BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_2109
         (184 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|A0PPD1|RUVC_MYCUA Tax_Id=362242 (ruvC)RecName: Full=Crossover...   298   2e-79
sp|B2HN61|RUVC_MYCMM Tax_Id=216594 (ruvC)RecName: Full=Crossover...   298   2e-79
sp|P66760|RUVC_MYCTU Tax_Id=1773 (ruvC)RecName: Full=Crossover j...   248   2e-64
sp|A5U5U4|RUVC_MYCTA Tax_Id=419947 (ruvC)RecName: Full=Crossover...   248   2e-64
sp|C1AF63|RUVC_MYCBT Tax_Id=561275 (ruvC)RecName: Full=Crossover...   248   2e-64
sp|A1KLU2|RUVC_MYCBP Tax_Id=410289 (ruvC)RecName: Full=Crossover...   248   2e-64
sp|P66761|RUVC_MYCBO Tax_Id=1765 (ruvC)RecName: Full=Crossover j...   248   2e-64
tr|C6DMA0|C6DMA0_MYCTK Tax_Id=478434 SubName: Full=Crossover jun...   248   2e-64
tr|A5WQK2|A5WQK2_MYCTF Tax_Id=336982 SubName: Full=Crossover jun...   248   2e-64
tr|A4KJN6|A4KJN6_MYCTU Tax_Id=395095 SubName: Full=Crossover jun...   248   2e-64
tr|A2VKV0|A2VKV0_MYCTU Tax_Id=348776 SubName: Full=Crossover jun...   248   2e-64
sp|A0QWH4|RUVC_MYCS2 Tax_Id=246196 (ruvC)RecName: Full=Crossover...   246   1e-63
tr|A4TD15|A4TD15_MYCGI Tax_Id=350054 SubName: Full=Holliday junc...   244   4e-63
sp|Q741Q2|RUVC_MYCPA Tax_Id=1770 (ruvC)RecName: Full=Crossover j...   243   9e-63
sp|A0QIB9|RUVC_MYCA1 Tax_Id=243243 (ruvC)RecName: Full=Crossover...   243   9e-63
sp|P40834|RUVC_MYCLE Tax_Id=1769 (ruvC)RecName: Full=Crossover j...   239   1e-61
tr|B8ZUI0|B8ZUI0_MYCLB Tax_Id=561304 (ruvC)SubName: Full=Crossov...   239   1e-61
sp|Q1B9R1|RUVC_MYCSS Tax_Id=164756 (ruvC)RecName: Full=Crossover...   238   2e-61
sp|A1UFA2|RUVC_MYCSK Tax_Id=189918 (ruvC)RecName: Full=Crossover...   238   2e-61
sp|A3PYW3|RUVC_MYCSJ Tax_Id=164757 (ruvC)RecName: Full=Crossover...   238   2e-61
sp|A1T882|RUVC_MYCVP Tax_Id=350058 (ruvC)RecName: Full=Crossover...   237   4e-61
sp|Q5YTE6|RUVC_NOCFA Tax_Id=37329 (ruvC)RecName: Full=Crossover ...   214   4e-54
tr|C2APK7|C2APK7_TSUPA Tax_Id=521096 SubName: Full=Holliday junc...   210   6e-53
tr|B1MCJ2|B1MCJ2_MYCA9 Tax_Id=561007 SubName: Full=Probable cros...   206   7e-52
tr|D0LCM4|D0LCM4_GORB4 Tax_Id=526226 SubName: Full=Crossover jun...   206   1e-51
sp|Q0S1C8|RUVC_RHOSR Tax_Id=101510 (ruvC)RecName: Full=Crossover...   205   2e-51
sp|C1B4C9|RUVC_RHOOB Tax_Id=632772 (ruvC)RecName: Full=Crossover...   204   4e-51
tr|C7MQZ5|C7MQZ5_SACVD Tax_Id=471857 SubName: Full=Holliday junc...   200   7e-50
tr|C3JNK0|C3JNK0_RHOER Tax_Id=596309 (ruvC)SubName: Full=Crossov...   197   3e-49
sp|C0ZZ46|RUVC_RHOE4 Tax_Id=234621 (ruvC)RecName: Full=Crossover...   197   6e-49
sp|A4FBA6|RUVC_SACEN Tax_Id=405948 (ruvC)RecName: Full=Crossover...   190   7e-47
tr|C6WCM4|C6WCM4_ACTMD Tax_Id=446462 SubName: Full=Crossover jun...   181   2e-44
sp|Q8FPK3|RUVC_COREF Tax_Id=152794 (ruvC)RecName: Full=Crossover...   176   1e-42
tr|C8NP81|C8NP81_COREF Tax_Id=196164 (ruvC)SubName: Full=Hollida...   176   1e-42
tr|C5VCD1|C5VCD1_9CORY Tax_Id=553207 (ruvC)SubName: Full=Crossov...   175   2e-42
tr|C0E2V8|C0E2V8_9CORY Tax_Id=566549 SubName: Full=Putative unch...   175   2e-42
tr|C8NUB3|C8NUB3_9CORY Tax_Id=585529 (ruvC)SubName: Full=Hollida...   174   4e-42
tr|B5I045|B5I045_9ACTO Tax_Id=463191 SubName: Full=Crossover jun...   172   2e-41
tr|B5GBP5|B5GBP5_9ACTO Tax_Id=465543 SubName: Full=Crossover jun...   171   3e-41
tr|A4QEN5|A4QEN5_CORGB Tax_Id=340322 SubName: Full=Putative unch...   171   4e-41
tr|C9Z641|C9Z641_STRSW Tax_Id=680198 (ruvC)SubName: Full=Crossov...   171   4e-41
sp|Q9AE11|RUVC_CORGL Tax_Id=1718 (ruvC)RecName: Full=Crossover j...   170   6e-41
tr|B4V688|B4V688_9ACTO Tax_Id=465541 SubName: Full=Crossover jun...   169   1e-40
sp|Q820F5|RUVC_STRAW Tax_Id=33903 (ruvC)RecName: Full=Crossover ...   166   8e-40
tr|C9NHB9|C9NHB9_9ACTO Tax_Id=591167 SubName: Full=Crossover jun...   166   1e-39
tr|B5HGQ7|B5HGQ7_STRPR Tax_Id=457429 SubName: Full=Crossover jun...   166   1e-39
sp|Q6NGX3|RUVC_CORDI Tax_Id=1717 (ruvC)RecName: Full=Crossover j...   166   1e-39
tr|C8XE21|C8XE21_NAKMY Tax_Id=479431 SubName: Full=Crossover jun...   166   1e-39
sp|Q9L289|RUVC_STRCO Tax_Id=1902 (ruvC)RecName: Full=Crossover j...   165   2e-39
tr|C3PGQ8|C3PGQ8_CORA7 Tax_Id=548476 (ruvC)SubName: Full=Crossov...   164   4e-39

>sp|A0PPD1|RUVC_MYCUA Tax_Id=362242 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           ulcerans]
          Length = 184

 Score =  298 bits (763), Expect = 2e-79
 Identities = 155/184 (84%), Positives = 156/184 (84%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDVVAIERVFSQQNVKTVM                  EVHFHTPSEVKAAVTGNGTADK
Sbjct: 61  RPDVVAIERVFSQQNVKTVMGTAQAGGVVALAAAKRGVEVHFHTPSEVKAAVTGNGTADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQTKPTP          ICHCWRAPMIAQMAKAHALAEQQRRSYTAKL
Sbjct: 121 AQVTAMVTRILALQTKPTPADAADALALAICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>sp|B2HN61|RUVC_MYCMM Tax_Id=216594 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           marinum]
          Length = 184

 Score =  298 bits (763), Expect = 2e-79
 Identities = 155/184 (84%), Positives = 156/184 (84%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDVVAIERVFSQQNVKTVM                  EVHFHTPSEVKAAVTGNGTADK
Sbjct: 61  RPDVVAIERVFSQQNVKTVMGTAQAGGVVALAAAKRGVEVHFHTPSEVKAAVTGNGTADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQTKPTP          ICHCWRAPMIAQMAKAHALAEQQRRSYTAKL
Sbjct: 121 AQVTAMVTRILALQTKPTPADAADALALAICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>sp|P66760|RUVC_MYCTU Tax_Id=1773 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>sp|A5U5U4|RUVC_MYCTA Tax_Id=419947 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>sp|C1AF63|RUVC_MYCBT Tax_Id=561275 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           bovis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>sp|A1KLU2|RUVC_MYCBP Tax_Id=410289 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           bovis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>sp|P66761|RUVC_MYCBO Tax_Id=1765 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           bovis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>tr|C6DMA0|C6DMA0_MYCTK Tax_Id=478434 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>tr|A5WQK2|A5WQK2_MYCTF Tax_Id=336982 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Mycobacterium
           tuberculosis]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>tr|A4KJN6|A4KJN6_MYCTU Tax_Id=395095 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC (Holliday junction
           nuclease);[Mycobacterium tuberculosis str. Haarlem]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>tr|A2VKV0|A2VKV0_MYCTU Tax_Id=348776 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC (Holliday junction
           nuclease);[Mycobacterium tuberculosis C]
          Length = 188

 Score =  248 bits (634), Expect = 2e-64
 Identities = 131/188 (69%), Positives = 144/188 (76%), Gaps = 4/188 (2%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLSLIESG+GRQLTALDVDVVRTPSDA L+ RLLAI++AVEHWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSLIESGRGRQLTALDVDVVRTPSDAALAQRLLAISDAVEHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            P+VVAIERVFSQ NV TVM                  +VHFHTPSEVKAAVTGNG+ADK
Sbjct: 61  HPEVVAIERVFSQLNVTTVMGTAQAGGVIALAAAKRGVDVHFHTPSEVKAAVTGNGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMA----KAHALAEQQRRSY 176
           AQVTAMVT+ILALQ KPTP          ICHCWRAP IA+MA    +A A A QQR +Y
Sbjct: 121 AQVTAMVTKILALQAKPTPADAADALALAICHCWRAPTIARMAEATSRAEARAAQQRHAY 180

Query: 177 TAKLKAAR 184
            AKLKAAR
Sbjct: 181 LAKLKAAR 188


>sp|A0QWH4|RUVC_MYCS2 Tax_Id=246196 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           smegmatis]
          Length = 185

 Score =  246 bits (627), Expect = 1e-63
 Identities = 121/184 (65%), Positives = 139/184 (75%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS+IESG+GRQ+ ALDVDVVRTP+D PL  RLL I++A EHW++TH
Sbjct: 1   MRVMGVDPGLTRCGLSMIESGKGRQVIALDVDVVRTPADTPLQKRLLTISDAAEHWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVF+ QN  T M                  EVHFHTPSEVKAAVTG+G ADK
Sbjct: 61  RPDVIAIERVFANQNANTAMGTAQAGGVIALAAAKRDIEVHFHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           +QVT MVTRILALQ KPTP          ICHCWRAPMIA+MA A A+AE+QRR + AK+
Sbjct: 121 SQVTEMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAAAEAMAEEQRRKFQAKI 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>tr|A4TD15|A4TD15_MYCGI Tax_Id=350054 SubName: Full=Holliday
           junction endonuclease RuvC; EC=3.1.22.4;[Mycobacterium
           gilvum]
          Length = 220

 Score =  244 bits (622), Expect = 4e-63
 Identities = 124/182 (68%), Positives = 136/182 (74%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           VRVMGVDPGLTRCGLS+IESG+GRQ+ ALDVDVVRTPSD PL+ RLLAI+ AVEHWL+TH
Sbjct: 29  VRVMGVDPGLTRCGLSVIESGRGRQVIALDVDVVRTPSDHPLAHRLLAISNAVEHWLDTH 88

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVFS QN  T M                  +VHFHTPSEVKAAVTGNG ADK
Sbjct: 89  RPDVIAIERVFSNQNANTAMGTAQAGGVVALAAARRDIDVHFHTPSEVKAAVTGNGRADK 148

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVT MVTRILALQ KPTP          ICHCWRAPMI++MA A  +A +QRR Y A L
Sbjct: 149 AQVTEMVTRILALQQKPTPADAADALALAICHCWRAPMISRMAAAEEMAAEQRRKYQATL 208

Query: 181 KA 182
           KA
Sbjct: 209 KA 210


>sp|Q741Q2|RUVC_MYCPA Tax_Id=1770 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           paratuberculosis]
          Length = 188

 Score =  243 bits (619), Expect = 9e-63
 Identities = 124/182 (68%), Positives = 139/182 (76%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS++ESG+GR + ALDVDVVRTPSDAPL+ RLL+I++AVEHWL TH
Sbjct: 1   MRVMGVDPGLTRCGLSVVESGRGRTVVALDVDVVRTPSDAPLAERLLSISDAVEHWLATH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVAIERVFSQ NV TVM                   VHFHTPSEVKAAVTGNG A+K
Sbjct: 61  QPDVVAIERVFSQLNVTTVMGTAQAGGVVALAAAKRGIGVHFHTPSEVKAAVTGNGAANK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQ KPTP          ICHCWRAPMIA+MA+A ALA QQR+ Y  K+
Sbjct: 121 AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMARAEALAAQQRQKYKDKV 180

Query: 181 KA 182
            A
Sbjct: 181 DA 182


>sp|A0QIB9|RUVC_MYCA1 Tax_Id=243243 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           avium]
          Length = 188

 Score =  243 bits (619), Expect = 9e-63
 Identities = 124/182 (68%), Positives = 139/182 (76%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS++ESG+GR + ALDVDVVRTPSDAPL+ RLL+I++AVEHWL TH
Sbjct: 1   MRVMGVDPGLTRCGLSVVESGRGRTVVALDVDVVRTPSDAPLAERLLSISDAVEHWLATH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVAIERVFSQ NV TVM                   VHFHTPSEVKAAVTGNG A+K
Sbjct: 61  QPDVVAIERVFSQLNVTTVMGTAQAGGVVALAAAKRGIGVHFHTPSEVKAAVTGNGAANK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQ KPTP          ICHCWRAPMIA+MA+A ALA QQR+ Y  K+
Sbjct: 121 AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMARAEALAAQQRQKYKDKV 180

Query: 181 KA 182
            A
Sbjct: 181 DA 182


>sp|P40834|RUVC_MYCLE Tax_Id=1769 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           leprae]
          Length = 188

 Score =  239 bits (610), Expect = 1e-61
 Identities = 118/180 (65%), Positives = 138/180 (76%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS++E+G+G Q+ ALDVDVVRTPSDAP+S RLLA+++ VEHWL+ H
Sbjct: 1   MRVMGVDPGLTRCGLSVVENGRGSQVVALDVDVVRTPSDAPVSKRLLAVSDVVEHWLDAH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDV+AIERVFSQQNV TVM                  +VHFHTPSEVKAAVTGNG A+K
Sbjct: 61  HPDVMAIERVFSQQNVSTVMGTAQAGGVIALAAARRGIDVHFHTPSEVKAAVTGNGAANK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQ KPTP          ICHCWRAPMIA+MA+A AL  + R++Y AK+
Sbjct: 121 AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAEAEALGARHRQAYRAKV 180


>tr|B8ZUI0|B8ZUI0_MYCLB Tax_Id=561304 (ruvC)SubName: Full=Crossover
           junction endodeoxyribonuclease;
           EC=3.1.22.4;[Mycobacterium leprae]
          Length = 188

 Score =  239 bits (610), Expect = 1e-61
 Identities = 118/180 (65%), Positives = 138/180 (76%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS++E+G+G Q+ ALDVDVVRTPSDAP+S RLLA+++ VEHWL+ H
Sbjct: 1   MRVMGVDPGLTRCGLSVVENGRGSQVVALDVDVVRTPSDAPVSKRLLAVSDVVEHWLDAH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDV+AIERVFSQQNV TVM                  +VHFHTPSEVKAAVTGNG A+K
Sbjct: 61  HPDVMAIERVFSQQNVSTVMGTAQAGGVIALAAARRGIDVHFHTPSEVKAAVTGNGAANK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRILALQ KPTP          ICHCWRAPMIA+MA+A AL  + R++Y AK+
Sbjct: 121 AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAEAEALGARHRQAYRAKV 180


>sp|Q1B9R1|RUVC_MYCSS Tax_Id=164756 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           sp.]
          Length = 185

 Score =  238 bits (608), Expect = 2e-61
 Identities = 120/184 (65%), Positives = 135/184 (73%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS+IESGQGR++ ALDVDVVRTP+D  L  RLL I++ VEHW++TH
Sbjct: 1   MRVMGVDPGLTRCGLSVIESGQGRKVIALDVDVVRTPADEQLHRRLLIISDTVEHWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVF+  N  T M                  +VHFHTPSEVKAAVTGNG ADK
Sbjct: 61  RPDVIAIERVFANHNANTAMGTAQAGGVIALAAAKRDIDVHFHTPSEVKAAVTGNGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVT MVTRILALQ KPTP          ICHCWRAPMIA+MA A A+A + RR Y AKL
Sbjct: 121 AQVTEMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAAAEAMAAEARRKYQAKL 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>sp|A1UFA2|RUVC_MYCSK Tax_Id=189918 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           sp.]
          Length = 185

 Score =  238 bits (608), Expect = 2e-61
 Identities = 120/184 (65%), Positives = 135/184 (73%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS+IESGQGR++ ALDVDVVRTP+D  L  RLL I++ VEHW++TH
Sbjct: 1   MRVMGVDPGLTRCGLSVIESGQGRKVIALDVDVVRTPADEQLHRRLLIISDTVEHWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVF+  N  T M                  +VHFHTPSEVKAAVTGNG ADK
Sbjct: 61  RPDVIAIERVFANHNANTAMGTAQAGGVIALAAAKRDIDVHFHTPSEVKAAVTGNGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVT MVTRILALQ KPTP          ICHCWRAPMIA+MA A A+A + RR Y AKL
Sbjct: 121 AQVTEMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAAAEAMAAEARRKYQAKL 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>sp|A3PYW3|RUVC_MYCSJ Tax_Id=164757 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           sp.]
          Length = 185

 Score =  238 bits (608), Expect = 2e-61
 Identities = 120/184 (65%), Positives = 135/184 (73%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS+IESGQGR++ ALDVDVVRTP+D  L  RLL I++ VEHW++TH
Sbjct: 1   MRVMGVDPGLTRCGLSVIESGQGRKVIALDVDVVRTPADEQLHRRLLIISDTVEHWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVF+  N  T M                  +VHFHTPSEVKAAVTGNG ADK
Sbjct: 61  RPDVIAIERVFANHNANTAMGTAQAGGVIALAAAKRDIDVHFHTPSEVKAAVTGNGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVT MVTRILALQ KPTP          ICHCWRAPMIA+MA A A+A + RR Y AKL
Sbjct: 121 AQVTEMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAAAEAMAAEARRKYQAKL 180

Query: 181 KAAR 184
           KAAR
Sbjct: 181 KAAR 184


>sp|A1T882|RUVC_MYCVP Tax_Id=350058 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Mycobacterium
           vanbaalenii]
          Length = 194

 Score =  237 bits (605), Expect = 4e-61
 Identities = 119/182 (65%), Positives = 135/182 (74%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS+IESG+GRQ+ ALDVDVVRTP+  PL+ RLLAI++AV+HWL+TH
Sbjct: 1   MRVMGVDPGLTRCGLSVIESGKGRQVIALDVDVVRTPAGHPLAHRLLAISDAVDHWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+AIERVFS QN  T M                  +VHFHTPSEVKAAVTGNG ADK
Sbjct: 61  RPDVIAIERVFSNQNANTAMGTAQAGGVIALAAARRDIDVHFHTPSEVKAAVTGNGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVT MVTRILALQ KPTP          ICHCWRAPM+ +MA A  +A +QRR Y A L
Sbjct: 121 AQVTEMVTRILALQQKPTPADAADALALAICHCWRAPMLGRMAAAEEMAAEQRRKYQATL 180

Query: 181 KA 182
           KA
Sbjct: 181 KA 182


>sp|Q5YTE6|RUVC_NOCFA Tax_Id=37329 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Nocardia
           farcinica]
          Length = 189

 Score =  214 bits (544), Expect = 4e-54
 Identities = 107/184 (58%), Positives = 127/184 (69%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCGLS++E G GR +TALDVDVVRTP+D  L+ RL+ + +A E+W++TH
Sbjct: 1   MRVMGVDPGLTRCGLSMVEGGHGRTVTALDVDVVRTPADMDLAHRLMLVADAAEYWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP  VAIERVF+Q NV+T M                   V FHTPSEVKAAVTGNG ADK
Sbjct: 61  RPGAVAIERVFAQHNVRTAMGTAQAGGVIALAAARRDIPVVFHTPSEVKAAVTGNGNADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL LQT P P          ICHCWRAP++A+MA A A A + +R YT +L
Sbjct: 121 AQVTAMVTRILGLQTAPKPADAADALALAICHCWRAPLLARMAAAEAKAAEAKRRYTERL 180

Query: 181 KAAR 184
              R
Sbjct: 181 AEQR 184


>tr|C2APK7|C2APK7_TSUPA Tax_Id=521096 SubName: Full=Holliday
           junction endonuclease RuvC; EC=3.1.22.4;[Tsukamurella
           paurometabola DSM 20162]
          Length = 215

 Score =  210 bits (534), Expect = 6e-53
 Identities = 104/184 (56%), Positives = 126/184 (68%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCG S++E+G GR++ ALDVDVVRTPS  PL  RLLA+  A E W++TH
Sbjct: 1   MRVMGVDPGLTRCGFSVVETGSGRKVVALDVDVVRTPSTMPLPERLLAVWTAAEFWMDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDV+A+ERVF+Q NV T M                  +VHFHTPSEVKAAVTGNG A K
Sbjct: 61  RPDVIAVERVFAQHNVSTAMGTAQAGGVVALAAARRGIDVHFHTPSEVKAAVTGNGNAGK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAM+T+IL LQ  P P          +CH WRAPMIA+MA+A   AE Q++ +  +L
Sbjct: 121 AQVTAMITKILGLQKAPEPADAADALALAVCHSWRAPMIARMAEAERRAEAQKKVFEQRL 180

Query: 181 KAAR 184
            A R
Sbjct: 181 AAQR 184


>tr|B1MCJ2|B1MCJ2_MYCA9 Tax_Id=561007 SubName: Full=Probable
           crossover junction endodeoxyribonuclease
           RuvC;[Mycobacterium abscessus]
          Length = 169

 Score =  206 bits (525), Expect = 7e-52
 Identities = 102/167 (61%), Positives = 123/167 (73%)

Query: 17  LIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETHRPDVVAIERVFSQQNV 76
           ++E+  GR++ ALDVDVVRTP++ PL  RLL I+E VEHW+ETHRPDVVAIERVF+QQNV
Sbjct: 1   MVEASSGRKVVALDVDVVRTPANQPLPQRLLVISEVVEHWMETHRPDVVAIERVFAQQNV 60

Query: 77  KTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADKAQVTAMVTRILALQTK 136
            TVM                  EV+FHTPSEVKAAVTGNG ADK+QVTAMVTRIL LQ  
Sbjct: 61  STVMGTAQAGGVIALCAAKRGIEVYFHTPSEVKAAVTGNGRADKSQVTAMVTRILNLQAA 120

Query: 137 PTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKLKAA 183
           P P          ICHCWRAPM+A+MAKA A+AE+QR+++ A++KAA
Sbjct: 121 PKPADAADALALAICHCWRAPMLARMAKAEAVAEEQRKAFAARMKAA 167


>tr|D0LCM4|D0LCM4_GORB4 Tax_Id=526226 SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Gordonia bronchialis]
          Length = 189

 Score =  206 bits (523), Expect = 1e-51
 Identities = 103/184 (55%), Positives = 126/184 (68%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMGVDPGLTRCG++L+ESG+GR +TALDVDVVRTP+D  L+ RLLA+  A  HW++ H
Sbjct: 1   MRVMGVDPGLTRCGIALVESGRGRAVTALDVDVVRTPTDMELADRLLAVYTAACHWIDVH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVAIERVF+Q  V T M                   V FHTPSEVKAAVTG+G ADK
Sbjct: 61  QPDVVAIERVFAQNQVSTAMGTAQAGGVIALAAGQRGIPVRFHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL +QTKP P          ICHCWR PM+ +MA+A   A++    +  ++
Sbjct: 121 AQVTAMVTRILGMQTKPRPADAADALALAICHCWRGPMMERMAQAQRQAQEAAARHRRRV 180

Query: 181 KAAR 184
            AAR
Sbjct: 181 AAAR 184


>sp|Q0S1C8|RUVC_RHOSR Tax_Id=101510 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Rhodococcus sp.]
          Length = 189

 Score =  205 bits (521), Expect = 2e-51
 Identities = 104/180 (57%), Positives = 124/180 (68%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG  +++ G GR +T + VDVVRTP+D  LSSRLL I+EA E W++ H
Sbjct: 1   MRVLGVDPGLTRCGFGVVDGGGGRTVTPIAVDVVRTPADLELSSRLLRISEAAESWIDLH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+VVAIERVFSQ NV+T M                   V FHTPSEVKAAVTG+G+ADK
Sbjct: 61  RPEVVAIERVFSQHNVRTAMGTAQAGGVVALAAARRGIPVCFHTPSEVKAAVTGSGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL L   P P          ICHCWRAPMI +MA+A A A +Q+R Y A+L
Sbjct: 121 AQVTAMVTRILKLAAAPKPADAADALALAICHCWRAPMIERMARAEAAAAEQKRRYQARL 180


>sp|C1B4C9|RUVC_RHOOB Tax_Id=632772 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Rhodococcus
           opacus]
          Length = 189

 Score =  204 bits (519), Expect = 4e-51
 Identities = 103/180 (57%), Positives = 124/180 (68%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG  +++ G GR +T + VDVVRTP+D  LSSRLL I+EA E W++ H
Sbjct: 1   MRVLGVDPGLTRCGFGVVDGGNGRTVTPVAVDVVRTPADLELSSRLLRISEAAESWIDLH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+VVAIERVF+Q NV+T M                   V FHTPSEVKAAVTG+G+ADK
Sbjct: 61  RPEVVAIERVFAQHNVRTAMGTAQAGGVVALAAARRGIPVCFHTPSEVKAAVTGSGSADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL L   P P          ICHCWRAPMI +MA+A A A +Q+R Y A+L
Sbjct: 121 AQVTAMVTRILKLAAAPRPADAADALALAICHCWRAPMIERMARAEAAAAEQKRRYQARL 180


>tr|C7MQZ5|C7MQZ5_SACVD Tax_Id=471857 SubName: Full=Holliday
           junction endonuclease RuvC;[Saccharomonospora viridis]
          Length = 196

 Score =  200 bits (508), Expect = 7e-50
 Identities = 102/183 (55%), Positives = 127/183 (69%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCGL +++ G GR +T + VDVVRTP +A ++ RLL I +AVE WL+T+
Sbjct: 1   MRVLGVDPGLTRCGLGVVDGGVGRSITGVAVDVVRTPVEAEVAQRLLRIGDAVEEWLDTY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RPDVVA+ERVFSQ NV+TVM                   V FHTPSEVKAAVTG+G ADK
Sbjct: 61  RPDVVAVERVFSQHNVRTVMGTAQAGGVVALCAARRGLPVAFHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTR+L L  KP+P          ICH WRAPM A++A+A A A +  R++ A+L
Sbjct: 121 AQVTAMVTRLLGLSKKPSPADAADALALAICHLWRAPMRARLAEAEAKAAELARAHKARL 180

Query: 181 KAA 183
            AA
Sbjct: 181 AAA 183


>tr|C3JNK0|C3JNK0_RHOER Tax_Id=596309 (ruvC)SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Rhodococcus erythropolis SK121]
          Length = 189

 Score =  197 bits (502), Expect = 3e-49
 Identities = 100/180 (55%), Positives = 123/180 (68%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCGL +++   GR++  + VDVVRTP++  L SRLL I++A E W+E +
Sbjct: 1   MRVLGVDPGLTRCGLGVVDGSNGRKVRPIAVDVVRTPAEMDLGSRLLRISDAAELWIEQY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +P+VVAIERVF+Q NV T M                   V FHTPSEVKAAVTG+G ADK
Sbjct: 61  KPEVVAIERVFAQHNVSTAMGTAQAGGVVALAAARRGIPVCFHTPSEVKAAVTGSGNADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL L+T P P          ICHCWRAPMI +MA+A A+A +Q R Y AKL
Sbjct: 121 AQVTAMVTRILNLKTAPKPADAADALALAICHCWRAPMIERMARAEAMAAEQMRKYQAKL 180


>sp|C0ZZ46|RUVC_RHOE4 Tax_Id=234621 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Rhodococcus
           erythropolis]
          Length = 189

 Score =  197 bits (500), Expect = 6e-49
 Identities = 100/180 (55%), Positives = 122/180 (67%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCGL +++   GR++  + VDVVRTP +  L SRLL I++A E W+E +
Sbjct: 1   MRVLGVDPGLTRCGLGVVDGSNGRKVRPIAVDVVRTPPEMDLGSRLLRISDAAELWIEQY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +P+VVAIERVF+Q NV T M                   V FHTPSEVKAAVTG+G ADK
Sbjct: 61  KPEVVAIERVFAQHNVSTAMGTAQAGGVVALAAARRGIPVCFHTPSEVKAAVTGSGNADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVTRIL L+T P P          ICHCWRAPMI +MA+A A+A +Q R Y AKL
Sbjct: 121 AQVTAMVTRILNLKTAPKPADAADALALAICHCWRAPMIERMARAEAMAAEQMRKYQAKL 180


>sp|A4FBA6|RUVC_SACEN Tax_Id=405948 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Saccharopolyspora
           erythraea]
          Length = 199

 Score =  190 bits (482), Expect = 7e-47
 Identities = 95/184 (51%), Positives = 122/184 (66%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ +++ G+GR +T + V V RTP+D  LS+RLL + EAV+ WL+TH
Sbjct: 1   MRVLGVDPGLTRCGIGVVDGGRGRTVTCVGVGVARTPADQELSARLLGVAEAVDEWLDTH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+VVAIERVFSQ NV+TVM                   V FHTPSEVKAA++G+G ADK
Sbjct: 61  RPEVVAIERVFSQHNVRTVMGTAQVSGIVALAAARRGLPVAFHTPSEVKAAISGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
            QVT MVT+IL L   P P          +CH WRAPM  ++A+A A A    R++ A+L
Sbjct: 121 RQVTTMVTKILGLAEAPKPADAADALALAVCHLWRAPMAGRLAEAEAKAAALARNHKARL 180

Query: 181 KAAR 184
           K AR
Sbjct: 181 KDAR 184


>tr|C6WCM4|C6WCM4_ACTMD Tax_Id=446462 SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Actinosynnema mirum]
          Length = 330

 Score =  181 bits (460), Expect = 2e-44
 Identities = 94/183 (51%), Positives = 118/183 (64%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV GVDPGLTRCG  +++ G GR +  + VDVVRTP+D  LS RLL + +AVE WL+ +
Sbjct: 1   MRVFGVDPGLTRCGFGVVDGGTGRTVRPVAVDVVRTPADEDLSRRLLQLADAVEVWLDRY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDVVAIERVFSQ NV+T M                   V FHTPSEVKAAVTG+G ADK
Sbjct: 61  SPDVVAIERVFSQHNVRTAMGTAQAGGIVALAAARRDLPVEFHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQVTAMVT++L L+  P P          ICH WRAPM +++ +A A A +  R++ A+L
Sbjct: 121 AQVTAMVTKVLGLKVAPRPADAADALALAICHLWRAPMKSRLEQAQARAAEIARNHRARL 180

Query: 181 KAA 183
             A
Sbjct: 181 AGA 183


>sp|Q8FPK3|RUVC_COREF Tax_Id=152794 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Corynebacterium
           efficiens]
          Length = 223

 Score =  176 bits (446), Expect = 1e-42
 Identities = 86/184 (46%), Positives = 115/184 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTPSDA L+ RLL +++AV  W++ +
Sbjct: 6   LRVMGIDPGLTRCGLSVVQAGRGRTVYPVSVGVVRTPSDAELADRLLRLSQAVGEWMDDY 65

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDV+AIERVF + NV TVM                   VH +TPSEVK A++GNG ADK
Sbjct: 66  TPDVIAIERVFERGNVSTVMNTAHAVGVLILAAAERGLPVHMYTPSEVKKAISGNGRADK 125

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
            Q+T M+TRIL L   P P          +CHCWRAP++ +        E +RR Y  KL
Sbjct: 126 KQMTVMITRILGLAEAPKPADAADALALAVCHCWRAPLLMRTRMTAVDLEHRRRQYQGKL 185

Query: 181 KAAR 184
             A+
Sbjct: 186 GKAK 189


>tr|C8NP81|C8NP81_COREF Tax_Id=196164 (ruvC)SubName: Full=Holliday
           junction nuclease; EC=3.1.22.4;[Corynebacterium
           efficiens YS-314]
          Length = 223

 Score =  176 bits (446), Expect = 1e-42
 Identities = 86/184 (46%), Positives = 115/184 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTPSDA L+ RLL +++AV  W++ +
Sbjct: 6   LRVMGIDPGLTRCGLSVVQAGRGRTVYPVSVGVVRTPSDAELADRLLRLSQAVGEWMDDY 65

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDV+AIERVF + NV TVM                   VH +TPSEVK A++GNG ADK
Sbjct: 66  TPDVIAIERVFERGNVSTVMNTAHAVGVLILAAAERGLPVHMYTPSEVKKAISGNGRADK 125

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
            Q+T M+TRIL L   P P          +CHCWRAP++ +        E +RR Y  KL
Sbjct: 126 KQMTVMITRILGLAEAPKPADAADALALAVCHCWRAPLLMRTRMTAVDLEHRRRQYQGKL 185

Query: 181 KAAR 184
             A+
Sbjct: 186 GKAK 189


>tr|C5VCD1|C5VCD1_9CORY Tax_Id=553207 (ruvC)SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Corynebacterium matruchotii ATCC 14266]
          Length = 235

 Score =  175 bits (444), Expect = 2e-42
 Identities = 86/184 (46%), Positives = 117/184 (63%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTPSD+ ++ RLL ++EA   WL+ +
Sbjct: 21  MRVMGIDPGLTRCGLSVVQAGRGRSVIPVAVGVVRTPSDSDIAHRLLELSEAANDWLDQY 80

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVAIER+F + NV TVM                  +VH +TPSEVK A++GNG ADK
Sbjct: 81  QPDVVAIERIFERGNVSTVMNTAHGVGVLMLAAAQRGIDVHLYTPSEVKKAISGNGRADK 140

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
            Q+TAM+TRIL L   P P          +CHCWRAP++    +A A A+ Q R     L
Sbjct: 141 KQMTAMITRILGLTEAPKPADAADALALAVCHCWRAPLLITNREAEARAQAQSRHQRGIL 200

Query: 181 KAAR 184
             A+
Sbjct: 201 GQAK 204


>tr|C0E2V8|C0E2V8_9CORY Tax_Id=566549 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium matruchotii
           ATCC 33806]
          Length = 223

 Score =  175 bits (444), Expect = 2e-42
 Identities = 86/184 (46%), Positives = 117/184 (63%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTPSD+ ++ RLL ++EA   WL+ +
Sbjct: 9   MRVMGIDPGLTRCGLSVVQAGRGRSVIPVAVGVVRTPSDSDIAHRLLELSEAANDWLDQY 68

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVAIER+F + NV TVM                  +VH +TPSEVK A++GNG ADK
Sbjct: 69  QPDVVAIERIFERGNVSTVMNTAHGVGVLMLAAAQRGIDVHLYTPSEVKKAISGNGRADK 128

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
            Q+TAM+TRIL L   P P          +CHCWRAP++    +A A A+ Q R     L
Sbjct: 129 KQMTAMITRILGLTEAPKPADAADALALAVCHCWRAPLLITNREAEARAQAQSRHQRGIL 188

Query: 181 KAAR 184
             A+
Sbjct: 189 GQAK 192


>tr|C8NUB3|C8NUB3_9CORY Tax_Id=585529 (ruvC)SubName: Full=Holliday
           junction nuclease; EC=3.1.22.4;[Corynebacterium
           genitalium ATCC 33030]
          Length = 181

 Score =  174 bits (441), Expect = 4e-42
 Identities = 86/169 (50%), Positives = 115/169 (68%), Gaps = 1/169 (0%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS+I++G+GRQ+  + V VVRTPSDA L+ RLL +++AVE W++ +
Sbjct: 6   LRVMGIDPGLTRCGLSVIQAGKGRQVIPVAVGVVRTPSDAELAHRLLRLSQAVEEWIDDY 65

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDV+A+ER+F + NV TVM                   VH +TPSEVK AV+GNG ADK
Sbjct: 66  QPDVIAMERIFERGNVSTVMHTAHAVGVMVLAAAKRDIPVHMYTPSEVKKAVSGNGRADK 125

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALA 169
            Q+T+M+TRIL L   P P          +CHCWRAP++A+   A ALA
Sbjct: 126 KQMTSMITRILGLGAPPKPADAADALAIAVCHCWRAPLLAR-GNAAALA 173


>tr|B5I045|B5I045_9ACTO Tax_Id=463191 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Streptomyces
           sviceus ATCC 29083]
          Length = 179

 Score =  172 bits (435), Expect = 2e-41
 Identities = 89/168 (52%), Positives = 107/168 (63%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT L V VVRTPSDA L  RL+A+ + +E WL+ H
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMLGVGVVRTPSDAELGQRLVAVEQGIEQWLDQH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPEFVAVERVFSQHNVRTVMGTAQASAVAMLCAARRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHAL 168
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A AL
Sbjct: 121 AQVGAMVTRLLRLDAPPKPADAADALALAICHIWRAPAQNRLQQAVAL 168


>tr|B5GBP5|B5GBP5_9ACTO Tax_Id=465543 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Streptomyces sp.
           SPB74]
          Length = 179

 Score =  171 bits (433), Expect = 3e-41
 Identities = 91/179 (50%), Positives = 107/179 (59%)

Query: 6   VDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETHRPDVV 65
           +DPGLTRCG+ ++E   GR LT + V VVRTP+DA LS RLLA+   +E WL+THRP+ V
Sbjct: 1   MDPGLTRCGVGVVEGVPGRPLTMVGVGVVRTPADAELSRRLLAVEAGIEEWLDTHRPEYV 60

Query: 66  AIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADKAQVTA 125
           AIERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADKAQV A
Sbjct: 61  AIERVFSQHNVRTVMGTAQASAVAMLCAARRGLPVALHTPSEVKAAVTGSGRADKAQVGA 120

Query: 126 MVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKLKAAR 184
           MVTR+L L   P P          ICH WRAP   ++ +AHA A    R      K  R
Sbjct: 121 MVTRLLRLAAPPKPADAADALALAICHIWRAPATNRLQEAHARARSAARPVPPVRKVVR 179


>tr|A4QEN5|A4QEN5_CORGB Tax_Id=340322 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium glutamicum]
          Length = 242

 Score =  171 bits (432), Expect = 4e-41
 Identities = 88/186 (47%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTP DA L+ RLL +++AV  W++ +
Sbjct: 27  LRVMGIDPGLTRCGLSVVQAGRGRTVYPVSVGVVRTPPDAELAERLLRLSKAVGEWMDEY 86

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDVVAIERVF + NV TVM                   VH +TPSEVK A++GNG ADK
Sbjct: 87  TPDVVAIERVFERGNVSTVMNTAHAVGVLILAAAERGLPVHMYTPSEVKKAISGNGRADK 146

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMI--AQMAKAHALAEQQRRSYTA 178
            Q+T M+TRIL L   P P          +CHCWRAPM+  AQ   +    E++RR    
Sbjct: 147 KQMTVMITRILGLGEPPKPADAADALSLAVCHCWRAPMLMRAQSQYSEQELEKRRRVQQG 206

Query: 179 KLKAAR 184
           KL  A+
Sbjct: 207 KLGKAK 212


>tr|C9Z641|C9Z641_STRSW Tax_Id=680198 (ruvC)SubName: Full=Crossover
           junction endodeoxyribonuclease;[Streptomyces scabies]
          Length = 176

 Score =  171 bits (432), Expect = 4e-41
 Identities = 90/175 (51%), Positives = 109/175 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT L V VVRTP DA L  RL+AI + +E WL+ H
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMLGVGVVRTPPDAELGRRLVAIEQGIEQWLDEH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPECVAVERVFSQHNVRTVMGTAQASAVAMLCAARRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRS 175
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A AL   + R+
Sbjct: 121 AQVGAMVTRLLRLDAPPKPADAADALALAICHIWRAPAQNRLQQAVALHASKGRT 175


>sp|Q9AE11|RUVC_CORGL Tax_Id=1718 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Corynebacterium
           glutamicum]
          Length = 221

 Score =  170 bits (431), Expect = 6e-41
 Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTP DA L+ RLL +++AV  W++ +
Sbjct: 6   LRVMGIDPGLTRCGLSVVQAGRGRTVYPVSVGVVRTPPDAELAERLLRLSKAVGEWMDEY 65

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
            PDV+AIERVF + NV TVM                   VH +TPSEVK A++GNG ADK
Sbjct: 66  TPDVIAIERVFERGNVSTVMNTAHAVGVLILAAAERGLPVHMYTPSEVKKAISGNGRADK 125

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMI--AQMAKAHALAEQQRRSYTA 178
            Q+T M+TRIL L   P P          +CHCWRAPM+  AQ   +    E++RR    
Sbjct: 126 KQMTVMITRILGLGEPPKPADAADALSLAVCHCWRAPMLMRAQSQYSEQELEKRRRVQQG 185

Query: 179 KLKAAR 184
           KL  A+
Sbjct: 186 KLGKAK 191


>tr|B4V688|B4V688_9ACTO Tax_Id=465541 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Streptomyces sp.
           Mg1]
          Length = 176

 Score =  169 bits (429), Expect = 1e-40
 Identities = 89/174 (51%), Positives = 108/174 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT + V VVRTP+D  L +RL+AI   +E WL+ H
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMIGVGVVRTPADTELGNRLVAIERGIEEWLDEH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+VVA+ERVFSQ NV TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPEVVAVERVFSQHNVSTVMGTAQASAVAMLCAARRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRR 174
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A AL   + R
Sbjct: 121 AQVGAMVTRLLRLAAPPKPADAADALALAICHIWRAPAQNRLQQAVALHASKGR 174


>sp|Q820F5|RUVC_STRAW Tax_Id=33903 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Streptomyces
           avermitilis]
          Length = 176

 Score =  166 bits (421), Expect = 8e-40
 Identities = 88/175 (50%), Positives = 109/175 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT   V VVRTP+DA L  RL+AI + +E WL+ +
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMRGVGVVRTPADAELGLRLVAIEQGIEQWLDEY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPECVAVERVFSQHNVRTVMGTAQASAVAMLCAARRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRS 175
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A AL   + R+
Sbjct: 121 AQVGAMVTRLLRLDAPPKPADAADALALAICHIWRAPAQNRLQQAVALHASKGRT 175


>tr|C9NHB9|C9NHB9_9ACTO Tax_Id=591167 SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Streptomyces flavogriseus ATCC 33331]
          Length = 177

 Score =  166 bits (420), Expect = 1e-39
 Identities = 86/167 (51%), Positives = 105/167 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT + V VVRTP+DA L  RL+AI   +E WL+ H
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMVGVGVVRTPADAELGHRLVAIERGIEQWLDEH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVF+Q NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPEYVAVERVFAQHNVRTVMGTAQASAVAMLCASRRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHA 167
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A A
Sbjct: 121 AQVGAMVTRLLRLDAPPKPADAADALALAICHIWRAPAQNRLQQAVA 167


>tr|B5HGQ7|B5HGQ7_STRPR Tax_Id=457429 SubName: Full=Crossover
           junction endodeoxyribonuclease ruvC;[Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 180

 Score =  166 bits (420), Expect = 1e-39
 Identities = 89/183 (48%), Positives = 112/183 (61%), Gaps = 3/183 (1%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ ++E   GR LT   V VVRTP DA L +RL+A+ + +E WL+ +
Sbjct: 1   MRVLGVDPGLTRCGVGVVEGVAGRPLTMRGVGVVRTPPDAELGARLVAVEQGIERWLDEY 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPEFVAVERVFSQHNVRTVMGTAQASAVAMLCAARRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQRRSYTAKL 180
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A A     R +Y +K 
Sbjct: 121 AQVGAMVTRLLRLDAPPKPADAADALALAICHIWRAPAQNRLQQAVA---AHRTTYASKG 177

Query: 181 KAA 183
           + A
Sbjct: 178 RTA 180


>sp|Q6NGX3|RUVC_CORDI Tax_Id=1717 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Corynebacterium
           diphtheriae]
          Length = 163

 Score =  166 bits (419), Expect = 1e-39
 Identities = 80/157 (50%), Positives = 103/157 (65%)

Query: 4   MGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETHRPD 63
           MG+DPGLTRCGLS++++G+GR +  + V VVRTP  A LS RLL ++EAV  W++ ++PD
Sbjct: 1   MGIDPGLTRCGLSVVQAGKGRSVIPVAVGVVRTPPHAELSQRLLELSEAVNSWIDEYQPD 60

Query: 64  VVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADKAQV 123
           VVAIER+F + NV TVM                   VH +TPSEVK A++GNG ADK Q+
Sbjct: 61  VVAIERIFERGNVSTVMNTAHGVGVLVLAAAQRGLPVHMYTPSEVKKAISGNGRADKKQM 120

Query: 124 TAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIA 160
           TAM+TRIL L   P P          +CHCWRAPM+A
Sbjct: 121 TAMITRILGLVEAPKPADAADALALAVCHCWRAPMLA 157


>tr|C8XE21|C8XE21_NAKMY Tax_Id=479431 SubName: Full=Crossover
           junction endodeoxyribonuclease RuvC;
           EC=3.1.22.4;[Nakamurella multipartita]
          Length = 181

 Score =  166 bits (419), Expect = 1e-39
 Identities = 86/169 (50%), Positives = 110/169 (65%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTRCG+ +++ G G    A++V VVRTP+DAPL+ RLL I   VE  ++ H
Sbjct: 1   MRVLGVDPGLTRCGIGVVDGGPGLPPRAVEVMVVRTPADAPLAERLLQIAVRVEAMMDRH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PD VAIERVFSQ NV+TVM                   V +HTPSEVKAAV+G+G ADK
Sbjct: 61  QPDTVAIERVFSQHNVRTVMGTAQASGVVALAAARRGIPVAWHTPSEVKAAVSGHGNADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALA 169
           AQVTAM+TR+L L   P P          +CH WR+PM +++A A A A
Sbjct: 121 AQVTAMITRLLKLPEAPKPADAADALALALCHLWRSPMQSRLAAAAAAA 169


>sp|Q9L289|RUVC_STRCO Tax_Id=1902 (ruvC)RecName: Full=Crossover
           junction endodeoxyribonuclease ruvC; EC=3.1.22.4;
           AltName: Full=Holliday junction nuclease ruvC; AltName:
           Full=Holliday junction resolvase ruvC;[Streptomyces
           coelicolor]
          Length = 188

 Score =  165 bits (418), Expect = 2e-39
 Identities = 87/172 (50%), Positives = 107/172 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RV+GVDPGLTR G+ ++E   GR LT + V VVRTP+DA L  RL+A+ + +E WL+ H
Sbjct: 1   MRVLGVDPGLTRRGIGVVEGVAGRPLTMIGVGVVRTPADADLGHRLVAVEQGIEQWLDEH 60

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           RP+ VA+ERVFSQ NV+TVM                   V  HTPSEVKAAVTG+G ADK
Sbjct: 61  RPEFVAVERVFSQHNVRTVMGTAQASAVAILCASRRGIPVALHTPSEVKAAVTGSGRADK 120

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALAEQQ 172
           AQV AMVTR+L L   P P          ICH WRAP   ++ +A AL   Q
Sbjct: 121 AQVGAMVTRLLRLAAPPKPADAADALALAICHIWRAPAQNRLQQAVALHTAQ 172


>tr|C3PGQ8|C3PGQ8_CORA7 Tax_Id=548476 (ruvC)SubName: Full=Crossover
           junction endodeoxyribonuclease;
           EC=3.1.22.4;[Corynebacterium aurimucosum]
          Length = 226

 Score =  164 bits (415), Expect = 4e-39
 Identities = 81/169 (47%), Positives = 105/169 (62%)

Query: 1   VRVMGVDPGLTRCGLSLIESGQGRQLTALDVDVVRTPSDAPLSSRLLAINEAVEHWLETH 60
           +RVMG+DPGLTRCGLS++++G+GR +  + V VVRTPSD  L  RL  ++ AV  W++ +
Sbjct: 29  LRVMGIDPGLTRCGLSVVQAGRGRGVIPIAVGVVRTPSDKDLGERLKLLSVAVREWMDDY 88

Query: 61  RPDVVAIERVFSQQNVKTVMXXXXXXXXXXXXXXXXXXEVHFHTPSEVKAAVTGNGTADK 120
           +PDVVA+ERVF +  V TVM                   VH +TPSEVK A++GNG ADK
Sbjct: 89  KPDVVALERVFERGQVSTVMQTAHAVGVLVLAAAERDIPVHMYTPSEVKKAISGNGRADK 148

Query: 121 AQVTAMVTRILALQTKPTPXXXXXXXXXXICHCWRAPMIAQMAKAHALA 169
            Q+TAM+TRIL L   P P          +CHCWRAP +A M    A A
Sbjct: 149 KQMTAMITRILGLSEAPKPADAADALALAVCHCWRAPALAWMTGGDASA 197


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.319    0.129    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,017,858,060
Number of extensions: 29337134
Number of successful extensions: 76366
Number of sequences better than 10.0: 1298
Number of HSP's gapped: 75128
Number of HSP's successfully gapped: 1298
Length of query: 184
Length of database: 3,846,993,858
Length adjustment: 129
Effective length of query: 55
Effective length of database: 2,392,492,671
Effective search space: 131587096905
Effective search space used: 131587096905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)