BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2048 (247 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HM34|B2HM34_MYCMM Tax_Id=216594 (clpC2)SubName: Full=ATP-de... 384 e-105 tr|A0PT24|A0PT24_MYCUA Tax_Id=362242 (clpC2)SubName: Full=ATP-de... 370 e-100 sp|P0A525|Y2686_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 289 2e-76 sp|P0A524|Y2667_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 289 2e-76 tr|C6DLP0|C6DLP0_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent... 289 2e-76 tr|C1AFC6|C1AFC6_MYCBT Tax_Id=561275 (clpX')SubName: Full=Putati... 289 2e-76 tr|A5U619|A5U619_MYCTA Tax_Id=419947 (clpC2)SubName: Full=Putati... 289 2e-76 tr|A1KM05|A1KM05_MYCBP Tax_Id=410289 (clpX')SubName: Full=Possib... 289 2e-76 tr|A5WQS0|A5WQS0_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent... 289 2e-76 tr|A4KJV3|A4KJV3_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent... 289 2e-76 tr|A2VL13|A2VL13_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent... 289 2e-76 tr|Q73W73|Q73W73_MYCPA Tax_Id=1770 (clpX')SubName: Full=ClpX';[M... 271 4e-71 tr|A0QIJ9|A0QIJ9_MYCA1 Tax_Id=243243 SubName: Full=Putative ATP-... 269 2e-70 tr|Q1B9V1|Q1B9V1_MYCSS Tax_Id=164756 SubName: Full=Clp, N termin... 256 2e-66 tr|A3PYM3|A3PYM3_MYCSJ Tax_Id=164757 SubName: Full=Clp N termina... 256 2e-66 tr|A1UF61|A1UF61_MYCSK Tax_Id=189918 SubName: Full=Clp N termina... 256 2e-66 tr|A0QW35|A0QW35_MYCS2 Tax_Id=246196 SubName: Full=Clp amino ter... 254 5e-66 tr|A8L6Y7|A8L6Y7_FRASN Tax_Id=298653 SubName: Full=Clp domain pr... 232 3e-59 tr|Q0SK57|Q0SK57_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-... 231 5e-59 tr|A1T809|A1T809_MYCVP Tax_Id=350058 SubName: Full=Clp N termina... 231 5e-59 tr|C0ZS13|C0ZS13_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 229 3e-58 tr|C1ARE5|C1ARE5_RHOOB Tax_Id=632772 SubName: Full=Putative unch... 228 6e-58 tr|C3JFV5|C3JFV5_RHOER Tax_Id=596309 SubName: Full=Clp amino dom... 227 1e-57 tr|A4TCT7|A4TCT7_MYCGI Tax_Id=350054 SubName: Full=Clp N termina... 225 3e-57 tr|C9Z0X4|C9Z0X4_STRSW Tax_Id=680198 SubName: Full=Putative unch... 224 7e-57 tr|A4FEV4|A4FEV4_SACEN Tax_Id=405948 (clpX2)SubName: Full=Putati... 220 1e-55 tr|C9NGP3|C9NGP3_9ACTO Tax_Id=591167 SubName: Full=Clp domain pr... 218 4e-55 tr|C8XC43|C8XC43_NAKMY Tax_Id=479431 SubName: Full=Clp domain pr... 218 6e-55 tr|A8M715|A8M715_SALAI Tax_Id=391037 SubName: Full=Clp domain pr... 216 2e-54 tr|C7MWY2|C7MWY2_SACVD Tax_Id=471857 SubName: Full=Clp amino ter... 210 1e-52 tr|A4X4L1|A4X4L1_SALTO Tax_Id=369723 SubName: Full=Clp N termina... 208 5e-52 tr|B1VV99|B1VV99_STRGG Tax_Id=455632 (clpX)SubName: Full=Putativ... 206 1e-51 tr|Q9X8L2|Q9X8L2_STRCO Tax_Id=1902 SubName: Full=Putative unchar... 206 2e-51 tr|C4RR89|C4RR89_9ACTO Tax_Id=219305 SubName: Full=Putative unch... 204 5e-51 tr|Q5YNW2|Q5YNW2_NOCFA Tax_Id=37329 (clpX2)SubName: Full=Putativ... 196 2e-48 tr|Q82EH8|Q82EH8_STRAW Tax_Id=33903 (clpX1)SubName: Full=Putativ... 167 7e-40 tr|Q93HB2|Q93HB2_STRAW Tax_Id=33903 (clpX)SubName: Full=ClpX hom... 165 4e-39 tr|D0LEM0|D0LEM0_GORB4 Tax_Id=526226 SubName: Full=Clp domain pr... 157 1e-36 tr|C6WCD8|C6WCD8_ACTMD Tax_Id=446462 SubName: Full=Clp domain pr... 135 4e-30 tr|B1MHD1|B1MHD1_MYCA9 Tax_Id=561007 SubName: Full=Putative Clp ... 132 3e-29 tr|C4DPW3|C4DPW3_9ACTO Tax_Id=446470 SubName: Full=Clp amino ter... 122 5e-26 tr|C7QJ13|C7QJ13_CATAD Tax_Id=479433 SubName: Full=Clp domain pr... 119 4e-25 tr|A4TGI5|A4TGI5_MYCGI Tax_Id=350054 SubName: Full=Clp N termina... 85 6e-15 tr|C1WVY0|C1WVY0_9ACTO Tax_Id=479435 SubName: Full=Clp amino ter... 77 1e-12 tr|B5GF24|B5GF24_9ACTO Tax_Id=465543 SubName: Full=Truncated clp... 75 7e-12 tr|C2BSH3|C2BSH3_9ACTO Tax_Id=548479 SubName: Full=ATPase with c... 65 9e-09 tr|D0YPF8|D0YPF8_9ACTO Tax_Id=596328 (clpC)SubName: Full=Negativ... 64 1e-08 tr|C2KSF5|C2KSF5_9ACTO Tax_Id=585199 SubName: Full=ATPase with c... 64 1e-08 tr|A7BBJ6|A7BBJ6_9ACTO Tax_Id=411466 SubName: Full=Putative unch... 62 4e-08 tr|C0VYU9|C0VYU9_9ACTO Tax_Id=525245 SubName: Full=ATPase with c... 61 1e-07 >tr|B2HM34|B2HM34_MYCMM Tax_Id=216594 (clpC2)SubName: Full=ATP-dependent protease ATP-binding subunit ClpC2;[Mycobacterium marinum] Length = 247 Score = 384 bits (985), Expect = e-105 Identities = 202/247 (81%), Positives = 203/247 (82%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 +AESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG Sbjct: 1 MAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTP D Sbjct: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPRARSAVVAAQNAAHQGAND 120 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL 180 EITPDHLLLGV RMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL Sbjct: 121 EITPDHLLLGVLADPAALATALLRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL 180 Query: 181 ELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGP 240 ELTFREALRLGHNYIGTEHM HRSGVEKSRAEADLSSALESLTGHGP Sbjct: 181 ELTFREALRLGHNYIGTEHMLLALLELEDGAGPLHRSGVEKSRAEADLSSALESLTGHGP 240 Query: 241 DSRPGKS 247 DSRPGKS Sbjct: 241 DSRPGKS 247 >tr|A0PT24|A0PT24_MYCUA Tax_Id=362242 (clpC2)SubName: Full=ATP-dependent protease ATP-binding subunit ClpC2;[Mycobacterium ulcerans] Length = 247 Score = 370 bits (949), Expect = e-100 Identities = 196/247 (79%), Positives = 198/247 (80%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 +A+ TKITYPVRLDELIDAIKQVHTNAL QLTDAVLAAEHLGEIADHLIGHFVDQAR SG Sbjct: 1 MADPTKITYPVRLDELIDAIKQVHTNALGQLTDAVLAAEHLGEIADHLIGHFVDQARGSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 ASWTDIGKSMGVTKQAAQKRFV RAEATTLDPEQGFGRFTP D Sbjct: 61 ASWTDIGKSMGVTKQAAQKRFVLRAEATTLDPEQGFGRFTPRARSAVVAAQNAAHQGAND 120 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL 180 EITPDHLLLGV RMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL Sbjct: 121 EITPDHLLLGVLADPAALATALLRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVL 180 Query: 181 ELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGP 240 ELTFREALRLGHNYIGTEHM HRSGVEKSRAEADLSSALESLTGHGP Sbjct: 181 ELTFREALRLGHNYIGTEHMLLALLELEDGAGPLHRSGVEKSRAEADLSSALESLTGHGP 240 Query: 241 DSRPGKS 247 D RPGKS Sbjct: 241 DGRPGKS 247 >sp|P0A525|Y2686_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb2686;[Mycobacterium bovis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >sp|P0A524|Y2667_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv2667/MT2741;[Mycobacterium tuberculosis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|C6DLP0|C6DLP0_MYCTK Tax_Id=478434 SubName: Full=ATP-dependent protease ATP-binding subunit clpC2;[Mycobacterium tuberculosis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|C1AFC6|C1AFC6_MYCBT Tax_Id=561275 (clpX')SubName: Full=Putative ATP-dependent protease ATP-binding subunit;[Mycobacterium bovis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGATSSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|A5U619|A5U619_MYCTA Tax_Id=419947 (clpC2)SubName: Full=Putative ATP-dependent protease ATP-binding subunit ClpC2;[Mycobacterium tuberculosis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|A1KM05|A1KM05_MYCBP Tax_Id=410289 (clpX')SubName: Full=Possible ATP-dependent protease ATP-binding subunit clpX'; EC=3.4.-.-;[Mycobacterium bovis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGATSSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|A5WQS0|A5WQS0_MYCTF Tax_Id=336982 SubName: Full=ATP-dependent protease ATP-binding subunit clpC2;[Mycobacterium tuberculosis] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|A4KJV3|A4KJV3_MYCTU Tax_Id=395095 SubName: Full=ATP-dependent protease ATP-binding subunit clpC2;[Mycobacterium tuberculosis str. Haarlem] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|A2VL13|A2VL13_MYCTU Tax_Id=348776 SubName: Full=ATP-dependent protease ATP-binding subunit clpC2;[Mycobacterium tuberculosis C] Length = 252 Score = 289 bits (740), Expect = 2e-76 Identities = 155/235 (65%), Positives = 166/235 (70%) Query: 3 ESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 E T YPVRLDELI+AIK+VH++ LDQL+DAVLAAEHLGEIADHLIGHFVDQARRSGAS Sbjct: 3 EPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 Query: 63 WTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 W+DIGKSMGVTKQAAQKRFVPRAEATTLD QGF RFTP EI Sbjct: 63 WSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEI 122 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 TPDHLLLGV + Q ID LR +V LP A E P IPFSGPARKVLEL Sbjct: 123 TPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLEL 182 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFREALRLGHNYIGTEH+ HRSGV+KSRAEADL + L SLTG Sbjct: 183 TFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTG 237 >tr|Q73W73|Q73W73_MYCPA Tax_Id=1770 (clpX')SubName: Full=ClpX';[Mycobacterium paratuberculosis] Length = 250 Score = 271 bits (694), Expect = 4e-71 Identities = 150/250 (60%), Positives = 169/250 (67%), Gaps = 6/250 (2%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 ++E +I +PVRLDELIDAIK H + LDQL DAVLAAEHLGE+ADHLIGHFVDQARRSG Sbjct: 1 MSEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 ASWTDIGKSMGV+KQAAQKRFVPR EAT LDP QGF RFTP Sbjct: 61 ASWTDIGKSMGVSKQAAQKRFVPR-EATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNR 119 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALR----ASVRLPAATGETPALIPFSGPA 176 EITPDHLL+GV R+Q +DT+ALR A++ A G+ PALIPFSGPA Sbjct: 120 EITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAIAALRADGDPPALIPFSGPA 179 Query: 177 RKVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLT 236 RKVLELT REALRLGHNY+GTEH HR GV+K R E DL ALESL Sbjct: 180 RKVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESL- 238 Query: 237 GHGPDSRPGK 246 G+G + G+ Sbjct: 239 GNGKNVGAGE 248 >tr|A0QIJ9|A0QIJ9_MYCA1 Tax_Id=243243 SubName: Full=Putative ATP-dependent Clp protease ATP-binding subunit;[Mycobacterium avium] Length = 250 Score = 269 bits (687), Expect = 2e-70 Identities = 150/250 (60%), Positives = 167/250 (66%), Gaps = 6/250 (2%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 ++E +I + VRLDELIDAIK H + LDQL DAVLAAEHLGE+ADHLIGHFVDQARRSG Sbjct: 1 MSEPIRIAHSVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 ASWTDIGKSMGV+KQAAQKRFVPR EAT LDP QGF RFTP Sbjct: 61 ASWTDIGKSMGVSKQAAQKRFVPR-EATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNR 119 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALR----ASVRLPAATGETPALIPFSGPA 176 EITPDHLL+GV R+Q +DT+ALR AS+ A G+ PALIPFSGPA Sbjct: 120 EITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATASIAALRADGDPPALIPFSGPA 179 Query: 177 RKVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLT 236 RKVLELT REALRLGHNY+GTEH HR GV+K R E DL ALESL Sbjct: 180 RKVLELTVREALRLGHNYVGTEHQLLALLELEDGDGLLHRGGVDKERVEVDLIRALESL- 238 Query: 237 GHGPDSRPGK 246 G G + G+ Sbjct: 239 GSGKNVGAGE 248 >tr|Q1B9V1|Q1B9V1_MYCSS Tax_Id=164756 SubName: Full=Clp, N terminal;[Mycobacterium sp.] Length = 240 Score = 256 bits (654), Expect = 2e-66 Identities = 137/236 (58%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 I +PVRLD+LI+AIK VH LDQLTDAVLAAE LGE+ADHLIGHFVDQARRSGASWTDI Sbjct: 5 IAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDI 64 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDH 126 GK MGVTKQAAQKRFVP+A+ LDP QGF RFTP EITPDH Sbjct: 65 GKCMGVTKQAAQKRFVPKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDH 124 Query: 127 LLLGVXXXXXXXXXXXXRMQAIDTEALRASVRL-PAATGETPALIPFSGPARKVLELTFR 185 LLLG+ Q + + +RA+V L P+A G L+PFSGPA+KVLELTFR Sbjct: 125 LLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSADGPALDLVPFSGPAKKVLELTFR 184 Query: 186 EALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGPD 241 EALRLGHNYIGTEH+ R GV++ RA+ DL L+S+TG G D Sbjct: 185 EALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD 240 >tr|A3PYM3|A3PYM3_MYCSJ Tax_Id=164757 SubName: Full=Clp N terminal domain protein;[Mycobacterium sp.] Length = 240 Score = 256 bits (654), Expect = 2e-66 Identities = 137/236 (58%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 I +PVRLD+LI+AIK VH LDQLTDAVLAAE LGE+ADHLIGHFVDQARRSGASWTDI Sbjct: 5 IAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDI 64 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDH 126 GK MGVTKQAAQKRFVP+A+ LDP QGF RFTP EITPDH Sbjct: 65 GKCMGVTKQAAQKRFVPKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDH 124 Query: 127 LLLGVXXXXXXXXXXXXRMQAIDTEALRASVRL-PAATGETPALIPFSGPARKVLELTFR 185 LLLG+ Q + + +RA+V L P+A G L+PFSGPA+KVLELTFR Sbjct: 125 LLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSADGPALDLVPFSGPAKKVLELTFR 184 Query: 186 EALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGPD 241 EALRLGHNYIGTEH+ R GV++ RA+ DL L+S+TG G D Sbjct: 185 EALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD 240 >tr|A1UF61|A1UF61_MYCSK Tax_Id=189918 SubName: Full=Clp N terminal domain protein;[Mycobacterium sp.] Length = 240 Score = 256 bits (654), Expect = 2e-66 Identities = 137/236 (58%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 I +PVRLD+LI+AIK VH LDQLTDAVLAAE LGE+ADHLIGHFVDQARRSGASWTDI Sbjct: 5 IAHPVRLDDLINAIKTVHDEPLDQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWTDI 64 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDH 126 GK MGVTKQAAQKRFVP+A+ LDP QGF RFTP EITPDH Sbjct: 65 GKCMGVTKQAAQKRFVPKADTEPLDPNQGFARFTPRARAAVVHAQNTAREARHSEITPDH 124 Query: 127 LLLGVXXXXXXXXXXXXRMQAIDTEALRASVRL-PAATGETPALIPFSGPARKVLELTFR 185 LLLG+ Q + + +RA+V L P+A G L+PFSGPA+KVLELTFR Sbjct: 125 LLLGLLVDTESLGVALLTAQGVAPQDVRAAVALTPSADGPALDLVPFSGPAKKVLELTFR 184 Query: 186 EALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGPD 241 EALRLGHNYIGTEH+ R GV++ RA+ DL L+S+TG G D Sbjct: 185 EALRLGHNYIGTEHLLLALLESEDTDGPLSRLGVDRQRAQTDLIGLLDSITGAGTD 240 >tr|A0QW35|A0QW35_MYCS2 Tax_Id=246196 SubName: Full=Clp amino terminal domain protein;[Mycobacterium smegmatis] Length = 244 Score = 254 bits (650), Expect = 5e-66 Identities = 136/236 (57%), Positives = 157/236 (66%), Gaps = 3/236 (1%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 + E KIT PVRLD+LID IK HT L+QLTDAV+AA+ LGEIADHLIGHFVDQARRSG Sbjct: 1 MVEHAKITNPVRLDDLIDGIKHAHTEPLEQLTDAVIAADALGEIADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRA---EATTLDPEQGFGRFTPXXXXXXXXXXXXXXXX 117 ASWT+IGK MGVTKQAAQKRFVP+ + T L+PE+GFGRFTP Sbjct: 61 ASWTEIGKCMGVTKQAAQKRFVPKVPDFDPTALNPEEGFGRFTPRARNVIVVAHNLAHDA 120 Query: 118 XXDEITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPAR 177 EITPDHLLLG+ Q +D +A+RA+V LP +TGE ALIPF A+ Sbjct: 121 RNAEITPDHLLLGLFADTEGLAAKLLAGQGVDADAVRAAVTLPPSTGEAAALIPFDTAAK 180 Query: 178 KVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALE 233 K LELTFR+ALRLGHNYIGTEH+ HR GV+ R EADL +ALE Sbjct: 181 KALELTFRQALRLGHNYIGTEHILLALVDAEDGDGPLHRLGVDAERFEADLRTALE 236 >tr|A8L6Y7|A8L6Y7_FRASN Tax_Id=298653 SubName: Full=Clp domain protein;[Frankia sp.] Length = 257 Score = 232 bits (591), Expect = 3e-59 Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 4/234 (1%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 I+ PVRLD+LI AIK+ H++ALDQLTDAV+ A+HLGE+ADHLIGHFVDQARRSGASWT+I Sbjct: 9 ISNPVRLDDLIAAIKKAHSDALDQLTDAVMVADHLGEVADHLIGHFVDQARRSGASWTEI 68 Query: 67 GKSMGVTKQAAQKRFVPR--AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITP 124 G SMGVTKQAAQKRFVP+ E ++LDP QGFGR+TP EITP Sbjct: 69 GASMGVTKQAAQKRFVPKGPGEPSSLDPSQGFGRYTPRARNSIVAAQNETRAAGNAEITP 128 Query: 125 DHLLLGVXXXXXXXXXXXXRMQAIDTEALRASV--RLPAATGETPALIPFSGPARKVLEL 182 HL+LG+ Q + +A+R +V LP + PALIPF GP++K LEL Sbjct: 129 GHLILGLLADPQGLGPAAIAAQEVSLDAVRQAVTAALPPRVDDLPALIPFDGPSKKALEL 188 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLT 236 TFREALRLGHNY+GTEH+ GV+K+ E L+ AL +T Sbjct: 189 TFREALRLGHNYVGTEHILLALLELEDGTGPLTALGVDKATVETYLAEALSLIT 242 >tr|Q0SK57|Q0SK57_RHOSR Tax_Id=101510 SubName: Full=Probable ATP-dependent Clp protease ATP-binding subunit;[Rhodococcus sp.] Length = 247 Score = 231 bits (589), Expect = 5e-59 Identities = 127/237 (53%), Positives = 155/237 (65%), Gaps = 5/237 (2%) Query: 4 STKITYPVRLDELIDAIKQVHTNA-LDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 S + T P+RLDELIDAIK+VH A L+QLTDAVLAAEHLGE+ADHLIGHFVDQARRSGAS Sbjct: 4 SDRTTPPIRLDELIDAIKKVHAEAPLEQLTDAVLAAEHLGELADHLIGHFVDQARRSGAS 63 Query: 63 WTDIGKSMGVTKQAAQKRFVPR--AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 WT+IGKSMGVTKQAAQKRFVP+ +A+ LDP QGF RFTP Sbjct: 64 WTEIGKSMGVTKQAAQKRFVPKDPGQASDLDPNQGFSRFTPRARQVVVVAQNEARAAHNA 123 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARK 178 EI P HL+LG+ Q + +++R A+ LP A E PAL+PF +RK Sbjct: 124 EILPQHLVLGLLADPEGLGARAIAAQGVKLDSVRHAATATLPPAAEEVPALVPFDAQSRK 183 Query: 179 VLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 LELTFREALRLGHNYIGTEH+ GV+K+ AE ++++ L+++ Sbjct: 184 ALELTFREALRLGHNYIGTEHILLALLEVEDGVGVLTGLGVDKAAAEENIAANLDAI 240 >tr|A1T809|A1T809_MYCVP Tax_Id=350058 SubName: Full=Clp N terminal domain protein;[Mycobacterium vanbaalenii] Length = 239 Score = 231 bits (589), Expect = 5e-59 Identities = 124/235 (52%), Positives = 147/235 (62%), Gaps = 2/235 (0%) Query: 5 TKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWT 64 +KI++PVRLD+LID IKQVH L+QLTDAVLAAE LGE+ADHLIGHFVDQARRSGASWT Sbjct: 4 SKISHPVRLDDLIDVIKQVHDEPLEQLTDAVLAAEALGEVADHLIGHFVDQARRSGASWT 63 Query: 65 DIGKSMGVTKQAAQKRFVPRAEATT--LDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEI 122 +IGK MGVTKQAAQKRFVP+ T LDP+ GF RFTP EI Sbjct: 64 EIGKCMGVTKQAAQKRFVPKTPTDTGALDPDAGFSRFTPRARAVIVEAQNKAHDAGNPEI 123 Query: 123 TPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARKVLEL 182 P HL+LG+ Q +D A+ + LPA PALIPF A+K LEL Sbjct: 124 LPAHLILGMFADPTGLAARLVAGQGVDLAAVADHITLPARVDGVPALIPFDTRAKKALEL 183 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 TFR+ALRLGHNY+GTEH+ H G++ R E +L ALE+ +G Sbjct: 184 TFRQALRLGHNYVGTEHLLLALYEEEDDDGVLHGLGIDFDRFERELREALEAFSG 238 >tr|C0ZS13|C0ZS13_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 242 Score = 229 bits (583), Expect = 3e-58 Identities = 124/236 (52%), Positives = 156/236 (66%), Gaps = 4/236 (1%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 +++ ++T VRLD+LIDAIK+VHT+ALDQL+DAV+AA+HLGE+ADHLIGHFVDQARRSG Sbjct: 1 MSKPVEMTNKVRLDDLIDAIKKVHTDALDQLSDAVIAADHLGEVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPR--AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXX 118 ASWT+IG SMGV+KQAAQKRFVP+ ++ +DP +GF RFTP Sbjct: 61 ASWTEIGASMGVSKQAAQKRFVPKVPSDQKPMDPNEGFNRFTPRAKNVVMASQNEARAAG 120 Query: 119 XDEITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVR--LPAATGETPALIPFSGPA 176 EI P+HLLLG+ Q ++ ++RA+V LPA T E P LIP+ A Sbjct: 121 NAEIQPEHLLLGLVEEPAGLAAKAIVAQGVELRSVRAAVAGVLPAPTSELPELIPYDARA 180 Query: 177 RKVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSAL 232 RKVLELTFREALRLGHNYIGTEH+ G+ KS AE+++ AL Sbjct: 181 RKVLELTFREALRLGHNYIGTEHILLALLELEDGSGVLADLGISKSVAESNIVGAL 236 >tr|C1ARE5|C1ARE5_RHOOB Tax_Id=632772 SubName: Full=Putative uncharacterized protein;[Rhodococcus opacus] Length = 247 Score = 228 bits (580), Expect = 6e-58 Identities = 125/237 (52%), Positives = 153/237 (64%), Gaps = 5/237 (2%) Query: 4 STKITYPVRLDELIDAIKQVHTNA-LDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGAS 62 ST +T P+RLD+LI+AIK+ H A L+QLTDAVLAAEHLG++ADHLIGHFVDQARRSGAS Sbjct: 4 STPVTPPIRLDDLIEAIKKGHAEAPLEQLTDAVLAAEHLGDLADHLIGHFVDQARRSGAS 63 Query: 63 WTDIGKSMGVTKQAAQKRFVPR--AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXD 120 WT+IGKSMGVTKQAAQKRFVP+ +A+ LDP QGF RFTP Sbjct: 64 WTEIGKSMGVTKQAAQKRFVPKDPGQASDLDPNQGFSRFTPRARQVVVVAQNEARAASNS 123 Query: 121 EITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARK 178 EI P HL+LG+ Q +D + +R A+ LP A E PALIPF +RK Sbjct: 124 EILPQHLVLGLLTDPDGLGARAIAAQGVDLDTVRHAATATLPPAVEEIPALIPFDAQSRK 183 Query: 179 VLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 LELTFREALRLGHNYIGTEH+ GV+K+ E ++++ L ++ Sbjct: 184 ALELTFREALRLGHNYIGTEHILLALLEVEDGVGVLAGLGVDKAAVEENIAANLAAI 240 >tr|C3JFV5|C3JFV5_RHOER Tax_Id=596309 SubName: Full=Clp amino domain protein;[Rhodococcus erythropolis SK121] Length = 238 Score = 227 bits (578), Expect = 1e-57 Identities = 124/231 (53%), Positives = 152/231 (65%), Gaps = 4/231 (1%) Query: 6 KITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTD 65 ++T VRLD+LIDAIK+VHT+ALDQL+DAV+AA+HLGE+ADHLIGHFVDQARRSGASWT+ Sbjct: 2 EMTNKVRLDDLIDAIKKVHTDALDQLSDAVIAADHLGEVADHLIGHFVDQARRSGASWTE 61 Query: 66 IGKSMGVTKQAAQKRFVPRA--EATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEIT 123 IG SMGV+KQAAQKRFVP+A + +DP +GF RFTP EI Sbjct: 62 IGASMGVSKQAAQKRFVPKAPSDQKPMDPNEGFNRFTPRAKNVVMASQNEARAAGNAEIQ 121 Query: 124 PDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVR--LPAATGETPALIPFSGPARKVLE 181 P+HLLLG+ Q ++ ++RA+V LP T E P LIP+ ARKVLE Sbjct: 122 PEHLLLGLVEEPAGLAAKAIVAQGVELGSVRAAVAGVLPTPTSELPELIPYDARARKVLE 181 Query: 182 LTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSAL 232 LTFREALRLGHNYIGTEH+ G+ KS AE+++ AL Sbjct: 182 LTFREALRLGHNYIGTEHILLALLELEDGSGVLADLGISKSVAESNIVGAL 232 >tr|A4TCT7|A4TCT7_MYCGI Tax_Id=350054 SubName: Full=Clp N terminal domain protein;[Mycobacterium gilvum] Length = 240 Score = 225 bits (574), Expect = 3e-57 Identities = 121/239 (50%), Positives = 147/239 (61%), Gaps = 2/239 (0%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 ++++ KI+ PVRLD+LI+ I +VH LDQLTDAVLAAE L ++ADHLIGHFVDQARRSG Sbjct: 1 MSDAAKISRPVRLDDLIEVITRVHDEPLDQLTDAVLAAEALDDVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAEATT--LDPEQGFGRFTPXXXXXXXXXXXXXXXXX 118 ASWT+IGK MGVTKQAAQKRFVP+ T LDP+ GF RFT Sbjct: 61 ASWTEIGKCMGVTKQAAQKRFVPKTPTDTAALDPDAGFSRFTERARAAVVHAQNEAHAAG 120 Query: 119 XDEITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPARK 178 EI P HL+LG+ Q I + +R + LPA + + PAL+PF G A+K Sbjct: 121 NGEIAPAHLVLGLFSDPSGLAAQLVAAQGIALDGIRDRIVLPARSEDVPALVPFDGRAKK 180 Query: 179 VLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 LELTFR ALRLGHNYIGTEH+ H G++ R E DL AL+ L G Sbjct: 181 ALELTFRHALRLGHNYIGTEHLLLALYEEEDADGVLHGVGIDAERFERDLRQALDGLPG 239 >tr|C9Z0X4|C9Z0X4_STRSW Tax_Id=680198 SubName: Full=Putative uncharacterized protein;[Streptomyces scabies] Length = 247 Score = 224 bits (571), Expect = 7e-57 Identities = 125/232 (53%), Positives = 145/232 (62%), Gaps = 3/232 (1%) Query: 6 KITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTD 65 + T +RLDELIDAIK+VH LDQL DAV+AA+HLGE+ADHLIGHFVDQARRSGASWT+ Sbjct: 6 RATASIRLDELIDAIKKVHPEPLDQLQDAVIAADHLGEVADHLIGHFVDQARRSGASWTE 65 Query: 66 IGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPD 125 IGKSMGVT+QAAQKRFVP+AE LD QGF RFTP E P Sbjct: 66 IGKSMGVTRQAAQKRFVPKAE-NDLDASQGFSRFTPRARNVVTAAHNEGKAAGAVEGVPA 124 Query: 126 HLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLELT 183 HL+LG+ Q + E LR A+ LP A E P LIP+ A+KVLELT Sbjct: 125 HLVLGLLSEPEALAAKALAAQGVSPEVLRQAATATLPPAAPEVPELIPYGPEAKKVLELT 184 Query: 184 FREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 FREALRLGHNYIGTEH+ GV K EAD+++AL S+ Sbjct: 185 FREALRLGHNYIGTEHILLALLEFENGQGVLSGLGVTKEATEADVTAALRSI 236 >tr|A4FEV4|A4FEV4_SACEN Tax_Id=405948 (clpX2)SubName: Full=Putative Clp protease subunit;[Saccharopolyspora erythraea] Length = 235 Score = 220 bits (561), Expect = 1e-55 Identities = 120/227 (52%), Positives = 144/227 (63%), Gaps = 2/227 (0%) Query: 11 VRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 VRLD+LI+AIK+VH + L+QL+ AV+A EHLGE+ADHLIGHFVDQARRSGASWT+IG+SM Sbjct: 5 VRLDDLIEAIKKVHPDVLEQLSGAVVAGEHLGEVADHLIGHFVDQARRSGASWTEIGRSM 64 Query: 71 GVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLG 130 GV+KQAAQKRFV + EA LDP QGF RFT DEI P HL+L Sbjct: 65 GVSKQAAQKRFVAKGEALDLDPSQGFSRFTDRARSVVVAAQSQARAASNDEIQPAHLVLA 124 Query: 131 VXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLELTFREAL 188 + Q ++ EA + S LP A P LIPF ARK LELTFREAL Sbjct: 125 LLGESEALAAKAVVAQGVELEAAKREVSAALPPAVERVPDLIPFDPQARKALELTFREAL 184 Query: 189 RLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 RLGHNYIGTEH+ R GV+K+ AEA++ +AL+ L Sbjct: 185 RLGHNYIGTEHILLALLELEDGAGVLSRLGVDKAAAEANIVAALDEL 231 >tr|C9NGP3|C9NGP3_9ACTO Tax_Id=591167 SubName: Full=Clp domain protein;[Streptomyces flavogriseus ATCC 33331] Length = 247 Score = 218 bits (556), Expect = 4e-55 Identities = 120/238 (50%), Positives = 153/238 (64%), Gaps = 5/238 (2%) Query: 10 PVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKS 69 P+RLD+LI+ IK+ HT+AL+QL+DAV+AA+HLGEIADHLIGHFVDQARRSGASWTDIG+S Sbjct: 10 PIRLDDLIEGIKKTHTDALEQLSDAVVAADHLGEIADHLIGHFVDQARRSGASWTDIGRS 69 Query: 70 MGVTKQAAQKRFVPRA--EATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHL 127 MGVT+QAAQKRFVP+ EA+ LDP QGF RF DEI P+HL Sbjct: 70 MGVTRQAAQKRFVPKKPDEASDLDPNQGFSRFDEQARSAVVGATNAAHAAHNDEIRPEHL 129 Query: 128 LLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLELTFR 185 +LG+ Q + + +R A++ LPAA E PALIPF ARKVLELTFR Sbjct: 130 VLGLVAVPDCLALRVMADQGVPADRVREAATLALPAAADELPALIPFDAAARKVLELTFR 189 Query: 186 EALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGPDSR 243 EALRLGH+ +G+ H+ GV+K A A +++++ + G P +R Sbjct: 190 EALRLGHDTVGSGHVLLALLEFEDGAGLLSGLGVDKEAASASVAASV-AAAGPAPGAR 246 >tr|C8XC43|C8XC43_NAKMY Tax_Id=479431 SubName: Full=Clp domain protein;[Nakamurella multipartita] Length = 237 Score = 218 bits (554), Expect = 6e-55 Identities = 120/228 (52%), Positives = 145/228 (63%), Gaps = 4/228 (1%) Query: 12 RLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSMG 71 RLD+LI+AI VHT+ L+QLTDAVLAA+HLG +ADHLIGHFVDQARRSGASWT IG SMG Sbjct: 12 RLDDLINAITAVHTDPLEQLTDAVLAADHLGSLADHLIGHFVDQARRSGASWTQIGASMG 71 Query: 72 VTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLGV 131 VTKQAAQKRFVPR A +LDP+QGF FTP D++ P+HLLLG+ Sbjct: 72 VTKQAAQKRFVPR--APSLDPQQGFEAFTPRARNTIVAAQSESRERGDDQVRPEHLLLGL 129 Query: 132 XXXXXXXXXXXXRMQAIDTEALRAS--VRLPAATGETPALIPFSGPARKVLELTFREALR 189 Q + + +RA+ LPA G +P IP+ A+KVL+LTFREALR Sbjct: 130 LSEPAGLAMKALAEQGLSADRIRAATVAVLPAGPGPSPDPIPYDATAQKVLQLTFREALR 189 Query: 190 LGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 LGHNYIGTEH+ GV++ R EA L +AL L+G Sbjct: 190 LGHNYIGTEHVLLALLEFEGGSGVLAGLGVDRERVEASLLAALGGLSG 237 >tr|A8M715|A8M715_SALAI Tax_Id=391037 SubName: Full=Clp domain protein;[Salinispora arenicola] Length = 243 Score = 216 bits (550), Expect = 2e-54 Identities = 122/239 (51%), Positives = 145/239 (60%), Gaps = 3/239 (1%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 + E +T+PVRLDELID IKQ HTNALDQL DAVLA +HLGE+ADHLIGHFVDQARRSG Sbjct: 1 MTEPLTMTHPVRLDELIDHIKQAHTNALDQLADAVLAGDHLGEVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPRAE-ATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXX 119 ASWT+IG+SMGV+KQAAQKR + E A L E GFGRFT Sbjct: 61 ASWTEIGRSMGVSKQAAQKRSAAKVETAAALGSEAGFGRFTTRARNVVVASQEEARAAGN 120 Query: 120 DEITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASV--RLPAATGETPALIPFSGPAR 177 EI P HL LG+ + + I ++LR +V LP+ + P LIP+ + Sbjct: 121 VEIGPGHLALGLLVDLDALAPQLIKARGISLDSLREAVTATLPSRVEQVPDLIPYDARGK 180 Query: 178 KVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLT 236 KVLELTFREALRLGHNYIGTEH+ G+EK EA + AL +LT Sbjct: 181 KVLELTFREALRLGHNYIGTEHILLALIEEEDGDGVLTGLGLEKKDVEAAVQGALAALT 239 >tr|C7MWY2|C7MWY2_SACVD Tax_Id=471857 SubName: Full=Clp amino terminal domain-containing protein;[Saccharomonospora viridis] Length = 233 Score = 210 bits (534), Expect = 1e-52 Identities = 116/226 (51%), Positives = 139/226 (61%), Gaps = 2/226 (0%) Query: 11 VRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 +RLD+LI AI++ T+ L+QL DAVLAAEHLGE+ADHLIGHFVDQARRSGASWT+IGKS+ Sbjct: 5 IRLDDLIKAIEKSRTDVLEQLADAVLAAEHLGELADHLIGHFVDQARRSGASWTEIGKSL 64 Query: 71 GVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLG 130 GVTKQAAQKRFV ATTLDP +GF RFTP ITP HL+LG Sbjct: 65 GVTKQAAQKRFVSPGRATTLDPSEGFRRFTPRARKVVMAAQQEARSANNASITPVHLILG 124 Query: 131 VXXXXXXXXXXXXRMQ--AIDTEALRASVRLPAATGETPALIPFSGPARKVLELTFREAL 188 + + Q +DT RA LP A E P LIP+ ARKVLELTFR+AL Sbjct: 125 LVGEPEGVAAVAIQAQEVTLDTVRERALAALPKAEEEVPDLIPYDPDARKVLELTFRQAL 184 Query: 189 RLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALES 234 RLGH Y+GTEH+ G+ K + E +A+E+ Sbjct: 185 RLGHEYVGTEHILLALSEHENGKGVLSELGLRKEKLEEAAVAAVEA 230 >tr|A4X4L1|A4X4L1_SALTO Tax_Id=369723 SubName: Full=Clp N terminal domain protein;[Salinispora tropica] Length = 243 Score = 208 bits (529), Expect = 5e-52 Identities = 121/239 (50%), Positives = 141/239 (58%), Gaps = 3/239 (1%) Query: 1 VAESTKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSG 60 +AE +T+PVRLDELID IKQ HTNALDQL DAVLA +HLGE+ADHLIGHFVDQARRSG Sbjct: 1 MAEPLMMTHPVRLDELIDHIKQAHTNALDQLADAVLAGDHLGEVADHLIGHFVDQARRSG 60 Query: 61 ASWTDIGKSMGVTKQAAQKRFVPR-AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXX 119 ASWT+IG+SMGV+KQAAQKR + A A L+ + GF RFT Sbjct: 61 ASWTEIGRSMGVSKQAAQKRSAAKVASAAALESDAGFSRFTTRARNVVIASQEEARAAGN 120 Query: 120 DEITPDHLLLG--VXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPALIPFSGPAR 177 EI P HL LG V R ++D A + LP + P LIP+ + Sbjct: 121 VEIGPVHLALGLLVDPDALAPQLITARGVSLDRLADAVAATLPPRVEQVPDLIPYDARGK 180 Query: 178 KVLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLT 236 KVLELTFRE LRLGHNYIGTEH+ G+EK EA L AL +LT Sbjct: 181 KVLELTFREGLRLGHNYIGTEHILLALLEAEDGDGVLTGLGLEKEGVEAALQGALAALT 239 >tr|B1VV99|B1VV99_STRGG Tax_Id=455632 (clpX)SubName: Full=Putative ClpX protein;[Streptomyces griseus subsp. griseus] Length = 245 Score = 206 bits (525), Expect = 1e-51 Identities = 109/198 (55%), Positives = 136/198 (68%), Gaps = 4/198 (2%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 +T VRLD+LI+AIK+ + +AL+QL+ AVLAA+HLG++ADHLIGHFVDQARRSGASWTDI Sbjct: 7 VTPSVRLDDLIEAIKKTNDDALEQLSGAVLAADHLGDVADHLIGHFVDQARRSGASWTDI 66 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPE--QGFGRFTPXXXXXXXXXXXXXXXXXXDEITP 124 G+SMGVT+QAAQKRFVP+ + +PE +GF RFTP EI P Sbjct: 67 GRSMGVTRQAAQKRFVPKKGGGSPEPEPNEGFNRFTPRARNVVVASHNEAQAARHAEIVP 126 Query: 125 DHLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLEL 182 HL+LG+ Q + +ALR A+ LPAA E P LIP+ ++KVLEL Sbjct: 127 AHLILGLLAEPEAIAARVLTGQGVPADALRAAATAALPAAVDEAPELIPYDADSKKVLEL 186 Query: 183 TFREALRLGHNYIGTEHM 200 TFREALRLGHNY+GTEH+ Sbjct: 187 TFREALRLGHNYVGTEHI 204 >tr|Q9X8L2|Q9X8L2_STRCO Tax_Id=1902 SubName: Full=Putative uncharacterized protein SCO3433;[Streptomyces coelicolor] Length = 258 Score = 206 bits (523), Expect = 2e-51 Identities = 111/196 (56%), Positives = 130/196 (66%), Gaps = 3/196 (1%) Query: 7 ITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 IT VRLDELI AIK+VH L+QL DAV+A EHLGE+ADHLIGHFVDQARRSGASWTDI Sbjct: 7 ITSSVRLDELITAIKKVHPEPLEQLQDAVIAGEHLGEVADHLIGHFVDQARRSGASWTDI 66 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDH 126 GKSMGVT+QAAQKRFV + E+ LD QGF R+TP E P+H Sbjct: 67 GKSMGVTRQAAQKRFVTK-ESADLDAGQGFSRYTPRARNVVMTAHNAAKTAGNAEGLPEH 125 Query: 127 LLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLELTF 184 L+LG+ Q + +A+ A+ LP A E P L+P+ A+KVLELTF Sbjct: 126 LVLGLVTERESLSAKAIAAQGVTLDAIHEAATAALPPAAAEVPELVPYGPAAKKVLELTF 185 Query: 185 REALRLGHNYIGTEHM 200 REALRLGHNYIGTEH+ Sbjct: 186 REALRLGHNYIGTEHI 201 >tr|C4RR89|C4RR89_9ACTO Tax_Id=219305 SubName: Full=Putative uncharacterized protein;[Micromonospora sp. ATCC 39149] Length = 243 Score = 204 bits (520), Expect = 5e-51 Identities = 114/232 (49%), Positives = 142/232 (61%), Gaps = 3/232 (1%) Query: 11 VRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 VRLD+LI AIK+ +ALDQL DAV+ A+HLG++ADHLIGHFVDQARRSGASWT+IG+SM Sbjct: 11 VRLDDLITAIKKARPDALDQLADAVVVADHLGDVADHLIGHFVDQARRSGASWTEIGRSM 70 Query: 71 GVTKQAAQKRFVPRAE-ATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLL 129 GV+KQAAQKR +AE A TLDP GFGRFTP EITP HL L Sbjct: 71 GVSKQAAQKRSAAKAETAATLDPSAGFGRFTPRARTVVLASQEEARAAGNAEITPGHLAL 130 Query: 130 GVXXXXXXXXXXXXRMQAIDTEALRASV--RLPAATGETPALIPFSGPARKVLELTFREA 187 G+ + I E +R +V LPA + P LIPF A+KVLELTFREA Sbjct: 131 GLLAEPEGLGAASIVARGIPLERVREAVTGTLPAKVDQVPDLIPFDARAKKVLELTFREA 190 Query: 188 LRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHG 239 LR+GH+++GTEH+ G+EK E+ + +AL + +G Sbjct: 191 LRMGHDHVGTEHILLALLEEEGGDGVLGGLGLEKGAVESAVEAALAGIVRNG 242 >tr|Q5YNW2|Q5YNW2_NOCFA Tax_Id=37329 (clpX2)SubName: Full=Putative Clp protease subunit;[Nocardia farcinica] Length = 243 Score = 196 bits (498), Expect = 2e-48 Identities = 115/235 (48%), Positives = 139/235 (59%), Gaps = 7/235 (2%) Query: 8 TYPVRLDELIDAIKQVHT-NALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 T +RLD+LI AIK+ N L+QL+DAV+AA LGE+ADHLIGHFVDQARRSGASWTDI Sbjct: 3 TPQIRLDDLITAIKRARPDNVLEQLSDAVVAANRLGEVADHLIGHFVDQARRSGASWTDI 62 Query: 67 GKSMGVTKQAAQKRFVPRAEAT-TLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPD 125 G SMGV+KQAAQKRFVP+ A +DP +GF RFTP EI+ Sbjct: 63 GASMGVSKQAAQKRFVPKGPAAGGIDPNEGFARFTPRAQQVVMASQEAARLSGHAEISAA 122 Query: 126 HLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPA---LIPFSGPARKVL 180 HL+LG+ + + +ALR A P A E PA LIPF+ A+KVL Sbjct: 123 HLILGLMSQPDALAMREITARGVTEDALRTAAVAAFPPAPSEKPADSGLIPFASDAKKVL 182 Query: 181 ELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 ELT+REALRLGHNYIGTEH+ G++K + EA L L L Sbjct: 183 ELTYREALRLGHNYIGTEHILLALLEEEHGAGPLSGLGIDKEQTEAHLVEVLSQL 237 >tr|Q82EH8|Q82EH8_STRAW Tax_Id=33903 (clpX1)SubName: Full=Putative ClpX protein;[Streptomyces avermitilis] Length = 229 Score = 167 bits (424), Expect = 7e-40 Identities = 89/168 (52%), Positives = 108/168 (64%), Gaps = 3/168 (1%) Query: 35 VLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSMGVTKQAAQKRFVPRAEATTLDPEQ 94 ++AA+HLG++ADHLIGHFVDQARRSGASWTDIGKSMGVT+QAAQKRFVP+AE LDP Q Sbjct: 1 MIAADHLGDVADHLIGHFVDQARRSGASWTDIGKSMGVTRQAAQKRFVPKAE-VDLDPSQ 59 Query: 95 GFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALR 154 GF R+T E P+HL+LG+ Q +++R Sbjct: 60 GFSRYTERARNVVLAAHNEAKAAGNAESLPEHLVLGLLAEPEALAAKAVTAQGAPPDSVR 119 Query: 155 --ASVRLPAATGETPALIPFSGPARKVLELTFREALRLGHNYIGTEHM 200 A+ LP + P LIP+ A+K LELTFREALRLGHNYIGTE + Sbjct: 120 RAATAALPPSADTVPELIPYGPAAKKALELTFREALRLGHNYIGTERI 167 >tr|Q93HB2|Q93HB2_STRAW Tax_Id=33903 (clpX)SubName: Full=ClpX homolog;[Streptomyces avermitilis] Length = 234 Score = 165 bits (418), Expect = 4e-39 Identities = 99/231 (42%), Positives = 127/231 (54%), Gaps = 6/231 (2%) Query: 5 TKITYPVRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWT 64 T+IT PV+LDELI AI + HT ALDQL+ A+L A+H+GE+ADHLIGHFVDQAR SGASWT Sbjct: 2 TQITPPVKLDELITAITENHTTALDQLSGAILLADHIGEVADHLIGHFVDQARHSGASWT 61 Query: 65 DIGKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITP 124 DIG+ MGVT+QAAQKRFV + +A P F +F+ EI P Sbjct: 62 DIGRCMGVTRQAAQKRFVGKPDA---KPSNAFEKFSQPARSAIIAGMNEAKTAGNAEIVP 118 Query: 125 DHLLLGVXXXXXXXXXXXXRMQAIDTEALR--ASVRLPAATGETPALIPFSGPARKVLEL 182 H+LLG+ R Q ID + R A LP + P LIP+ A+K LEL Sbjct: 119 AHVLLGL-LGTEGSAVGALRAQGIDLDQARDTAVATLPPRSDADPVLIPYDAHAKKALEL 177 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALE 233 R A RLG + + T HM G++ + AE ++ A + Sbjct: 178 ASRVAFRLGQDSVSTGHMLLGLLEEGDGAGVLASLGLDTAAAERFVAEAAD 228 >tr|D0LEM0|D0LEM0_GORB4 Tax_Id=526226 SubName: Full=Clp domain protein;[Gordonia bronchialis] Length = 242 Score = 157 bits (396), Expect = 1e-36 Identities = 93/233 (39%), Positives = 125/233 (53%), Gaps = 8/233 (3%) Query: 11 VRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 +RLD+LI AI++ H + LDQL DA++AA+HLGEIAD LIGHFVDQARR+GASWT IG SM Sbjct: 7 IRLDDLIAAIRKQHDDPLDQLADAMVAADHLGEIADSLIGHFVDQARRAGASWTSIGASM 66 Query: 71 GVTKQAAQKRFVPR---AEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHL 127 GV+KQAAQKRFV R A D + F RFTP +++P H+ Sbjct: 67 GVSKQAAQKRFVSRTSPAANAANDADNPFSRFTPRAGNVLMAAHSRAVAANAAQVSPAHI 126 Query: 128 LLGVXXXXXXXXXXXXRMQAIDTEALRASVR--LPAATGETP---ALIPFSGPARKVLEL 182 + R I + L ++ +P A P +L+P+ A+ V+E Sbjct: 127 ADALAAEPDALAMAVLRDNGIGVDDLHTALAPLMPIAPDRGPDATSLLPYDNAAKAVIES 186 Query: 183 TFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESL 235 T A+ LGHNY+GTEH+ GV+ A A +++ LE L Sbjct: 187 TVAIAVELGHNYVGTEHLLLGLFTDDGVAEKLRSLGVDSDGARASITAMLEQL 239 >tr|C6WCD8|C6WCD8_ACTMD Tax_Id=446462 SubName: Full=Clp domain protein;[Actinosynnema mirum] Length = 240 Score = 135 bits (340), Expect = 4e-30 Identities = 89/238 (37%), Positives = 124/238 (52%), Gaps = 8/238 (3%) Query: 11 VRLDELIDAIKQVHTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 V+L +LI + H + L++LT AV + L E+ DHLIGHFVD+ARRSGASWT+IG+S+ Sbjct: 4 VQLTDLIVDVATRHVSPLERLTAAVDLSSRLDELGDHLIGHFVDEARRSGASWTEIGESI 63 Query: 71 GVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLG 130 GV+KQAAQKRFVP+ + P R+T + I +HLL+G Sbjct: 64 GVSKQAAQKRFVPKESPDLVRP--SLDRYT--DRARRVVALAKHHARHSERIGTEHLLMG 119 Query: 131 -VXXXXXXXXXXXXRMQAID-TEALRASVRLPAATGETPALIPFSGPARKVLELTFREAL 188 + +++A + T L V L +G+ P PFS +RK LEL REAL Sbjct: 120 LLDEHGGLGARTVAKLEASEGTTRLALLVELEKESGKRPDPQPFSAHSRKALELAVREAL 179 Query: 189 RLGHNYIGTEH--MXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGHGPDSRP 244 RL H ++GTEH + +GVE+ AE + + + S GP S P Sbjct: 180 RLAHTFVGTEHLLLGLLAEGDGAAARVLDSTGVERDAAERYVVAEITSAINRGPRSTP 237 >tr|B1MHD1|B1MHD1_MYCA9 Tax_Id=561007 SubName: Full=Putative Clp protease subunit;[Mycobacterium abscessus] Length = 233 Score = 132 bits (332), Expect = 3e-29 Identities = 86/198 (43%), Positives = 106/198 (53%), Gaps = 16/198 (8%) Query: 9 YPVRLDELIDAIKQVHTN--ALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 +P+ LD LI++++ +H + ALD L+DA+L A L + AD LIGHFVDQARRSGASW++I Sbjct: 4 FPISLDNLIESVRGMHPDGTALDHLSDAMLLAGRLSDHADALIGHFVDQARRSGASWSEI 63 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDH 126 G SMGV+KQAAQKRFVP F RFT IT DH Sbjct: 64 GSSMGVSKQAAQKRFVPSVRM--------FSRFT-DRARRSVVGAAGFALADGTPITVDH 114 Query: 127 LLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPA----ATGETPALIPFSGPARKVLEL 182 LL G I +AL R PA A T + F G A++ LE Sbjct: 115 LLAGAISDPKGLAAVIVAQAGITADALGIPER-PAPDYDAVAPTLSTAEFDGDAQEALEA 173 Query: 183 TFREALRLGHNYIGTEHM 200 T ALRLGHN+IGTEH+ Sbjct: 174 TLHIALRLGHNFIGTEHL 191 >tr|C4DPW3|C4DPW3_9ACTO Tax_Id=446470 SubName: Full=Clp amino terminal domain-containing protein;[Stackebrandtia nassauensis DSM 44728] Length = 246 Score = 122 bits (305), Expect = 5e-26 Identities = 88/203 (43%), Positives = 107/203 (52%), Gaps = 16/203 (7%) Query: 10 PVRLDELIDAIKQVHTN--ALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIG 67 PVRLD+LI I H + AL QL+DA A L E ADHLIGHFVD+ARRSGASW+ IG Sbjct: 6 PVRLDDLIGHITTNHPDGDALAQLSDACRIAMVLDEQADHLIGHFVDRARRSGASWSAIG 65 Query: 68 KSMGVTKQAAQKRFVPRAEATTL-DPEQG-FGRFTPXXXXXXXXXXXXXXXXXXDEITPD 125 + MGV+KQAAQKRFV +L D + G RFT + P Sbjct: 66 QHMGVSKQAAQKRFVTGPGDFSLGDADDGKLSRFTGRTKIVLEKGHLTARNLKHSPVEPI 125 Query: 126 HLLLGVXXXXXXXXXXXXRMQAIDTEAL--RASVRLPA------ATGETPALIPFSGPAR 177 HLL G+ + E L R S L A ATG+ IP S + Sbjct: 126 HLLHGLAEEPSTLAAKVLESMGVTIEQLHDRVSEALDAPGQGAYATGD----IPLSPDSV 181 Query: 178 KVLELTFREALRLGHNYIGTEHM 200 + L+LT REAL +GHNY+GTEH+ Sbjct: 182 ETLKLTVREALGMGHNYVGTEHL 204 >tr|C7QJ13|C7QJ13_CATAD Tax_Id=479433 SubName: Full=Clp domain protein;[Catenulispora acidiphila] Length = 282 Score = 119 bits (297), Expect = 4e-25 Identities = 77/213 (36%), Positives = 104/213 (48%), Gaps = 25/213 (11%) Query: 13 LDELIDAIKQVH--TNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 L LI I+ H ++ L +L DAV + +ADHL+GHFVD+AR +GASW IG ++ Sbjct: 7 LPVLIARIESSHPFSDPLARLADAVETGASISALADHLVGHFVDEARAAGASWAQIGVAL 66 Query: 71 GVTKQAAQKRFVPRAEATTLDPE---QGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHL 127 GV+KQA Q+RFVPR AT D + Q F RFTP +TP H+ Sbjct: 67 GVSKQAVQQRFVPREPATVADFDIEVQRFSRFTPRCLNCVLGAEKIAVATGAAAVTPTHI 126 Query: 128 LLGVXXXXXXXXXXXXRMQAIDTEALRASV--RLP--------------AATGETPAL-- 169 L+G+ D +RA+ LP A + PA+ Sbjct: 127 LIGLFVEPQSLAIHALADNGADPAQVRAAAVETLPPAPEGATVLATATATAPSQEPAIPG 186 Query: 170 --IPFSGPARKVLELTFREALRLGHNYIGTEHM 200 +PF+ ARK +L R AL GHNY+GTEH+ Sbjct: 187 NSLPFTPEARKTFDLAVRAALSAGHNYVGTEHL 219 >tr|A4TGI5|A4TGI5_MYCGI Tax_Id=350054 SubName: Full=Clp N terminal domain protein;[Mycobacterium gilvum] Length = 246 Score = 85.1 bits (209), Expect = 6e-15 Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 31/212 (14%) Query: 9 YPVRLDELIDAIKQVHTN--ALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDI 66 +P +D LI ++Q+ + L + +A + L + AD L+GHFV +ARRSG SWT+I Sbjct: 4 FPTSIDTLIHYVEQLRPDDAPLKYVAEAQAVSSRLTDQADELLGHFVSRARRSGHSWTEI 63 Query: 67 GKSMGVTKQAAQKRFVPRAEATTLDPEQG-FGRFTPXXXXXXXXXXXXXXXXXXDEI--- 122 G +GV+KQA +KRF+PR + + P + RFT + Sbjct: 64 GSQLGVSKQAVRKRFIPRWDGSDPIPRASLYSRFTLYARRAMLVANATALQTGATNVDTN 123 Query: 123 --------TPDHLL------LGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPA 168 PD L LG+ MQ D E A+++ T + A Sbjct: 124 FLAAALLSEPDGLAARIVADLGI-SADDMYDTLGTTMQTCDLEPTVANLQRVTLTDTSTA 182 Query: 169 LIPFSGPARKVLELTFREALRLGHNYIGTEHM 200 LE T LRLGHNYIGTEH+ Sbjct: 183 ----------ALESTHTATLRLGHNYIGTEHI 204 >tr|C1WVY0|C1WVY0_9ACTO Tax_Id=479435 SubName: Full=Clp amino terminal domain-containing protein;[Kribbella flavida DSM 17836] Length = 237 Score = 77.4 bits (189), Expect = 1e-12 Identities = 73/238 (30%), Positives = 100/238 (42%), Gaps = 22/238 (9%) Query: 13 LDELIDAIKQV--HTNALDQLTDAVLAAEHLGEIADHLIGHFVDQARRSGASWTDIGKSM 70 L +LID I+ + L QL A L +D +G+FVD+AR +G SW +I + Sbjct: 7 LQQLIDLIRADAGSDDVLAQLATASSTITDLNATSDAALGYFVDRARGAGKSWVEISAVL 66 Query: 71 GVTKQAAQKRFVPRAEATTLDPEQGFGRFTPXXXXXXXXXXXXXXXXXXDEITPDHLLLG 130 GV+KQAA KRF A LD E RFT + +HLLLG Sbjct: 67 GVSKQAAHKRFAD-AWPGKLDLE----RFTLRTKVVIQAASGIARERGQSFVGTEHLLLG 121 Query: 131 VXXXXXXXXXXXXR---------MQAIDTEALRASVRLPAATGETPALIPFSGPARKVLE 181 + + AID E ++ P AT E +P + A V+ Sbjct: 122 LFTEPQSVATLLMTEAGLTEHDVLAAIDAEVPPSAGGEPGATKE----LPMTPRASHVIG 177 Query: 182 LTFREALRLGHNYIGTEH--MXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTG 237 +AL LGHNYIGTEH + + G+ + A + +ALE LTG Sbjct: 178 QAAEQALLLGHNYIGTEHLLLAFYQYPDGVAAKVLIQLGLTEQAARDGVRAALEKLTG 235 >tr|B5GF24|B5GF24_9ACTO Tax_Id=465543 SubName: Full=Truncated clp domain-containing protein;[Streptomyces sp. SPB74] Length = 145 Score = 75.1 bits (183), Expect = 7e-12 Identities = 46/120 (38%), Positives = 57/120 (47%), Gaps = 10/120 (8%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRL---PAATGETPALIPFSGPARK 178 ITP HL+LG+ Q + EA+R + P + P L+PF A+K Sbjct: 16 ITPAHLVLGLLDEPQCLGVVVLTDQDVRPEAVREAAEAALPPREEADLPTLVPFDAAAKK 75 Query: 179 VLELTFREALRLGHNYIGTEHMXXXXXXXXXXXXXXHRSGVEKSRAEADLSSALESLTGH 238 VLELTFREALRLGHNY+GTEH+ G+ K R E LTGH Sbjct: 76 VLELTFREALRLGHNYVGTEHLVLALLEHENGEGVLSGLGIGKER-------TTELLTGH 128 >tr|C2BSH3|C2BSH3_9ACTO Tax_Id=548479 SubName: Full=ATPase with chaperone activity, ATP-binding subunit;[Mobiluncus curtisii ATCC 43063] Length = 884 Score = 64.7 bits (156), Expect = 9e-09 Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPAL--IPFSGPARKV 179 I +HLLLG+ I EA+RA V GE P IPF+ ARKV Sbjct: 28 IGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGEQPTTGHIPFTPRARKV 87 Query: 180 LELTFREALRLGHNYIGTEHM 200 LE + REAL+LGHNYIGTEH+ Sbjct: 88 LEFSMREALQLGHNYIGTEHI 108 >tr|D0YPF8|D0YPF8_9ACTO Tax_Id=596328 (clpC)SubName: Full=Negative regulator of genetic competence ClpC/MecB;[Mobiluncus mulieris 28-1] Length = 915 Score = 64.3 bits (155), Expect = 1e-08 Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPAL--IPFSGPARKV 179 I +HLLLG+ I EA+RA V GE P IPF+ ARKV Sbjct: 28 IGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGEQPTTGHIPFTPRARKV 87 Query: 180 LELTFREALRLGHNYIGTEHM 200 LE + REAL+LGHNYIGTEH+ Sbjct: 88 LEYSMREALQLGHNYIGTEHI 108 >tr|C2KSF5|C2KSF5_9ACTO Tax_Id=585199 SubName: Full=ATPase with chaperone activity, ATP-binding subunit;[Mobiluncus mulieris ATCC 35243] Length = 915 Score = 64.3 bits (155), Expect = 1e-08 Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPAL--IPFSGPARKV 179 I +HLLLG+ I EA+RA V GE P IPF+ ARKV Sbjct: 28 IGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGEQPTTGHIPFTPRARKV 87 Query: 180 LELTFREALRLGHNYIGTEHM 200 LE + REAL+LGHNYIGTEH+ Sbjct: 88 LEYSMREALQLGHNYIGTEHI 108 >tr|A7BBJ6|A7BBJ6_9ACTO Tax_Id=411466 SubName: Full=Putative uncharacterized protein;[Actinomyces odontolyticus ATCC 17982] Length = 826 Score = 62.4 bits (150), Expect = 4e-08 Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPAL--IPFSGPARKV 179 I +HLLLG+ I EA+RASV GE P IPF+ A++V Sbjct: 32 IGTEHLLLGLISEGEGVAAKALETMEIKGEAVRASVIEIIGEGEKPVEGHIPFTPRAKRV 91 Query: 180 LELTFREALRLGHNYIGTEHM 200 EL+ REAL+LGHNYIGTEH+ Sbjct: 92 FELSLREALQLGHNYIGTEHL 112 >tr|C0VYU9|C0VYU9_9ACTO Tax_Id=525245 SubName: Full=ATPase with chaperone activity, ATP-binding subunit;[Actinomyces coleocanis DSM 15436] Length = 880 Score = 60.8 bits (146), Expect = 1e-07 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Query: 122 ITPDHLLLGVXXXXXXXXXXXXRMQAIDTEALRASVRLPAATGETPAL--IPFSGPARKV 179 I +HLLLG+ M +D E +R S+ G+ IPF+ A+KV Sbjct: 28 IGTEHLLLGLIQEGEGVAAKALEMANVDGEQVRESIIEMIGEGKNAPTGHIPFTPRAKKV 87 Query: 180 LELTFREALRLGHNYIGTEHM 200 LEL+ REAL+LGHNYIGTEH+ Sbjct: 88 LELSLREALQLGHNYIGTEHI 108 Score = 35.4 bits (80), Expect = 5.7 Identities = 16/29 (55%), Positives = 20/29 (68%) Query: 172 FSGPARKVLELTFREALRLGHNYIGTEHM 200 F+ AR+V+ L EA L HNYIGTEH+ Sbjct: 5 FTDRARRVVVLAQNEARSLNHNYIGTEHL 33 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.316 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,398,092,859 Number of extensions: 42722111 Number of successful extensions: 118228 Number of sequences better than 10.0: 773 Number of HSP's gapped: 118417 Number of HSP's successfully gapped: 944 Length of query: 247 Length of database: 3,846,993,858 Length adjustment: 134 Effective length of query: 113 Effective length of database: 2,336,116,656 Effective search space: 263981182128 Effective search space used: 263981182128 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 78 (34.7 bits)