family protein DNA-binding protein;[Nakamurella multipartita] Length = 222 Score = 103 bits (258), Expect = 1e-20 Identities = 51/96 (53%), Positives = 67/96 (69%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNK +LI+ L ++L D+++A AVE V+D I R V KG SV+I+GFGVFE+ Sbjct: 1 MNKTDLINQLAERLDGDKKKAQVAVEGVIDLIQREVQKGRSVSISGFGVFEKRARAARTA 60 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLP 96 NPRTGE VKV+ T+VPAFRPG FK V++G +LP Sbjct: 61 RNPRTGEAVKVRKTNVPAFRPGKYFKDVIAGTVKLP 96 >sp|P0A3H8|DBH2_STRLI Tax_Id=1916 (hup2)RecName: Full=DNA-binding protein HU 2;[Streptomyces lividans] Length = 218 Score = 101 bits (251), Expect = 7e-20 Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + KLG R+QA AV+ V+D +VRAV GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKLGG-RQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG+++LP AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGS 108 >sp|P0A3H7|DBH2_STRCO Tax_Id=1902 (hup2)RecName: Full=DNA-binding protein HU 2;[Streptomyces coelicolor] Length = 218 Score = 101 bits (251), Expect = 7e-20 Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + KLG R+QA AV+ V+D +VRAV GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKLGG-RQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG+++LP AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGS 108 >tr|B1VZ00|B1VZ00_STRGG Tax_Id=455632 SubName: Full=Putative histone-like DNA-binding protein;[Streptomyces griseus subsp. griseus] Length = 224 Score = 101 bits (251), Expect = 7e-20 Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + K+G R+QA AV+ V+D IVRAV GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKVGG-RQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG+++LP AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGS 108 >tr|B5H061|B5H061_STRCL Tax_Id=443255 SubName: Full=DNA-binding protein HU;[Streptomyces clavuligerus ATCC 27064] Length = 222 Score = 101 bits (251), Expect = 7e-20 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 1/99 (1%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + KLG R+QA AV++V+D IVRAV GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKLGG-RQQAADAVDSVLDAIVRAVVAGDRVSVTGFGSFEKVERPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEG 99 NP+TGE V+VK TSVP FR G FK +VSGA++LP G Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGAKKLPRGG 98 >tr|A0LVA1|A0LVA1_ACIC1 Tax_Id=351607 SubName: Full=Histone family protein DNA-binding protein;[Acidothermus cellulolyticus] Length = 163 Score = 100 bits (250), Expect = 9e-20 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 3/105 (2%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKAELI + ++G D++ A+ AVE V+DTI R V +G+ V ITGFG+FE+ Sbjct: 1 MNKAELITAVAARIG-DKKTASEAVEAVIDTITRTVARGEKVAITGFGIFEKVERAARMA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPA--EGPAVK 103 NP TGE V+VK TSVP FR G + K VVSGA +LPA PA K Sbjct: 60 RNPATGERVRVKKTSVPKFRAGTRLKGVVSGAIKLPAVKAAPAAK 104 >tr|B5HM46|B5HM46_9ACTO Tax_Id=463191 SubName: Full=Histone-like DNA-binding protein;[Streptomyces sviceus ATCC 29083] Length = 215 Score = 99.4 bits (246), Expect = 3e-19 Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + K+G R+QA AV+ V+D IVRA GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKVGG-RQQAADAVDAVLDAIVRATVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG ++LP AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPKNDVAVKKAPKGS 108 >tr|C9Z553|C9Z553_STRSW Tax_Id=680198 SubName: Full=Putative histone-like DNA binding protein;[Streptomyces scabies] Length = 217 Score = 99.0 bits (245), Expect = 3e-19 Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + K+G R+QA AV+ V+D IVRAV GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKVGG-RQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGP-AVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG+++LP G AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGS 109 >tr|B5HGH5|B5HGH5_STRPR Tax_Id=457429 SubName: Full=DNA-binding protein HU 2;[Streptomyces pristinaespiralis ATCC 25486] Length = 216 Score = 98.6 bits (244), Expect = 4e-19 Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Query: 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQXXXXXXXX 60 MNKA+L++ + KLG R+QA AV+ V+D IVRA GD V++TGFG FE+ Sbjct: 1 MNKAQLVEAIADKLGG-RQQAADAVDAVLDAIVRATVAGDRVSVTGFGSFEKVDRPARYA 59 Query: 61 XNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGP-AVKRGVMAS 109 NP+TGE V+VK TSVP FR G FK +VSG+++LP G AVK+ S Sbjct: 60 RNPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVAVKKAPKGS 109 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.315 0.130 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 682,816,208 Number of extensions: 20120314 Number of successful extensions: 52372 Number of sequences better than 10.0: 4339 Number of HSP's gapped: 52448 Number of HSP's successfully gapped: 4340 Length of query: 220 Length of database: 3,846,993,858 Length adjustment: 132 Effective length of query: 88 Effective length of database: 2,358,667,062 Effective search space: 207562701456 Effective search space used: 207562701456 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 78 (34.7 bits)