BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_1796
         (200 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HJK9|B2HJK9_MYCMM Tax_Id=216594 SubName: Full=Transcription...   365   1e-99
tr|A0PQ60|A0PQ60_MYCUA Tax_Id=362242 SubName: Full=Transcription...   360   6e-98
sp|P67441|Y2936_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ...   320   6e-86
sp|P67440|Y2912_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ...   320   6e-86
tr|C6DWE2|C6DWE2_MYCTK Tax_Id=478434 SubName: Full=Transcription...   320   6e-86
tr|C1AG27|C1AG27_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   320   6e-86
tr|A5U6R7|A5U6R7_MYCTA Tax_Id=419947 SubName: Full=TetR-family t...   320   6e-86
tr|A1KMQ6|A1KMQ6_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   320   6e-86
tr|A5WRG4|A5WRG4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   320   6e-86
tr|A2VLP1|A2VLP1_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   320   6e-86
tr|A4KKH4|A4KKH4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   317   6e-85
tr|A0QJ51|A0QJ51_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   281   3e-74
tr|Q73VN3|Q73VN3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   277   5e-73
tr|A0R5C3|A0R5C3_MYCS2 Tax_Id=246196 SubName: Full=Putative HTH-...   246   1e-63
tr|B1MHV6|B1MHV6_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-...   163   1e-38
tr|Q1CX53|Q1CX53_MYXXD Tax_Id=246197 SubName: Full=Transcription...   105   4e-21
tr|Q7NSJ9|Q7NSJ9_CHRVO Tax_Id=536 SubName: Full=Putative unchara...    83   2e-14
tr|D1ABA4|D1ABA4_THECU Tax_Id=471852 SubName: Full=Transcription...    75   3e-12
tr|Q5YNE6|Q5YNE6_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    75   5e-12
tr|Q1DG61|Q1DG61_MYXXD Tax_Id=246197 SubName: Full=Transcription...    75   5e-12
tr|Q5YY05|Q5YY05_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    74   7e-12
tr|Q5LVW9|Q5LVW9_SILPO Tax_Id=89184 SubName: Full=Transcriptiona...    74   1e-11
tr|A4FEP4|A4FEP4_SACEN Tax_Id=405948 SubName: Full=TetR-family t...    73   2e-11
tr|D0D701|D0D701_9RHOB Tax_Id=501479 SubName: Full=Transcription...    72   3e-11
tr|C1WKS3|C1WKS3_9ACTO Tax_Id=479435 SubName: Full=Transcription...    71   8e-11
tr|A4XEM8|A4XEM8_NOVAD Tax_Id=279238 SubName: Full=Transcription...    70   1e-10
tr|B1MFS6|B1MFS6_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...    70   2e-10
tr|A3SK33|A3SK33_9RHOB Tax_Id=89187 SubName: Full=Putative trans...    69   3e-10
tr|A1SQG9|A1SQG9_NOCSJ Tax_Id=196162 SubName: Full=Transcription...    68   5e-10
tr|A8M8J8|A8M8J8_SALAI Tax_Id=391037 SubName: Full=Transcription...    68   6e-10
tr|D0L5H8|D0L5H8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...    68   6e-10
tr|Q5Z1B9|Q5Z1B9_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    67   8e-10
tr|C0ZN87|C0ZN87_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...    67   1e-09
tr|C3JP04|C3JP04_RHOER Tax_Id=596309 SubName: Full=Transcription...    67   1e-09
tr|C7MZ98|C7MZ98_SACVD Tax_Id=471857 SubName: Full=Transcription...    66   2e-09
tr|C1B9V6|C1B9V6_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    66   2e-09
tr|C4RE69|C4RE69_9ACTO Tax_Id=219305 SubName: Full=TetR family t...    66   2e-09
tr|Q0S8P2|Q0S8P2_RHOSR Tax_Id=101510 SubName: Full=Probable tran...    65   3e-09
tr|B1MCQ9|B1MCQ9_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR...    65   3e-09
tr|B0U9S2|B0U9S2_METS4 Tax_Id=426117 SubName: Full=Transcription...    65   4e-09
tr|Q2CJA5|Q2CJA5_9RHOB Tax_Id=314256 SubName: Full=Putative tran...    65   4e-09
tr|B8INL6|B8INL6_METNO Tax_Id=460265 SubName: Full=Transcription...    65   5e-09
tr|Q0FXA3|Q0FXA3_9RHOB Tax_Id=314265 SubName: Full=Transcription...    65   5e-09
tr|C7MT51|C7MT51_SACVD Tax_Id=471857 SubName: Full=Transcription...    64   7e-09
tr|C5D0B5|C5D0B5_VARPS Tax_Id=543728 SubName: Full=Transcription...    64   7e-09
tr|A4XCU4|A4XCU4_SALTO Tax_Id=369723 SubName: Full=Transcription...    64   9e-09
tr|D0L373|D0L373_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...    63   2e-08
tr|A0Y7W0|A0Y7W0_9GAMM Tax_Id=247633 SubName: Full=Transcription...    63   2e-08
tr|C6WCP1|C6WCP1_ACTMD Tax_Id=446462 SubName: Full=Transcription...    63   2e-08
tr|B6VRQ6|B6VRQ6_STRGD Tax_Id=45398 (rphA3)SubName: Full=Putativ...    62   4e-08

>tr|B2HJK9|B2HJK9_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein (Probably TetR-family);[Mycobacterium
           marinum]
          Length = 200

 Score =  365 bits (937), Expect = 1e-99
 Identities = 192/200 (96%), Positives = 192/200 (96%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL
Sbjct: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID
Sbjct: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180

Query: 181 EQRIPVXXXXXXXXVPDTAP 200
           EQRIPV        VPDTAP
Sbjct: 181 EQRIPVLAALLSAAVPDTAP 200


>tr|A0PQ60|A0PQ60_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein (Probably TetR-family);[Mycobacterium
           ulcerans]
          Length = 200

 Score =  360 bits (923), Expect = 6e-98
 Identities = 190/200 (95%), Positives = 190/200 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTIV VGYARASAAIITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIVGVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL
Sbjct: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQHVLGQYRAKIYDAARTLPGAEGFPE TFPAIVAVLTNVFDGAAIVGAVLPQPDID
Sbjct: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEGTFPAIVAVLTNVFDGAAIVGAVLPQPDID 180

Query: 181 EQRIPVXXXXXXXXVPDTAP 200
           EQRIPV        VPDTAP
Sbjct: 181 EQRIPVLAALLSAAVPDTAP 200


>sp|P67441|Y2936_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Mb2936c;[Mycobacterium bovis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>sp|P67440|Y2912_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Rv2912c/MT2980;[Mycobacterium tuberculosis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|C6DWE2|C6DWE2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator, tetR-family;[Mycobacterium tuberculosis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|C1AG27|C1AG27_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A5U6R7|A5U6R7_MYCTA Tax_Id=419947 SubName: Full=TetR-family
           transcriptional regulator;[Mycobacterium tuberculosis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A1KMQ6|A1KMQ6_MYCBP Tax_Id=410289 SubName: Full=Probable
           transcriptional regulatory protein (Probably
           tetR-family);[Mycobacterium bovis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A5WRG4|A5WRG4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein,
           tetR-family;[Mycobacterium tuberculosis]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A2VLP1|A2VLP1_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 195

 Score =  320 bits (820), Expect = 6e-86
 Identities = 163/186 (87%), Positives = 177/186 (95%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADRPAL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRPALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A4KKH4|A4KKH4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein (Probably
           tetR-family);[Mycobacterium tuberculosis str. Haarlem]
          Length = 195

 Score =  317 bits (811), Expect = 6e-85
 Identities = 162/186 (87%), Positives = 176/186 (94%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLLQASIDTI+EVGYARASAA+ITKRAGVSVGALFRHFETMGDFMA
Sbjct: 1   MARTQQQRREETVARLLQASIDTIIEVGYARASAAVITKRAGVSVGALFRHFETMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATAYEVLRRQL+ FTKQVAEIPADR AL AAL ILRDITAG+TNAVLYELM+AARTD+KL
Sbjct: 61  ATAYEVLRRQLETFTKQVAEIPADRRALPAALTILRDITAGSTNAVLYELMVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           KETLQ+VLGQY AKI+DAAR LPGAE FPEETFP IVA++TNVFDGAAIV  VLPQP+++
Sbjct: 121 KETLQNVLGQYSAKIHDAARALPGAESFPEETFPVIVALMTNVFDGAAIVRGVLPQPELE 180

Query: 181 EQRIPV 186
           EQRIP+
Sbjct: 181 EQRIPM 186


>tr|A0QJ51|A0QJ51_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 197

 Score =  281 bits (719), Expect = 3e-74
 Identities = 142/186 (76%), Positives = 162/186 (87%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLL ASI TI+EVGYARASAA+ITKRAGVSVGALFRHF+TMGDFMA
Sbjct: 1   MARTQQQRREETVARLLDASIATIIEVGYARASAAVITKRAGVSVGALFRHFDTMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATA EVLRRQL+ FTK+VAEIPAD+P LEA L ILRD+T+G  NAV+YEL +AARTD+KL
Sbjct: 61  ATASEVLRRQLESFTKRVAEIPADQPVLEAVLGILRDLTSGPVNAVIYELTVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           +ETLQH L QY AKI + +R LPG EGFP +TFP +VA++ NVFDGAA+V  VLPQP+I 
Sbjct: 121 RETLQHELAQYAAKIDEVSRALPGVEGFPADTFPVLVALMRNVFDGAAVVEGVLPQPEIA 180

Query: 181 EQRIPV 186
            QRIPV
Sbjct: 181 AQRIPV 186


>tr|Q73VN3|Q73VN3_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 197

 Score =  277 bits (708), Expect = 5e-73
 Identities = 139/186 (74%), Positives = 161/186 (86%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLL ASI TI+EVGYARASAA+ITKRAGVSVGALFRHF+TMGDFMA
Sbjct: 1   MARTQQQRREETVARLLDASIATIIEVGYARASAAVITKRAGVSVGALFRHFDTMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATA EVLRRQL+ FTK+VA+IPAD+P LE  L ILRD+T+G  NAV+YEL +AARTD+KL
Sbjct: 61  ATASEVLRRQLESFTKRVADIPADQPVLEVVLGILRDLTSGPVNAVIYELTVAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
           +ETLQH L QY AKI + +R LPG EGFP +TFP +VA++ NVFDGAA+V  VLPQP+I 
Sbjct: 121 RETLQHELAQYAAKIDEVSRALPGVEGFPADTFPVLVALMRNVFDGAAVVEGVLPQPEIA 180

Query: 181 EQRIPV 186
            +RIPV
Sbjct: 181 ARRIPV 186


>tr|A0R5C3|A0R5C3_MYCS2 Tax_Id=246196 SubName: Full=Putative
           HTH-type transcriptional regulator;[Mycobacterium
           smegmatis]
          Length = 197

 Score =  246 bits (628), Expect = 1e-63
 Identities = 126/188 (67%), Positives = 152/188 (80%), Gaps = 4/188 (2%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           MARTQQQRREETVARLL ASI TI++VGYARASAA+I +RA VS GALFRHF TMGDFMA
Sbjct: 1   MARTQQQRREETVARLLDASIQTIIDVGYARASAAVIARRAQVSDGALFRHFPTMGDFMA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
           ATA+EV+RRQL++FTK++AEIPA+ P L+A L ILRD+T   TN V+YEL+IAARTD+KL
Sbjct: 61  ATAHEVMRRQLEVFTKRIAEIPAEEPPLQAVLTILRDVTGNDTNTVMYELLIAARTDEKL 120

Query: 121 KETLQHVLGQYRAKIYDAARTLPGAEGFPE----ETFPAIVAVLTNVFDGAAIVGAVLPQ 176
           + TLQ VL +Y A IY+ ART+PG E FP+        A VA+L N FDGAAI+  VLPQ
Sbjct: 121 RVTLQEVLTEYAANIYETARTIPGFEQFPQNESRHEAMAAVALLVNTFDGAAIIRPVLPQ 180

Query: 177 PDIDEQRI 184
           PD+++ RI
Sbjct: 181 PDLEDARI 188


>tr|B1MHV6|B1MHV6_MYCA9 Tax_Id=561007 SubName: Full=Putative
           HTH-type transcriptional regulator;[Mycobacterium
           abscessus]
          Length = 204

 Score =  163 bits (412), Expect = 1e-38
 Identities = 84/176 (47%), Positives = 116/176 (65%)

Query: 4   TQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATA 63
           TQ +RRE T+ARLL + IDTI E+GY+RAS   I KRAG+S GALFRHF T+GDFMA  A
Sbjct: 10  TQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPTVGDFMAEVA 69

Query: 64  YEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKET 123
            E LRRQL     Q           E  +A++R +     NAVLYELM+AARTD++L+ET
Sbjct: 70  RETLRRQLATVRAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAARTDEQLRET 129

Query: 124 LQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDI 179
           LQ  + +Y A++ + AR++PG +   E     +V ++T++FDG A+V  + P P++
Sbjct: 130 LQVAVAEYGAQMVELARSVPGTDRLSESELITLVFMITDMFDGEALVQTLRPYPEL 185


>tr|Q1CX53|Q1CX53_MYXXD Tax_Id=246197 SubName: Full=Transcriptional
           regulator, TetR family;[Myxococcus xanthus]
          Length = 221

 Score =  105 bits (261), Expect = 4e-21
 Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 3/174 (1%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQQ+RRE T  +LL A+I+T+VE GYAR +   ++KRAG+S GALF HF+T  + +AA 
Sbjct: 17  RTQQERRETTRRKLLDATIETLVEQGYARLTTVEVSKRAGLSQGALFTHFDTKEELLAAA 76

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              +  R +  +   V   P+ R  + AA+ +L             EL +AARTD +L+ 
Sbjct: 77  VEHLFPRLIQDYLAGVGARPSGRDRIAAAVDMLWAAFQRPELQAAIELYVAARTDAELRV 136

Query: 123 TLQHVLGQYRAKIYDAARTL-PGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLP 175
            L  V G +R  ++  AR L P A   P+  F +IV +  +   GAA+ G+  P
Sbjct: 137 ALAAVDGPHRENLHRVARELFPEASEHPD--FDSIVELALDAVQGAAVGGSARP 188


>tr|Q7NSJ9|Q7NSJ9_CHRVO Tax_Id=536 SubName: Full=Putative
           uncharacterized protein;[Chromobacterium violaceum]
          Length = 216

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 2/182 (1%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQQ RRE T+ +L++A+I+ ++E GY   S  +I  RAGVS GALFRHF T  + M   
Sbjct: 5   RTQQSRRESTIGKLVEAAIECLMESGYHGTSVQLICGRAGVSQGALFRHFATKNELMQPV 64

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
             +V+    +      A++P      E  +A+++ +     + VL EL++AART   L++
Sbjct: 65  GRKVVDDIFESALGLAAQLPPGMSEEERIIALMKALVMSPRHIVLLELLMAARTTPDLRD 124

Query: 123 TLQHVLGQY-RAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDIDE 181
                   Y R +      +L          F  ++ ++T +  G A+   +   P+ D 
Sbjct: 125 IFLGSSSTYFRDRFVAMMASLFPRYAISTGFFATLLTMMTTM-HGMALYRTLAEHPEGDR 183

Query: 182 QR 183
            R
Sbjct: 184 MR 185


>tr|D1ABA4|D1ABA4_THECU Tax_Id=471852 SubName: Full=Transcriptional
           regulator, TetR family;[Thermomonospora curvata DSM
           43183]
          Length = 228

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 5/155 (3%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ++RR  T ARLL A+ + + ++G+A  S   +++RAGVS GA   H+ T    +AA 
Sbjct: 28  RTQEERRSATQARLLDATAEALADLGWAGLSTTEVSRRAGVSRGAQQHHYPTKMSLVAAA 87

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              +L R    + +  AE+P ++  +E AL +  ++        L EL +A RTD+ L++
Sbjct: 88  LEHLLSRLRAEYEQAYAELPEEQRNIEGALDLFWEMLRQPPAIALLELALAGRTDESLRD 147

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIV 157
               +  +    I +    L     FPE   P IV
Sbjct: 148 LSADLHERVIVIIKEVFHEL-----FPESLPPEIV 177


>tr|Q5YNE6|Q5YNE6_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 228

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           M  TQ +RR  T ARLL A++ ++VEVGYA  +   +  RAGV  G L  HF T    +A
Sbjct: 1   MPETQARRRARTRARLLDAAVASLVEVGYAGTTTLEVQNRAGVPRGTLQHHFPTKPALLA 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKL 120
                +  R+ +  + + A+IP     L AA+ +   + +G +     E  + ARTD  L
Sbjct: 61  GVVEHLAERRFEQLSTEFAQIPPGCDRLAAAVELTMGMLSGPSFLATLECWVGARTDPDL 120

Query: 121 KETL----QHVLGQYRAKIYDAARTLPGAEGFPEET-FPAIVAVLTNVFDG 166
           +       Q +L Q   ++ D  R       FP+++  P I      +  G
Sbjct: 121 RAAFLPLEQRLLEQMHLRVRDLFRA-----EFPDDSRVPTITEFTIEIMTG 166


>tr|Q1DG61|Q1DG61_MYXXD Tax_Id=246197 SubName: Full=Transcriptional
           regulator, TetR family;[Myxococcus xanthus]
          Length = 222

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 43/122 (35%), Positives = 67/122 (54%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           R +Q+R   T  RL++A+I  + E+G+A A+  +I +RAGVS GA   HF T  D +AA 
Sbjct: 23  RQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAERAGVSRGACQHHFPTRADLVAAA 82

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              V  +Q++   ++ A++PAD    EA L +L  I          +L +AA  D +L+ 
Sbjct: 83  VEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYLSPVFTAAVQLWVAAVADAELRA 142

Query: 123 TL 124
            L
Sbjct: 143 QL 144


>tr|Q5YY05|Q5YY05_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 221

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 1/167 (0%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ+QR  ET A+++ A+I+ ++EVGY   +  ++ KRAGV+ GAL  H+ +  D +A  
Sbjct: 19  RTQEQRSAETQAKVMDAAIECLLEVGYGETTTQMVAKRAGVTRGALLHHYPSREDLVAGA 78

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              +  ++ +   +  A +      +  AL +L  +  G       EL++A+RTD  L  
Sbjct: 79  VRYLAVKRTEEALRTFARLTQGESLIPDALDLLWALYQGPLFTAAIELLVASRTDPALAR 138

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAI 169
            ++ V     + I  AA +     G   E+F  +V    +   G  I
Sbjct: 139 QVEAVEEVVVSSI-KAAGSAMALSGISAESFNELVVTAMDAITGLLI 184


>tr|Q5LVW9|Q5LVW9_SILPO Tax_Id=89184 SubName: Full=Transcriptional
           regulator, TetR family;[Silicibacter pomeroyi]
          Length = 209

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 8/148 (5%)

Query: 4   TQQQRREE-TVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           TQQ RR   T A++++A+I  +  +GYA  + A I +RAGVS GA+  HF T    +AAT
Sbjct: 8   TQQDRRSRSTQAKVIRATITCLDRLGYAETTFARIQERAGVSRGAITHHFPTRQALVAAT 67

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
           A E+L R LD   ++ A+  +  P  +        +   A    + E+++A RTD +L  
Sbjct: 68  AMELLSRALDPVERRAAQAASPEPVRDLITRAWGQVVNAAGGRAMVEILVACRTDAELYR 127

Query: 123 TLQHVL----GQYRAKIYDAARTLPGAE 146
            L+  L     Q RA +   AR   GA+
Sbjct: 128 LLETRLHDWDHQSRASV---ARAYVGAD 152


>tr|A4FEP4|A4FEP4_SACEN Tax_Id=405948 SubName: Full=TetR-family
           transcriptional regulator;[Saccharopolyspora erythraea]
          Length = 207

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           R QQ R   T  RLL+A++D++ E G+   + +++ +RAGVS GA   HF T  D + A 
Sbjct: 8   RPQQDRSRATRRRLLEAAVDSLAEHGWTGTTVSVVAERAGVSRGAAQHHFPTREDLVTAA 67

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              V   ++    +Q+ ++P  +   E  + IL  +  G       +L +AA +D+ L+E
Sbjct: 68  VSHVTDARISEIQEQITKLPRGKGRTEGVVDILVRLYTGTVFRAALQLWVAASSDEALRE 127

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVG 171
            +  V  +   + +  A  L G     +E+ P +   +    D A  +G
Sbjct: 128 QVVPVEARVGREAHRLAVELLGV----DESVPGVRETVQATLDMARGLG 172


>tr|D0D701|D0D701_9RHOB Tax_Id=501479 SubName: Full=Transcriptional
           regulator, TetR family;[Citreicella sp. SE45]
          Length = 211

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 6/147 (4%)

Query: 6   QQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAYE 65
           Q R   T  +L++A++DTI +VGY +AS    ++RAGVS GAL  HF    D M A+   
Sbjct: 8   QARSVATREKLIEAALDTIFDVGYEKASTPEFSRRAGVSRGALLHHFPARSDIMVASMET 67

Query: 66  VLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETLQ 125
           +LR   D      A +  +   L+A +  L  + +G    +  E +  +RTDD+L+  + 
Sbjct: 68  LLRGGTDEIRDMAASVSRNEIGLDAFIDWLHQLFSGRFFYLAVEFINGSRTDDELRARMI 127

Query: 126 HVLGQYRAKIYDAARTLPGAEGFPEET 152
            V+ ++   + +  R      GF E T
Sbjct: 128 PVVREFHEALDEIWR------GFCEPT 148


>tr|C1WKS3|C1WKS3_9ACTO Tax_Id=479435 SubName: Full=Transcriptional
           regulator, TetR family;[Kribbella flavida DSM 17836]
          Length = 210

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 38/120 (31%), Positives = 61/120 (50%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ R   T  +LL+A+++++ +VGYA  + A++  RAGVS GA   HF T  D   A   
Sbjct: 18  QQDRSRVTRQKLLEAAVESLAQVGYAATTVAVVAARAGVSRGAAQHHFPTRADLFEAAVE 77

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
            +   +L     Q A +P      EA +++L D+  G        L +AA T++ L+  +
Sbjct: 78  YMTEVRLAEIRSQAAALPVGAGRTEAIVSMLADVYTGPLFRAALHLWVAASTEEPLRRQI 137


>tr|A4XEM8|A4XEM8_NOVAD Tax_Id=279238 SubName: Full=Transcriptional
           regulator, TetR family;[Novosphingobium aromaticivorans]
          Length = 224

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           R QQ++   T  ++L+A++D +VE GYA  + A + +RA VS GA+  HF T  D +AA 
Sbjct: 26  RWQQRKSARTREKMLEAAVDCLVEGGYAGLTTAQVAERAQVSRGAMHHHFATRMDLVAAV 85

Query: 63  AYEVLRRQLDIFTKQ-VAEIPADRPALEAALAILRDITAGATN--AVLYELMIAARTDDK 119
              +  +++ +F    +A +   R AL   LA      +  T   A   EL +AARTD +
Sbjct: 86  VEHIFYQRMRVFLDDYIAAMAQSRGALLIDLATDAHWRSVQTREYAAYLELAVAARTDHE 145

Query: 120 LKETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDI 179
           L    +       A+ YD   T    E FP+         L + F  A   G +L +P +
Sbjct: 146 LNAAFEPA-----ARRYDEVWTAEMIESFPQWQDQWQAMKLGSDFAIAVHSGLLLHRPVL 200

Query: 180 DEQRI 184
             +RI
Sbjct: 201 GPERI 205


>tr|B1MFS6|B1MFS6_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulator, TetR family;[Mycobacterium
           abscessus]
          Length = 203

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/119 (32%), Positives = 65/119 (54%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ++R     ARLL+A+ID +VE GY+  + + I  RAG + GAL  HF++  + MA +
Sbjct: 6   RTQEERSAAMRARLLEATIDCLVEFGYSGTTTSRIASRAGATRGALIHHFQSKSELMAES 65

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLK 121
              +  ++     +++  +      +E  L +L  I  G     + EL+IAART+  L+
Sbjct: 66  VRHLAFKRTQAVLEELMAMDQSADPIERYLDVLWRIHQGPLFIAVVELLIAARTEPDLR 124


>tr|A3SK33|A3SK33_9RHOB Tax_Id=89187 SubName: Full=Putative
           transcriptional regulator;[Roseovarius nubinhibens ISM]
          Length = 212

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ +R + T   L +A+I  ++EVGY+  +   I KRAGVS GA   H+    D + A 
Sbjct: 10  RTQTERSDRTRKLLHEATIALLMEVGYSNTTTLGIAKRAGVSRGAQTHHYPEKIDLIVAA 69

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAAL-AILRDITAGATNAVLYELMIAARTDDKLK 121
             ++     +   +Q A + A R +L+  L  +   +  G       E+++AAR D  L+
Sbjct: 70  TEDMFHAFAEGLAEQAALLRAGRLSLDEFLDRVWHRMLDGDWFYASLEIIVAARGDADLR 129

Query: 122 ETLQHVL----GQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQP 177
           + LQ  +    G++ A   +    + G++  P+     I+ ++ N+F G A+   + P  
Sbjct: 130 QRLQPAILSLHGRFEAIWRETFAPVSGSDAGPDADPAVILNIVMNMFRGMAVQAVLRPDK 189

Query: 178 DIDEQRIPV 186
              ++ + V
Sbjct: 190 TFLQEMLKV 198


>tr|A1SQG9|A1SQG9_NOCSJ Tax_Id=196162 SubName: Full=Transcriptional
           regulator, TetR family;[Nocardioides sp.]
          Length = 199

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 1   MARTQQQRREETV-ARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFM 59
           M R  Q+ R   + ARLL+A+++ +VE G+A  S  ++++RAGVS GA   HF T  D +
Sbjct: 1   MPRVPQEERTRLMRARLLEATVECLVERGFAGTSTTLVSERAGVSRGAQLHHFPTKNDLV 60

Query: 60  AATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDK 119
            A    +  ++          +PA R    A L +L D           EL +AARTD  
Sbjct: 61  VAAVEHLTEKRGAELAAAAVGLPAGRRRTRAVLQMLADHFTAPVFTAALELWVAARTDPA 120

Query: 120 L 120
           L
Sbjct: 121 L 121


>tr|A8M8J8|A8M8J8_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora arenicola]
          Length = 201

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 37/120 (30%), Positives = 61/120 (50%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ+R   T ARLL+A+++ +VE G++  +  ++  RAGVS GA   H+ T    + A   
Sbjct: 10  QQERSRATQARLLEATVECLVEHGWSGTTTTVVATRAGVSRGAQLHHYPTKAALVTAAVA 69

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
            +  R+ +    +   +PA    L+  + +L     G       EL +AARTD +L+  L
Sbjct: 70  HLAERRAEELRVEAEALPAGPRRLDRVVDLLAAAFTGPLFVAALELWVAARTDRELRAAL 129


>tr|D0L5H8|D0L5H8_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis]
          Length = 194

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 13/182 (7%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ QR   T  R+L A+I+++VEVGYAR +   + +RAGVS GAL   F T    + A 
Sbjct: 13  RTQAQRSAATRVRVLDATIESLVEVGYARTTTQEVNRRAGVSRGALLHQFPTRESLVVAA 72

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              ++ R++        E+ +     +  + IL +  +G       EL +AARTD  L+ 
Sbjct: 73  VGHLVERRM-------TELLSRPRTGDEDIEILVEAFSGPLFDAALELWVAARTDPVLRA 125

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDIDEQ 182
            +  +      K+ DA  T    E F +   P  + +   +  G A V A+L  P+ +  
Sbjct: 126 AMVPL----EQKVSDAIAT-GALELFGDRYSPGQIELSAELARGMA-VSAILRTPEANRD 179

Query: 183 RI 184
            I
Sbjct: 180 VI 181


>tr|Q5Z1B9|Q5Z1B9_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 206

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 39/125 (31%), Positives = 64/125 (51%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ+QR  E   RLL A+I+ +VE GYA  +   I +RAGV+ GA   HF +  D + A 
Sbjct: 10  RTQEQRSTEMRTRLLDATIECLVEYGYAGTTTPRIAERAGVTRGAQVHHFGSKNDLVIAA 69

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              + +R++    +++A++      + +AL  L ++          EL +A RT+  L  
Sbjct: 70  INHLAQRRVQAVLREMADLAPGADPVASALDFLWELHQDPLFTATVELWVAGRTEPVLAA 129

Query: 123 TLQHV 127
            +  V
Sbjct: 130 AMAEV 134


>tr|C0ZN87|C0ZN87_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 194

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDF-M 59
           ++RTQ +R      RLL A+++++VE+GYAR S   I +RAGVS G    HF T     +
Sbjct: 10  VSRTQAERTAAMRGRLLDAAVESLVELGYARTSTQEIARRAGVSRGTQLHHFPTKESLVV 69

Query: 60  AATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDK 119
           AA  Y V +R  +I T   AE+   R      L +L D  +G       EL +AARTD  
Sbjct: 70  AAVEYLVDKRLEEILT---AEVDRGR-----GLEVLADAFSGPLFYAALELWVAARTDPV 121

Query: 120 L 120
           L
Sbjct: 122 L 122


>tr|C3JP04|C3JP04_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, TetR family;[Rhodococcus erythropolis SK121]
          Length = 213

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDF-M 59
           ++RTQ +R      RLL A+++++VE+GYAR S   I +RAGVS G    HF T     +
Sbjct: 29  VSRTQAERTAAMRGRLLDAAVESLVELGYARTSTQEIARRAGVSRGTQLHHFPTKESLVV 88

Query: 60  AATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDK 119
           AA  Y V +R  +I T   AE+   R      L +L D  +G       EL +AARTD  
Sbjct: 89  AAVEYLVDKRLEEILT---AEVDRGR-----GLEVLADAFSGPLFYAALELWVAARTDPV 140

Query: 120 L 120
           L
Sbjct: 141 L 141


>tr|C7MZ98|C7MZ98_SACVD Tax_Id=471857 SubName: Full=Transcriptional
           regulator, tetR family;[Saccharomonospora viridis]
          Length = 198

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 2/167 (1%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ +R  +T   LL A+I+ +VE+GYAR S   I  RAGVS GA   HF    + MA+ 
Sbjct: 7   RTQAERSAQTRTALLDATIECLVELGYARTSMQEICARAGVSKGAAQHHFADKAELMASA 66

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              +  +  D  T +   + +    +   + +L    +G       EL +AARTD  L+ 
Sbjct: 67  VAHLTTKLADRNTPREGRLASGPGRVAELVDLLWRSYSGTLATAAMELWVAARTDPALRA 126

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAI 169
            ++ V         D  R     +  P E    +  +  N+  G A+
Sbjct: 127 AMRPVDRALGRSTLD--RLAAFLDDIPRERLETLFWLTVNLARGLAL 171


>tr|C1B9V6|C1B9V6_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 194

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 13/179 (7%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ +R      +LL A++D++VE+GYAR +   I +RAGVS GA   HF T    + A 
Sbjct: 12  RTQAERTAAMRTKLLDAAVDSLVELGYARTTTQGIARRAGVSRGAQLHHFPTKESLVVAA 71

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              ++ ++++      AE+ A R      + +L D  +G       EL +AARTD  L E
Sbjct: 72  VEHLVDKRMEEIL--AAEVDAGR-----GVEVLADAFSGPLFYAALELWVAARTDPVLFE 124

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDIDE 181
               +      K+ DA R    AE F +      + +   +  G A V A+   P+ ++
Sbjct: 125 ATVPL----ERKVTDALRR-GSAEVFGDRFDSDAIELSIELVRGLA-VSALFRTPEAEQ 177


>tr|C4RE69|C4RE69_9ACTO Tax_Id=219305 SubName: Full=TetR family
           transcriptional regulator;[Micromonospora sp. ATCC
           39149]
          Length = 201

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 36/120 (30%), Positives = 60/120 (50%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ+R   T ARLL+A+++ ++E G++  +  ++  RAGVS GA   H+ T    + A   
Sbjct: 10  QQERSRATRARLLEATVECLIEHGWSGTTTTVVATRAGVSRGAQLHHYPTRTALVTAAVA 69

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
            +  R+      +   +PA    L+  + +L     G       EL +AARTD +L+  L
Sbjct: 70  HLAERRAGELRTEAEALPAGPQRLDRVIDLLGAAFTGPLFVAALELWVAARTDAELRAAL 129


>tr|Q0S8P2|Q0S8P2_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, TetR family
           protein;[Rhodococcus sp.]
          Length = 197

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ +R      +LL A++D++VE+GYAR +   I +RAGVS GA   HF T    + A 
Sbjct: 15  RTQAERTAAMRTKLLDAAVDSLVELGYARTTTQGIARRAGVSRGAQLHHFPTKESLVVAA 74

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              ++ ++++      A++ A R      + +L D  +G       EL +AARTD  L E
Sbjct: 75  VEHLVDKRMEEIL--AADVDAGR-----GVDVLADAFSGPLFYAALELWVAARTDPALYE 127

Query: 123 TLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDIDE 181
               +      K+ DA R    AE F +      + +   +  G A V A+   P+ ++
Sbjct: 128 ATVPL----ERKVNDALRR-GSAEVFGDRFDADTIELSIELVRGLA-VSALFRTPEAEQ 180


>tr|B1MCQ9|B1MCQ9_MYCA9 Tax_Id=561007 SubName: Full=Putative
           TetR-family transcriptional regulator;[Mycobacterium
           abscessus]
          Length = 228

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 38/125 (30%), Positives = 64/125 (51%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ QR  E   RLL A+++ +V  GYA  +   I + AGV+ GA   HF++  D + A 
Sbjct: 29  RTQAQRSAEMRTRLLDATVECLVAHGYAGTTTPRIAEMAGVTRGAQAYHFQSKEDLVVAA 88

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
              + +++     +++A +  +   + A L  + +I  G       EL IA+RTD  L +
Sbjct: 89  IEHLAQQRTQAAIREIARLQGNPDPVSAVLDFMWEIHQGPIFVATMELWIASRTDKVLAQ 148

Query: 123 TLQHV 127
            +Q +
Sbjct: 149 QIQRM 153


>tr|B0U9S2|B0U9S2_METS4 Tax_Id=426117 SubName: Full=Transcriptional
           regulator, TetR family;[Methylobacterium sp.]
          Length = 221

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 5/182 (2%)

Query: 1   MARTQQQRREETVA---RLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGD 57
           M+RT++Q++  +VA   RL++A++D I EVGY  A+   I +RA VS GAL  HF T  D
Sbjct: 1   MSRTERQQQARSVATRERLVRAALDEIFEVGYHAATTQQIAERARVSRGALLHHFPTRAD 60

Query: 58  FMAATAYEVLRRQLDIFTKQV-AEIPADRPALEAALAILRDITAGATNAVLYELMIAART 116
            + A A EVL        K V A++ +    L   +  L  + +G    +  E++  AR 
Sbjct: 61  IILA-AMEVLLADGTAEIKAVSADVRSGALPLADFVEFLWQLFSGRFFYLSMEMITEARH 119

Query: 117 DDKLKETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQ 176
           D  L+  L  V+ ++ A +          E  P      I+ +  N+  G  +   + P+
Sbjct: 120 DPALRRGLIPVVQRFHAALDAIWVEFCDGERRPPREARIILNLTVNLVRGMGVQTVLRPE 179

Query: 177 PD 178
           PD
Sbjct: 180 PD 181


>tr|Q2CJA5|Q2CJA5_9RHOB Tax_Id=314256 SubName: Full=Putative
           transcriptional regulator;[Oceanicola granulosus
           HTCC2516]
          Length = 216

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 40/133 (30%), Positives = 66/133 (49%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           R  Q R   T  +L+QA+++ I +VG+  AS    ++RAGVS GAL  HF T  D + A 
Sbjct: 13  RPAQARSATTRRKLVQAALEVIYDVGFKSASTPEFSRRAGVSRGALLHHFPTRSDIIVAA 72

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
             E+LR       +    + A   +L   +  L  + +G    +  E +  ARTD +L+ 
Sbjct: 73  MEELLRENTREIRQLAGAVAAQEISLGEFVEFLWQMFSGRFFFLSLEFINEARTDSELRG 132

Query: 123 TLQHVLGQYRAKI 135
            ++ V+  + A +
Sbjct: 133 RMKPVVRDFHAAL 145


>tr|B8INL6|B8INL6_METNO Tax_Id=460265 SubName: Full=Transcriptional
           regulator, TetR family;[Methylobacterium nodulans]
          Length = 209

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 43/133 (32%), Positives = 67/133 (50%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ+QR  ET ARL+ A++D ++E GYAR + A I +RAGV+ GAL  HF    D +  +
Sbjct: 10  RTQEQRTAETRARLIAATLDLLMERGYARTTTAEIAERAGVTRGALNHHFTGKDDLVVHS 69

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKE 122
               LR            +     AL   +  L ++ +G    +  E +  AR +  L+E
Sbjct: 70  VEHQLRTSTGEIRALAELVRNGSLALPGFIDRLWEMFSGRLFLITLEHVTEARHNAALRE 129

Query: 123 TLQHVLGQYRAKI 135
            L  V+ ++ A +
Sbjct: 130 ALVPVVREFHAAL 142


>tr|Q0FXA3|Q0FXA3_9RHOB Tax_Id=314265 SubName: Full=Transcriptional
           Regulator, TetR family protein;[Roseovarius sp.
           HTCC2601]
          Length = 206

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 15/175 (8%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           RTQ QR  +T   LL A+I +++EVGYA  S A I KRAGVS GA   H+    D + A 
Sbjct: 7   RTQDQRSAKTRRLLLDATIQSLMEVGYANTSTAGIAKRAGVSRGAQTHHYPGKMDLIVAA 66

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAAL-AILRDITAGATNAVLYELMIAARTDDKLK 121
             E+             E+ A R + +A   AI   +  G       E+++AAR DD+L+
Sbjct: 67  TEEMFANFATGLETLAGELRAGRLSYDAFFDAIWDGVLNGDWFYSSLEIIVAARGDDELR 126

Query: 122 ETLQHVLGQYRAKIYDA-ARTLPGAEGFPEETFPAIVA------VLTNVFDGAAI 169
             L  ++     +     +RT    +       PA+V+      +  NVF G A+
Sbjct: 127 RQLAPLILDLHERFETTWSRTFVAVD-------PAVVSSRVALNLAMNVFRGMAV 174


>tr|C7MT51|C7MT51_SACVD Tax_Id=471857 SubName: Full=Transcriptional
           regulator, TetR family;[Saccharomonospora viridis]
          Length = 207

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 37/120 (30%), Positives = 59/120 (49%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           +Q+R   T  RLL A+++ + E G+   + A++ +RAGVS GA   HF T  D + AT  
Sbjct: 6   RQERSRTTRRRLLTAAVECLAEHGWTNTTVALVAERAGVSRGAAQHHFPTREDLVVATVE 65

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
            +   Q+     +   +P  R    A   +L ++ AG        L +AA TD+ L+  L
Sbjct: 66  FLAEEQIAEVRSRAETLPRGRRRALAVARMLLNLYAGPKFRAALHLWVAASTDEALRSVL 125


>tr|C5D0B5|C5D0B5_VARPS Tax_Id=543728 SubName: Full=Transcriptional
           regulator, TetR family; Flags: Precursor;[Variovorax
           paradoxus]
          Length = 218

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 35/111 (31%), Positives = 59/111 (53%)

Query: 15  RLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAYEVLRRQLDIF 74
           R+L A+++ ++E G AR +   + +RAGVS GAL  HF T  + +++T  E++RR     
Sbjct: 33  RILNAAVELLIEQGTARTTTLAVQRRAGVSRGALLHHFPTHAELLSSTVQELVRRNEAAV 92

Query: 75  TKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETLQ 125
            + +A++       E A+ +L    A        EL   +RTD +L+  LQ
Sbjct: 93  HEALAKVGVAEDPFERAVKVLATTMAKPAYLAELELWAISRTDIELRTALQ 143


>tr|A4XCU4|A4XCU4_SALTO Tax_Id=369723 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora tropica]
          Length = 201

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 35/120 (29%), Positives = 59/120 (49%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ+R   T  RLL+A++  +VE G++  +  ++  +AGVS GA   H+ T    + A   
Sbjct: 10  QQERSRATQTRLLEATVACLVEHGWSGTTTTVVATQAGVSRGAQLHHYPTKAALVTAAVA 69

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
            +  R+ +    +   +PA    L+  + +L     G       EL +AARTD +L+  L
Sbjct: 70  HLAERRAEELRAEAKTLPAGPQRLDRVVDLLAAAFTGPLFVAALELWVAARTDRELRAAL 129


>tr|D0L373|D0L373_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis]
          Length = 203

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 1/156 (0%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ+R   T  RLL A+ID +   G+A A+ A + +RAGVS GA   HF T    + AT  
Sbjct: 14  QQERSRLTRERLLAATIDALAHDGWASATVAAVAERAGVSRGAAQHHFPTREKLITATLE 73

Query: 65  EVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLKETL 124
           +V    L +     A +PA +  +  A+    +I  G       ++  AA +D  L+  +
Sbjct: 74  QVF-DDLTVRMSTAAAVPAGQDRVRVAVDRAVEIYTGTEFKAALQVWAAAASDSALRGLI 132

Query: 125 QHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVL 160
             +  ++    +       GA+   E+ + A+ A L
Sbjct: 133 LPLEAKFARAAHRMTMATLGADPDDEQAYRAVQATL 168


>tr|A0Y7W0|A0Y7W0_9GAMM Tax_Id=247633 SubName: Full=Transcriptional
           regulator, TetR family protein;[marine gamma
           proteobacterium HTCC2143]
          Length = 207

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 5   QQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAATAY 64
           QQ +     A + +A+ID + + GY   + + +   A  S GAL  HF T  D MAATA 
Sbjct: 10  QQAKSLRARAAITKATIDCLYQRGYGETTLSRVAANALFSKGALQHHFPTKEDLMAATAD 69

Query: 65  EVLRRQLDIFTKQVAEIPADRP-ALEAAL-AILRDITAGATNAVLYELMIAARTDDKLKE 122
           E+L R    F + V   P  RP  +E AL +  R +T       L E++IAARTD+KL+ 
Sbjct: 70  ELLSRP---FARAVK--PESRPITVEQALKSSWRRMTNTPGYRALLEILIAARTDEKLQL 124

Query: 123 TLQHVLGQYRAKIYD--AARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVLPQPDID 180
            +   L ++  K+ D  A  T    +G  E+   A++ +  ++  G  I       P   
Sbjct: 125 RISENLHRWN-KVMDEQAVATYRAVDGTDEDVV-ALLTMTRSLMRGLVIQDRYSDDPSEI 182

Query: 181 EQRI 184
           EQ +
Sbjct: 183 EQHV 186


>tr|C6WCP1|C6WCP1_ACTMD Tax_Id=446462 SubName: Full=Transcriptional
           regulator, TetR family;[Actinosynnema mirum]
          Length = 195

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)

Query: 3   RTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMAAT 62
           R Q  R  +T  RLL A+++ +VE G+A  +  ++ +RAGVS G    HF T G+ +AA 
Sbjct: 7   RRQVDRSADTRRRLLAATVECLVEHGWAGTTTTVVAERAGVSRGGQLHHFRTRGELVAA- 65

Query: 63  AYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATNAVLYELMIAARTDDKLK 121
           A E L  +     +++AE     P   A + ++ +  A    A   EL +AARTD  L+
Sbjct: 66  AVEHLGAESVAHLRRLAERVEGGPV--AVVELIAEFYASDRFAAALELWVAARTDPALR 122


>tr|B6VRQ6|B6VRQ6_STRGD Tax_Id=45398 (rphA3)SubName: Full=Putative
           transcriptional regulator;[Streptomyces griseoviridis]
          Length = 225

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 17/178 (9%)

Query: 1   MARTQQQRREETVARLLQASIDTIVEVGYARASAAIITKRAGVSVGALFRHFETMGDFMA 60
           M+ T  +R +E+ ARLL A+ + IV  G+   +   +   AG+  G +  HF T+ D   
Sbjct: 1   MSPTSAERGQESRARLLAAAAELIVADGWGSVTTRKVADLAGLPPGLVHYHFRTVTDLQI 60

Query: 61  ATAYEVLRRQLDIFTKQVAEIPADRPALEAALAILRDITAGATN---AVLY-ELMIAART 116
             A +  RR++D  T   A + A  P    A  +L ++ A A N    +L+ E+++AA  
Sbjct: 61  DAALDAARREVDAAT--AALVSAADPVAGMA-EVLDELAAYADNDPATILFSEMLLAATR 117

Query: 117 DDKLKETLQHVLGQYRAKIYDAARTLPGAEGFPEETFPAIVAVLTNVFDGAAIVGAVL 174
             +L+E L  +LG +R+ + D  R    + G P +      A  T +  GAA+ G VL
Sbjct: 118 HKRLREELSVLLGNWRSTMADWLR----SHGGPAD------AEATVLLLGAALDGLVL 165


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.134    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,227,725,937
Number of extensions: 44884418
Number of successful extensions: 148501
Number of sequences better than 10.0: 4172
Number of HSP's gapped: 151019
Number of HSP's successfully gapped: 4176
Length of query: 200
Length of database: 3,846,993,858
Length adjustment: 131
Effective length of query: 69
Effective length of database: 2,369,942,265
Effective search space: 163526016285
Effective search space used: 163526016285
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)