BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_1825
         (266 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HJN8|B2HJN8_MYCMM Tax_Id=216594 SubName: Full=Transcription...   459   e-127
tr|A0PQ85|A0PQ85_MYCUA Tax_Id=362242 SubName: Full=Transcription...   404   e-111
tr|Q7TXN2|Q7TXN2_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC...   254   5e-66
tr|Q10808|Q10808_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC...   254   5e-66
tr|C6DWV5|C6DWV5_MYCTK Tax_Id=478434 SubName: Full=Transcription...   254   5e-66
tr|C1AFZ9|C1AFZ9_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   254   5e-66
tr|A5U6N9|A5U6N9_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   254   5e-66
tr|A1KMM8|A1KMM8_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   254   5e-66
tr|A5WRD6|A5WRD6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   254   5e-66
tr|A4KKE8|A4KKE8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   254   5e-66
tr|A2VLL7|A2VLL7_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   254   5e-66
tr|Q73VR4|Q73VR4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   212   4e-53
tr|A0QJ21|A0QJ21_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   207   7e-52
tr|Q5Z298|Q5Z298_NOCFA Tax_Id=37329 SubName: Full=Putative trans...   146   2e-33
tr|C0ZP18|C0ZP18_RHOE4 Tax_Id=234621 SubName: Full=Putative tran...   145   5e-33
tr|C3JEI6|C3JEI6_RHOER Tax_Id=596309 SubName: Full=Transcription...   145   5e-33
tr|C6WPR8|C6WPR8_ACTMD Tax_Id=446462 SubName: Full=Putative two ...   143   2e-32
tr|Q0S741|Q0S741_RHOSR Tax_Id=101510 (glnR)SubName: Full=Transcr...   142   3e-32
tr|C1ATC5|C1ATC5_RHOOB Tax_Id=632772 SubName: Full=Putative tran...   142   3e-32
tr|B1MI18|B1MI18_MYCA9 Tax_Id=561007 SubName: Full=Probable tran...   142   4e-32
tr|Q7D983|Q7D983_MYCTU Tax_Id=1773 SubName: Full=Transcriptional...   141   7e-32
tr|Q7U174|Q7U174_MYCBO Tax_Id=1765 SubName: Full=TRANSCRIPTIONAL...   140   1e-31
tr|O53830|O53830_MYCTU Tax_Id=1773 SubName: Full=TRANSCRIPTIONAL...   140   1e-31
tr|C6DVC3|C6DVC3_MYCTK Tax_Id=478434 SubName: Full=Transcription...   140   1e-31
tr|C1ALF3|C1ALF3_MYCBT Tax_Id=561275 SubName: Full=Transcription...   140   1e-31
tr|A5U0K7|A5U0K7_MYCTA Tax_Id=419947 SubName: Full=Transcription...   140   1e-31
tr|A4T7G9|A4T7G9_MYCGI Tax_Id=350054 SubName: Full=Response regu...   140   1e-31
tr|A1KGV1|A1KGV1_MYCBP Tax_Id=410289 SubName: Full=Transcription...   140   1e-31
tr|A5WKI7|A5WKI7_MYCTF Tax_Id=336982 SubName: Full=Transcription...   140   1e-31
tr|A2VGB8|A2VGB8_MYCTU Tax_Id=348776 SubName: Full=Transcription...   140   1e-31
tr|A4X1M8|A4X1M8_SALTO Tax_Id=369723 SubName: Full=Putative two ...   140   2e-31
tr|D0L3V6|D0L3V6_GORB4 Tax_Id=526226 SubName: Full=Transcription...   140   2e-31
tr|C4RCZ7|C4RCZ7_9ACTO Tax_Id=219305 SubName: Full=Two-component...   140   2e-31
tr|Q1B3A5|Q1B3A5_MYCSS Tax_Id=164756 SubName: Full=Response regu...   139   3e-31
tr|B2HH14|B2HH14_MYCMM Tax_Id=216594 SubName: Full=Transcription...   139   3e-31
tr|A3Q696|A3Q696_MYCSJ Tax_Id=164757 SubName: Full=Response regu...   139   3e-31
tr|A1ULU5|A1ULU5_MYCSK Tax_Id=189918 SubName: Full=Response regu...   139   3e-31
tr|A4KFD0|A4KFD0_MYCTU Tax_Id=395095 SubName: Full=Transcription...   139   4e-31
tr|A8LYQ6|A8LYQ6_SALAI Tax_Id=391037 SubName: Full=Putative two ...   138   6e-31
tr|A0R4C4|A0R4C4_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   138   7e-31
tr|A1TFB8|A1TFB8_MYCVP Tax_Id=350058 SubName: Full=Response regu...   137   1e-30
tr|A0PLC6|A0PLC6_MYCUA Tax_Id=362242 SubName: Full=Transcription...   137   2e-30
tr|C5C236|C5C236_BEUC1 Tax_Id=471853 SubName: Full=Putative two ...   135   4e-30
tr|C1BCC2|C1BCC2_RHOOB Tax_Id=632772 SubName: Full=Putative tran...   134   8e-30
tr|Q743D6|Q743D6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   134   1e-29
tr|A0QAU7|A0QAU7_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   134   1e-29
tr|B5GEX4|B5GEX4_9ACTO Tax_Id=465543 SubName: Full=Two-component...   134   1e-29
tr|C8XA56|C8XA56_NAKMY Tax_Id=479431 SubName: Full=Putative two ...   133   2e-29
tr|Q2JFW3|Q2JFW3_FRASC Tax_Id=106370 SubName: Full=Response regu...   131   7e-29
tr|B5HLW3|B5HLW3_9ACTO Tax_Id=463191 SubName: Full=Transcription...   131   7e-29

>tr|B2HJN8|B2HJN8_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 266

 Score =  459 bits (1182), Expect = e-127
 Identities = 231/266 (86%), Positives = 231/266 (86%)

Query: 1   MRTGVAGTPRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDV 60
           MRTGVAGTPRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDV
Sbjct: 1   MRTGVAGTPRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDV 60

Query: 61  AMIDARSDLATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXX 120
           AMIDARSDLATARSTCRRLTANAPS          DFVDIDIDWHFDDV           
Sbjct: 61  AMIDARSDLATARSTCRRLTANAPSVAVVAVVAAADFVDIDIDWHFDDVLLAAAGAAELR 120

Query: 121 XXXXXXXXXXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAF 180
                         KGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAF
Sbjct: 121 ARLRLAVTRRRRARKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAF 180

Query: 181 TRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTA 240
           TRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTA
Sbjct: 181 TRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTA 240

Query: 241 RQPVLSPGSGPEPQDISVPTEQVLAR 266
           RQPVLSPGSGPEPQDISVPTEQVLAR
Sbjct: 241 RQPVLSPGSGPEPQDISVPTEQVLAR 266


>tr|A0PQ85|A0PQ85_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 246

 Score =  404 bits (1037), Expect = e-111
 Identities = 203/246 (82%), Positives = 204/246 (82%)

Query: 21  LLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRRLT 80
           +LSNAADFESTLPTLKSFASVIQHARLDAA PPDWAGPDVAMIDARSDL TARS CRRLT
Sbjct: 1   MLSNAADFESTLPTLKSFASVIQHARLDAADPPDWAGPDVAMIDARSDLTTARSACRRLT 60

Query: 81  ANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXKGTLEF 140
           ANAPS          DFVDIDIDWHFDDV                         KGTLEF
Sbjct: 61  ANAPSVAVVAVVAAADFVDIDIDWHFDDVLLAAAGAAELRARLRLAVMRRRRARKGTLEF 120

Query: 141 GDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCNGRART 200
           GDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFT TRLMHEVWGYDCNGRART
Sbjct: 121 GDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTHTRLMHEVWGYDCNGRART 180

Query: 201 VDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQDISVPT 260
           VDVHVRRLRAKLGADHESMVDT RGVGYMAVTPP PRWTARQPVLSPGSGPEPQDISVPT
Sbjct: 181 VDVHVRRLRAKLGADHESMVDTERGVGYMAVTPPPPRWTARQPVLSPGSGPEPQDISVPT 240

Query: 261 EQVLAR 266
           EQVL R
Sbjct: 241 EQVLVR 246


>tr|Q7TXN2|Q7TXN2_MYCBO Tax_Id=1765 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|Q10808|Q10808_MYCTU Tax_Id=1773 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN; SubName:
           Full=Transcriptional regulator;[Mycobacterium
           tuberculosis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|C6DWV5|C6DWV5_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|C1AFZ9|C1AFZ9_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|A5U6N9|A5U6N9_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|A1KMM8|A1KMM8_MYCBP Tax_Id=410289 SubName: Full=Probable
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|A5WRD6|A5WRD6_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|A4KKE8|A4KKE8_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|A2VLL7|A2VLL7_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 252

 Score =  254 bits (650), Expect = 5e-66
 Identities = 132/238 (55%), Positives = 157/238 (65%)

Query: 9   PRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSD 68
           P  V R  L VLLL++ AD ES LP L+SFA  +Q A LD  G    A  DVA+IDAR+D
Sbjct: 12  PHEVWRYLLEVLLLTDEADLESALPELESFAQSVQRAPLDDPGAAKGADADVAIIDARAD 71

Query: 69  LATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXX 128
           LA AR  CRRLT +AP+          +FV +D DW FDDV                   
Sbjct: 72  LAAARRVCRRLTTSAPALAVVAVVAPANFVAVDGDWIFDDVLLNAAGGAELQARLRLAIT 131

Query: 129 XXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHE 188
                  GTL+FGDL +HP S T ++    LGLTLTEF+L +FLV+HAG+AFTRTRLM E
Sbjct: 132 RRRSTLAGTLQFGDLVLHPASYTASLGDRDLGLTLTEFKLMNFLVQHAGRAFTRTRLMRE 191

Query: 189 VWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLS 246
           VWGY+C+GR RTVDVHVRRLRAKLGA+HESM+DTVRGVGYMAVTPP PRW   + +L+
Sbjct: 192 VWGYECHGRIRTVDVHVRRLRAKLGAEHESMIDTVRGVGYMAVTPPQPRWIISESILN 249


>tr|Q73VR4|Q73VR4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 253

 Score =  212 bits (539), Expect = 4e-53
 Identities = 115/235 (48%), Positives = 143/235 (60%), Gaps = 1/235 (0%)

Query: 4   GVAGTPRGVGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMI 63
           G A T RG+    L V++L+N  DFES LP L  FA   + A L   G   +   DVA+I
Sbjct: 13  GEARTSRGL-EMSLDVVVLTNEDDFESALPDLSRFARPARRAALSTDGDGQFGPADVAII 71

Query: 64  DARSDLATARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXX 123
           DARS++A A++   RLTA+ P+          D   +D+D +FDDV              
Sbjct: 72  DARSNVAAAQAVSHRLTADHPATAVVALVAPADCAAVDVDCNFDDVMLPGTCAEELQARL 131

Query: 124 XXXXXXXXXXXKGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRT 183
                       GTL+FGDL +HP S T ++ G  L LTLTEF+L +FLV+HAGQAFTRT
Sbjct: 132 RLAIGRRRGGLDGTLKFGDLLLHPASFTASLDGRELNLTLTEFKLLNFLVQHAGQAFTRT 191

Query: 184 RLMHEVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRW 238
           RLM + WGY+ NGRARTVDVH+RRLRAKLG  H+S+V TVRGVGY A TPP P W
Sbjct: 192 RLMQQAWGYEGNGRARTVDVHIRRLRAKLGTRHQSLVGTVRGVGYRAPTPPQPEW 246


>tr|A0QJ21|A0QJ21_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator GlnR;[Mycobacterium avium]
          Length = 231

 Score =  207 bits (528), Expect = 7e-52
 Identities = 109/222 (49%), Positives = 136/222 (61%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L V++L+N  DFES LP L  FA   + A L   G   +   DVA+IDARS++A A++  
Sbjct: 3   LDVVVLTNEDDFESALPDLSRFARPARRAALSTDGDGQFGPADVAIIDARSNVAAAQAVS 62

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXKG 136
            RLTA+ P+          D   +D+D +FDDV                          G
Sbjct: 63  HRLTADHPATAVVALVAPADCAAVDVDCNFDDVMLPGTCAEELQARLRLAIGRRRGGLDG 122

Query: 137 TLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCNG 196
           TL+FGDL +HP S T ++ G  L LTLTEF+L +FLV+HAGQAFTRTRLM + WGY+ NG
Sbjct: 123 TLKFGDLLLHPASFTASLDGRELNLTLTEFKLLNFLVQHAGQAFTRTRLMQQAWGYEGNG 182

Query: 197 RARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRW 238
           RARTVDVH+RRLRAKLG  H+S+V TVRGVGY   TPP P W
Sbjct: 183 RARTVDVHIRRLRAKLGTRHQSLVGTVRGVGYRVPTPPQPEW 224


>tr|Q5Z298|Q5Z298_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 252

 Score =  146 bits (369), Expect = 2e-33
 Identities = 84/221 (38%), Positives = 115/221 (52%), Gaps = 4/221 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL++  + ES LP+L   A  ++ A  + A   +    DVA++DAR+DLA AR  C
Sbjct: 1   MELLLLTSDPNPESVLPSLALLAHTVRPAPTEVASLLEAGTADVALVDARTDLAAARGLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L +   S            V ++ DW  DD+                           
Sbjct: 61  RLLGSTGSSVPVVAVLTEGGLVAVNADWGLDDILLPGTGPAELDARLRLLVGRNGGVASP 120

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGY
Sbjct: 121 ENTGKITLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           D  G  RTVDVHVRRLRAKLG+++ES++ TVR VGY AV P
Sbjct: 181 DFFGGTRTVDVHVRRLRAKLGSEYESLIGTVRNVGYKAVRP 221


>tr|C0ZP18|C0ZP18_RHOE4 Tax_Id=234621 SubName: Full=Putative
           transcriptional regulator;[Rhodococcus erythropolis]
          Length = 250

 Score =  145 bits (366), Expect = 5e-33
 Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL++  + E+ LP L   A  ++ A  + +   + +  DVA++DAR+DLA AR  C
Sbjct: 1   MELLLLTSDPNPEAVLPALALLAHSVRPAPTEVSSLLEASSADVALVDARTDLAAARGLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L +   +            V ++ DW  DD+                           
Sbjct: 61  RLLGSTGSAVPVVAVLTEGGLVAVNADWGLDDILLPGTGPAEVDARLRLLVARSGGVASP 120

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGY
Sbjct: 121 EASGKITLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPV 244
           D  G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P   +  A  PV
Sbjct: 181 DFFGGTRTVDVHVRRLRAKLGTEYESLIGTVRNVGYKAVRPTRAKGGAAAPV 232


>tr|C3JEI6|C3JEI6_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator;[Rhodococcus erythropolis SK121]
          Length = 250

 Score =  145 bits (366), Expect = 5e-33
 Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL++  + E+ LP L   A  ++ A  + +   + +  DVA++DAR+DLA AR  C
Sbjct: 1   MELLLLTSDPNPEAVLPALALLAHSVRPAPTEVSSLLEASSADVALVDARTDLAAARGLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L +   +            V ++ DW  DD+                           
Sbjct: 61  RLLGSTGSAVPVVAVLTEGGLVAVNADWGLDDILLPGTGPAEVDARLRLLVARSGGVASP 120

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGY
Sbjct: 121 EASGKITLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPV 244
           D  G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P   +  A  PV
Sbjct: 181 DFFGGTRTVDVHVRRLRAKLGTEYESLIGTVRNVGYKAVRPTRAKGGAAAPV 232


>tr|C6WPR8|C6WPR8_ACTMD Tax_Id=446462 SubName: Full=Putative two
           component transcriptional regulator, winged helix
           family;[Actinosynnema mirum]
          Length = 250

 Score =  143 bits (360), Expect = 2e-32
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 3/221 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           VLLL+   D E+ LP L      ++  R + +   +    DV ++DAR+DL  AR  CR 
Sbjct: 5   VLLLTTDPDPEAVLPALALLPHEVRPLRPEVSALLEAGPHDVVLVDARTDLVGARGLCRL 64

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L ++               V ++ DW  D++                             
Sbjct: 65  LDSSGVDVPVVAIVTEGSLVAVNADWSVDEILLPTSGPAEVDARLRLVRSRRGAAQSGGD 124

Query: 136 GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCN 195
           G+L+ G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGYD  
Sbjct: 125 GSLQLGELVIDEATYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDFF 184

Query: 196 GRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLP 236
           G  RTVDVHVRRLRAKLG +HES++ TVR VGY  V PP P
Sbjct: 185 GGTRTVDVHVRRLRAKLGPEHESLIGTVRNVGYKFVRPPRP 225


>tr|Q0S741|Q0S741_RHOSR Tax_Id=101510 (glnR)SubName:
           Full=Transcriptional regulator;[Rhodococcus sp.]
          Length = 256

 Score =  142 bits (359), Expect = 3e-32
 Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 12  VGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLAT 71
           +G C + +LLL++  + E+ LP L   A  ++ A  + +   + +  D+A++DAR+DLA 
Sbjct: 1   MGGC-VELLLLTSDPNPEAVLPALALLAHSVRPAPTEVSSLLEASSADIALVDARTDLAA 59

Query: 72  ARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXX 131
           AR  CR L +   +            V ++ DW  DD+                      
Sbjct: 60  ARGLCRLLGSTGSAVPVVAVLTEGGLVAVNSDWGLDDILLPGTGPAEVDARLRLLVGRTG 119

Query: 132 XXXK----GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMH 187
                   G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ 
Sbjct: 120 GVASPEASGKITLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQ 179

Query: 188 EVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           EVWGYD  G  RTVDVHVRRLRAKLG+++ES++ TVR VGY AV P
Sbjct: 180 EVWGYDFFGGTRTVDVHVRRLRAKLGSEYESLIGTVRNVGYKAVRP 225


>tr|C1ATC5|C1ATC5_RHOOB Tax_Id=632772 SubName: Full=Putative
           transcriptional regulator;[Rhodococcus opacus]
          Length = 256

 Score =  142 bits (359), Expect = 3e-32
 Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 12  VGRCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLAT 71
           +G C + +LLL++  + E+ LP L   A  ++ A  + +   + +  D+A++DAR+DLA 
Sbjct: 1   MGGC-VELLLLTSDPNPEAVLPALALLAHSVRPAPTEVSSLLEASSADIALVDARTDLAA 59

Query: 72  ARSTCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXX 131
           AR  CR L +   +            V ++ DW  DD+                      
Sbjct: 60  ARGLCRLLGSTGSAVPVVAVLTEGGLVAVNSDWGLDDILLPGTGPAEVDARLRLLVGRTG 119

Query: 132 XXXK----GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMH 187
                   G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ 
Sbjct: 120 GVASPEASGKITLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQ 179

Query: 188 EVWGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           EVWGYD  G  RTVDVHVRRLRAKLG+++ES++ TVR VGY AV P
Sbjct: 180 EVWGYDFFGGTRTVDVHVRRLRAKLGSEYESLIGTVRNVGYKAVRP 225


>tr|B1MI18|B1MI18_MYCA9 Tax_Id=561007 SubName: Full=Probable
           transcriptional regulatory protein;[Mycobacterium
           abscessus]
          Length = 268

 Score =  142 bits (358), Expect = 4e-32
 Identities = 82/222 (36%), Positives = 113/222 (50%), Gaps = 4/222 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL+   + +  LP+L   A  ++    + +   +    DVA++DAR+DLA+AR  C
Sbjct: 6   LDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLASARGLC 65

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L A   S            V +++DW  DD+                           
Sbjct: 66  RLLGAAGSSVPVVAVVNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRAGAVNV 125

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
                +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGY
Sbjct: 126 ENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY 185

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPP 234
           D  G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV PP
Sbjct: 186 DFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPP 227


>tr|Q7D983|Q7D983_MYCTU Tax_Id=1773 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 268

 Score =  141 bits (356), Expect = 7e-32
 Identities = 82/234 (35%), Positives = 114/234 (48%), Gaps = 4/234 (1%)

Query: 14  RCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATAR 73
           R  L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R
Sbjct: 12  RGLLELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGR 71

Query: 74  STCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXX 133
             CR L++   S            V +  DW  D++                        
Sbjct: 72  GLCRLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDL 131

Query: 134 XK----GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEV 189
                 G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEV
Sbjct: 132 ADQESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEV 191

Query: 190 WGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           WGYD  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 192 WGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 245


>tr|Q7U174|Q7U174_MYCBO Tax_Id=1765 SubName: Full=TRANSCRIPTIONAL
           REGULATORY PROTEIN;[Mycobacterium bovis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|O53830|O53830_MYCTU Tax_Id=1773 SubName: Full=TRANSCRIPTIONAL
           REGULATORY PROTEIN;[Mycobacterium tuberculosis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|C6DVC3|C6DVC3_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|C1ALF3|C1ALF3_MYCBT Tax_Id=561275 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium bovis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|A5U0K7|A5U0K7_MYCTA Tax_Id=419947 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|A4T7G9|A4T7G9_MYCGI Tax_Id=350054 SubName: Full=Response
           regulator receiver protein;[Mycobacterium gilvum]
          Length = 278

 Score =  140 bits (354), Expect = 1e-31
 Identities = 82/221 (37%), Positives = 112/221 (50%), Gaps = 4/221 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  C
Sbjct: 16  LDLLLLTVDPHPESVLPSLSLLAHAVRTAPTEVSSLLEAGTADVAIVDARTDLAAARGLC 75

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L     S            V ++++W  D++                           
Sbjct: 76  RLLGTTGTSVPVVAVVNEGGLVAVNVEWGLDEILLPSTGPAEIDARLRLLVGRRGGMANQ 135

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGY
Sbjct: 136 ENLGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGY 195

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           D  G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P
Sbjct: 196 DFFGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRP 236


>tr|A1KGV1|A1KGV1_MYCBP Tax_Id=410289 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium bovis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|A5WKI7|A5WKI7_MYCTF Tax_Id=336982 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium tuberculosis]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|A2VGB8|A2VGB8_MYCTU Tax_Id=348776 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium tuberculosis C]
          Length = 255

 Score =  140 bits (354), Expect = 1e-31
 Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRPPAADP 232


>tr|A4X1M8|A4X1M8_SALTO Tax_Id=369723 SubName: Full=Putative two
           component transcriptional regulator, winged helix
           family;[Salinispora tropica]
          Length = 239

 Score =  140 bits (352), Expect = 2e-31
 Identities = 82/219 (37%), Positives = 110/219 (50%), Gaps = 3/219 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +L+ ++A +  + LP L      ++ A  D         PDV +IDARS+L+ AR TCR 
Sbjct: 7   LLVTAHAGEPSAVLPALDLLPHSVRTAPRDVRTLVAGPSPDVVVIDARSELSEARDTCRM 66

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXKG-- 136
           L A   +            + ++ DW  DDV                          G  
Sbjct: 67  LHATGLNAPLIAVVTEAGLIALNADWGVDDVILASAGPAEVEARLRLVIGRLADTTMGAD 126

Query: 137 -TLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCN 195
            ++  G+L I  D+    + G  L LT  EF L  FL +H G+ FTR +L+ EVWGYD  
Sbjct: 127 SSIRAGELTIDTDTYAAKLKGRPLDLTYKEFELLKFLAQHPGRVFTRDQLLREVWGYDYF 186

Query: 196 GRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPP 234
           G  RTVDVHVRRLRAKLG+++ESM+ TVR VGY  V PP
Sbjct: 187 GGTRTVDVHVRRLRAKLGSEYESMIGTVRQVGYKLVVPP 225


>tr|D0L3V6|D0L3V6_GORB4 Tax_Id=526226 SubName: Full=Transcriptional
           regulator domain protein;[Gordonia bronchialis]
          Length = 270

 Score =  140 bits (352), Expect = 2e-31
 Identities = 86/241 (35%), Positives = 117/241 (48%), Gaps = 6/241 (2%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+   + ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTADPNPESVLPSLSLLAHTVRVAPTEVSSLMEAGNSDVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXX---- 134
           L +   +            V ++ DW  D+                              
Sbjct: 63  LGSTGSAAPVAAVLTEGGLVAVNADWGIDEFLLPGTGPAELDARLRLLLARTRGVSTEEA 122

Query: 135 KGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G  L LT  EF L  +L ++AG+ FTR +L+ EVWGYD 
Sbjct: 123 SGKVPLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQNAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQ 254
            G  RTVDVHVRRLRAKLG++HES++ TVR VGY AV P   R       L  G  P   
Sbjct: 183 FGGTRTVDVHVRRLRAKLGSEHESLIGTVRNVGYKAVRPSRGRSAGSDAAL--GDSPAVD 240

Query: 255 D 255
           D
Sbjct: 241 D 241


>tr|C4RCZ7|C4RCZ7_9ACTO Tax_Id=219305 SubName: Full=Two-component
           system response regulator;[Micromonospora sp. ATCC
           39149]
          Length = 237

 Score =  140 bits (352), Expect = 2e-31
 Identities = 81/219 (36%), Positives = 109/219 (49%), Gaps = 3/219 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +L+ + A +    LP L      ++ A  D         PD  ++DARS+L+ AR+TCR 
Sbjct: 5   LLVTARAGEPSVVLPALDLLPHSVRTAPRDVRTLVAGPSPDAVLVDARSELSEARATCRM 64

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L A                + ++ DW  DDV                             
Sbjct: 65  LHATGLGVPLVAVVTEAGLIALNADWGVDDVILASAGPAEVEARLRLAVGRLSNATAGAG 124

Query: 136 GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCN 195
           G++  G+L+I PD+    + G  L LT  EF L  FL +H G+ FTR +L+ EVWGYD  
Sbjct: 125 GSIRAGELSIDPDTYAAKLKGRPLDLTYKEFELLKFLAQHPGRVFTRDQLLREVWGYDYF 184

Query: 196 GRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPP 234
           G  RTVDVHVRRLRAKLG+++ESM+ TVR VGY  V PP
Sbjct: 185 GGTRTVDVHVRRLRAKLGSEYESMIGTVRQVGYKFVVPP 223


>tr|Q1B3A5|Q1B3A5_MYCSS Tax_Id=164756 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 257

 Score =  139 bits (350), Expect = 3e-31
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L     S            V ++ +W  D++                             
Sbjct: 63  LGTTGTSVPVVAVVTEGGLVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQEN 122

Query: 136 -GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGYD 
Sbjct: 123 AGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQ 254
            G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P   R  A +  LS        
Sbjct: 183 FGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDYET 242

Query: 255 DISVP 259
             SVP
Sbjct: 243 PDSVP 247


>tr|B2HH14|B2HH14_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 264

 Score =  139 bits (350), Expect = 3e-31
 Identities = 82/231 (35%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 14  RCFLRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATAR 73
           R  L +LLL++    +  LP+L      ++ A  +A+   +    D  ++DAR+DL+ AR
Sbjct: 8   RGLLELLLLTSELYPDPVLPSLSLLPHNVRTAPAEASSLLEAGNADAVLVDARNDLSAAR 67

Query: 74  STCRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXX 133
             CR L+    S            V +  DW  D++                        
Sbjct: 68  GLCRLLSTAGRSVPVLAVVNEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGGQ 127

Query: 134 XK----GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEV 189
                 G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEV
Sbjct: 128 ADQESVGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEV 187

Query: 190 WGYDCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTA 240
           WGYD  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A
Sbjct: 188 WGYDFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRSVA 238


>tr|A3Q696|A3Q696_MYCSJ Tax_Id=164757 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 257

 Score =  139 bits (350), Expect = 3e-31
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L     S            V ++ +W  D++                             
Sbjct: 63  LGTTGTSVPVVAVVTEGGLVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQEN 122

Query: 136 -GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGYD 
Sbjct: 123 AGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQ 254
            G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P   R  A +  LS        
Sbjct: 183 FGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDYET 242

Query: 255 DISVP 259
             SVP
Sbjct: 243 PDSVP 247


>tr|A1ULU5|A1ULU5_MYCSK Tax_Id=189918 SubName: Full=Response
           regulator receiver protein;[Mycobacterium sp.]
          Length = 257

 Score =  139 bits (350), Expect = 3e-31
 Identities = 88/245 (35%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTVDPHPESVLPSLSLLAHNVRAAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L     S            V ++ +W  D++                             
Sbjct: 63  LGTTGTSVPVVAVVTEGGLVAVNHEWGLDEILLPGTGPAEIDARLRLLVGRRGGVANQEN 122

Query: 136 -GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGYD 
Sbjct: 123 AGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQ 254
            G  RTVDVHVRRLRAKLG ++ES++ TVR VGY AV P   R  A +  LS        
Sbjct: 183 FGGTRTVDVHVRRLRAKLGPEYESLIGTVRNVGYKAVRPARGRPPAPEAELSDDEDDYET 242

Query: 255 DISVP 259
             SVP
Sbjct: 243 PDSVP 247


>tr|A4KFD0|A4KFD0_MYCTU Tax_Id=395095 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 255

 Score =  139 bits (349), Expect = 4e-31
 Identities = 80/231 (34%), Positives = 112/231 (48%), Gaps = 4/231 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP L      ++ A  +A+   +    D  ++DAR+DL++ R  C
Sbjct: 2   LELLLLTSELYPDPVLPALSLLPHTVRTAPAEASSLLEAGNADAVLVDARNDLSSGRGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L++   S            V +  DW  D++                           
Sbjct: 62  RLLSSTGRSIPVLAVVSEGGLVAVSADWGLDEILLLSTGPAEIDARLRLVVGRRGDLADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESLGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           D  G  RTVDVHVRRLRAKLG +HE+++  VR VGY AV P   R  A  P
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGAVRNVGYKAVRPARGRPPAADP 232


>tr|A8LYQ6|A8LYQ6_SALAI Tax_Id=391037 SubName: Full=Putative two
           component transcriptional regulator, winged helix
           family;[Salinispora arenicola]
          Length = 239

 Score =  138 bits (348), Expect = 6e-31
 Identities = 82/228 (35%), Positives = 112/228 (49%), Gaps = 3/228 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +L+ + A +  + LP L      I+ A  D         PD  +IDARS+L+ AR+TCR 
Sbjct: 7   LLVTARAGEPSAVLPALDLLPHSIRTAPRDVRTLVAGPSPDAVLIDARSELSEARATCRM 66

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDV---XXXXXXXXXXXXXXXXXXXXXXXXXK 135
           L A   +            + ++ DW  DDV                             
Sbjct: 67  LHATGLNAPLLAVVTEAGLIALNADWGVDDVVLASAGPAEVEARLRLVVGRRNDTVARAD 126

Query: 136 GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCN 195
            ++  G+L I P++    + G  L LT  EF L  FL +H G+ FTR +L+ EVWGYD  
Sbjct: 127 SSVRAGELTIDPETYAAKLKGRPLDLTYKEFELLKFLAQHPGRVFTRDQLLREVWGYDYF 186

Query: 196 GRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQP 243
           G  RTVDVHVRRLRAKLG+++ESM+ TVR VGY  V PP      ++P
Sbjct: 187 GGTRTVDVHVRRLRAKLGSEYESMIGTVRQVGYKFVVPPSRALPEKEP 234


>tr|A0R4C4|A0R4C4_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium smegmatis]
          Length = 261

 Score =  138 bits (347), Expect = 7e-31
 Identities = 84/241 (34%), Positives = 119/241 (49%), Gaps = 9/241 (3%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTVDPHPESVLPSLSLLAHTVRTAPTEVSSLLETGSADVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L     S            V ++ +W  D++                             
Sbjct: 63  LGTTGTSVPVVAVINEGGLVAVNHEWGLDEILLPSTGPAEIDARLRLLVGRRGGNANQEN 122

Query: 136 -GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G+ L LT  EF L  +L +HAG+ FTR +L+ EVWGYD 
Sbjct: 123 VGKITLGELVIDEGTYTARLRGKPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPGSGPEPQ 254
            G  RTVDVHVRRLRAKLG ++E+++ TVR VGY AV P     +  +P  +  SG +  
Sbjct: 183 FGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRP-----SRGKPPAADASGEDVP 237

Query: 255 D 255
           D
Sbjct: 238 D 238


>tr|A1TFB8|A1TFB8_MYCVP Tax_Id=350058 SubName: Full=Response
           regulator receiver protein;[Mycobacterium vanbaalenii]
          Length = 267

 Score =  137 bits (345), Expect = 1e-30
 Identities = 80/219 (36%), Positives = 111/219 (50%), Gaps = 4/219 (1%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LLL+     ES LP+L   A  ++ A  + +   +    DVA++DAR+DLA AR  CR 
Sbjct: 3   LLLLTVDPHPESVLPSLALLAHNVRTAPTEVSSLLEAGTADVAIVDARTDLAAARGLCRL 62

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK--- 135
           L     S            V ++++W  D++                             
Sbjct: 63  LGTTGTSVPVVAVVNEGGLVAVNVEWGLDEILLPSTGPAEIDARLRLLVGRRGGMANQEN 122

Query: 136 -GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
            G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+ EVWGYD 
Sbjct: 123 LGKISLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQEVWGYDF 182

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
            G  RTVDVHVRRLRAKLG ++E+++ TVR VGY AV P
Sbjct: 183 FGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRP 221


>tr|A0PLC6|A0PLC6_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 255

 Score =  137 bits (344), Expect = 2e-30
 Identities = 81/228 (35%), Positives = 111/228 (48%), Gaps = 4/228 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           L +LLL++    +  LP+L      ++ A  +A+   +    D  + DAR+DL+ AR  C
Sbjct: 2   LELLLLTSELYPDPVLPSLSLLPHNVRTAPAEASSLLEAGNADAVLADARNDLSAARGLC 61

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L+    S            V +  DW  D++                           
Sbjct: 62  RLLSTAGRSVPVLAVVNEGGLVAVSADWGLDEILLPSTGPAEIDARLRLVVGRRGGQADQ 121

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 122 ESVGKVSLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTA 240
           D  G  RTVDVHVRRLRAKLG +HE+++ TVR VGY AV P   R  A
Sbjct: 182 DFFGGTRTVDVHVRRLRAKLGPEHEALIGTVRNVGYKAVRPARGRSVA 229


>tr|C5C236|C5C236_BEUC1 Tax_Id=471853 SubName: Full=Putative two
           component transcriptional regulator, winged helix
           family;[Beutenbergia cavernae]
          Length = 240

 Score =  135 bits (341), Expect = 4e-30
 Identities = 85/234 (36%), Positives = 108/234 (46%), Gaps = 5/234 (2%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCRR 78
           +LL S        LP L      I+   ++ +   D    DV ++DAR DL TAR+TCR 
Sbjct: 5   LLLTSEPGGSAQVLPALSLLNHRIRVLPVEPSALLDAPDADVVLLDARRDLVTARTTCRL 64

Query: 79  LTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXKGT- 137
           L +   +              +  DW  DD+                             
Sbjct: 65  LRSTGLAVPLLLVLTEGGLTVVTADWGTDDIILDTAGPAELTTRLRLLAERGATQRGADE 124

Query: 138 ---LEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDC 194
              +E G+L I P   TV + G  L LT  EF L  +LV+H G+ FTR +L+ EVWGYD 
Sbjct: 125 PTEIEAGELMIDPSGYTVRLRGRPLDLTYKEFELLKYLVQHPGRVFTRAQLLQEVWGYDY 184

Query: 195 NGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPG 248
            G  RTVDVHVRRLRAKLG +HE ++ TVR VGY    PP  R  A  P  S G
Sbjct: 185 YGGTRTVDVHVRRLRAKLGTEHEQLIGTVRNVGY-RFDPPRERRVAEPPPASDG 237


>tr|C1BCC2|C1BCC2_RHOOB Tax_Id=632772 SubName: Full=Putative
           transcriptional regulator;[Rhodococcus opacus]
          Length = 231

 Score =  134 bits (338), Expect = 8e-30
 Identities = 85/218 (38%), Positives = 111/218 (50%), Gaps = 4/218 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +L+L+   D ES LP L   A   + A L+A+   D    DV ++DAR+DLA AR  C
Sbjct: 1   MELLVLTGDLDPESVLPALGLLAHTARSAPLEASSFLDTDRVDVVLVDARADLAAARDLC 60

Query: 77  R-RLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK 135
           R R T+++              V +  +W  DD+                          
Sbjct: 61  RSRKTSDSAVVPVVAVLTEGGLVAVTPEWGLDDILLTGAGPAELNARLRLLAGRSGGAGP 120

Query: 136 -GTLEF--GDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
            GT++   GDL I   + T  V G  L LT  EF L   LV+HAGQ FTR +L+  VWGY
Sbjct: 121 DGTVKIALGDLVIDDLTYTARVRGRPLDLTYKEFELLKHLVQHAGQVFTRAQLLQTVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMA 230
           D  G  RTVDVHVRR+RAKLG +H S++ TVR VGY A
Sbjct: 181 DFFGGTRTVDVHVRRVRAKLGVEHHSLIQTVRNVGYKA 218


>tr|Q743D6|Q743D6_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 260

 Score =  134 bits (336), Expect = 1e-29
 Identities = 77/221 (34%), Positives = 111/221 (50%), Gaps = 4/221 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL+     +  LP+L   A  ++ A  + +   +    D  ++DAR+DL++AR  C
Sbjct: 1   MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L+    S            V ++ DW  D++                           
Sbjct: 61  RLLSTAGRSVPVLAVVSEGGLVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQ 120

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 121 ESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           D  G  RTVDVHVRRLRAKLG ++E+++ TVR VGY AV P
Sbjct: 181 DFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRP 221


>tr|A0QAU7|A0QAU7_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium avium]
          Length = 260

 Score =  134 bits (336), Expect = 1e-29
 Identities = 77/221 (34%), Positives = 111/221 (50%), Gaps = 4/221 (1%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL+     +  LP+L   A  ++ A  + +   +    D  ++DAR+DL++AR  C
Sbjct: 1   MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L+    S            V ++ DW  D++                           
Sbjct: 61  RLLSTAGRSVPVLAVVSEGGLVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQ 120

Query: 136 ---GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
              G +  G+L I   + T  + G  L LT  EF L  +L +HAG+ FTR +L+HEVWGY
Sbjct: 121 ESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY 180

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           D  G  RTVDVHVRRLRAKLG ++E+++ TVR VGY AV P
Sbjct: 181 DFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRP 221


>tr|B5GEX4|B5GEX4_9ACTO Tax_Id=465543 SubName: Full=Two-component
           system response regulator;[Streptomyces sp. SPB74]
          Length = 266

 Score =  134 bits (336), Expect = 1e-29
 Identities = 87/249 (34%), Positives = 119/249 (47%), Gaps = 16/249 (6%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPP---DWAGPDVAMIDARSDLATARST 75
           +LLL+NA   + +   L +   ++ + R+  A  P   D  G DV ++D R DL   RS 
Sbjct: 4   LLLLTNA--LQPSTEVLPALGLLLHNVRVAPAEGPALVDTPGADVILVDGRRDLPQVRSL 61

Query: 76  CRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK 135
           C+ L +  P               +  DW  DDV                          
Sbjct: 62  CQLLRSTGPGCPLLLVVTEGGLAAVTADWGVDDVLLDTAGPAEVEARLRLATGRRQNAAD 121

Query: 136 GT---LEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
            +   +  GDL++   + +  + G  L LT  EF L  +L +H G+ FTR +L+ EVWGY
Sbjct: 122 DSPMEIRNGDLSVDEATYSAKLKGRVLDLTFKEFELLKYLAQHPGRVFTRAQLLQEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLP--RWTARQP-----VL 245
           D  G  RTVDVHVRRLRAKLG +HES++ TVR VGY  VTP  P    T + P       
Sbjct: 182 DYFGGTRTVDVHVRRLRAKLGPEHESLIGTVRNVGYRFVTPEKPERERTEKNPAGPATAE 241

Query: 246 SPG-SGPEP 253
           +PG +GPEP
Sbjct: 242 TPGDAGPEP 250


>tr|C8XA56|C8XA56_NAKMY Tax_Id=479431 SubName: Full=Putative two
           component transcriptional regulator, winged helix
           family;[Nakamurella multipartita]
          Length = 232

 Score =  133 bits (335), Expect = 2e-29
 Identities = 83/218 (38%), Positives = 107/218 (49%), Gaps = 1/218 (0%)

Query: 17  LRVLLLSNAADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTC 76
           + +LLL+      S LP +      I+ A  +AA        D+ ++DAR DLA AR+ C
Sbjct: 1   MELLLLTTDPSPTSVLPAVDLLPIRIRSAAPEAASLVTSGPYDLLLLDARHDLAAARTLC 60

Query: 77  RRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK- 135
           R L A+  +            V I  +W   DV                           
Sbjct: 61  RLLGADGLAVSILAIVTEGGMVAIGPEWGVSDVVLASAGPAEVHARLRLLAARTSNSANS 120

Query: 136 GTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYDCN 195
           G +  GDL I  D+ T  + G  L LT  EF L  FL +H G+ FTR +L+ EVWGYD  
Sbjct: 121 GLISLGDLTIEEDTYTARLRGRPLELTYKEFELLKFLAQHPGRVFTREQLVTEVWGYDFF 180

Query: 196 GRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTP 233
           G  RTVDVHVRRLRAKLGA+HE+++ TVR VGY  V P
Sbjct: 181 GGTRTVDVHVRRLRAKLGAEHEALIGTVRNVGYKMVPP 218


>tr|Q2JFW3|Q2JFW3_FRASC Tax_Id=106370 SubName: Full=Response
           regulator receiver protein;[Frankia sp.]
          Length = 250

 Score =  131 bits (330), Expect = 7e-29
 Identities = 83/235 (35%), Positives = 111/235 (47%), Gaps = 9/235 (3%)

Query: 19  VLLLSNA-ADFESTLPTLKSFASVIQHARLDAAGPPDWAGPDVAMIDARSDLATARSTCR 77
           VLLL+NA      + P+L      ++ A L+A+   D    DV ++D R +L  AR  CR
Sbjct: 4   VLLLTNAPGPSAESFPSLGLLTHTVRVAPLEASALLDAPPVDVIVVDGRRELVIARGLCR 63

Query: 78  RLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXX--- 134
            L     +              +  DW  DDV                            
Sbjct: 64  LLRTTGLTTPLLALVTEGGLAAVSADWGVDDVVLDSAGPAEVEARLRLAIGRVAAAGGTA 123

Query: 135 -KGTLEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGYD 193
             G +  GDL++   + +  + G  L LT  EF L  +L +H G+ FTR +L+ EVWGYD
Sbjct: 124 EAGVIRSGDLSVDETTYSAKLRGRPLELTFKEFELLKYLAQHPGRVFTRAQLLQEVWGYD 183

Query: 194 CNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPLPRWTARQPVLSPG 248
             G  RTVDVHVRRLRAKLG +HE+M+ TVR VGY  V PP+    A  P  +PG
Sbjct: 184 YYGGTRTVDVHVRRLRAKLGPEHEAMIGTVRHVGYKFVAPPI----APLPENTPG 234


>tr|B5HLW3|B5HLW3_9ACTO Tax_Id=463191 SubName: Full=Transcriptional
           regulatory protein;[Streptomyces sviceus ATCC 29083]
          Length = 255

 Score =  131 bits (330), Expect = 7e-29
 Identities = 88/254 (34%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 19  VLLLSNAADFESTLPTLKSFASVIQHARLDAAGPP---DWAGPDVAMIDARSDLATARST 75
           +LLL+NA   + +   L +   ++ + R+  A  P   D  G DV +ID R DL   RS 
Sbjct: 4   LLLLTNA--LQPSTEVLPALGLLLHNVRVAPAEGPALVDTPGADVILIDGRRDLPQVRSL 61

Query: 76  CRRLTANAPSXXXXXXXXXXDFVDIDIDWHFDDVXXXXXXXXXXXXXXXXXXXXXXXXXK 135
           C+ L +  P               +  DW  DDV                          
Sbjct: 62  CQLLRSTGPGCPLILVVTEGGLAAVTADWGIDDVLLDTAGPAEVEARLRLAMGRQQIVSD 121

Query: 136 GT---LEFGDLAIHPDSCTVTVAGEALGLTLTEFRLFHFLVRHAGQAFTRTRLMHEVWGY 192
            +   +  GDL++   + +  + G  L LT  EF L  +L +H G+ FTR +L+ EVWGY
Sbjct: 122 DSPMEIRNGDLSVDEATYSAKLKGRVLDLTFKEFELLKYLAQHPGRVFTRAQLLQEVWGY 181

Query: 193 DCNGRARTVDVHVRRLRAKLGADHESMVDTVRGVGYMAVTPPL-PRWTARQPVLSPGSGP 251
           D  G  RTVDVHVRRLRAKLG +HES++ TVR VGY  VTP    R T      +  +  
Sbjct: 182 DYFGGTRTVDVHVRRLRAKLGPEHESLIGTVRNVGYRFVTPEKGERVTDEAKAKADRAKT 241

Query: 252 EPQDISVPTEQVLA 265
           E  D SV  E V A
Sbjct: 242 EDVDESVTLEDVEA 255


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.323    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,727,371,876
Number of extensions: 60617100
Number of successful extensions: 172555
Number of sequences better than 10.0: 18331
Number of HSP's gapped: 169089
Number of HSP's successfully gapped: 18393
Length of query: 266
Length of database: 3,846,993,858
Length adjustment: 135
Effective length of query: 131
Effective length of database: 2,324,841,453
Effective search space: 304554230343
Effective search space used: 304554230343
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)