BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_1733 (373 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HII8|B2HII8_MYCMM Tax_Id=216594 (ddlA)SubName: Full=D-alani... 707 0.0 sp|A0PQ03|DDL_MYCUA Tax_Id=362242 (ddl)RecName: Full=D-alanine--... 704 0.0 sp|A1KMX5|DDL_MYCBP Tax_Id=410289 (ddl)RecName: Full=D-alanine--... 608 e-172 tr|C1AG96|C1AG96_MYCBT Tax_Id=561275 (ddl)SubName: Full=D-alanyl... 608 e-172 tr|A5WRN4|A5WRN4_MYCTF Tax_Id=336982 SubName: Full=D-alanine-D-a... 608 e-172 tr|A2VLV3|A2VLV3_MYCTU Tax_Id=348776 SubName: Full=D-alanine-D-a... 608 e-172 sp|P95114|DDL_MYCTU Tax_Id=1773 (ddl)RecName: Full=D-alanine--D-... 607 e-171 sp|A5U6Z2|DDL_MYCTA Tax_Id=419947 (ddl)RecName: Full=D-alanine--... 607 e-171 sp|Q7TXH9|DDL_MYCBO Tax_Id=1765 (ddl)RecName: Full=D-alanine--D-... 603 e-170 sp|Q73VJ4|DDL_MYCPA Tax_Id=1770 (ddl)RecName: Full=D-alanine--D-... 594 e-168 sp|A0QJB2|DDL_MYCA1 Tax_Id=243243 (ddl)RecName: Full=D-alanine--... 594 e-168 tr|C6DW68|C6DW68_MYCTK Tax_Id=478434 SubName: Full=D-alanine-D-a... 592 e-167 sp|Q1BAP6|DDL_MYCSS Tax_Id=164756 (ddl)RecName: Full=D-alanine--... 580 e-164 sp|A1UEB6|DDL_MYCSK Tax_Id=189918 (ddl)RecName: Full=D-alanine--... 580 e-164 sp|A3PXS0|DDL_MYCSJ Tax_Id=164757 (ddl)RecName: Full=D-alanine--... 580 e-164 sp|Q9ZGN0|DDL_MYCSM Tax_Id=1772 (ddl)RecName: Full=D-alanine--D-... 574 e-162 sp|A0QUZ7|DDL_MYCS2 Tax_Id=246196 (ddl)RecName: Full=D-alanine--... 574 e-162 sp|A1T708|DDL_MYCVP Tax_Id=350058 (ddl)RecName: Full=D-alanine--... 572 e-161 sp|A4TE25|DDL_MYCGI Tax_Id=350054 (ddl)RecName: Full=D-alanine--... 569 e-160 sp|Q9CBS0|DDL_MYCLE Tax_Id=1769 (ddl)RecName: Full=D-alanine--D-... 552 e-155 tr|B8ZS05|B8ZS05_MYCLB Tax_Id=561304 (ddlA)SubName: Full=D-alani... 552 e-155 tr|B1MDP3|B1MDP3_MYCA9 Tax_Id=561007 SubName: Full=Probable D-al... 514 e-144 sp|Q5YRY7|DDL_NOCFA Tax_Id=37329 (ddl)RecName: Full=D-alanine--D... 477 e-132 sp|Q0S2F6|DDL_RHOSR Tax_Id=101510 (ddl)RecName: Full=D-alanine--... 471 e-131 sp|C1B2N8|DDL_RHOOB Tax_Id=632772 (ddl)RecName: Full=D-alanine--... 471 e-131 sp|C0ZXN9|DDL_RHOE4 Tax_Id=234621 (ddl)RecName: Full=D-alanine--... 460 e-127 tr|C3JLR0|C3JLR0_RHOER Tax_Id=596309 SubName: Full=D-alanine--D-... 460 e-127 tr|A4FMM8|A4FMM8_SACEN Tax_Id=405948 (ddl)SubName: Full=D-alanyl... 435 e-120 tr|C7MY26|C7MY26_SACVD Tax_Id=471857 SubName: Full=D-alanine--D-... 411 e-113 tr|C6WG31|C6WG31_ACTMD Tax_Id=446462 SubName: Full=D-alanine/D-a... 396 e-108 tr|A8M645|A8M645_SALAI Tax_Id=391037 SubName: Full=D-alanine--D-... 390 e-106 tr|C8XEZ8|C8XEZ8_NAKMY Tax_Id=479431 SubName: Full=D-alanine/D-a... 389 e-106 tr|A4X4E2|A4X4E2_SALTO Tax_Id=369723 SubName: Full=D-alanine--D-... 387 e-105 tr|C4RC43|C4RC43_9ACTO Tax_Id=219305 SubName: Full=D-alanine-D-a... 384 e-104 tr|C4LJE7|C4LJE7_CORK4 Tax_Id=645127 (ddlA)SubName: Full=D-alani... 384 e-104 tr|C0WG02|C0WG02_9CORY Tax_Id=525260 (ddl)SubName: Full=D-alanyl... 367 1e-99 sp|Q8FPQ9|DDL_COREF Tax_Id=152794 (ddl)RecName: Full=D-alanine--... 365 4e-99 tr|C6R8U0|C6R8U0_9CORY Tax_Id=553206 SubName: Full=D-alanine--D-... 363 2e-98 tr|C2BR27|C2BR27_9CORY Tax_Id=525264 (ddl)SubName: Full=D-alanyl... 363 2e-98 tr|Q0RDM2|Q0RDM2_FRAAA Tax_Id=326424 (ddlA)SubName: Full=D-alani... 361 7e-98 tr|A8L584|A8L584_FRASN Tax_Id=298653 SubName: Full=D-alanine--D-... 360 1e-97 tr|C2AUC1|C2AUC1_TSUPA Tax_Id=521096 SubName: Full=D-alanine--D-... 360 2e-97 tr|C9N9U2|C9N9U2_9ACTO Tax_Id=591167 SubName: Full=D-alanine/D-a... 359 3e-97 tr|C1UIF5|C1UIF5_9ACTO Tax_Id=526225 SubName: Full=D-alanine--D-... 355 4e-96 sp|Q2J6Y1|DDL_FRASC Tax_Id=106370 (ddl)RecName: Full=D-alanine--... 353 2e-95 sp|Q6NHK6|DDL_CORDI Tax_Id=1717 (ddl)RecName: Full=D-alanine--D-... 353 2e-95 sp|Q82JS5|DDL_STRAW Tax_Id=33903 (ddl)RecName: Full=D-alanine--D... 353 3e-95 tr|C7QH14|C7QH14_CATAD Tax_Id=479433 SubName: Full=D-alanine/D-a... 352 3e-95 sp|B1VYZ5|DDL_STRGG Tax_Id=455632 (ddl)RecName: Full=D-alanine--... 352 4e-95 sp|A4QDT4|DDL_CORGB Tax_Id=340322 (ddl)RecName: Full=D-alanine--... 351 1e-94 >tr|B2HII8|B2HII8_MYCMM Tax_Id=216594 (ddlA)SubName: Full=D-alanine--D-alanine ligase DdlA;[Mycobacterium marinum] Length = 373 Score = 707 bits (1824), Expect = 0.0 Identities = 359/373 (96%), Positives = 360/373 (96%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +SGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD Sbjct: 1 MSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP Sbjct: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 REELQRLGLPAYVKPA FDELPAAIAAARRHDPKVIVEAAINGRELEC Sbjct: 181 REELQRLGLPAYVKPARGGSSIGVSRVSSFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ Sbjct: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGLR 373 MVETALSRGIGLR Sbjct: 361 MVETALSRGIGLR 373 >sp|A0PQ03|DDL_MYCUA Tax_Id=362242 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium ulcerans] Length = 373 Score = 704 bits (1818), Expect = 0.0 Identities = 357/373 (95%), Positives = 359/373 (96%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +SGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD Sbjct: 1 MSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP Sbjct: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 REELQRLGLPAYVKPA FDELPAAIAAARRHDPKVIVEAAINGRELEC Sbjct: 181 REELQRLGLPAYVKPARGGSSIGVSRVSSFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ Sbjct: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAFEAIDCQGLARVDFFLTDDGPVINE+NTMPGFTTISMYPRMW ASGVDYPTLLAT Sbjct: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINELNTMPGFTTISMYPRMWVASGVDYPTLLAT 360 Query: 361 MVETALSRGIGLR 373 MVETALSRGIGLR Sbjct: 361 MVETALSRGIGLR 373 >sp|A1KMX5|DDL_MYCBP Tax_Id=410289 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium bovis] Length = 373 Score = 608 bits (1568), Expect = e-172 Identities = 305/372 (81%), Positives = 330/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ETAL+RG+GL Sbjct: 361 MIETALARGVGL 372 >tr|C1AG96|C1AG96_MYCBT Tax_Id=561275 (ddl)SubName: Full=D-alanyl-alanine synthetase A; EC=6.3.2.4;[Mycobacterium bovis] Length = 373 Score = 608 bits (1568), Expect = e-172 Identities = 305/372 (81%), Positives = 330/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ETAL+RG+GL Sbjct: 361 MIETALARGVGL 372 >tr|A5WRN4|A5WRN4_MYCTF Tax_Id=336982 SubName: Full=D-alanine-D-alanine ligase ddlA;[Mycobacterium tuberculosis] Length = 373 Score = 608 bits (1568), Expect = e-172 Identities = 305/372 (81%), Positives = 330/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ETAL+RG+GL Sbjct: 361 MIETALARGVGL 372 >tr|A2VLV3|A2VLV3_MYCTU Tax_Id=348776 SubName: Full=D-alanine-D-alanine ligase ddlA;[Mycobacterium tuberculosis C] Length = 373 Score = 608 bits (1568), Expect = e-172 Identities = 305/372 (81%), Positives = 330/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ETAL+RG+GL Sbjct: 361 MIETALARGVGL 372 >sp|P95114|DDL_MYCTU Tax_Id=1773 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium tuberculosis] Length = 373 Score = 607 bits (1564), Expect = e-171 Identities = 304/372 (81%), Positives = 329/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ET L+RG+GL Sbjct: 361 MIETTLARGVGL 372 >sp|A5U6Z2|DDL_MYCTA Tax_Id=419947 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium tuberculosis] Length = 373 Score = 607 bits (1564), Expect = e-171 Identities = 304/372 (81%), Positives = 329/372 (88%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 +S + RR R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD Sbjct: 1 MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTD 60 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGP 120 NPDAL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGP Sbjct: 61 ANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGP 120 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 YGEDGTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L Sbjct: 121 YGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLH 180 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 R+E +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELEC Sbjct: 181 RQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELEC 240 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLE PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQ Sbjct: 241 GVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQ 300 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 LAIRAF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT Sbjct: 301 LAIRAFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 Query: 361 MVETALSRGIGL 372 M+ET L+RG+GL Sbjct: 361 MIETTLARGVGL 372 >sp|Q7TXH9|DDL_MYCBO Tax_Id=1765 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium bovis] Length = 370 Score = 603 bits (1555), Expect = e-170 Identities = 303/368 (82%), Positives = 326/368 (88%) Query: 5 SRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPD 64 S R+RVAVVFGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD NPD Sbjct: 2 SANDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANPD 61 Query: 65 ALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGED 124 AL IT+R LP+V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGPYGED Sbjct: 62 ALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGED 121 Query: 125 GTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREEL 184 GTIQGLLELAGVPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L R+E Sbjct: 122 GTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQEC 181 Query: 185 QRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLE 244 +RLGLP +VKPA +D+LPAA+A ARRHDPKVIVEAAI+GRELECGVLE Sbjct: 182 ERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLE 241 Query: 245 FPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIR 304 PDG LEASTLGEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQLAIR Sbjct: 242 MPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIR 301 Query: 305 AFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVET 364 AF AIDC+GLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATM+ET Sbjct: 302 AFAAIDCRGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIET 361 Query: 365 ALSRGIGL 372 AL+RG+GL Sbjct: 362 ALARGVGL 369 >sp|Q73VJ4|DDL_MYCPA Tax_Id=1770 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium paratuberculosis] Length = 369 Score = 594 bits (1532), Expect = e-168 Identities = 297/365 (81%), Positives = 329/365 (90%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 +R+RVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEV+AIGITPQGSWVLTDG+P ALAI Sbjct: 5 QRVRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVVAIGITPQGSWVLTDGDPAALAI 64 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 +DR+LPEV+S SGTELALPADP GQLVSLPPGA EVLASVDVVFPVLHGPYGEDGTIQ Sbjct: 65 SDRQLPEVTSASGTELALPADPGRSGQLVSLPPGASEVLASVDVVFPVLHGPYGEDGTIQ 124 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVGAGV ASAAGMDKEFTKKL++A GLPIG +AVLRPS+ +L ++ +RLG Sbjct: 125 GLLELAGVPYVGAGVFASAAGMDKEFTKKLFAAEGLPIGDYAVLRPSQSTLSLQDRERLG 184 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +DEL AA+AAAR HDPKVIVEAAI GRELECGVLE PDG Sbjct: 185 LPVFVKPARGGSSIGVSRVSSWDELDAAVAAARDHDPKVIVEAAIAGRELECGVLEMPDG 244 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 ++AST+GEIRVAGVRGRED FYDF TKYLDD AELDVPAKV+D++ADAVR+LAIRAF+A Sbjct: 245 TVQASTVGEIRVAGVRGREDSFYDFATKYLDDTAELDVPAKVDDEIADAVRELAIRAFKA 304 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGLARVDFFLT+ GPV+NEINTMPGFTTISMYPRMWAASGVDYP+LLATMVETAL+R Sbjct: 305 VDCQGLARVDFFLTETGPVLNEINTMPGFTTISMYPRMWAASGVDYPSLLATMVETALAR 364 Query: 369 GIGLR 373 G+GLR Sbjct: 365 GVGLR 369 >sp|A0QJB2|DDL_MYCA1 Tax_Id=243243 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium avium] Length = 369 Score = 594 bits (1532), Expect = e-168 Identities = 297/365 (81%), Positives = 329/365 (90%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 +R+RVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEV+AIGITPQGSWVLTDG+P ALAI Sbjct: 5 QRVRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVVAIGITPQGSWVLTDGDPAALAI 64 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 +DR+LPEV+S SGTELALPADP GQLVSLPPGA EVLASVDVVFPVLHGPYGEDGTIQ Sbjct: 65 SDRQLPEVTSASGTELALPADPGRSGQLVSLPPGASEVLASVDVVFPVLHGPYGEDGTIQ 124 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVGAGV ASAAGMDKEFTKKL++A GLPIG +AVLRPS+ +L ++ +RLG Sbjct: 125 GLLELAGVPYVGAGVFASAAGMDKEFTKKLFAAEGLPIGDYAVLRPSQSTLSLQDRERLG 184 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +DEL AA+AAAR HDPKVIVEAAI GRELECGVLE PDG Sbjct: 185 LPVFVKPARGGSSIGVSRVSSWDELDAAVAAARDHDPKVIVEAAIAGRELECGVLEMPDG 244 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 ++AST+GEIRVAGVRGRED FYDF TKYLDD AELDVPAKV+D++ADAVR+LAIRAF+A Sbjct: 245 TVQASTVGEIRVAGVRGREDSFYDFATKYLDDTAELDVPAKVDDEIADAVRELAIRAFKA 304 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGLARVDFFLT+ GPV+NEINTMPGFTTISMYPRMWAASGVDYP+LLATMVETAL+R Sbjct: 305 VDCQGLARVDFFLTETGPVLNEINTMPGFTTISMYPRMWAASGVDYPSLLATMVETALTR 364 Query: 369 GIGLR 373 G+GLR Sbjct: 365 GVGLR 369 >tr|C6DW68|C6DW68_MYCTK Tax_Id=478434 SubName: Full=D-alanine-D-alanine ligase ddlA;[Mycobacterium tuberculosis] Length = 358 Score = 592 bits (1527), Expect = e-167 Identities = 296/357 (82%), Positives = 319/357 (89%) Query: 16 VFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAITDRRLPE 75 +FGGRSNEHAISCVSAGSILRNLD RRF+VIA+GITP GSWVLTD NPDAL IT+R LP+ Sbjct: 1 MFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANPDALTITNRELPQ 60 Query: 76 VSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQGLLELAG 135 V S SGTELALPADPR GGQLVSLPPGAGEVL SVDVVFPVLHGPYGEDGTIQGLLELAG Sbjct: 61 VKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAG 120 Query: 136 VPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGLPAYVKP 195 VPYVGAGVLASA GMDKEFTKKL +A GLP+G +AVLRP R +L R+E +RLGLP +VKP Sbjct: 121 VPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECERLGLPVFVKP 180 Query: 196 AXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGRLEASTL 255 A +D+LPAA+A ARRHDPKVIVEAAI+GRELECGVLE PDG LEASTL Sbjct: 181 ARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLEMPDGTLEASTL 240 Query: 256 GEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAIDCQGLA 315 GEIRVAGVRGRED FYDF TKYLDDAAELDVPAKV+D VA+A+RQLAIRAF AIDC+GLA Sbjct: 241 GEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLA 300 Query: 316 RVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRGIGL 372 RVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATM+ETAL+RG+GL Sbjct: 301 RVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETALARGVGL 357 >sp|Q1BAP6|DDL_MYCSS Tax_Id=164756 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium sp.] Length = 371 Score = 580 bits (1496), Expect = e-164 Identities = 292/368 (79%), Positives = 320/368 (86%), Gaps = 1/368 (0%) Query: 7 RGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDAL 66 R +R RVAVV+GGRS+EHAISCVSAGSILRNLDP RF+V+A+GITP GSWVLTDG P+ L Sbjct: 4 RNQRTRVAVVYGGRSSEHAISCVSAGSILRNLDPERFDVVAVGITPDGSWVLTDGRPETL 63 Query: 67 AITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGA-GEVLASVDVVFPVLHGPYGEDG 125 AITD RLPEVS++SGT LALPADP G+LVSL P A GEVLA+VDVVFPVLHGPYGEDG Sbjct: 64 AITDGRLPEVSAESGTALALPADPGRRGELVSLSPAAAGEVLAAVDVVFPVLHGPYGEDG 123 Query: 126 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQ 185 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKL A GLP+G H VLRP R ++ +E + Sbjct: 124 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLLVAEGLPVGDHVVLRPGRANVTLDERE 183 Query: 186 RLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEF 245 RLGLP +VKPA + ELPAAI AARRHDPKVIVEA I GRELECGVLE+ Sbjct: 184 RLGLPVFVKPARGGSSIGVSRVSDWAELPAAIEAARRHDPKVIVEAGIAGRELECGVLEY 243 Query: 246 PDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRA 305 PDGR++AST+GEIRVAGVRGREDGFYDF TKYLDD AELDVPAKVEDDVAD +R+LAIRA Sbjct: 244 PDGRVDASTIGEIRVAGVRGREDGFYDFATKYLDDGAELDVPAKVEDDVADEIRRLAIRA 303 Query: 306 FEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETA 365 F AIDCQGLARVDFFLTDDGPV+NEINTMPGFTTISMYPRMWAASGVDYPTLLA MV+TA Sbjct: 304 FRAIDCQGLARVDFFLTDDGPVVNEINTMPGFTTISMYPRMWAASGVDYPTLLAAMVDTA 363 Query: 366 LSRGIGLR 373 ++RG GLR Sbjct: 364 VARGTGLR 371 >sp|A1UEB6|DDL_MYCSK Tax_Id=189918 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium sp.] Length = 371 Score = 580 bits (1496), Expect = e-164 Identities = 292/368 (79%), Positives = 320/368 (86%), Gaps = 1/368 (0%) Query: 7 RGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDAL 66 R +R RVAVV+GGRS+EHAISCVSAGSILRNLDP RF+V+A+GITP GSWVLTDG P+ L Sbjct: 4 RNQRTRVAVVYGGRSSEHAISCVSAGSILRNLDPERFDVVAVGITPDGSWVLTDGRPETL 63 Query: 67 AITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGA-GEVLASVDVVFPVLHGPYGEDG 125 AITD RLPEVS++SGT LALPADP G+LVSL P A GEVLA+VDVVFPVLHGPYGEDG Sbjct: 64 AITDGRLPEVSAESGTALALPADPGRRGELVSLSPAAAGEVLAAVDVVFPVLHGPYGEDG 123 Query: 126 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQ 185 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKL A GLP+G H VLRP R ++ +E + Sbjct: 124 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLLVAEGLPVGDHVVLRPGRANVTLDERE 183 Query: 186 RLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEF 245 RLGLP +VKPA + ELPAAI AARRHDPKVIVEA I GRELECGVLE+ Sbjct: 184 RLGLPVFVKPARGGSSIGVSRVSDWAELPAAIEAARRHDPKVIVEAGIAGRELECGVLEY 243 Query: 246 PDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRA 305 PDGR++AST+GEIRVAGVRGREDGFYDF TKYLDD AELDVPAKVEDDVAD +R+LAIRA Sbjct: 244 PDGRVDASTIGEIRVAGVRGREDGFYDFATKYLDDGAELDVPAKVEDDVADEIRRLAIRA 303 Query: 306 FEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETA 365 F AIDCQGLARVDFFLTDDGPV+NEINTMPGFTTISMYPRMWAASGVDYPTLLA MV+TA Sbjct: 304 FRAIDCQGLARVDFFLTDDGPVVNEINTMPGFTTISMYPRMWAASGVDYPTLLAAMVDTA 363 Query: 366 LSRGIGLR 373 ++RG GLR Sbjct: 364 VARGTGLR 371 >sp|A3PXS0|DDL_MYCSJ Tax_Id=164757 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium sp.] Length = 371 Score = 580 bits (1496), Expect = e-164 Identities = 292/368 (79%), Positives = 320/368 (86%), Gaps = 1/368 (0%) Query: 7 RGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDAL 66 R +R RVAVV+GGRS+EHAISCVSAGSILRNLDP RF+V+A+GITP GSWVLTDG P+ L Sbjct: 4 RNQRTRVAVVYGGRSSEHAISCVSAGSILRNLDPERFDVVAVGITPDGSWVLTDGRPETL 63 Query: 67 AITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDG 125 AITD RLPEVS++SGT LALPADP G+LVSL P AGEVLA+VDVVFPVLHGPYGEDG Sbjct: 64 AITDGRLPEVSAESGTALALPADPGRRGELVSLSPAPAGEVLAAVDVVFPVLHGPYGEDG 123 Query: 126 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQ 185 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKL A GLP+G H VLRP R ++ +E + Sbjct: 124 TIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLLVAEGLPVGDHVVLRPGRANVTLDERE 183 Query: 186 RLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEF 245 RLGLP +VKPA + ELPAAI AARRHDPKVIVEA I GRELECGVLE+ Sbjct: 184 RLGLPVFVKPARGGSSIGVSRVSDWAELPAAIEAARRHDPKVIVEAGIAGRELECGVLEY 243 Query: 246 PDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRA 305 PDGR++AST+GEIRVAGVRGREDGFYDF TKYLDD AELDVPAKVEDDVAD +R+LAIRA Sbjct: 244 PDGRVDASTIGEIRVAGVRGREDGFYDFATKYLDDGAELDVPAKVEDDVADEIRRLAIRA 303 Query: 306 FEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETA 365 F AIDCQGLARVDFFLTDDGPV+NEINTMPGFTTISMYPRMWAASGVDYPTLLA MV+TA Sbjct: 304 FRAIDCQGLARVDFFLTDDGPVVNEINTMPGFTTISMYPRMWAASGVDYPTLLAAMVDTA 363 Query: 366 LSRGIGLR 373 ++RG GLR Sbjct: 364 VARGTGLR 371 >sp|Q9ZGN0|DDL_MYCSM Tax_Id=1772 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium smegmatis] Length = 373 Score = 574 bits (1479), Expect = e-162 Identities = 286/364 (78%), Positives = 316/364 (86%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAVV+GGRS+EHAISCVSAGSILRNLDP RFEV+AIGITP GSWVLTDG P+ LAIT Sbjct: 10 RTRVAVVYGGRSSEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAIT 69 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 D +LP V+ SGTELALPA P GQL++L G GE+LA+VDVVFPVLHGPYGEDGTIQG Sbjct: 70 DGKLPAVTEASGTELALPAAPNRSGQLLALGNGPGEILAAVDVVFPVLHGPYGEDGTIQG 129 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELAGVPYVG+GVLASAAGMDKE+TKKL +A GLPIG VLRP ++LD E+ +RLGL Sbjct: 130 LLELAGVPYVGSGVLASAAGMDKEYTKKLLAAEGLPIGDQVVLRPGVETLDLEQRERLGL 189 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKPA +DELPAA+A ARRHDPKVIVEAA+ GRELECGVLEFPDGR Sbjct: 190 PVFVKPARGGSSIGVSRVTAWDELPAAVALARRHDPKVIVEAAVIGRELECGVLEFPDGR 249 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 LEAST+GEIRVAGVRGREDGFYDF TKYL+DAAELDVPAKV+DDVAD +RQLA+RAF AI Sbjct: 250 LEASTVGEIRVAGVRGREDGFYDFATKYLEDAAELDVPAKVDDDVADEIRQLAVRAFTAI 309 Query: 310 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRG 369 CQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAA G+DYPTLLA MV+TA++RG Sbjct: 310 GCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAAGGIDYPTLLAAMVDTAIARG 369 Query: 370 IGLR 373 GLR Sbjct: 370 TGLR 373 >sp|A0QUZ7|DDL_MYCS2 Tax_Id=246196 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium smegmatis] Length = 373 Score = 574 bits (1479), Expect = e-162 Identities = 286/364 (78%), Positives = 316/364 (86%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAVV+GGRS+EHAISCVSAGSILRNLDP RFEV+AIGITP GSWVLTDG P+ LAIT Sbjct: 10 RTRVAVVYGGRSSEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAIT 69 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 D +LP V+ SGTELALPA P GQL++L G GE+LA+VDVVFPVLHGPYGEDGTIQG Sbjct: 70 DGKLPAVTEASGTELALPAAPNRSGQLLALGNGPGEILAAVDVVFPVLHGPYGEDGTIQG 129 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELAGVPYVG+GVLASAAGMDKE+TKKL +A GLPIG VLRP ++LD E+ +RLGL Sbjct: 130 LLELAGVPYVGSGVLASAAGMDKEYTKKLLAAEGLPIGDQVVLRPGVETLDLEQRERLGL 189 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKPA +DELPAA+A ARRHDPKVIVEAA+ GRELECGVLEFPDGR Sbjct: 190 PVFVKPARGGSSIGVSRVTAWDELPAAVALARRHDPKVIVEAAVIGRELECGVLEFPDGR 249 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 LEAST+GEIRVAGVRGREDGFYDF TKYL+DAAELDVPAKV+DDVAD +RQLA+RAF AI Sbjct: 250 LEASTVGEIRVAGVRGREDGFYDFATKYLEDAAELDVPAKVDDDVADEIRQLAVRAFTAI 309 Query: 310 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRG 369 CQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAA G+DYPTLLA MV+TA++RG Sbjct: 310 GCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAAGGIDYPTLLAAMVDTAIARG 369 Query: 370 IGLR 373 GLR Sbjct: 370 TGLR 373 >sp|A1T708|DDL_MYCVP Tax_Id=350058 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium vanbaalenii] Length = 367 Score = 572 bits (1475), Expect = e-161 Identities = 288/364 (79%), Positives = 316/364 (86%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R+RVAVV+GGRS+EHAISCVSAGSILRNLDP+RFEV+ +GITP+GSWVLTDG P+ LAIT Sbjct: 4 RIRVAVVYGGRSSEHAISCVSAGSILRNLDPQRFEVVPVGITPEGSWVLTDGRPETLAIT 63 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 D LP VS SGTELAL ADP GQL+SL AG+VLA+VDVVFPVLHGPYGEDGTIQG Sbjct: 64 DGALPGVSGSSGTELALAADPGRRGQLLSLGDAAGDVLAAVDVVFPVLHGPYGEDGTIQG 123 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELAGVPYVGAGVLASAAGMDKEFTKKL +AAGLP+G H VLRP ++ E+ +RLGL Sbjct: 124 LLELAGVPYVGAGVLASAAGMDKEFTKKLLTAAGLPVGDHVVLRPREATVSLEDRERLGL 183 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKP+ +D LPAAI ARRHDPKVIVEAAI GRELECGVLEFPDG Sbjct: 184 PVFVKPSRGGSSIGVSRVTAWDALPAAIELARRHDPKVIVEAAIPGRELECGVLEFPDGH 243 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 LEAST+GEIRVAGVRGREDGFYDFETKYLDD AELDVPAKV+D +A+AVR LAIRAF+AI Sbjct: 244 LEASTVGEIRVAGVRGREDGFYDFETKYLDDGAELDVPAKVDDAIAEAVRGLAIRAFDAI 303 Query: 310 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRG 369 DCQGLARVDFFLTD GPVINEINTMPGFTTISMYPRMWAASG+DYPTLLATMVETA++RG Sbjct: 304 DCQGLARVDFFLTDAGPVINEINTMPGFTTISMYPRMWAASGIDYPTLLATMVETAIARG 363 Query: 370 IGLR 373 GLR Sbjct: 364 TGLR 367 >sp|A4TE25|DDL_MYCGI Tax_Id=350054 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium gilvum] Length = 367 Score = 569 bits (1467), Expect = e-160 Identities = 286/364 (78%), Positives = 313/364 (85%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R+RVAVV+GGRS+EHAISCVSAGSILRNLDP RFEV A+GITP+GSWVLT+G P+ LAIT Sbjct: 4 RIRVAVVYGGRSSEHAISCVSAGSILRNLDPDRFEVTAVGITPEGSWVLTEGRPETLAIT 63 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 D +LP V+ SGT L L ADP GQLVSL AGEVLAS DVVFPVLHGPYGEDGTIQG Sbjct: 64 DGKLPGVTGDSGTALTLTADPARRGQLVSLGEAAGEVLASADVVFPVLHGPYGEDGTIQG 123 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELAGVPYVGAGVLASAAGMDKEFTKKL ++AGLP+G H VLR +L ++ +RLGL Sbjct: 124 LLELAGVPYVGAGVLASAAGMDKEFTKKLLASAGLPVGDHVVLRARDSTLSLQDRERLGL 183 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKP+ +DELPAAI ARRHDPKVI+EAA+ GRELECGVLEFPDG Sbjct: 184 PVFVKPSRGGSSIGVSRVTAWDELPAAIELARRHDPKVIIEAAVPGRELECGVLEFPDGH 243 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 LEASTLGEIRV GVRGREDGFYDFETKYLDD AELDVPAKV+DDVA+A+R L++RAF AI Sbjct: 244 LEASTLGEIRVEGVRGREDGFYDFETKYLDDGAELDVPAKVDDDVAEAIRALSLRAFTAI 303 Query: 310 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRG 369 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETAL+RG Sbjct: 304 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALARG 363 Query: 370 IGLR 373 GLR Sbjct: 364 TGLR 367 >sp|Q9CBS0|DDL_MYCLE Tax_Id=1769 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Mycobacterium leprae] Length = 384 Score = 552 bits (1422), Expect = e-155 Identities = 278/370 (75%), Positives = 313/370 (84%), Gaps = 4/370 (1%) Query: 8 GERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALA 67 G R+RVAVVFGGRSNEHA+SC+SAGSILRNLD +RF+V+A+GITP+G+W+LTD NPDALA Sbjct: 15 GGRVRVAVVFGGRSNEHAVSCLSAGSILRNLDRQRFDVVAVGITPEGTWMLTDPNPDALA 74 Query: 68 ITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAG----EVLASVDVVFPVLHGPYGE 123 I +R+LP VS +SG EL LPADPR GQLVSL GAG EVL SVDVVFPVLHGPYGE Sbjct: 75 IANRQLPAVSCESGIELTLPADPRRSGQLVSLSHGAGLGAGEVLTSVDVVFPVLHGPYGE 134 Query: 124 DGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREE 183 DGTIQGLLELA VPYVGAGVLASAAGMDKEFTKKL++A GLP+ + VLRP R +L R+E Sbjct: 135 DGTIQGLLELARVPYVGAGVLASAAGMDKEFTKKLFAAEGLPLSAYTVLRPLRPTLHRQE 194 Query: 184 LQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVL 243 +RL LP +VKPA + +LP+AIA ARRHDPKVIVEAA+NGRELECGVL Sbjct: 195 CERLSLPVFVKPARGGSSIGISRVSSWGQLPSAIAYARRHDPKVIVEAAVNGRELECGVL 254 Query: 244 EFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAI 303 E PDG + AS +GEIRVAGV G ED FYDF TKYLDDAAELDVPAKV+DDVAD VRQLAI Sbjct: 255 EMPDGTVAASAVGEIRVAGVSGSEDSFYDFTTKYLDDAAELDVPAKVDDDVADEVRQLAI 314 Query: 304 RAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVE 363 +AF AIDCQGLARVDFFLTDDGPVINEINTMPGFT SMYP++WA S VDYPTLLATMV+ Sbjct: 315 QAFRAIDCQGLARVDFFLTDDGPVINEINTMPGFTMTSMYPKLWAVSSVDYPTLLATMVD 374 Query: 364 TALSRGIGLR 373 TAL+RG+G+R Sbjct: 375 TALARGVGMR 384 >tr|B8ZS05|B8ZS05_MYCLB Tax_Id=561304 (ddlA)SubName: Full=D-alanine-D-alanine ligase A;[Mycobacterium leprae] Length = 384 Score = 552 bits (1422), Expect = e-155 Identities = 278/370 (75%), Positives = 313/370 (84%), Gaps = 4/370 (1%) Query: 8 GERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALA 67 G R+RVAVVFGGRSNEHA+SC+SAGSILRNLD +RF+V+A+GITP+G+W+LTD NPDALA Sbjct: 15 GGRVRVAVVFGGRSNEHAVSCLSAGSILRNLDRQRFDVVAVGITPEGTWMLTDPNPDALA 74 Query: 68 ITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAG----EVLASVDVVFPVLHGPYGE 123 I +R+LP VS +SG EL LPADPR GQLVSL GAG EVL SVDVVFPVLHGPYGE Sbjct: 75 IANRQLPAVSCESGIELTLPADPRRSGQLVSLSHGAGLGAGEVLTSVDVVFPVLHGPYGE 134 Query: 124 DGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREE 183 DGTIQGLLELA VPYVGAGVLASAAGMDKEFTKKL++A GLP+ + VLRP R +L R+E Sbjct: 135 DGTIQGLLELARVPYVGAGVLASAAGMDKEFTKKLFAAEGLPLSAYTVLRPLRPTLHRQE 194 Query: 184 LQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVL 243 +RL LP +VKPA + +LP+AIA ARRHDPKVIVEAA+NGRELECGVL Sbjct: 195 CERLSLPVFVKPARGGSSIGISRVSSWGQLPSAIAYARRHDPKVIVEAAVNGRELECGVL 254 Query: 244 EFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAI 303 E PDG + AS +GEIRVAGV G ED FYDF TKYLDDAAELDVPAKV+DDVAD VRQLAI Sbjct: 255 EMPDGTVAASAVGEIRVAGVSGSEDSFYDFTTKYLDDAAELDVPAKVDDDVADEVRQLAI 314 Query: 304 RAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVE 363 +AF AIDCQGLARVDFFLTDDGPVINEINTMPGFT SMYP++WA S VDYPTLLATMV+ Sbjct: 315 QAFRAIDCQGLARVDFFLTDDGPVINEINTMPGFTMTSMYPKLWAVSSVDYPTLLATMVD 374 Query: 364 TALSRGIGLR 373 TAL+RG+G+R Sbjct: 375 TALARGVGMR 384 >tr|B1MDP3|B1MDP3_MYCA9 Tax_Id=561007 SubName: Full=Probable D-alanine--D-alanine ligase DdlA;[Mycobacterium abscessus] Length = 381 Score = 514 bits (1325), Expect = e-144 Identities = 263/369 (71%), Positives = 302/369 (81%), Gaps = 4/369 (1%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 +R++VA+VFGGRS+EHAISCVSAGSILRNLD +EV+A+G+TP+G WVLTDG+P LAI Sbjct: 13 QRIKVALVFGGRSSEHAISCVSAGSILRNLDQAVYEVVAVGVTPEGGWVLTDGDPAQLAI 72 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGA-GEVLASVDVVFPVLHGPYGEDGTI 127 +DR LP+V+ SGTEL L DPR GQLV++ A G+VLASVDVVFPVLHGPYGEDGTI Sbjct: 73 SDRTLPQVTDASGTELLLATDPRRAGQLVNVDSSAAGQVLASVDVVFPVLHGPYGEDGTI 132 Query: 128 QGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRL 187 QGLLELAGVPYVGAGVLASAAGMDKEFTKKL +A GLPIG +AV+RP +L ++ + L Sbjct: 133 QGLLELAGVPYVGAGVLASAAGMDKEFTKKLLAAEGLPIGKYAVIRPRDTTLTLDQREDL 192 Query: 188 GLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPD 247 GLP +VKPA ++ELPAAIA AR++DPKVIVEAAI GRELECGVLEFPD Sbjct: 193 GLPVFVKPARAGSSFGVSRVTAWEELPAAIAHARQYDPKVIVEAAIVGRELECGVLEFPD 252 Query: 248 GRLEASTLGEIRVAGVRGRE---DGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIR 304 G AS LGEIRV GV + FYDFETKYLDD AELDVPAKV+DDV+D +R+LA+ Sbjct: 253 GDTRASVLGEIRVEGVNRDQTAAGAFYDFETKYLDDTAELDVPAKVDDDVSDQIRELAVA 312 Query: 305 AFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVET 364 AF AIDCQGLARVDFFL +DGP+INEINTMPGFTTISMYPRMW A+GVDYPTLL MV T Sbjct: 313 AFRAIDCQGLARVDFFLAEDGPLINEINTMPGFTTISMYPRMWDATGVDYPTLLDAMVRT 372 Query: 365 ALSRGIGLR 373 AL+RG GLR Sbjct: 373 ALARGTGLR 381 >sp|Q5YRY7|DDL_NOCFA Tax_Id=37329 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Nocardia farcinica] Length = 363 Score = 477 bits (1227), Expect = e-132 Identities = 239/364 (65%), Positives = 286/364 (78%), Gaps = 4/364 (1%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R+RVAVVFGGRSNEHA+SCVSAGS+LR+LDP R+E + IGITPQG WVL + + A+ ++ Sbjct: 4 RIRVAVVFGGRSNEHAVSCVSAGSVLRHLDPTRYEAVPIGITPQGGWVLANSDVAAIGLS 63 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 LP V + GT L L ADP GG+LV+L AG VL +VDVVFP+LHGP+GEDGT+QG Sbjct: 64 HEALPSVDA-GGTALTLTADPTRGGELVALDD-AGAVLGTVDVVFPILHGPFGEDGTLQG 121 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 +LELAGVPYVG GVLASAAGMDKEFTKKL +A GLP+G VLRP +L E+ +RLGL Sbjct: 122 MLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGTQVVLRPGTATLTEEQRERLGL 181 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKPA + L AIAAAR HDPKVIVEA I GRE+ECGVLEFPDGR Sbjct: 182 PVFVKPARAGSSIGITKVDDWAALDTAIAAAREHDPKVIVEAGIVGREVECGVLEFPDGR 241 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 + AS L EIR+ G FYDF+TKYLDD E DVPAK++DD+A+ VR+LA+RAF+A+ Sbjct: 242 ISASVLAEIRMP--EGDGPQFYDFDTKYLDDVCEFDVPAKLDDDIAEQVRELAVRAFQAL 299 Query: 310 DCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSRG 369 DCQGLARVDFF+T DGPVINEINTMPGFT+ISMYPRMW A+G+DY TL++T++ETAL+RG Sbjct: 300 DCQGLARVDFFVTADGPVINEINTMPGFTSISMYPRMWEATGIDYGTLVSTLIETALARG 359 Query: 370 IGLR 373 GLR Sbjct: 360 TGLR 363 >sp|Q0S2F6|DDL_RHOSR Tax_Id=101510 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Rhodococcus sp.] Length = 368 Score = 471 bits (1212), Expect = e-131 Identities = 240/365 (65%), Positives = 285/365 (78%), Gaps = 2/365 (0%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAV+FGGRSNEH++SCVSAGS+LRNLDP R+EV+ IGIT +GSWVL +P+ L+I Sbjct: 5 RTRVAVIFGGRSNEHSVSCVSAGSVLRNLDPERYEVVPIGITTEGSWVLGSTDPETLSIR 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDGTIQ 128 R LP V + G+ LAL ADP G LV+L G AG++LASVDVVFPVLHG YGEDGTIQ Sbjct: 65 GRALPSVDAD-GSALALTADPTRSGDLVALDDGEAGKILASVDVVFPVLHGAYGEDGTIQ 123 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVG GVLASAAGMDKEFTKKL +A GLPIG VLRP +L E+ RL Sbjct: 124 GLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPIGFQVVLRPGTATLTDEQKSRLH 183 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA + L AIA AR HDPKVIVE+ I GRE+ECGVLEFPDG Sbjct: 184 LPVFVKPARGGSSIGITRVAEWAALDDAIAHARLHDPKVIVESGIIGREVECGVLEFPDG 243 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 + AS + EIR+ G ++ FYDF++KYLDD E DVPAK+++ V+D +R+LA+RAF A Sbjct: 244 DVRASVIAEIRMPEGAGDDEAFYDFDSKYLDDVCEFDVPAKLDESVSDEIRELAVRAFSA 303 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGLARVDFF+T+DGPVINEINTMPGFT+ISMYPRMW A GVDY TL++T+V+TAL+R Sbjct: 304 LDCQGLARVDFFVTEDGPVINEINTMPGFTSISMYPRMWGAVGVDYGTLVSTLVDTALAR 363 Query: 369 GIGLR 373 GIGLR Sbjct: 364 GIGLR 368 >sp|C1B2N8|DDL_RHOOB Tax_Id=632772 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Rhodococcus opacus] Length = 368 Score = 471 bits (1211), Expect = e-131 Identities = 241/365 (66%), Positives = 284/365 (77%), Gaps = 2/365 (0%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAV+FGGRSNEH++SCVSAGS+LRNLDP R+EV+ IGIT +GSWVL +P++L+I Sbjct: 5 RTRVAVIFGGRSNEHSVSCVSAGSVLRNLDPERYEVVPIGITTEGSWVLGSTDPESLSIR 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDGTIQ 128 R LP V + G+ LAL ADP G LV+L G AG++LASVDVVFPVLHG YGEDGTIQ Sbjct: 65 GRSLPSVDAD-GSALALTADPTRSGDLVALDDGEAGKILASVDVVFPVLHGAYGEDGTIQ 123 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVG GVLASAAGMDKEFTKKL +A GLPIG VLRP +L E+ RL Sbjct: 124 GLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPIGFQVVLRPGTATLTDEQRSRLH 183 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA + L AIA ARRHDPKVIVE+ I GRE+ECGVLEFPDG Sbjct: 184 LPVFVKPARGGSSIGITRVAEWAALDDAIAHARRHDPKVIVESGIAGREVECGVLEFPDG 243 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 + AS + EIR+ ++ FYDF++KYLDD E DVPAK+ED V+D +R LA+RAF A Sbjct: 244 DVRASVIAEIRMPEGADDDEAFYDFDSKYLDDVCEFDVPAKLEDSVSDEIRALAVRAFSA 303 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGLARVDFF+T+DGPVINEINTMPGFT+ISMYPRMW A GVDY TL++T+V+TAL+R Sbjct: 304 LDCQGLARVDFFVTEDGPVINEINTMPGFTSISMYPRMWDAVGVDYGTLVSTLVDTALAR 363 Query: 369 GIGLR 373 G GLR Sbjct: 364 GTGLR 368 >sp|C0ZXN9|DDL_RHOE4 Tax_Id=234621 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Rhodococcus erythropolis] Length = 368 Score = 460 bits (1184), Expect = e-127 Identities = 231/365 (63%), Positives = 281/365 (76%), Gaps = 2/365 (0%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAV+FGGRSNEH++SCVSAGS+L NLDP R++V+ IGIT GSWVL +P +LAI+ Sbjct: 5 RTRVAVIFGGRSNEHSVSCVSAGSVLSNLDPDRYDVVPIGITVDGSWVLGSSDPSSLAIS 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDGTIQ 128 R LP V + GT + L ADP G+++S AG VLASVDVVFPVLHG YGEDGTIQ Sbjct: 65 GRALPSVD-KDGTSVVLSADPTREGEVISFDGSDAGAVLASVDVVFPVLHGAYGEDGTIQ 123 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVG GVLASAAGMDKEFTKKL +A GLP+G VLRP +L E+ LG Sbjct: 124 GLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGVQVVLRPGIATLTEEQKAELG 183 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +D L AIA AR HDPKVIVE AI GRE+ECGVLEFP+G Sbjct: 184 LPVFVKPARGGSSIGITRVSNWDGLDGAIAHARLHDPKVIVEGAIIGREVECGVLEFPNG 243 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 ++AS + EIR+ D FYDF+TKYLDD E D+PAK+++ V+D +R+LA+RAF+A Sbjct: 244 DVKASVVAEIRMPDADTDSDAFYDFDTKYLDDVCEFDIPAKLDESVSDQIRELAVRAFKA 303 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGL+RVDFF+T DGPVINEINTMPGFT+ISMYP+MW A+G+DY TL++T+V+TA++R Sbjct: 304 LDCQGLSRVDFFVTADGPVINEINTMPGFTSISMYPKMWNATGIDYRTLISTLVDTAIAR 363 Query: 369 GIGLR 373 G GLR Sbjct: 364 GTGLR 368 >tr|C3JLR0|C3JLR0_RHOER Tax_Id=596309 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Rhodococcus erythropolis SK121] Length = 368 Score = 460 bits (1183), Expect = e-127 Identities = 231/365 (63%), Positives = 280/365 (76%), Gaps = 2/365 (0%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R RVAV+FGGRSNEH++SCVSAGS+L NLDP R++V+ IGIT GSWVL +P +LAI Sbjct: 5 RTRVAVIFGGRSNEHSVSCVSAGSVLSNLDPDRYDVVPIGITVDGSWVLGSSDPSSLAIR 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDGTIQ 128 R LP V + GT + L ADP G+++S AG VLASVDVVFPVLHG YGEDGTIQ Sbjct: 65 GRALPSVD-KDGTSVVLSADPTREGEVISFDGSDAGAVLASVDVVFPVLHGAYGEDGTIQ 123 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLELAGVPYVG GVLASAAGMDKEFTKKL +A GLP+G VLRP +L E+ LG Sbjct: 124 GLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGVQVVLRPGTATLTEEQKAELG 183 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +D L AIA AR HDPKVIVE AI GRE+ECGVLEFP+G Sbjct: 184 LPVFVKPARGGSSIGITRVSNWDGLDGAIAHARLHDPKVIVEGAIIGREVECGVLEFPNG 243 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 ++AS + EIR+ D FYDF+TKYLDD E D+PAK+++ V+D +R+LA+RAF+A Sbjct: 244 DVKASVVAEIRMPDSDADSDAFYDFDTKYLDDVCEFDIPAKLDESVSDQIRELAVRAFKA 303 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +DCQGL+RVDFF+T DGPVINEINTMPGFT+ISMYP+MW A+G+DY TL++T+V+TA++R Sbjct: 304 LDCQGLSRVDFFVTADGPVINEINTMPGFTSISMYPKMWNATGIDYRTLISTLVDTAVAR 363 Query: 369 GIGLR 373 G GLR Sbjct: 364 GTGLR 368 >tr|A4FMM8|A4FMM8_SACEN Tax_Id=405948 (ddl)SubName: Full=D-alanylalanine synthetase; EC=6.3.2.4;[Saccharopolyspora erythraea] Length = 362 Score = 435 bits (1118), Expect = e-120 Identities = 219/366 (59%), Positives = 277/366 (75%), Gaps = 10/366 (2%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 + RVAVVFGGRS EH ISCVSAGS+L +LD RFEV+ +GIT +G+WVL +P+AL I Sbjct: 5 KTRVAVVFGGRSTEHGISCVSAGSVLAHLDRDRFEVVPVGITKEGAWVLAGDDPEALEIQ 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPG-AGEVLASVDVVFPVLHGPYGEDGTIQ 128 DRR PE++S G +ALP DP L+ L PG GEVL+SVDVVFPVLHG +GEDGTIQ Sbjct: 65 DRRTPEITS--GKAVALPGDPT--RDLMYLEPGRGGEVLSSVDVVFPVLHGAFGEDGTIQ 120 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GLLE+AGVPY G GVL+SA MDKE+TKKL +A GL +G + VLR + +LD+++ +RLG Sbjct: 121 GLLEMAGVPYAGPGVLSSAVAMDKEYTKKLLAAEGLAVGTYEVLRRDQSTLDQQQRERLG 180 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +L AIA ARR DPKVI+E+A+ GRE+ECGVLEFPDG Sbjct: 181 LPVFVKPARAGSSLGITKVTDHADLDDAIAEARRTDPKVIIESAVTGREVECGVLEFPDG 240 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 R+EAS E+RV G + +YD+E+KYLDD E D+PAK+ DD + +R+ A+ AF A Sbjct: 241 RVEASLPAELRVTG----DSTWYDYESKYLDDVTEFDIPAKIGDDAIERMREAAVTAFRA 296 Query: 309 IDCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALS 367 ++CQGLARVDFF+ DDG ++NE+NTMPGFT IS+YPRMWA +GVDYPTLL+T++ETA++ Sbjct: 297 LECQGLARVDFFVADDGELIVNEVNTMPGFTAISLYPRMWAQTGVDYPTLLSTLIETAIA 356 Query: 368 RGIGLR 373 RG GLR Sbjct: 357 RGTGLR 362 >tr|C7MY26|C7MY26_SACVD Tax_Id=471857 SubName: Full=D-alanine--D-alanine ligase;[Saccharomonospora viridis] Length = 365 Score = 411 bits (1057), Expect = e-113 Identities = 214/365 (58%), Positives = 262/365 (71%), Gaps = 5/365 (1%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 + RVAVVFGGRS EH ISCVSAGSI+ NLDP RFEV+ IGIT +G WVL +P+ L I Sbjct: 5 KTRVAVVFGGRSTEHTISCVSAGSIMANLDPDRFEVVPIGITQEGGWVLGTNDPEQLRIK 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 R LP V + G L L DP GG L EVL+ VDVVFP LHG +GEDGTIQG Sbjct: 65 GRELPVV--EHGKTLVLAGDPTTGGVLSLTAGEPAEVLSGVDVVFPALHGAFGEDGTIQG 122 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELA +PYVG+GV ASAA MDKE+ KKL +A GL +G +AV+R + +L EE +RLGL Sbjct: 123 LLELADIPYVGSGVFASAAAMDKEYAKKLLAAEGLEVGRYAVVRRGQDTLPAEERERLGL 182 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKPA + +L AAIA AR+ DPKV+VEA GRE+ECGVLEF DGR Sbjct: 183 PVFVKPARAGSSIGISRVTDWSQLDAAIAHARQTDPKVLVEAETVGREVECGVLEFADGR 242 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 +EAS EIRV + D +YDFETKYL + AELD+PAK++D + + +R +A+RAF A+ Sbjct: 243 VEASFPSEIRV--LSDDADAWYDFETKYLGEDAELDIPAKLDDTITERLRDMAVRAFTAL 300 Query: 310 DCQGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 +CQGLARVDFF+ DG + +NE+NTMPGFT S YP+MW +G+DYPTLL T+VETAL+R Sbjct: 301 ECQGLARVDFFVGPDGTLTVNEVNTMPGFTPTSAYPKMWEVTGIDYPTLLTTLVETALAR 360 Query: 369 GIGLR 373 G GLR Sbjct: 361 GTGLR 365 >tr|C6WG31|C6WG31_ACTMD Tax_Id=446462 SubName: Full=D-alanine/D-alanine ligase; EC=6.3.2.4;[Actinosynnema mirum] Length = 355 Score = 396 bits (1018), Expect = e-108 Identities = 209/365 (57%), Positives = 260/365 (71%), Gaps = 15/365 (4%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 + +VAVVFGGRS+EH +SCVSAGS+L +LD RFEV+ +GIT QG+WV+ G+ AL I Sbjct: 5 KTKVAVVFGGRSSEHTVSCVSAGSVLAHLDRERFEVVPVGITRQGAWVVGSGDLAALEIR 64 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 DR++P V + P GG+L ++ P + L VDVVFP+LHG +GEDGT+QG Sbjct: 65 DRQMPTVDALV---------PVSGGELTTVSPDSA--LDGVDVVFPLLHGAWGEDGTVQG 113 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 LLELA +PYVG GVLASAA MDKEFTK + AAGL +G AVLR + +L + RLGL Sbjct: 114 LLELADLPYVGPGVLASAAAMDKEFTKTILRAAGLEVGSFAVLRRDQATLSEADRDRLGL 173 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKPA + +L AAIA AR+ DPKVI+EAA+ GRE+ECGVLE PDGR Sbjct: 174 PLFVKPARAGSSVGITKVTDWADLDAAIAFARQTDPKVIIEAAVTGREVECGVLELPDGR 233 Query: 250 LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEAI 309 +EAS E+RV G G D +YDF+ KYLDD E D+PAK+ DD + +R LA+ AF A+ Sbjct: 234 VEASLPAELRVVG--GGVD-WYDFDAKYLDDVCEFDIPAKLADDTTERLRALAVEAFRAL 290 Query: 310 DCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 DCQGLARVDFF+T+DG V+NEINTMPGFT ISMYPRMW +G Y LL T+VETA++R Sbjct: 291 DCQGLARVDFFVTEDGGLVVNEINTMPGFTPISMYPRMWEVTGTSYRDLLTTLVETAIAR 350 Query: 369 GIGLR 373 G GLR Sbjct: 351 GTGLR 355 >tr|A8M645|A8M645_SALAI Tax_Id=391037 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Salinispora arenicola] Length = 360 Score = 390 bits (1001), Expect = e-106 Identities = 209/365 (57%), Positives = 262/365 (71%), Gaps = 9/365 (2%) Query: 13 VAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAITDRR 72 +AVVFGGRS EH ISCVSAGS+L LDP +EV+ +GI+ G WVLT G+ LAITDRR Sbjct: 1 MAVVFGGRSPEHGISCVSAGSVLAALDPDEYEVVPVGISRAGQWVLTGGDSSQLAITDRR 60 Query: 73 LPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQGLLE 132 LPEV+++SGT + L ADP GG LV P LA VDVVFPVLHG YGEDGTIQG+LE Sbjct: 61 LPEVTAESGTAVVLNADPSSGGLLVLDPAEGSRALADVDVVFPVLHGAYGEDGTIQGMLE 120 Query: 133 LAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGLPAY 192 +AG+PYVGA V ASAA MDKEFTKKL +A G+P+GP+AVLR S +L ++ QRLGLP + Sbjct: 121 MAGIPYVGANVFASAAAMDKEFTKKLCAAEGIPVGPYAVLR-SGMTLTEQDKQRLGLPVF 179 Query: 193 VKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGRL-E 251 VKP+ + +L A+A AR+ DPKV+VE+A+ GRE+ECGVLE G + E Sbjct: 180 VKPSRAGSSFGITRVTDWADLDDAVANARKIDPKVLVESAVIGREIECGVLEAEAGGVPE 239 Query: 252 ASTLGEIRVAGVRGREDGFYDFETKYLD-DAA-ELDVPAKVEDDVADAVRQLAIRAFEAI 309 AS L E+RV G + FYDFE KY+D DAA E D+PA + + V V++ A+RAF A+ Sbjct: 240 ASALAEVRVVG----DYDFYDFEAKYIDADAACEYDIPADLPERVTRQVQEYAVRAFTAL 295 Query: 310 DCQGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 DC GLAR DFF+T + V +NE+NTMPGFT SM+PRMWAASG++Y L+ ++ TAL+ Sbjct: 296 DCAGLARADFFVTPELDVYLNEVNTMPGFTPTSMFPRMWAASGLEYQKLVNRLIRTALNG 355 Query: 369 GIGLR 373 G G R Sbjct: 356 GAGRR 360 >tr|C8XEZ8|C8XEZ8_NAKMY Tax_Id=479431 SubName: Full=D-alanine/D-alanine ligase; EC=6.3.2.4;[Nakamurella multipartita] Length = 367 Score = 389 bits (1000), Expect = e-106 Identities = 216/373 (57%), Positives = 258/373 (69%), Gaps = 17/373 (4%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 +R+RVAVVFGGRS EH +SC+SA +L N+D F+V A+GITP G W+ D P A+ Sbjct: 4 DRIRVAVVFGGRSGEHPVSCISAAGVLANIDTDLFDVTAVGITPAGRWLQMD--PAAIPT 61 Query: 69 TDR-RLPEVSSQSGTELALPADPRWGGQLVSLPPGAGE-VLASVDVVFPVLHGPYGEDGT 126 T LPEVS+ G+ +ALP DP LVS+ P + V+VVFPVLHGPYGEDGT Sbjct: 62 TGGPTLPEVST--GSAVALPVDPT-AAALVSIDPSVDRSAVVDVEVVFPVLHGPYGEDGT 118 Query: 127 IQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQR 186 IQGLLELAGVPYVGAGVLASAA MDKEFTKKL +A GLP+G VLRP +L E+ QR Sbjct: 119 IQGLLELAGVPYVGAGVLASAAAMDKEFTKKLLAAEGLPVGDWVVLRPGTPTLTAEQKQR 178 Query: 187 LGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFP 246 LGLP +VKPA + EL AIA AR DPKV+VEAA+ GRE+ECGVLE P Sbjct: 179 LGLPVFVKPARAGSSLGVSRVAEWAELDRAIAIARETDPKVLVEAAVVGREVECGVLEHP 238 Query: 247 DGRLEASTLGEIRVAGVRGREDGFYDFETKYLDD-AAELDVPAKVEDDVADAVRQLAIRA 305 DGR+EAS EI V G G E FYDF+ KYLDD AA D+PA + D+V + +L+ RA Sbjct: 239 DGRIEASPPAEIHVGG--GYE--FYDFDAKYLDDTAASFDIPADLPDEVTARIHELSRRA 294 Query: 306 FEAIDCQGLARVDFFLTDDGP-----VINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 F A+D QGLARVDFF+ DG VINE+NT+PGFT ISMYP MWA +GV Y L+ Sbjct: 295 FAALDAQGLARVDFFVRPDGDLADRVVINEVNTLPGFTPISMYPAMWAKAGVSYRDLITV 354 Query: 361 MVETALSRGIGLR 373 ++ TAL+RG GLR Sbjct: 355 LIRTALARGTGLR 367 >tr|A4X4E2|A4X4E2_SALTO Tax_Id=369723 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Salinispora tropica] Length = 368 Score = 387 bits (994), Expect = e-105 Identities = 207/368 (56%), Positives = 259/368 (70%), Gaps = 9/368 (2%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 ++RVAVVFGGRS EH ISCVSAGS+L LDP +EV+ +GI+ G WVLT +P LAI+ Sbjct: 6 KIRVAVVFGGRSPEHGISCVSAGSVLAALDPDEYEVVPVGISRAGQWVLTGSDPAELAIS 65 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 RRLPEV+++SG + L ADP G +V LA VDVVFPVLHG YGEDG+IQG Sbjct: 66 ARRLPEVTAESGAAIMLNADPSHSGLMVLDATAGPRALADVDVVFPVLHGAYGEDGSIQG 125 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 +LE+AG+PYVGA V ASAA MDKEFTKKL +A G+PIGP+ VLR S +L ++ QRLGL Sbjct: 126 MLEMAGIPYVGANVFASAAAMDKEFTKKLCAAEGIPIGPYVVLR-SGMTLTEQDKQRLGL 184 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDGR 249 P +VKP+ + EL AA+A AR+ D KV+VEAA+ GRE+ECGVLE G Sbjct: 185 PVFVKPSRAGSSFGITKISDWAELDAAVATARQIDSKVLVEAAVVGREIECGVLEGEAGG 244 Query: 250 L-EASTLGEIRVAGVRGREDGFYDFETKYLD--DAAELDVPAKVEDDVADAVRQLAIRAF 306 + EAS L E+RV G E FYDFE KY+D A E D+PA + + V V++ A+RAF Sbjct: 245 VPEASVLAEVRVVG----EYDFYDFEAKYIDAESACEYDIPAGLSERVTRQVQEYAVRAF 300 Query: 307 EAIDCQGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETA 365 A+DC GLAR DFF+T + + +NEINTMPGFT SM+PRMWAASG++YP L+ ++ TA Sbjct: 301 TALDCAGLARADFFVTPELDIYLNEINTMPGFTPSSMFPRMWAASGLEYPKLVNRLIRTA 360 Query: 366 LSRGIGLR 373 L RG G R Sbjct: 361 LQRGAGPR 368 >tr|C4RC43|C4RC43_9ACTO Tax_Id=219305 SubName: Full=D-alanine-D-alanine ligase;[Micromonospora sp. ATCC 39149] Length = 365 Score = 384 bits (986), Expect = e-104 Identities = 205/365 (56%), Positives = 257/365 (70%), Gaps = 8/365 (2%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 + RVA+VFGGRS EH ISCVSAGS+L LDP FEV+ +GIT G WVLT +P LAI+ Sbjct: 6 KTRVALVFGGRSPEHGISCVSAGSVLGALDPDEFEVVPVGITRAGKWVLTSADPAQLAIS 65 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQG 129 RRLPE+++ +G +L L ADP G +V P +A VDVVFPVLHG YGEDGTIQG Sbjct: 66 ARRLPEITADAGADLVLRADPTGSGLMVLDPAEGPRAIADVDVVFPVLHGAYGEDGTIQG 125 Query: 130 LLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLGL 189 +LE+AG+PYVGA V ASAA MDKEFTKKL + G+P+GP+AVLR + +L E+ +RLGL Sbjct: 126 MLEMAGIPYVGANVFASAAAMDKEFTKKLCAVEGIPVGPYAVLR-NGVTLSEEDKRRLGL 184 Query: 190 PAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLE-FPDG 248 P +VKP+ + +L AA+AAAR DPKV+VEAAI GRE+ECGVLE G Sbjct: 185 PVFVKPSRAGSSFGITKVDDWVDLEAAVAAAREIDPKVLVEAAIVGREIECGVLEGEAGG 244 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 EAS L E+R G + +YDFE KYL + E D+PA + + V V++ A+RAF A Sbjct: 245 GAEASVLVEVRAGG----DHDWYDFEAKYLSE-PEYDLPATLPEHVTRQVQEYAVRAFAA 299 Query: 309 IDCQGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALS 367 +DC GLARVDFF+T D V +NEINTMPGFT SM+P MWAASG++YP L+ ++ TA Sbjct: 300 LDCAGLARVDFFVTPDLDVYLNEINTMPGFTPTSMFPLMWAASGLEYPKLVNRLIRTAQR 359 Query: 368 RGIGL 372 RG+GL Sbjct: 360 RGVGL 364 >tr|C4LJE7|C4LJE7_CORK4 Tax_Id=645127 (ddlA)SubName: Full=D-alanine-D-alanine ligase; EC=6.3.2.4;[Corynebacterium kroppenstedtii] Length = 412 Score = 384 bits (985), Expect = e-104 Identities = 195/358 (54%), Positives = 255/358 (71%), Gaps = 6/358 (1%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R+RVAVV+GGRS+EH+ISCVSAG+++ +LDP R++V+ IGIT G WV+ +P L+I Sbjct: 54 RIRVAVVYGGRSSEHSISCVSAGAVISHLDPDRYQVVPIGITRDGRWVVGSSDPKELSIR 113 Query: 70 DRRLPEVSSQSGTELALPADPRWGGQLVSLP-PGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 +R+LPEV ++GT L+L DP+ G+ V P G+V A VDV+FPVLHG +GEDGT+Q Sbjct: 114 ERQLPEV--KAGTSLSLSLDPQHAGRFVYADGPDVGQVFADVDVIFPVLHGGFGEDGTVQ 171 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GL ++A VPYVGAGVLASAA MDKEFTKKL +A GLPIG VLR +R SL EE LG Sbjct: 172 GLFDMASVPYVGAGVLASAASMDKEFTKKLAAAEGLPIGRDVVLRETR-SLTEEEKNLLG 230 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA +DEL A+ AR+HD KVIVE+ I G E+ECGVL+ PDG Sbjct: 231 LPVFVKPARGGSSIGISKVDQWDELDDALDLARQHDSKVIVESMIVGTEVECGVLQRPDG 290 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 +EAS ++ ++GFY F+TKYLD+ +P +DD +R+LA+ F A Sbjct: 291 TVEASLPAQLE--DTESGDEGFYGFDTKYLDNVITAQIPPHFDDDTIRHIRELAVETFHA 348 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETAL 366 +DC+GLAR+DFF+TD GPV+NEINTMPGFT ISMYP+M+ A G+DYP LL +++ A+ Sbjct: 349 LDCEGLARIDFFVTDRGPVLNEINTMPGFTPISMYPQMFGAMGIDYPDLLDLLIQRAM 406 >tr|C0WG02|C0WG02_9CORY Tax_Id=525260 (ddl)SubName: Full=D-alanyl-alanine synthetase A; EC=6.3.2.4;[Corynebacterium accolens ATCC 49725] Length = 355 Score = 367 bits (942), Expect = 1e-99 Identities = 185/360 (51%), Positives = 258/360 (71%), Gaps = 9/360 (2%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 E+ RVAV++GGRS EH++SCVSAG+I+++LDP +F+V+ IGIT +G+W T G+ + L I Sbjct: 3 EKTRVAVLYGGRSTEHSVSCVSAGAIMKHLDPEKFQVVPIGITREGTW--TPGDTEGLEI 60 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 D +PEV + GTELAL ADP G++ ++ G+ + A VDV+FP+LHGPYGEDGT+Q Sbjct: 61 VDGVMPEV--KRGTELALSADPTRKGEIRAISDGS--LYAQVDVIFPILHGPYGEDGTMQ 116 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GL EL+G+PYVG GVLAS+ GMDKEFTKK+ SAAGLP+ P +++ R L EE +RLG Sbjct: 117 GLFELSGIPYVGPGVLASSVGMDKEFTKKILSAAGLPVAPEVIVQ-GRTELTVEEKERLG 175 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA + + P A+ A D K++VE I GRE+E GVL++PDG Sbjct: 176 LPVFVKPARGGSSIGVSKVSDWADFPEAVRIALEDDDKILVEPEIVGREVEVGVLQYPDG 235 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 L AS ++ G+ ++GFY FETKYLD+ +PA +++ +R +AIRAF+A Sbjct: 236 ELIASVPALLK--GIDDSDEGFYGFETKYLDNVVTAQIPAPFPEELTAQLRDMAIRAFKA 293 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 ++C GL+RVDFF+T++G INE+NT+PGFT ISMYP++ AASGVDYP+LL ++ +A +R Sbjct: 294 LNCTGLSRVDFFVTEEGLYINEVNTLPGFTPISMYPQVLAASGVDYPSLLEVLIASAEAR 353 >sp|Q8FPQ9|DDL_COREF Tax_Id=152794 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Corynebacterium efficiens] Length = 361 Score = 365 bits (938), Expect = 4e-99 Identities = 186/365 (50%), Positives = 255/365 (69%), Gaps = 8/365 (2%) Query: 4 SSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNP 63 S+ ++RVAV++GGRS EH++SCVSAG+I+ +LDP ++EVI +GIT G+WV+ + +P Sbjct: 2 SNSNSAKVRVAVLYGGRSAEHSVSCVSAGAIIAHLDPEKYEVIPVGITTDGAWVVGESDP 61 Query: 64 DALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGE 123 + L + DR +PEV Q E+ DP G+ G + A+ DV+FPVLHG +GE Sbjct: 62 ERLRLVDRTMPEV--QRREEIRPSLDPAHRGEFHFAD---GSLYATADVIFPVLHGRFGE 116 Query: 124 DGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREE 183 DGTIQG+ L+ +P VG GVL+SAAGMDKEFTKKL +A GLPIG +LR + D E+ Sbjct: 117 DGTIQGMFALSDIPVVGPGVLSSAAGMDKEFTKKLMAAEGLPIGREVILRDRAELTDAEK 176 Query: 184 LQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVL 243 + LGLP +VKPA +++LPAA+ AR+HD KVIVE+ I G E+ECGVL Sbjct: 177 -KLLGLPVFVKPARGGSSIGISKVSRWEDLPAAVDLARQHDEKVIVESEIVGPEVECGVL 235 Query: 244 EFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAI 303 ++PDGR+ AS +R G E GFYDF+TKYLD+ ++PA +++++ + V+ LA+ Sbjct: 236 QYPDGRIVASLPAMLR--GTEDGEGGFYDFDTKYLDNVVTAEIPAPLDEEIIELVQSLAV 293 Query: 304 RAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVE 363 F+A+ C+GLARVDFF+T +GPV+NEINTMPGFT ISMYP+M+AASGV Y LL +V+ Sbjct: 294 ETFQALACEGLARVDFFVTANGPVLNEINTMPGFTPISMYPQMFAASGVGYEELLDVLVQ 353 Query: 364 TALSR 368 AL R Sbjct: 354 QALHR 358 >tr|C6R8U0|C6R8U0_9CORY Tax_Id=553206 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Corynebacterium tuberculostearicum SK141] Length = 353 Score = 363 bits (931), Expect = 2e-98 Identities = 185/360 (51%), Positives = 251/360 (69%), Gaps = 9/360 (2%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 E+ RVAV++GGRS EH++SCVSAG+I+ +LDP +FEV+ IGIT +G+W T G + L I Sbjct: 3 EKTRVAVIYGGRSTEHSVSCVSAGAIMNHLDPEKFEVVPIGITREGTW--TPGTTEGLEI 60 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 D +PEV+ G EL L DP GQ ++ G + A VDVVFP+LHGP+GEDGTIQ Sbjct: 61 VDGVMPEVNP--GAELTLSLDPNARGQFHNVTDGT--LFAEVDVVFPILHGPFGEDGTIQ 116 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GL EL+G+PYVG GVLAS+ GMDKEFTKK+ +AA LP+ P +L+ R L +E QRLG Sbjct: 117 GLFELSGLPYVGPGVLASSVGMDKEFTKKVLAAADLPVAPEVILK-GRTELSEDEKQRLG 175 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA ++E PAA+ A D K++VE I G+E+E GVL + DG Sbjct: 176 LPVFVKPARGGSSIGVSKVNSWEEFPAAVDLALEDDEKILVEPEIVGQEVEIGVLHYADG 235 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 L AS +AG+ ++GFY F+TKYLD+ ++PA ++ + +R +AIRAFEA Sbjct: 236 TLLASV--PALLAGIDDSDEGFYGFDTKYLDNVVTAEIPAPFAPELTEKLRDMAIRAFEA 293 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 ++C+GL+RVDFF+T++ INEINT+PGFT ISMYP++ AASGV+YP LL ++E AL++ Sbjct: 294 LNCEGLSRVDFFVTEESVYINEINTLPGFTPISMYPQVLAASGVEYPALLEALIEQALAK 353 >tr|C2BR27|C2BR27_9CORY Tax_Id=525264 (ddl)SubName: Full=D-alanyl-alanine synthetase A; EC=6.3.2.4;[Corynebacterium pseudogenitalium ATCC 33035] Length = 353 Score = 363 bits (931), Expect = 2e-98 Identities = 185/360 (51%), Positives = 250/360 (69%), Gaps = 9/360 (2%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAI 68 E+ RVAV++GGRS EH++SCVSAG+I+ +LDP +FEV+ IGIT +G+W T G + L I Sbjct: 3 EKTRVAVIYGGRSTEHSVSCVSAGAIMNHLDPEKFEVVPIGITREGTW--TPGTTEGLEI 60 Query: 69 TDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 D +PEVS G EL L DP GQ ++ G + A VDVVFP+LHGP+GEDGT+Q Sbjct: 61 VDGVMPEVSP--GAELTLSLDPNAKGQFHNVTDGT--LFAEVDVVFPILHGPFGEDGTVQ 116 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRLG 188 GL EL+G+PYVG GVLAS+ GMDKEFTKK+ +AA LP+ P +L+ R L +E Q+LG Sbjct: 117 GLFELSGLPYVGPGVLASSVGMDKEFTKKVLAAADLPVAPEVILK-GRTELSEDEKQQLG 175 Query: 189 LPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVLEFPDG 248 LP +VKPA ++E PAA+ A D K++VE I G+E+E GVL + DG Sbjct: 176 LPVFVKPARGGSSIGVSKVTTWEEFPAAVDLALEDDEKILVEPEIVGKEVEIGVLHYADG 235 Query: 249 RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAIRAFEA 308 L AS +AG+ ++GFY F+TKYLD+ ++PA ++ + +R +AIRAFEA Sbjct: 236 TLLASV--PALLAGIDDSDEGFYGFDTKYLDNVVTAEIPAPFAPELTEKLRDMAIRAFEA 293 Query: 309 IDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVETALSR 368 ++C+GL+RVDFF+T D INEINT+PGFT ISMYP++ AASGV+YP LL ++E AL++ Sbjct: 294 LNCEGLSRVDFFVTKDSVYINEINTLPGFTPISMYPQVLAASGVEYPALLEALIEQALAK 353 >tr|Q0RDM2|Q0RDM2_FRAAA Tax_Id=326424 (ddlA)SubName: Full=D-alanine-D-alanine ligase A; EC=6.3.2.4;[Frankia alni] Length = 367 Score = 361 bits (927), Expect = 7e-98 Identities = 199/375 (53%), Positives = 248/375 (66%), Gaps = 25/375 (6%) Query: 10 RLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAIT 69 R+R+A++FGGRS EHAISCVSAG +LR LDP ++V +GI P G WV PDA A+T Sbjct: 7 RIRLALLFGGRSTEHAISCVSAGGVLRALDPDVYDVALVGIDPSGRWVFM---PDAKALT 63 Query: 70 --DRRLPEVSSQSGTELALPADP---RW----GGQLVSLPPGAGEVLASVDVVFPVLHGP 120 D LP+V++ GT + L DP RW GG+ + P L VDVVFP+LHGP Sbjct: 64 PADGALPQVTASRGTSVVLAPDPTAARWYPRDGGESIQGP------LGDVDVVFPLLHGP 117 Query: 121 YGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD 180 +GEDGTIQGLLE+AGVPYVG+GV ASAA MDK+ K + AAGLP+GP+AV+R + Q+L Sbjct: 118 FGEDGTIQGLLEMAGVPYVGSGVFASAAAMDKQHMKSMLQAAGLPVGPYAVVR-AGQTLS 176 Query: 181 REELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 + RLGLP +VKPA + +L A+ AR +DPKV+VEAAI GRE+EC Sbjct: 177 EADQDRLGLPVFVKPARGGSSIGISRVDAWADLDTAVKTARANDPKVLVEAAITGREIEC 236 Query: 241 GVLEFPDG-RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVR 299 GVL DG +AS EI V GFYDFE KY+ D D+PA++ VR Sbjct: 237 GVLGRLDGPGAQASVPAEITVTSA----TGFYDFEAKYVSDQTRFDIPARLSPSALARVR 292 Query: 300 QLAIRAFEAIDCQGLARVDFFLT-DDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLL 358 Q+A+ AFEA+DC GLARVD F+T DD V+NE+NTMPGFT SM+PRMWAASG+ YP L+ Sbjct: 293 QVAVAAFEALDCAGLARVDVFVTPDDHVVVNEVNTMPGFTPTSMFPRMWAASGITYPDLV 352 Query: 359 ATMVETALSRGIGLR 373 +V AL G GLR Sbjct: 353 DRLVRLALRDGAGLR 367 >tr|A8L584|A8L584_FRASN Tax_Id=298653 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Frankia sp.] Length = 367 Score = 360 bits (925), Expect = 1e-97 Identities = 192/373 (51%), Positives = 248/373 (66%), Gaps = 9/373 (2%) Query: 3 GSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGN 62 G+S R R+R+ ++FGGRS EH+ISCVSAG +LR LD R++VI +GI +G W + + Sbjct: 2 GASTR--RVRLVLLFGGRSTEHSISCVSAGGVLRALDRSRYDVIPVGIDTEGRWAVLPDD 59 Query: 63 PDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYG 122 ALA LP V + +G + LP P +V P A L VDVVFP+LHGP+G Sbjct: 60 SPALAPVGTDLPIVDASAGLAVTLPPSPSAAPVVVHDPSAALRDLGPVDVVFPLLHGPFG 119 Query: 123 EDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDRE 182 EDGTIQGLLE+AG+PYVG+GV ASAA MDK+ K + +AAGLP+GP+AVLRP Q+L Sbjct: 120 EDGTIQGLLEMAGLPYVGSGVFASAAAMDKQHMKSMLAAAGLPVGPYAVLRPG-QALSEP 178 Query: 183 ELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGV 242 + +RLGLP +VKPA + +L A+ AR DPK +VEAA+ GRE+ECGV Sbjct: 179 DRERLGLPVFVKPARGGSSIGISRVDAWADLDTALKTARASDPKTLVEAAVVGREIECGV 238 Query: 243 LEFPDGR-LEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQL 301 L+ DG +AS E+ + GFYDFE KYL D A DVPA++ ++ + VR Sbjct: 239 LDSLDGSGPQASVPAEVTITS----SAGFYDFEAKYLSDGAVFDVPARLPGELTERVRAA 294 Query: 302 AIRAFEAIDCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLAT 360 A+ AFEA+DC GLARVD F+T G V+NE+NTMPGFT +SMYPRMWAASG+DY L+ Sbjct: 295 AVAAFEALDCAGLARVDMFVTPSGEIVLNEVNTMPGFTPMSMYPRMWAASGIDYAALVDR 354 Query: 361 MVETALSRGIGLR 373 +V+ AL G GLR Sbjct: 355 LVQLALRDGAGLR 367 >tr|C2AUC1|C2AUC1_TSUPA Tax_Id=521096 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Tsukamurella paurometabola DSM 20162] Length = 322 Score = 360 bits (924), Expect = 2e-97 Identities = 194/327 (59%), Positives = 230/327 (70%), Gaps = 8/327 (2%) Query: 48 IGITPQGSWVLTDGNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPP-GAGEV 106 +GIT GSWVL+D + +L DR LP V + T+LAL G +LVS+ AG V Sbjct: 3 VGITQSGSWVLSDADAQSLRFADRALPSVP-EGPTDLALLP----GAELVSVSSDAAGSV 57 Query: 107 LASVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPI 166 L SVDVVFPVLHGPYGEDGT+QGLLE+AGVPYVGAGVLASAAGMDKEF KKL +A GLP+ Sbjct: 58 LGSVDVVFPVLHGPYGEDGTLQGLLEMAGVPYVGAGVLASAAGMDKEFAKKLLAADGLPV 117 Query: 167 GPHAVLRPSRQSLDREELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPK 226 G VLR + E L RLGLP +VKPA LPAAIA ARR DPK Sbjct: 118 GDFHVLRQRETEVPPEVLHRLGLPLFVKPARGGSSIGITRVTDLAALPAAIAEARRWDPK 177 Query: 227 VIVEAAINGRELECGVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDV 286 VI+EAA+ GRE+E GVLE PDG + AS + EI +A E FYDFETKYLDD A+ V Sbjct: 178 VIIEAAVIGREVEIGVLERPDGTVHASAIAEIEMAA--DAEHAFYDFETKYLDDRAQYTV 235 Query: 287 PAKVEDDVADAVRQLAIRAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRM 346 PA + ++ A+ +LA+RAF A D QGLARVDFF T +GPVINE+NTMPGFT+ SMYPRM Sbjct: 236 PADLTEEQTSAIAELAVRAFHAFDGQGLARVDFFQTAEGPVINEVNTMPGFTSTSMYPRM 295 Query: 347 WAASGVDYPTLLATMVETALSRGIGLR 373 WA SG+ Y LL+ +++TAL+RG GLR Sbjct: 296 WAESGIGYAELLSLLIDTALARGTGLR 322 >tr|C9N9U2|C9N9U2_9ACTO Tax_Id=591167 SubName: Full=D-alanine/D-alanine ligase; EC=6.3.2.4;[Streptomyces flavogriseus ATCC 33331] Length = 394 Score = 359 bits (922), Expect = 3e-97 Identities = 198/381 (51%), Positives = 248/381 (65%), Gaps = 18/381 (4%) Query: 5 SRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPD 64 S G + RVAVVFGGRS+EH IS V+AG+++ LD ++ V+ IGIT G WVLT +P Sbjct: 20 SEPGRKPRVAVVFGGRSSEHGISVVTAGAVMSALDRTKYNVLPIGITRDGRWVLTSDDPA 79 Query: 65 ALAITDRRLPEVSSQSGTE---LALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPY 121 +AITDR++P+V +G+ +AL DP +V P EVL VDVVFPVLHGPY Sbjct: 80 RMAITDRQVPDVDQLAGSARGAVALSVDPGNRDVVVGEPGSVPEVLGEVDVVFPVLHGPY 139 Query: 122 GEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDR 181 GEDGT+QG LEL+GVPYVGAGVL+SA G DKE+ K+++ + GLP+GP+ V+RP DR Sbjct: 140 GEDGTLQGFLELSGVPYVGAGVLSSAVGQDKEYMKRVFVSFGLPVGPYEVVRPREWDTDR 199 Query: 182 EELQRL--------GLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAI 233 ++ G P +VKPA L AI ARRHDPK +VE+ + Sbjct: 200 PAARKRVMEFAAEHGWPLFVKPARGGSSMGITKVDDAAGLDEAIEEARRHDPKFLVESLL 259 Query: 234 NGRELECGVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDD 293 +GRE+ECGVLEF DG AS EI FYDFE KY+D AA L VPA + D+ Sbjct: 260 SGREIECGVLEFEDGP-RASVPAEIPPVTAH----DFYDFEAKYIDSAAGL-VPAPLTDE 313 Query: 294 VADAVRQLAIRAFEAIDCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGV 352 V++LA+ AFEA C+GL R DFFLTDDG VINEINTMPGFT ISM+PRMW ASGV Sbjct: 314 QTAEVQRLAVEAFEAASCEGLVRADFFLTDDGSFVINEINTMPGFTPISMFPRMWQASGV 373 Query: 353 DYPTLLATMVETALSRGIGLR 373 +YP L+ ++ AL+R GLR Sbjct: 374 EYPELVDRLITAALNRSTGLR 394 >tr|C1UIF5|C1UIF5_9ACTO Tax_Id=526225 SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4;[Geodermatophilus obscurus DSM 43160] Length = 384 Score = 355 bits (912), Expect = 4e-96 Identities = 203/377 (53%), Positives = 250/377 (66%), Gaps = 22/377 (5%) Query: 5 SRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPD 64 S + +LR+AVVFGGRS EH+ISCVSAG++L LDP R++V+ +GI G WVL + Sbjct: 2 SGQAGKLRIAVVFGGRSAEHSISCVSAGAVLAGLDPDRYDVVPVGIARDGRWVLAEP-AQ 60 Query: 65 ALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAG--EVLASVDVVFPVLHGPYG 122 LAI D LPEV+ GT ++L DP G L L P AG L VDVVFPVLHG YG Sbjct: 61 RLAIADGELPEVTG--GTAVSLVGDPGGRG-LAVLEPAAGVASALTEVDVVFPVLHGAYG 117 Query: 123 EDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQS---- 178 EDGTIQGLLE++G+PYVG+GV ASAA MDKEFTKKL +AAGLP G H VLR + + Sbjct: 118 EDGTIQGLLEMSGIPYVGSGVFASAASMDKEFTKKLLAAAGLPQGVHVVLRDASGAVSAD 177 Query: 179 ---LDREELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAING 235 LD + +RLGLP +VKP + + P A+A A DPKVIVEAA+ G Sbjct: 178 PGVLDDADRERLGLPVFVKPCRAGSSIGITKVTDWAQFPEAVATAASVDPKVIVEAAVPG 237 Query: 236 RELECGVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVA 295 RE+ECGVL PDG +AS EIR+ G E +YDF KYLDDA + DVPA + + Sbjct: 238 REVECGVLARPDGPPQASLPAEIRLR--PGTE--WYDFAAKYLDDAVDFDVPADLTPEQT 293 Query: 296 DAVRQLAIRAFEAIDCQGLARVDFFLTD-----DGPVINEINTMPGFTTISMYPRMWAAS 350 V++ A +AF A+DC+GLARVDFFL D V+NE+NTMPGFT ISMYPRMWAA+ Sbjct: 294 RLVQETARKAFLALDCRGLARVDFFLGTGPDGADRLVVNEVNTMPGFTPISMYPRMWAAT 353 Query: 351 GVDYPTLLATMVETALS 367 GVD+ L+ +VE AL+ Sbjct: 354 GVDFAALVDRLVEVALA 370 >sp|Q2J6Y1|DDL_FRASC Tax_Id=106370 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Frankia sp.] Length = 383 Score = 353 bits (906), Expect = 2e-95 Identities = 198/391 (50%), Positives = 248/391 (63%), Gaps = 26/391 (6%) Query: 1 VSGSSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTD 60 ++GS RR +R+A++FGGRS EHAISC+SA +LR LD ++V+ +GI G WV+ Sbjct: 1 MAGSRRR---IRLALLFGGRSTEHAISCISASGVLRALDRDVYDVVPVGIDTHGRWVVLP 57 Query: 61 GNPDALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPG----------------AG 104 +P ALA+T RLP V + G + L ADP G L P G + Sbjct: 58 DDPTALAVTGDRLPAVVAAHGESVVLAADPTTPGLLPCRPRGGLDSVRNTLGSSDALGSS 117 Query: 105 EVLASVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGL 164 ++ +DVVFP+LHGP+GEDGT+QGLLE+AG+PYVG+GV ASAA MDK+ K L AAGL Sbjct: 118 DIPGDIDVVFPLLHGPFGEDGTVQGLLEMAGLPYVGSGVFASAAAMDKQHMKALLRAAGL 177 Query: 165 PIGPHAVLRPSRQSLDREELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHD 224 P+G +AVLR + +L + +RLGLP +VKPA + +L AI AAR D Sbjct: 178 PVGSYAVLR-AGDTLTGADQERLGLPVFVKPARGGSSIGISRVEAWADLDTAIKAARASD 236 Query: 225 PKVIVEAAINGRELECGVLEFPDG-RLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAE 283 PKV+VE+AI GRE+ECGVL DG EAS EI V GFYDFE KY+ DA Sbjct: 237 PKVLVESAIVGREIECGVLGILDGPGAEASVPAEITVTS----SAGFYDFEAKYMSDATH 292 Query: 284 LDVPAKVEDDVADAVRQLAIRAFEAIDCQGLARVDFFLT-DDGPVINEINTMPGFTTISM 342 DVPA + V + VR AI AFEA+DC GLARVD F+T DD +INE+NTMPGFT SM Sbjct: 293 FDVPANLSHAVREEVRGAAIAAFEALDCAGLARVDMFVTADDHVIINEVNTMPGFTPTSM 352 Query: 343 YPRMWAASGVDYPTLLATMVETALSRGIGLR 373 +PRMW ASGV YP L+ +V AL G GLR Sbjct: 353 FPRMWEASGVTYPQLVDRLVRLALRDGAGLR 383 >sp|Q6NHK6|DDL_CORDI Tax_Id=1717 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Corynebacterium diphtheriae] Length = 365 Score = 353 bits (906), Expect = 2e-95 Identities = 183/365 (50%), Positives = 248/365 (67%), Gaps = 8/365 (2%) Query: 4 SSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNP 63 +S R++VA+++GGRS+EH++SCVSAG+I+ +LDP+R+EV +GIT G W + + +P Sbjct: 9 NSSETPRIKVAIIYGGRSSEHSVSCVSAGAIMAHLDPQRYEVFPVGITHDGVWTVGESDP 68 Query: 64 DALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGE 123 L DR +PEV Q E++L +P G+L G + A VDVVFPVLHG +GE Sbjct: 69 SRLKTVDRVMPEV--QFTREVSLSVNPTTAGELCFED---GSLYAKVDVVFPVLHGRFGE 123 Query: 124 DGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREE 183 DGTIQGL EL+GVPYVG GVL+SA GMDKEFTKKL +A GLP+G +LR S ++L E Sbjct: 124 DGTIQGLFELSGVPYVGTGVLSSACGMDKEFTKKLMAAEGLPVGKEVILRGS-ETLTEEH 182 Query: 184 LQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVL 243 + LGLP +VKPA + E AA++ AR HD KVIVEA I G E+ECGVL Sbjct: 183 KRELGLPVFVKPARGGSSIGISRVADWSEWDAALSLAREHDSKVIVEAEIVGVEVECGVL 242 Query: 244 EFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAI 303 E DG L AS +++ ++GFY F+TKYLDD +PA + + +++L++ Sbjct: 243 ERIDGSLMASVPAQLQ--DTDEGDEGFYGFDTKYLDDVVTAHIPAPFDAETTALIQELSL 300 Query: 304 RAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVE 363 +AF A+ C+GLARVDFF+TD GPV+NEINTMPGFT ISMYP+++ A+G+ Y LL ++E Sbjct: 301 KAFTALSCRGLARVDFFVTDHGPVLNEINTMPGFTPISMYPQVFEATGIGYAQLLDNLIE 360 Query: 364 TALSR 368 AL + Sbjct: 361 QALHK 365 >sp|Q82JS5|DDL_STRAW Tax_Id=33903 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Streptomyces avermitilis] Length = 385 Score = 353 bits (905), Expect = 3e-95 Identities = 193/374 (51%), Positives = 241/374 (64%), Gaps = 18/374 (4%) Query: 12 RVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAITDR 71 RVAVVFGGRS+EH IS V+AG++LR +D +++V+ IGIT G W LT P+ +AITDR Sbjct: 18 RVAVVFGGRSSEHGISVVTAGAVLRAIDRTKYDVLPIGITRDGRWALTADEPERMAITDR 77 Query: 72 RLPEVSSQSGTE---LALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 R P V + + + LP DP + S P + L VDVVFPVLHGPYGEDGT+Q Sbjct: 78 RTPSVEELAESNEGGVILPVDPANREVVYSEPGSVPKALGEVDVVFPVLHGPYGEDGTLQ 137 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREELQRL- 187 GLLEL+GVPYVGAGVLASA G DKE+ K+++++ GL +GP+ V+RP D +R Sbjct: 138 GLLELSGVPYVGAGVLASAVGQDKEYMKRVFTSFGLKVGPYVVIRPREWERDESAARRKI 197 Query: 188 -------GLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 G P +VKPA L A+A A+RHDPK+IVEA + GRE+EC Sbjct: 198 VDFAGEHGWPLFVKPARAGSSIGITKVDDLAGLDEAVAEAQRHDPKIIVEALLRGREIEC 257 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLEF DG AS EI A + +YDFE KY+D + VPA + + VR+ Sbjct: 258 GVLEFEDGP-RASVPAEIPPA----QSHAYYDFEAKYIDSTPGI-VPAPLTPEETAEVRR 311 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLA 359 LA+ AFEA C+GL R DFFLT+DG VINEINTMPGFT ISMYP+MW ASG+ YP L+ Sbjct: 312 LAVEAFEATSCEGLVRADFFLTEDGDFVINEINTMPGFTPISMYPQMWQASGIAYPELVD 371 Query: 360 TMVETALSRGIGLR 373 +VE AL R GLR Sbjct: 372 RLVEAALRRSTGLR 385 >tr|C7QH14|C7QH14_CATAD Tax_Id=479433 SubName: Full=D-alanine/D-alanine ligase; EC=6.3.2.4;[Catenulispora acidiphila] Length = 394 Score = 352 bits (904), Expect = 3e-95 Identities = 198/390 (50%), Positives = 251/390 (64%), Gaps = 29/390 (7%) Query: 9 ERLRVAVVFGGRSNEHAISCVSAGSILRNL----DPRRFEVIAIGITPQGSWVLTD---G 61 +R+RVAVVFGGRS+EHAISCV+AGS+L L +P+R+E++ IGI G WVL D G Sbjct: 9 KRIRVAVVFGGRSSEHAISCVTAGSVLDALRNGPEPQRYEIVPIGIASDGRWVLADLPDG 68 Query: 62 NPDALAITDRRLPEVSSQSGTELA----LPADPRWGGQLVSLPPGAGEVLASVDVVFPVL 117 LAITD RLPE+ + E A + DP V P + L VDVV P+L Sbjct: 69 GDLNLAITDGRLPEIGLPASAERANLVTMAGDPTARELTVHEPGAVPKSLGEVDVVLPLL 128 Query: 118 HGPYGEDGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRP--- 174 HGPYGEDGT+QGLLELAGVPYVG+GVLASA MDKEF K+L + AG +GP+ V+RP Sbjct: 129 HGPYGEDGTLQGLLELAGVPYVGSGVLASAVSMDKEFMKRLLAQAGFEVGPYEVVRPRDW 188 Query: 175 ---SRQSLDREELQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEA 231 ++ R ++ LG P +VKPA +EL AI AARRHDPKV+VEA Sbjct: 189 GTEEGRAAVRLAVEELGYPVFVKPARAGSSMGITKVDAPEELDQAIDAARRHDPKVLVEA 248 Query: 232 AINGRELECGVLE--FPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAK 289 AI GRE+ECGVLE P EAS E+RV G FYDF+ KYLD + E+D+PA+ Sbjct: 249 AIEGREIECGVLEGAGPQDPAEASLPAELRVTG----PHAFYDFQAKYLDGSTEVDIPAR 304 Query: 290 VEDDVADAVRQLAIRAFEAIDCQGLARVDFFL---TDDGP---VINEINTMPGFTTISMY 343 + + + +R A+ FE + C+GLARVDFF D GP ++NEINTMPGFT SM+ Sbjct: 305 LSAEEIEDIRGQAVGVFETLGCEGLARVDFFYQESADGGPGRFIVNEINTMPGFTPTSMF 364 Query: 344 PRMWAASGVDYPTLLATMVETALSRGIGLR 373 P+MW A+G+ YP L+A +++TAL R GLR Sbjct: 365 PQMWQAAGLSYPELIARLIDTALLRPAGLR 394 >sp|B1VYZ5|DDL_STRGG Tax_Id=455632 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Streptomyces griseus subsp. griseus] Length = 391 Score = 352 bits (903), Expect = 4e-95 Identities = 192/374 (51%), Positives = 245/374 (65%), Gaps = 18/374 (4%) Query: 12 RVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNPDALAITDR 71 RVAVVFGGRS+EH IS V+AG+++R +D ++V+ IGIT G W LT P+ +AITDR Sbjct: 24 RVAVVFGGRSSEHGISVVTAGAVMRAIDRTTYDVLPIGITTDGRWALTADEPERMAITDR 83 Query: 72 RLPEV---SSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGEDGTIQ 128 ++P+V + + + L DP + + P + L VDVVFPVLHGPYGEDGT+Q Sbjct: 84 KVPDVDRLTESAEGSVVLSVDPGSREVVYTEPGSVPKALGEVDVVFPVLHGPYGEDGTLQ 143 Query: 129 GLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLD----REEL 184 GLLEL+GVPYVGAGVLASA G DKE+ K+++ + GLP+GP+ V+RP D RE + Sbjct: 144 GLLELSGVPYVGAGVLASAVGQDKEYMKRVFLSFGLPVGPYEVVRPREWDNDPAAARERI 203 Query: 185 QRL----GLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELEC 240 G P ++KPA + L AAI ARRHDPK +VE+ + GRE+EC Sbjct: 204 VDFAGEHGWPLFIKPARGGSSMGITKVDSVEGLDAAIEEARRHDPKFLVESLLRGREIEC 263 Query: 241 GVLEFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQ 300 GVLEF DG AS EI FYDFE KY+D AA L VPA + ++ VR+ Sbjct: 264 GVLEFEDGP-RASVPAEIPPV----TSHDFYDFEAKYIDSAAGL-VPAPLTEEQTAEVRR 317 Query: 301 LAIRAFEAIDCQGLARVDFFLTDDGP-VINEINTMPGFTTISMYPRMWAASGVDYPTLLA 359 LA+ AF+A+ C+GL R DFFLT+DG VINEINT+PGFT ISMYPRMW SGVDYP L+ Sbjct: 318 LAVAAFDAVSCEGLVRADFFLTEDGTFVINEINTLPGFTPISMYPRMWQESGVDYPELVD 377 Query: 360 TMVETALSRGIGLR 373 +++ ALSR GLR Sbjct: 378 RLIQAALSRSTGLR 391 >sp|A4QDT4|DDL_CORGB Tax_Id=340322 (ddl)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-alanylalanine synthetase; AltName: Full=D-Ala-D-Ala ligase;[Corynebacterium glutamicum] Length = 360 Score = 351 bits (900), Expect = 1e-94 Identities = 179/365 (49%), Positives = 246/365 (67%), Gaps = 8/365 (2%) Query: 4 SSRRGERLRVAVVFGGRSNEHAISCVSAGSILRNLDPRRFEVIAIGITPQGSWVLTDGNP 63 S+ ++RVAVV+GGRS+EH++SCVSAG+I+ +LDP +++VI +GIT G+WV+ + +P Sbjct: 2 SNSNSGKVRVAVVYGGRSSEHSVSCVSAGAIMAHLDPEKYDVIPVGITVDGAWVVGETDP 61 Query: 64 DALAITDRRLPEVSSQSGTELALPADPRWGGQLVSLPPGAGEVLASVDVVFPVLHGPYGE 123 L + DR +PEV + +L DP G+ G + A+ DV+FPVLHG +GE Sbjct: 62 QKLTLIDRTMPEVEHREEVRPSL--DPAHRGEFHF---SDGSLYATADVIFPVLHGRFGE 116 Query: 124 DGTIQGLLELAGVPYVGAGVLASAAGMDKEFTKKLWSAAGLPIGPHAVLRPSRQSLDREE 183 DGT+QGL L+ +P VG GVLASAAGMDKE+TKKL +A GLPIG +LR R L E Sbjct: 117 DGTVQGLFALSDIPVVGPGVLASAAGMDKEYTKKLMAAEGLPIGREVILR-DRTELTEAE 175 Query: 184 LQRLGLPAYVKPAXXXXXXXXXXXXXFDELPAAIAAARRHDPKVIVEAAINGRELECGVL 243 LGLP +VKPA +++ A+ AR HD KVIVE+ I G E+ECGVL Sbjct: 176 KNLLGLPVFVKPARGGSSIGISRVTAWEDFNKAVGLARAHDEKVIVESEIVGSEVECGVL 235 Query: 244 EFPDGRLEASTLGEIRVAGVRGREDGFYDFETKYLDDAAELDVPAKVEDDVADAVRQLAI 303 ++PDGR+ AS ++G GFYDF+TKYLD+ ++PA +++ + ++ LA+ Sbjct: 236 QYPDGRIVASV--PALLSGTESGAGGFYDFDTKYLDNVVTAEIPAPLDEKTTELIQSLAV 293 Query: 304 RAFEAIDCQGLARVDFFLTDDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMVE 363 +F+A+ C+GLARVDFF+T +GPV+NEINTMPGFT ISMYP+M+ ASGV Y LL +V+ Sbjct: 294 ESFQALACEGLARVDFFVTANGPVLNEINTMPGFTPISMYPQMFTASGVAYEELLDVLVQ 353 Query: 364 TALSR 368 AL R Sbjct: 354 QALHR 358 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.138 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,807,544,160 Number of extensions: 121024956 Number of successful extensions: 288786 Number of sequences better than 10.0: 3591 Number of HSP's gapped: 282816 Number of HSP's successfully gapped: 3696 Length of query: 373 Length of database: 3,846,993,858 Length adjustment: 139 Effective length of query: 234 Effective length of database: 2,279,740,641 Effective search space: 533459309994 Effective search space used: 533459309994 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.8 bits)