BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2120 (615 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HN72|B2HN72_MYCMM Tax_Id=216594 (secD)SubName: Full=Protein... 649 0.0 tr|A0PPE1|A0PPE1_MYCUA Tax_Id=362242 (secD)SubName: Full=Protein... 646 0.0 sp|Q50634|SECD_MYCTU Tax_Id=1773 (secD)RecName: Full=Protein-exp... 567 e-159 tr|C6DMA8|C6DMA8_MYCTK Tax_Id=478434 SubName: Full=Preprotein tr... 567 e-159 tr|C1AF56|C1AF56_MYCBT Tax_Id=561275 (secD)SubName: Full=Preprot... 567 e-159 tr|A5U5T7|A5U5T7_MYCTA Tax_Id=419947 (secD)SubName: Full=Protein... 567 e-159 tr|A1KLT5|A1KLT5_MYCBP Tax_Id=410289 (secD)SubName: Full=Protein... 567 e-159 tr|A5WQJ5|A5WQJ5_MYCTF Tax_Id=336982 SubName: Full=Protein-expor... 567 e-159 tr|A2VKU4|A2VKU4_MYCTU Tax_Id=348776 SubName: Full=Protein-expor... 567 e-159 tr|Q7TYA0|Q7TYA0_MYCBO Tax_Id=1765 (secD)SubName: Full=PROTEIN-E... 565 e-159 tr|Q741P6|Q741P6_MYCPA Tax_Id=1770 (secD)SubName: Full=SecD;[Myc... 550 e-154 tr|A0QIB2|A0QIB2_MYCA1 Tax_Id=243243 (secD)SubName: Full=Protein... 550 e-154 sp|P38387|SECD_MYCLE Tax_Id=1769 (secD)RecName: Full=Protein-exp... 545 e-153 tr|B8ZUI6|B8ZUI6_MYCLB Tax_Id=561304 (secD)SubName: Full=Putativ... 545 e-153 tr|Q1B9Q0|Q1B9Q0_MYCSS Tax_Id=164756 SubName: Full=Protein-expor... 483 e-134 tr|A3PYX4|A3PYX4_MYCSJ Tax_Id=164757 SubName: Full=Protein-expor... 483 e-134 tr|A1UFB3|A1UFB3_MYCSK Tax_Id=189918 SubName: Full=Protein-expor... 483 e-134 tr|A0QWJ2|A0QWJ2_MYCS2 Tax_Id=246196 (secD)SubName: Full=Protein... 463 e-128 tr|A1T891|A1T891_MYCVP Tax_Id=350058 SubName: Full=Protein-expor... 461 e-127 tr|A4TBR5|A4TBR5_MYCGI Tax_Id=350054 SubName: Full=Protein-expor... 458 e-126 tr|B1MCI8|B1MCI8_MYCA9 Tax_Id=561007 SubName: Full=Probable prot... 420 e-115 tr|Q0S1C4|Q0S1C4_RHOSR Tax_Id=101510 SubName: Full=Protein-expor... 374 e-101 tr|C1B4D3|C1B4D3_RHOOB Tax_Id=632772 (secD)SubName: Full=Protein... 370 e-100 tr|Q5YTF2|Q5YTF2_NOCFA Tax_Id=37329 (secD)SubName: Full=Putative... 357 3e-96 tr|C3JNK4|C3JNK4_RHOER Tax_Id=596309 (secD)SubName: Full=Protein... 353 3e-95 tr|C0ZZ50|C0ZZ50_RHOE4 Tax_Id=234621 (secD)SubName: Full=Protein... 352 8e-95 tr|D0LCM8|D0LCM8_GORB4 Tax_Id=526226 SubName: Full=Protein-expor... 342 7e-92 tr|C2APL5|C2APL5_TSUPA Tax_Id=521096 SubName: Full=Protein-expor... 332 1e-88 tr|A4FBB0|A4FBB0_SACEN Tax_Id=405948 SubName: Full=Preprotein tr... 330 3e-88 tr|C7MQZ9|C7MQZ9_SACVD Tax_Id=471857 SubName: Full=Protein-expor... 325 1e-86 tr|C8XE16|C8XE16_NAKMY Tax_Id=479431 SubName: Full=Protein-expor... 291 2e-76 tr|C6WCM7|C6WCM7_ACTMD Tax_Id=446462 SubName: Full=Protein-expor... 288 2e-75 tr|C4LIX5|C4LIX5_CORK4 Tax_Id=645127 (secD)SubName: Full=Protein... 254 2e-65 tr|A4QEN1|A4QEN1_CORGB Tax_Id=340322 SubName: Full=Putative unch... 252 9e-65 tr|C0UBY0|C0UBY0_9ACTO Tax_Id=526225 SubName: Full=Protein-expor... 252 9e-65 tr|Q8NPZ9|Q8NPZ9_CORGL Tax_Id=1718 SubName: Full=Preprotein tran... 250 4e-64 tr|Q9AE07|Q9AE07_CORGL Tax_Id=1718 (secD)SubName: Full=Preprotei... 250 4e-64 tr|Q8FPK7|Q8FPK7_COREF Tax_Id=152794 (secD)SubName: Full=Protein... 243 7e-62 tr|C8NP77|C8NP77_COREF Tax_Id=196164 (secD)SubName: Full=Protein... 243 7e-62 tr|Q6NGX7|Q6NGX7_CORDI Tax_Id=1717 (secD)SubName: Full=Putative ... 241 3e-61 tr|C2GHZ0|C2GHZ0_9CORY Tax_Id=548478 (secD)SubName: Full=Preprot... 239 1e-60 tr|C0VVT1|C0VVT1_9CORY Tax_Id=548477 (secD)SubName: Full=Preprot... 239 1e-60 tr|C0E2W2|C0E2W2_9CORY Tax_Id=566549 SubName: Full=Putative unch... 238 2e-60 tr|C5VCC7|C5VCC7_9CORY Tax_Id=553207 (secD)SubName: Full=Protein... 237 3e-60 tr|C6RA68|C6RA68_9CORY Tax_Id=553206 (secD)SubName: Full=Protein... 232 1e-58 tr|B1VDK0|B1VDK0_CORU7 Tax_Id=504474 SubName: Full=Protein-expor... 232 1e-58 tr|A0LUK3|A0LUK3_ACIC1 Tax_Id=351607 SubName: Full=Protein-expor... 232 1e-58 tr|C2BPA9|C2BPA9_9CORY Tax_Id=525264 (secD)SubName: Full=Preprot... 231 2e-58 tr|C8NUB7|C8NUB7_9CORY Tax_Id=585529 (secD)SubName: Full=Protein... 230 4e-58 tr|C0WKY1|C0WKY1_9CORY Tax_Id=525260 (secD)SubName: Full=Preprot... 230 5e-58 >tr|B2HN72|B2HN72_MYCMM Tax_Id=216594 (secD)SubName: Full=Protein-export membrane protein SecD;[Mycobacterium marinum] Length = 615 Score = 649 bits (1673), Expect = 0.0 Identities = 343/394 (87%), Positives = 343/394 (87%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK Sbjct: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA Sbjct: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE Sbjct: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SSEAQTVSATLGLTS SLIASGAMVFAIL Sbjct: 402 SSEAQTVSATLGLTSLRAGLIAGAIGLALVLLYSLLYYRVLGLLTALSLIASGAMVFAIL 461 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARK Sbjct: 462 VLLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA Sbjct: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 Query: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGRG Sbjct: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 Score = 201 bits (511), Expect = 2e-49 Identities = 107/125 (85%), Positives = 108/125 (86%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 VMNSM Sbjct: 121 VMNSM 125 >tr|A0PPE1|A0PPE1_MYCUA Tax_Id=362242 (secD)SubName: Full=Protein-export membrane protein SecD;[Mycobacterium ulcerans] Length = 615 Score = 646 bits (1667), Expect = 0.0 Identities = 342/393 (87%), Positives = 342/393 (87%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK Sbjct: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA Sbjct: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE Sbjct: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SSEAQTVSATLGLTS SLIASGAMVFAIL Sbjct: 402 SSEAQTVSATLGLTSLRAGLIAGAIGLALVLLYSLLYYRVLGLLTALSLIASGAMVFAIL 461 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARK Sbjct: 462 VLLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA Sbjct: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 Query: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGR 614 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGR Sbjct: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGR 614 Score = 201 bits (511), Expect = 2e-49 Identities = 107/125 (85%), Positives = 108/125 (86%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 VMNSM Sbjct: 121 VMNSM 125 >sp|Q50634|SECD_MYCTU Tax_Id=1773 (secD)RecName: Full=Protein-export membrane protein secD;[Mycobacterium tuberculosis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|C6DMA8|C6DMA8_MYCTK Tax_Id=478434 SubName: Full=Preprotein translocase subunit secD;[Mycobacterium tuberculosis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|C1AF56|C1AF56_MYCBT Tax_Id=561275 (secD)SubName: Full=Preprotein translocase subunit;[Mycobacterium bovis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|A5U5T7|A5U5T7_MYCTA Tax_Id=419947 (secD)SubName: Full=Protein export protein SecD;[Mycobacterium tuberculosis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|A1KLT5|A1KLT5_MYCBP Tax_Id=410289 (secD)SubName: Full=Protein-export membrane protein secD;[Mycobacterium bovis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|A5WQJ5|A5WQJ5_MYCTF Tax_Id=336982 SubName: Full=Protein-export membrane protein secD;[Mycobacterium tuberculosis] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|A2VKU4|A2VKU4_MYCTU Tax_Id=348776 SubName: Full=Protein-export membrane protein secD;[Mycobacterium tuberculosis C] Length = 573 Score = 567 bits (1462), Expect = e-159 Identities = 306/392 (78%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|Q7TYA0|Q7TYA0_MYCBO Tax_Id=1765 (secD)SubName: Full=PROTEIN-EXPORT MEMBRANE PROTEIN SECD;[Mycobacterium bovis] Length = 573 Score = 565 bits (1457), Expect = e-159 Identities = 305/392 (77%), Positives = 318/392 (81%), Gaps = 9/392 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP E PA DPRKDLAERIAQEKK RQSTNQY+QMVALQF+AT+C DDILAGNDDPKLP Sbjct: 191 PPAEAPAT-DPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDDPKLP 249 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQR IGYVVDLQFK AAN WADYTAAHI Sbjct: 250 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRGIGYVVDLQFKGPAANIWADYTAAHI 309 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GTQTAFTLDSQVVSAPQI EAIPGGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE S Sbjct: 310 GTQTAFTLDSQVVSAPQIQEAIPGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFEPS 369 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EAQTVSATLGL+S SL+ASG+MVFAILVL Sbjct: 370 EAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYYRVLGLLTALSLVASGSMVFAILVL 429 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI Sbjct: 430 LGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 489 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 VSG+AVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKS LAKP Sbjct: 490 VSGSAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSSLLAKP 549 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 AYNGLGAVQQVARERRA +A+TGRG Sbjct: 550 AYNGLGAVQQVARERRA--------MARTGRG 573 Score = 191 bits (486), Expect = 2e-46 Identities = 100/125 (80%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLSVFLV+LIG+YLLVF TGDK APKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSVFLVMLIGIYLLVFFTGDKHTAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR LVITVPGNDG+EARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPGNDGSEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|Q741P6|Q741P6_MYCPA Tax_Id=1770 (secD)SubName: Full=SecD;[Mycobacterium paratuberculosis] Length = 607 Score = 550 bits (1416), Expect = e-154 Identities = 286/380 (75%), Positives = 309/380 (81%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 + PPGE+PA PDPRKDLAERIA+EKKWRQST Q IQ +ALQF+AT+C KDDILAGNDDP Sbjct: 220 EAPPGEQPAPPDPRKDLAERIAEEKKWRQSTRQGIQFLALQFQATRCDKDDILAGNDDPA 279 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 PL+TCSTDHK AYLL PSIISGDQI++A++ +QR IG+VVDLQFK AANTWAD+TAA Sbjct: 280 QPLITCSTDHKVAYLLGPSIISGDQIKDASASQNQRGIGFVVDLQFKPAAANTWADFTAA 339 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDSQVVSAP I EAIPGGRTQISGG+PPF+A+TA+QLANVLKYGSLPLSF+ Sbjct: 340 HIGTQTAFTLDSQVVSAPMIQEAIPGGRTQISGGDPPFTAATAKQLANVLKYGSLPLSFQ 399 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SSEAQTVSATLGLTS SL ASGAMVFAIL Sbjct: 400 SSEAQTVSATLGLTSLRAGLIAGAIGLLLVLLYSLLYYRVLGLLTALSLAASGAMVFAIL 459 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 +LLGRYINY SFVVFFERIKDEIREGR+FRSAVPRGW RARK Sbjct: 460 ILLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRTFRSAVPRGWTRARK 519 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP LA Sbjct: 520 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPTLA 579 Query: 582 KPAYNGLGAVQQVARERRAS 601 KPAYNGLGAVQQVARERRA+ Sbjct: 580 KPAYNGLGAVQQVARERRAA 599 Score = 195 bits (496), Expect = 1e-47 Identities = 101/125 (80%), Positives = 107/125 (85%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSS PVHPARYLSVFL+LL+GVYLLVFLTGDK+AAPKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSVPVHPARYLSVFLLLLVGVYLLVFLTGDKRAAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR L+ITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLIITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >tr|A0QIB2|A0QIB2_MYCA1 Tax_Id=243243 (secD)SubName: Full=Protein-export membrane protein SecD;[Mycobacterium avium] Length = 608 Score = 550 bits (1416), Expect = e-154 Identities = 286/380 (75%), Positives = 309/380 (81%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 + PPGE+PA PDPRKDLAERIA+EKKWRQST Q IQ +ALQF+AT+C KDDILAGNDDP Sbjct: 221 EAPPGEQPAPPDPRKDLAERIAEEKKWRQSTRQGIQFLALQFQATRCDKDDILAGNDDPA 280 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 PL+TCSTDHK AYLL PSIISGDQI++A++ +QR IG+VVDLQFK AANTWAD+TAA Sbjct: 281 QPLITCSTDHKVAYLLGPSIISGDQIKDASASQNQRGIGFVVDLQFKPAAANTWADFTAA 340 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDSQVVSAP I EAIPGGRTQISGG+PPF+A+TA+QLANVLKYGSLPLSF+ Sbjct: 341 HIGTQTAFTLDSQVVSAPMIQEAIPGGRTQISGGDPPFTAATAKQLANVLKYGSLPLSFQ 400 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SSEAQTVSATLGLTS SL ASGAMVFAIL Sbjct: 401 SSEAQTVSATLGLTSLRAGLIAGAIGLLLVLLYSLLYYRVLGLLTALSLAASGAMVFAIL 460 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 +LLGRYINY SFVVFFERIKDEIREGR+FRSAVPRGW RARK Sbjct: 461 ILLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRTFRSAVPRGWTRARK 520 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP LA Sbjct: 521 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPTLA 580 Query: 582 KPAYNGLGAVQQVARERRAS 601 KPAYNGLGAVQQVARERRA+ Sbjct: 581 KPAYNGLGAVQQVARERRAA 600 Score = 195 bits (496), Expect = 1e-47 Identities = 101/125 (80%), Positives = 107/125 (85%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSS PVHPARYLSVFL+LL+GVYLLVFLTGDK+AAPKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSVPVHPARYLSVFLLLLVGVYLLVFLTGDKRAAPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APSREALAQAQQIISAR L+ITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 APSREALAQAQQIISARVNGLGVSGSEVVVDGDNLIITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NSM Sbjct: 121 VLNSM 125 >sp|P38387|SECD_MYCLE Tax_Id=1769 (secD)RecName: Full=Protein-export membrane protein secD;[Mycobacterium leprae] Length = 571 Score = 545 bits (1404), Expect = e-153 Identities = 290/394 (73%), Positives = 310/394 (78%), Gaps = 8/394 (2%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 ++P E+PA PDPRKDLAERIA+EKKWRQST Q IQ +ALQFE+T C KDDILAGNDDP Sbjct: 186 EVPSVEQPAPPDPRKDLAERIAEEKKWRQSTKQSIQFLALQFESTHCDKDDILAGNDDPN 245 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 LPL TCSTDH AYLLAPSIISGDQIQN+TSGM+QR +GYVVDLQFKS AA+ WAD+TAA Sbjct: 246 LPLATCSTDHNMAYLLAPSIISGDQIQNSTSGMNQRGVGYVVDLQFKSAAADVWADFTAA 305 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDS+VVS P I EAI GGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE Sbjct: 306 HIGTQTAFTLDSEVVSVPVINEAILGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFE 365 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SEAQTVSATLGLTS SL SG ++FAIL Sbjct: 366 PSEAQTVSATLGLTSLRAGLIAGAIGLSLVLLYSLLYYRVLGLLTAFSLFCSGTIIFAIL 425 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGRYINY SFVVFFERIKDEIREGRSFRSAVPRGW RARK Sbjct: 426 VLLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWVRARK 485 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVL+FLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP LA Sbjct: 486 TIVSGNAVTFLAAAVLHFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPLLA 545 Query: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 +PAYNGLGAVQQVARERRAS AKTGRG Sbjct: 546 RPAYNGLGAVQQVARERRAS--------AKTGRG 571 Score = 179 bits (454), Expect = 1e-42 Identities = 93/125 (74%), Positives = 101/125 (80%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVH RYLS+FLVL IGVYLL FLTGDK+ P+LGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHFGRYLSMFLVLFIGVYLLAFLTGDKRVVPRLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSREAL+QAQQIIS+R LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 RPSREALSQAQQIISSRVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+NS+ Sbjct: 121 VLNSL 125 >tr|B8ZUI6|B8ZUI6_MYCLB Tax_Id=561304 (secD)SubName: Full=Putative uncharacterized protein secD;[Mycobacterium leprae] Length = 597 Score = 545 bits (1404), Expect = e-153 Identities = 290/394 (73%), Positives = 310/394 (78%), Gaps = 8/394 (2%) Query: 222 DLPPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPK 281 ++P E+PA PDPRKDLAERIA+EKKWRQST Q IQ +ALQFE+T C KDDILAGNDDP Sbjct: 212 EVPSVEQPAPPDPRKDLAERIAEEKKWRQSTKQSIQFLALQFESTHCDKDDILAGNDDPN 271 Query: 282 LPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAA 341 LPL TCSTDH AYLLAPSIISGDQIQN+TSGM+QR +GYVVDLQFKS AA+ WAD+TAA Sbjct: 272 LPLATCSTDHNMAYLLAPSIISGDQIQNSTSGMNQRGVGYVVDLQFKSAAADVWADFTAA 331 Query: 342 HIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 HIGTQTAFTLDS+VVS P I EAI GGRTQISGG+PPF+A+TARQLANVLKYGSLPLSFE Sbjct: 332 HIGTQTAFTLDSEVVSVPVINEAILGGRTQISGGDPPFTAATARQLANVLKYGSLPLSFE 391 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 SEAQTVSATLGLTS SL SG ++FAIL Sbjct: 392 PSEAQTVSATLGLTSLRAGLIAGAIGLSLVLLYSLLYYRVLGLLTAFSLFCSGTIIFAIL 451 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGRYINY SFVVFFERIKDEIREGRSFRSAVPRGW RARK Sbjct: 452 VLLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWVRARK 511 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TIVSGNAVTFLAAAVL+FLAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP LA Sbjct: 512 TIVSGNAVTFLAAAVLHFLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSPLLA 571 Query: 582 KPAYNGLGAVQQVARERRASDSRTRSGIAKTGRG 615 +PAYNGLGAVQQVARERRAS AKTGRG Sbjct: 572 RPAYNGLGAVQQVARERRAS--------AKTGRG 597 Score = 180 bits (457), Expect = 4e-43 Identities = 94/125 (75%), Positives = 101/125 (80%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 VASSSAPVH RYLS+FLVL IGVYLL FLTGDK+ P+LGIDLQGGTRVTLTARTPDGS Sbjct: 27 VASSSAPVHFGRYLSMFLVLFIGVYLLAFLTGDKRVVPRLGIDLQGGTRVTLTARTPDGS 86 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSREAL+QAQQIIS+R LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 87 RPSREALSQAQQIISSRVNGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 146 Query: 121 VMNSM 125 V+NS+ Sbjct: 147 VLNSL 151 >tr|Q1B9Q0|Q1B9Q0_MYCSS Tax_Id=164756 SubName: Full=Protein-export membrane protein SecD;[Mycobacterium sp.] Length = 598 Score = 483 bits (1243), Expect = e-134 Identities = 258/381 (67%), Positives = 292/381 (76%), Gaps = 3/381 (0%) Query: 225 PGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPL 284 P P P+ R DLA+RIA EK+ RQST+ IQ++ALQF+AT+CG+DD+LAGNDDP LPL Sbjct: 217 PSPTPGPPNKRADLAQRIADEKQLRQSTDPSIQLLALQFQATRCGEDDVLAGNDDPNLPL 276 Query: 285 VTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIG 344 +TCSTD +T YLL SIISG+QI NA+SG+D + Y+VDL+FKS AA WAD+TAA++G Sbjct: 277 ITCSTDGQTVYLLNKSIISGEQIANASSGLDNQRGEYIVDLEFKSDAAKIWADFTAANVG 336 Query: 345 TQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSE 404 TQTAFTLDSQVVSAP+I EAIPGGRTQI+G F+A +AR+LANVLKYGSLPLSFESSE Sbjct: 337 TQTAFTLDSQVVSAPEIQEAIPGGRTQING---RFTADSARELANVLKYGSLPLSFESSE 393 Query: 405 AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLL 464 A+TVSATLGL S SL+ASGAMVFAILVLL Sbjct: 394 AETVSATLGLASLKAGLIAGAVGLAAVLLYSLLYYRLLGVLIALSLVASGAMVFAILVLL 453 Query: 465 GRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 524 GRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV Sbjct: 454 GRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 513 Query: 525 SGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPA 584 SGNAVTFLAAAVLYFLA+GQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASK+ AKP Sbjct: 514 SGNAVTFLAAAVLYFLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKTTWAAKPK 573 Query: 585 YNGLGAVQQVARERRASDSRT 605 +NGLGAVQQ+ARERRA+ T Sbjct: 574 FNGLGAVQQIARERRAAAHAT 594 Score = 186 bits (473), Expect = 6e-45 Identities = 97/125 (77%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLS+FLVLL+G +LLVFLTGDKKA PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSLFLVLLVGAFLLVFLTGDKKADPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSRE+LAQAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 PPSRESLAQAQQIISARVDGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+++M Sbjct: 121 VVHAM 125 >tr|A3PYX4|A3PYX4_MYCSJ Tax_Id=164757 SubName: Full=Protein-export membrane protein SecD;[Mycobacterium sp.] Length = 598 Score = 483 bits (1243), Expect = e-134 Identities = 258/381 (67%), Positives = 292/381 (76%), Gaps = 3/381 (0%) Query: 225 PGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPL 284 P P P+ R DLA+RIA EK+ RQST+ IQ++ALQF+AT+CG+DD+LAGNDDP LPL Sbjct: 217 PSPTPGPPNKRADLAQRIADEKQLRQSTDPSIQLLALQFQATRCGEDDVLAGNDDPNLPL 276 Query: 285 VTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIG 344 +TCSTD +T YLL SIISG+QI NA+SG+D + Y+VDL+FKS AA WAD+TAA++G Sbjct: 277 ITCSTDGQTVYLLNKSIISGEQIANASSGLDNQRGEYIVDLEFKSDAAKIWADFTAANVG 336 Query: 345 TQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSE 404 TQTAFTLDSQVVSAP+I EAIPGGRTQI+G F+A +AR+LANVLKYGSLPLSFESSE Sbjct: 337 TQTAFTLDSQVVSAPEIQEAIPGGRTQING---RFTADSARELANVLKYGSLPLSFESSE 393 Query: 405 AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLL 464 A+TVSATLGL S SL+ASGAMVFAILVLL Sbjct: 394 AETVSATLGLASLKAGLIAGAVGLAAVLLYSLLYYRLLGVLIALSLVASGAMVFAILVLL 453 Query: 465 GRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 524 GRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV Sbjct: 454 GRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 513 Query: 525 SGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPA 584 SGNAVTFLAAAVLYFLA+GQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASK+ AKP Sbjct: 514 SGNAVTFLAAAVLYFLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKTTWAAKPK 573 Query: 585 YNGLGAVQQVARERRASDSRT 605 +NGLGAVQQ+ARERRA+ T Sbjct: 574 FNGLGAVQQIARERRAAAHAT 594 Score = 186 bits (473), Expect = 6e-45 Identities = 97/125 (77%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLS+FLVLL+G +LLVFLTGDKKA PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSLFLVLLVGAFLLVFLTGDKKADPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSRE+LAQAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 PPSRESLAQAQQIISARVDGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+++M Sbjct: 121 VVHAM 125 >tr|A1UFB3|A1UFB3_MYCSK Tax_Id=189918 SubName: Full=Protein-export membrane protein SecD;[Mycobacterium sp.] Length = 598 Score = 483 bits (1243), Expect = e-134 Identities = 258/381 (67%), Positives = 292/381 (76%), Gaps = 3/381 (0%) Query: 225 PGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPL 284 P P P+ R DLA+RIA EK+ RQST+ IQ++ALQF+AT+CG+DD+LAGNDDP LPL Sbjct: 217 PSPTPGPPNKRADLAQRIADEKQLRQSTDPSIQLLALQFQATRCGEDDVLAGNDDPNLPL 276 Query: 285 VTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIG 344 +TCSTD +T YLL SIISG+QI NA+SG+D + Y+VDL+FKS AA WAD+TAA++G Sbjct: 277 ITCSTDGQTVYLLNKSIISGEQIANASSGLDNQRGEYIVDLEFKSDAAKIWADFTAANVG 336 Query: 345 TQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSE 404 TQTAFTLDSQVVSAP+I EAIPGGRTQI+G F+A +AR+LANVLKYGSLPLSFESSE Sbjct: 337 TQTAFTLDSQVVSAPEIQEAIPGGRTQING---RFTADSARELANVLKYGSLPLSFESSE 393 Query: 405 AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLL 464 A+TVSATLGL S SL+ASGAMVFAILVLL Sbjct: 394 AETVSATLGLASLKAGLIAGAVGLAAVLLYSLLYYRLLGVLIALSLVASGAMVFAILVLL 453 Query: 465 GRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 524 GRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV Sbjct: 454 GRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 513 Query: 525 SGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPA 584 SGNAVTFLAAAVLYFLA+GQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASK+ AKP Sbjct: 514 SGNAVTFLAAAVLYFLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKTTWAAKPK 573 Query: 585 YNGLGAVQQVARERRASDSRT 605 +NGLGAVQQ+ARERRA+ T Sbjct: 574 FNGLGAVQQIARERRAAAHAT 594 Score = 186 bits (473), Expect = 6e-45 Identities = 97/125 (77%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYLS+FLVLL+G +LLVFLTGDKKA PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLSLFLVLLVGAFLLVFLTGDKKADPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSRE+LAQAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 PPSRESLAQAQQIISARVDGLGVSGSEVVVDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+++M Sbjct: 121 VVHAM 125 >tr|A0QWJ2|A0QWJ2_MYCS2 Tax_Id=246196 (secD)SubName: Full=Protein-export membrane protein SecD;[Mycobacterium smegmatis] Length = 620 Score = 463 bits (1192), Expect = e-128 Identities = 250/381 (65%), Positives = 287/381 (75%), Gaps = 9/381 (2%) Query: 225 PGEEP-ALPDP-----RKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGND 278 PGE P A P P + DLA+RIA K+WRQST+ +Q++ LQ +A CG+DDILAGND Sbjct: 233 PGENPPAAPAPGADGDKADLAQRIATAKQWRQSTDPTMQILGLQVQANLCGEDDILAGND 292 Query: 279 DPKLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADY 338 DP LPL+TCSTD T YLL SI+SG++I+NATSG+DQ+ YVVD++FKS A TWAD+ Sbjct: 293 DPNLPLITCSTDGSTVYLLNKSIMSGEEIKNATSGLDQQQGQYVVDVEFKSGGAQTWADF 352 Query: 339 TAAHIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPL 398 TAA++GTQTAFTLDS+VVSAP+I EAIPGG TQI+G F+A +A++LANVLKYGSLPL Sbjct: 353 TAANVGTQTAFTLDSKVVSAPEIREAIPGGNTQITG---QFTADSAKELANVLKYGSLPL 409 Query: 399 SFESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVF 458 SFESSEA+TVSATLGL+S SL+A+GA+V+ Sbjct: 410 SFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLVALSLVAAGAVVY 469 Query: 459 AILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWAR 518 AILVLLGRYI Y SFVVFFERIKDEIREGRSFRSAVPRGW R Sbjct: 470 AILVLLGRYIGYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWVR 529 Query: 519 ARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSP 578 ARKTIVSGNAVTFLAAAVLY LAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP Sbjct: 530 ARKTIVSGNAVTFLAAAVLYVLAIGQVKGFAFTLGLTTILDLVVVFLVTWPLVYLASKSP 589 Query: 579 RLAKPAYNGLGAVQQVARERR 599 +AKP NGLGAVQQ+ARERR Sbjct: 590 TMAKPKLNGLGAVQQIARERR 610 Score = 185 bits (470), Expect = 1e-44 Identities = 96/125 (76%), Positives = 105/125 (84%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHPARYL++FLVLL+GVYLLVFLTGDKK PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPARYLTLFLVLLVGVYLLVFLTGDKKPEPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 AP+R+AL QAQQIISAR LVITVPGNDGNEARNLGQTARLYIRP Sbjct: 61 APTRDALNQAQQIISARVDGLGVSGSEVVIDGDNLVITVPGNDGNEARNLGQTARLYIRP 120 Query: 121 VMNSM 125 V+++M Sbjct: 121 VIHAM 125 >tr|A1T891|A1T891_MYCVP Tax_Id=350058 SubName: Full=Protein-export membrane protein SecD;[Mycobacterium vanbaalenii] Length = 599 Score = 461 bits (1186), Expect = e-127 Identities = 255/386 (66%), Positives = 286/386 (74%), Gaps = 4/386 (1%) Query: 224 PPGEEPALP-DPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKL 282 PP A P D LA RI EK+ RQST Q IQ++ALQF+AT+CG++D+LAGNDDP L Sbjct: 217 PPAPGTAPPADQDVPLATRIQDEKRLRQSTEQAIQILALQFQATRCGQEDVLAGNDDPNL 276 Query: 283 PLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAH 342 PLVTCS D YLL SIISG+QI NA+SG++Q++ YVVD++FKS AA WAD+TAA+ Sbjct: 277 PLVTCSQDGNEVYLLDKSIISGEQIANASSGLNQQAGEYVVDVEFKSDAAKVWADFTAAN 336 Query: 343 IGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFES 402 +GTQTAF LDSQVVSAP I EAIPGGRTQI+G F+ +TAR+LANVLKYGSLPLSFES Sbjct: 337 VGTQTAFVLDSQVVSAPVIQEAIPGGRTQITG---QFTQTTARELANVLKYGSLPLSFES 393 Query: 403 SEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILV 462 SEA+TVSATLGL+S SL ASGAMVFAILV Sbjct: 394 SEAETVSATLGLSSLRAGLIAGVVGLVAVLLYSLLYYRVLGVLIALSLTASGAMVFAILV 453 Query: 463 LLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKT 522 LLGRYI+Y SFVVFFERIKDEIREGRSFRSAVPRGWARARKT Sbjct: 454 LLGRYISYTLDLAGIAGLIIGIGMTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKT 513 Query: 523 IVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAK 582 IVSGNAVT LAAAVLYFLA+GQVKGFAFTLGLTTILDIVVVFLVTWPLVY+ASKS AK Sbjct: 514 IVSGNAVTLLAAAVLYFLAVGQVKGFAFTLGLTTILDIVVVFLVTWPLVYMASKSTLWAK 573 Query: 583 PAYNGLGAVQQVARERRASDSRTRSG 608 P+ NGLGAVQQ+ARERRA+ S G Sbjct: 574 PSLNGLGAVQQIARERRAAASAAGRG 599 Score = 159 bits (402), Expect = 1e-36 Identities = 83/121 (68%), Positives = 95/121 (78%) Query: 3 SSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAP 62 +SS+ VHPARYL++FL +LIG YLLVFLTGDKK PKLGIDLQGGTRVTLTARTPDGS P Sbjct: 2 ASSSTVHPARYLALFLAMLIGAYLLVFLTGDKKPDPKLGIDLQGGTRVTLTARTPDGSPP 61 Query: 63 SREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 SRE+L QA+QII AR LVITVPG+D +EAR+LGQTARLYIRPV+ Sbjct: 62 SRESLDQAKQIIGARVDGLGVSGSEVIIDGQNLVITVPGDDTSEARSLGQTARLYIRPVV 121 Query: 123 N 123 + Sbjct: 122 H 122 >tr|A4TBR5|A4TBR5_MYCGI Tax_Id=350054 SubName: Full=Protein-export membrane protein SecD;[Mycobacterium gilvum] Length = 617 Score = 458 bits (1178), Expect = e-126 Identities = 247/384 (64%), Positives = 288/384 (75%), Gaps = 4/384 (1%) Query: 225 PGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPL 284 PG PA D LA++I QEK RQS++Q IQ++A+Q +A+QCG++D+LAGNDDP LPL Sbjct: 238 PGGMPA-DDENLSLADQIKQEKLRRQSSDQMIQILAMQLQASQCGQEDVLAGNDDPNLPL 296 Query: 285 VTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIG 344 +TCS D T YLL SII+G++I NATSG++Q++ YVVDL+FK Q + TWA++TAA++G Sbjct: 297 ITCSQDGTTVYLLDKSIIAGEEIANATSGLNQQAGEYVVDLEFKDQGSKTWAEFTAANVG 356 Query: 345 TQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSE 404 QTAF LDS+VVSAP I E IPGG+TQI+G F+ TAR+LANVLKYGSLPLSFESSE Sbjct: 357 VQTAFVLDSKVVSAPVINEPIPGGKTQITG---QFTQDTARELANVLKYGSLPLSFESSE 413 Query: 405 AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLL 464 A+TVSATLGL+S SL+ASGAMVFAILVLL Sbjct: 414 AETVSATLGLSSLRAGLIAGAVGLAAVLLYSLLYYRALGVLIALSLVASGAMVFAILVLL 473 Query: 465 GRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIV 524 GRYINY SFVVFFERIKDEIREGRSFRSAVPRGWARARKTI+ Sbjct: 474 GRYINYTLDLAGIAGLIIGIGMTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIL 533 Query: 525 SGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPA 584 SGNAVTFLAAAVLYFLA+GQVKGFAFTLGLTTILD+VVVFLVTWPLVYLASKSP AKP+ Sbjct: 534 SGNAVTFLAAAVLYFLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKSPLWAKPS 593 Query: 585 YNGLGAVQQVARERRASDSRTRSG 608 NGLGAVQQ+ARERRA+ + G Sbjct: 594 LNGLGAVQQIARERRAAATAAGRG 617 Score = 162 bits (411), Expect = 9e-38 Identities = 85/123 (69%), Positives = 98/123 (79%) Query: 3 SSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAP 62 +SS+ VHPARYL++FLVLLIG +LLVF TGDKK PKLGIDLQGGTRVTLTARTPDGS P Sbjct: 2 ASSSTVHPARYLALFLVLLIGAFLLVFFTGDKKPDPKLGIDLQGGTRVTLTARTPDGSEP 61 Query: 63 SREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 SR+AL QAQQIISAR LVITVPG+D +EAR+LGQTARLYIRPV+ Sbjct: 62 SRDALLQAQQIISARVDGLGVSGSEVIIDGNNLVITVPGDDTSEARSLGQTARLYIRPVV 121 Query: 123 NSM 125 +++ Sbjct: 122 HAI 124 >tr|B1MCI8|B1MCI8_MYCA9 Tax_Id=561007 SubName: Full=Probable protein-export membrane protein SecD;[Mycobacterium abscessus] Length = 586 Score = 420 bits (1080), Expect = e-115 Identities = 236/384 (61%), Positives = 275/384 (71%), Gaps = 9/384 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQC-GKDDILAGNDDPKL 282 PP + P P ++ + I EK+ RQS + IQM+ALQ +A++C DD LAGNDDP L Sbjct: 203 PPADLPPKPGSGEERKQLIDFEKQIRQSEDPRIQMLALQVQASRCYDPDDPLAGNDDPNL 262 Query: 283 PLVTCSTDH---KTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYT 339 PLVTC D K AYLL SIISG++I++A+SG+DQ+ YVV ++FK A WADYT Sbjct: 263 PLVTCGDDSQGGKAAYLLDKSIISGEEIKDASSGLDQQRGIYVVSMEFKPTGAKVWADYT 322 Query: 340 AAHI--GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLP 397 +AH GTQTAFTLDS+V+SAP I E IPGG+T+ISG F++ +A+QLA LKYGSLP Sbjct: 323 SAHWQQGTQTAFTLDSKVISAPAIREPIPGGKTEISG---QFTSDSAKQLAAALKYGSLP 379 Query: 398 LSFESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMV 457 LSFESS+AQTVSATLGLTS SL+ASGAMV Sbjct: 380 LSFESSDAQTVSATLGLTSLKAGLIAGAIGLAIVLLYSLIYYRVLGLLTALSLVASGAMV 439 Query: 458 FAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWA 517 FAILVLLGRYI+Y SFVVFFERIKDEIREGRS+RSAVPRGWA Sbjct: 440 FAILVLLGRYISYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSYRSAVPRGWA 499 Query: 518 RARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKS 577 RARKTI+SGNAVT LAA VLY LAIGQVKGFAFTLGLTTILD+VVVFLVTWPLVYL+SKS Sbjct: 500 RARKTILSGNAVTLLAAVVLYILAIGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLSSKS 559 Query: 578 PRLAKPAYNGLGAVQQVARERRAS 601 L+KPAYNGLGAVQQ+ARER+A+ Sbjct: 560 ATLSKPAYNGLGAVQQIARERKAA 583 Score = 173 bits (438), Expect = 7e-41 Identities = 89/125 (71%), Positives = 100/125 (80%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +ASSSAPVHP RYL+ FLVLLIG YLLVFLTGDK+ PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MASSSAPVHPMRYLAAFLVLLIGAYLLVFLTGDKQPKPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 P++EAL QAQQII+AR LVITVPGNDG+EARNLGQTA+LYIRP Sbjct: 61 KPTKEALTQAQQIINARVNGLGVSGSEVIIDGDNLVITVPGNDGSEARNLGQTAKLYIRP 120 Query: 121 VMNSM 125 V+ ++ Sbjct: 121 VVQAV 125 >tr|Q0S1C4|Q0S1C4_RHOSR Tax_Id=101510 SubName: Full=Protein-export membrane protein;[Rhodococcus sp.] Length = 556 Score = 374 bits (961), Expect = e-101 Identities = 210/382 (54%), Positives = 254/382 (66%), Gaps = 10/382 (2%) Query: 225 PGEEPALPDPR----KDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 P EPA D + A+ IA + RQST+ +Q A+ C D L GNDDP Sbjct: 171 PTAEPAPADASGTETAEAADEIAAARATRQSTDPAVQQQAMA--TLDCSVPDPLRGNDDP 228 Query: 281 KLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTA 340 LPLV CSTD + YLL P+II G +I +ATSG + + + V L FKS+ +NTWA +T+ Sbjct: 229 ALPLVACSTDGQAVYLLEPAIIDGQEIADATSGYNSQQSRHEVSLTFKSEGSNTWATFTS 288 Query: 341 AHIGTQTAFTLDSQVVSAPQILEAIPGGR-TQISGGEPPFSASTARQLANVLKYGSLPLS 399 +IG Q AFTLDS+VVSAP + A P G T I+G FSA +A++LAN LKYGSLPLS Sbjct: 289 QNIGKQAAFTLDSKVVSAPVVQGATPAGSSTSITGS---FSAESAKELANTLKYGSLPLS 345 Query: 400 FESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFA 459 F +SEA+TVSATLGL S SL+ SG MV+A Sbjct: 346 FAASEAETVSATLGLASLEAGLIAGLVGLVLVLLYCLLYYRMLGVLTALSLVLSGVMVYA 405 Query: 460 ILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARA 519 I+VLLGRYIN+ SFVVFFERIKDE+REGRSFRSAVPRGWARA Sbjct: 406 IMVLLGRYINFTLDLAGIAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARA 465 Query: 520 RKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPR 579 R+TI+SGNAV+F+AAAVLY LA+GQV+GFAFTLGLTTILD+VVVFLVTWPLV+LASKSP Sbjct: 466 RRTILSGNAVSFIAAAVLYILAVGQVRGFAFTLGLTTILDVVVVFLVTWPLVHLASKSPF 525 Query: 580 LAKPAYNGLGAVQQVARERRAS 601 +KP NGLGAVQQ+A+ER+A+ Sbjct: 526 WSKPGVNGLGAVQQIAKERKAA 547 Score = 143 bits (360), Expect = 8e-32 Identities = 74/124 (59%), Positives = 87/124 (70%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A S+ VHP RYL+VF VL+ +Y LVF TGDK A PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MAPSTGSVHPVRYLTVFAVLVAVLYALVFFTGDKSATPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 P+ ++L QAQ+II R LVITVPG+D +AR+LGQTARLY+RP Sbjct: 61 KPTPDSLRQAQEIIETRVNGLGVSGSEVVIDGDNLVITVPGDDSAQARSLGQTARLYVRP 120 Query: 121 VMNS 124 V S Sbjct: 121 VQTS 124 >tr|C1B4D3|C1B4D3_RHOOB Tax_Id=632772 (secD)SubName: Full=Protein-export membrane protein SecD;[Rhodococcus opacus] Length = 556 Score = 370 bits (951), Expect = e-100 Identities = 208/382 (54%), Positives = 253/382 (66%), Gaps = 10/382 (2%) Query: 225 PGEEPALPDPR----KDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 P EPA D A+ IA + RQST+ +Q A+ C D L GNDDP Sbjct: 171 PTAEPAPADESGTETAQAADEIAAARATRQSTDPAVQQQAMA--TLDCSVPDPLRGNDDP 228 Query: 281 KLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTA 340 LPLV CSTD + YLL P+II G +I +ATSG + + + V L FKS+ +NTWA +T+ Sbjct: 229 ALPLVACSTDGQAVYLLDPAIIDGQEIADATSGYNSQQSRHEVSLTFKSEGSNTWATFTS 288 Query: 341 AHIGTQTAFTLDSQVVSAPQILEAIPGGR-TQISGGEPPFSASTARQLANVLKYGSLPLS 399 +IG Q AFTLDS+VVSAP + A P G T I+G F+A +A++LAN LKYGSLPLS Sbjct: 289 QNIGKQAAFTLDSKVVSAPVVQGATPAGSSTSITGS---FTADSAKELANTLKYGSLPLS 345 Query: 400 FESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFA 459 F +SEA+TVSATLGL S SL+ SG MV+A Sbjct: 346 FAASEAETVSATLGLASLEAGLIAGLVGLVLVLLYCLLYYRMLGVLTALSLVLSGVMVYA 405 Query: 460 ILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARA 519 I+VLLGRYIN+ SFVVFFERIKDE+REGRSFRSAVPRGWARA Sbjct: 406 IMVLLGRYINFTLDLAGIAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARA 465 Query: 520 RKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPR 579 R+TI+SGNAV+F+AAAVLY LA+GQV+GFAFTLGLTTILD+VVVFLVTWPLV+LASKSP Sbjct: 466 RRTILSGNAVSFIAAAVLYVLAVGQVRGFAFTLGLTTILDVVVVFLVTWPLVHLASKSPF 525 Query: 580 LAKPAYNGLGAVQQVARERRAS 601 ++P NGLGAVQQ+A+ER+A+ Sbjct: 526 WSRPGVNGLGAVQQIAKERKAA 547 Score = 143 bits (360), Expect = 8e-32 Identities = 74/124 (59%), Positives = 87/124 (70%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A S+ VHP RYL+VF VL+ +Y LVF TGDK A PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MAPSTGSVHPVRYLTVFAVLVAVLYALVFFTGDKSATPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 P+ ++L QAQ+II R LVITVPG+D +AR+LGQTARLY+RP Sbjct: 61 KPTPDSLRQAQEIIETRVNGLGVSGSEVVIDGDNLVITVPGDDSAQARSLGQTARLYVRP 120 Query: 121 VMNS 124 V S Sbjct: 121 VQTS 124 >tr|Q5YTF2|Q5YTF2_NOCFA Tax_Id=37329 (secD)SubName: Full=Putative uncharacterized protein secD;[Nocardia farcinica] Length = 561 Score = 357 bits (916), Expect = 3e-96 Identities = 201/382 (52%), Positives = 255/382 (66%), Gaps = 8/382 (2%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 PP + P++ I K+ RQST+ +Q A+ A C K D LAGNDDP LP Sbjct: 178 PPTTDDDNLTPQERAQREITAAKQTRQSTDPAVQQAAMA--ALDCSKQDPLAGNDDPNLP 235 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 LVTCS D +LL + I G +I++A + +DQ+ +VVDL+FKS ++ WA T ++ Sbjct: 236 LVTCSQDGTEVFLLDKTRIDGQEIKDAVANLDQQQSRWVVDLEFKSSGSDAWASLTGEYL 295 Query: 344 GTQTAFTLDSQVVSAPQILEAIP--GGRTQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 + AFTLDS+VVSAPQ+ +A P GGRTQISG F+A++A++LAN LKYGSLPLSF+ Sbjct: 296 YKRVAFTLDSEVVSAPQV-QAGPQLGGRTQISG---QFTAASAKELANTLKYGSLPLSFQ 351 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 +SEA+TVSATLGL+S SL+ASG V+ ++ Sbjct: 352 TSEAETVSATLGLSSMRAGLIAGAVGLAVVLLYCLVYYRMLGLLTGLSLVASGLAVYGLM 411 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGR+I + SFVVFFERIKDE+REGRSFRSAVPRGW RAR+ Sbjct: 412 VLLGRWIGFTLDLAGIAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWQRARR 471 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TI+SGN V+F+AAAVLY LA+GQVKGFAFTLGLTTILD+VVVFLVT PLV LAS+S + Sbjct: 472 TILSGNGVSFIAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTAPLVLLASRSAFWS 531 Query: 582 KPAYNGLGAVQQVARERRASDS 603 KP+ NGLGA+Q+VARERRA++S Sbjct: 532 KPSVNGLGAIQEVARERRAAES 553 Score = 126 bits (317), Expect = 7e-27 Identities = 65/119 (54%), Positives = 78/119 (65%) Query: 4 SSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPS 63 S HP R L V+ LL +Y LVF TGD+ PKLGIDLQGGTRVTLTARTPDGS PS Sbjct: 4 SQGSAHPLRLLGVYAALLAVIYALVFFTGDQSPTPKLGIDLQGGTRVTLTARTPDGSRPS 63 Query: 64 REALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 +++L +AQ+II R +VITVPG+DG +AR L TA+LYIRPV+ Sbjct: 64 QDSLRKAQEIIENRVNGLGVGGSEVAIEGDNIVITVPGDDGQQARALATTAKLYIRPVL 122 >tr|C3JNK4|C3JNK4_RHOER Tax_Id=596309 (secD)SubName: Full=Protein-export membrane protein SecD;[Rhodococcus erythropolis SK121] Length = 573 Score = 353 bits (907), Expect = 3e-95 Identities = 205/390 (52%), Positives = 252/390 (64%), Gaps = 11/390 (2%) Query: 224 PPGEEPALPDPRKDLAE-RIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKL 282 P G+ P+ D A IA + RQS++ +Q A+ C D L GNDDP L Sbjct: 189 PTGDAPSDGTDEGDAAAAEIAAARALRQSSDPTVQQQAVA--NLDCSVADPLRGNDDPTL 246 Query: 283 PLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAH 342 PLV CS D YLL PSII G +I +A+S + + + + L FK+ +NTWA++T+A+ Sbjct: 247 PLVACSQDGLNIYLLGPSIIDGQEIADASSVFNSQQSRHEISLSFKTTGSNTWAEFTSAN 306 Query: 343 IGTQTAFTLDSQVVSAPQILEAIPGGR-TQISGGEPPFSASTARQLANVLKYGSLPLSFE 401 IG Q AFTLDS+VVSAP I A P G T I+G F+A +A++LAN LKYGSLPLSF Sbjct: 307 IGKQAAFTLDSKVVSAPTIQGATPAGSATSITGS---FTAESAKELANTLKYGSLPLSFA 363 Query: 402 SSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAIL 461 +SEA+TVSATLGL S SLI SG MV+AI+ Sbjct: 364 ASEAETVSATLGLASLQAALIAGAVGLVLVLLYCLVYYRMLGVLTALSLILSGVMVYAIM 423 Query: 462 VLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARK 521 VLLGRYI + SFVVFFERIKDE+REGRSFRSAVPRGWARAR+ Sbjct: 424 VLLGRYIGFTLDLAGMAGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARARR 483 Query: 522 TIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLA 581 TI+SGNAV+F+AAAVLY LA+GQV+GFAFTLGLTTILD++VVFLVTWPLV +AS+S + Sbjct: 484 TILSGNAVSFIAAAVLYVLAVGQVRGFAFTLGLTTILDVIVVFLVTWPLVSMASRSAFWS 543 Query: 582 KPAYNGLGAVQQVARERR----ASDSRTRS 607 KP+ NGLGAVQ+VARER+ AS TR+ Sbjct: 544 KPSVNGLGAVQEVARERKVAAAASAKETRA 573 Score = 148 bits (373), Expect = 2e-33 Identities = 76/125 (60%), Positives = 91/125 (72%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A S+ VHP RYL++F VL++ +Y LVF TGDK A PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MAPSTGTVHPVRYLALFGVLVVALYALVFFTGDKSATPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APS+++L QAQ+II R LVITVPG+D +AR+LGQTARLYIRP Sbjct: 61 APSQDSLKQAQEIIETRVNGLGVSGSEVVVDGDNLVITVPGDDSAQARSLGQTARLYIRP 120 Query: 121 VMNSM 125 V S+ Sbjct: 121 VTGSI 125 >tr|C0ZZ50|C0ZZ50_RHOE4 Tax_Id=234621 (secD)SubName: Full=Protein-export membrane protein SecD;[Rhodococcus erythropolis] Length = 573 Score = 352 bits (903), Expect = 8e-95 Identities = 201/374 (53%), Positives = 246/374 (65%), Gaps = 10/374 (2%) Query: 239 AERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAYLLA 298 A IA + RQS++ +Q A+ C D L GNDDP LPLV CS D YLL Sbjct: 205 AAEIAAARALRQSSDPTVQQQAVA--NLDCSVADPLRGNDDPTLPLVACSQDGLNIYLLG 262 Query: 299 PSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIGTQTAFTLDSQVVSA 358 PSII G +I +A+S + + + + L FK+ +NTWA++T+A+IG Q AFTLDS+VVSA Sbjct: 263 PSIIDGQEIADASSVFNSQQSRHEISLSFKTTGSNTWAEFTSANIGKQAAFTLDSKVVSA 322 Query: 359 PQILEAIPGGR-TQISGGEPPFSASTARQLANVLKYGSLPLSFESSEAQTVSATLGLTSX 417 P I A P G T I+G F+A +A++LAN LKYGSLPLSF +SEA+TVSATLGL S Sbjct: 323 PTIQGATPAGSATSITGS---FTAESAKELANTLKYGSLPLSFAASEAETVSATLGLASL 379 Query: 418 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXX 477 SLI SG MV+AI+VLLGRYI + Sbjct: 380 QAALIAGAVGLVLVLLYCLVYYRMLGVLTALSLILSGVMVYAIMVLLGRYIGFTLDLAGM 439 Query: 478 XXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVL 537 SFVVFFERIKDE+REGRSFRSAVPRGWARAR+TI+SGNAV+F+AAAVL Sbjct: 440 AGLIIGIGMTADSFVVFFERIKDEMREGRSFRSAVPRGWARARRTILSGNAVSFIAAAVL 499 Query: 538 YFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARE 597 Y LA+GQV+GFAFTLGLTTILD++VVFLVTWPLV +AS+S +KP+ NGLGAVQ+VARE Sbjct: 500 YVLAVGQVRGFAFTLGLTTILDVIVVFLVTWPLVSMASRSAFWSKPSVNGLGAVQEVARE 559 Query: 598 RR----ASDSRTRS 607 R+ AS TR+ Sbjct: 560 RKVAAAASAKETRA 573 Score = 148 bits (373), Expect = 2e-33 Identities = 76/125 (60%), Positives = 91/125 (72%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A S+ VHP RYL++F VL++ +Y LVF TGDK A PKLGIDLQGGTRVTLTARTPDGS Sbjct: 1 MAPSTGTVHPVRYLALFGVLVVALYALVFFTGDKSATPKLGIDLQGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 APS+++L QAQ+II R LVITVPG+D +AR+LGQTARLYIRP Sbjct: 61 APSQDSLKQAQEIIETRVNGLGVSGSEVVVDGDNLVITVPGDDSAQARSLGQTARLYIRP 120 Query: 121 VMNSM 125 V S+ Sbjct: 121 VTGSI 125 >tr|D0LCM8|D0LCM8_GORB4 Tax_Id=526226 SubName: Full=Protein-export membrane protein SecD;[Gordonia bronchialis] Length = 550 Score = 342 bits (878), Expect = 7e-92 Identities = 200/399 (50%), Positives = 254/399 (63%), Gaps = 12/399 (3%) Query: 225 PGEEPALPDPRKDLAER----IAQEKKWRQST----NQYIQMVALQFEATQC--GKDDIL 274 P E P P + +E+ IA+++K RQ+ Q I + Q C G D L Sbjct: 148 PKPEDQAPPPGQTQSEQVQQAIAEQRKLRQAPANADQQTIARLQAQMAQMNCAEGTSDPL 207 Query: 275 AGNDDPKLPLVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANT 334 GND P LV CS D YLL P II G I+ A++ D ++ ++V L FK AA+ Sbjct: 208 MGNDLPDQYLVACSQDGSQVYLLGPEIIDGRDIKEASAETDSQTGEWIVSLTFKGDAASF 267 Query: 335 WADYTAAHIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEP-PFSASTARQLANVLKY 393 W YTA+H+GT TAFTLD++VVSAP I +AIPGG T+ISGG PF+ ++A LANVLKY Sbjct: 268 WPQYTASHVGTATAFTLDTRVVSAPVINQAIPGGSTRISGGSADPFTEASAGDLANVLKY 327 Query: 394 GSLPLSFESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIAS 453 GSLPLSF++S A+TVSATLGL+S SL+ + Sbjct: 328 GSLPLSFDASNAETVSATLGLSSLRAGLLAGAIGLLAVLIYALAYYRMLGILTFASLVLA 387 Query: 454 GAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVP 513 G MV+ I+VLLGR+I + SFVV+FERIKDE+REGRSFRSAVP Sbjct: 388 GLMVYGIMVLLGRWIGFTLDLAGIAGLIIGIGMTADSFVVYFERIKDEMREGRSFRSAVP 447 Query: 514 RGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYL 573 RGWA AR+TI SGNAV+F+AAAV+Y LA+G+V+GFAFTLGLTTILD+VVVFLVT PLV Sbjct: 448 RGWASARRTIWSGNAVSFIAAAVIYILAVGEVRGFAFTLGLTTILDVVVVFLVTHPLVVY 507 Query: 574 ASKSPRLAKPAYNGLGAVQQVARERR-ASDSRTRSGIAK 611 AS+S L++P+ NGLGAV +VAR+RR A+ + T +G AK Sbjct: 508 ASRSTFLSRPSVNGLGAVAEVARQRRVATRATTTTGPAK 546 Score = 122 bits (305), Expect = 2e-25 Identities = 67/118 (56%), Positives = 78/118 (66%) Query: 5 SAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSR 64 S + P + L+VFL LL VY L+F TG K PKLGIDLQGGTRVTLTART +G PSR Sbjct: 20 SREIPPWQPLAVFLALLAVVYGLIFFTGAKTLEPKLGIDLQGGTRVTLTARTENGQQPSR 79 Query: 65 EALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 E L +A+QII R LVITVPG DG++AR LGQTARLY+RPV+ Sbjct: 80 EQLDRAKQIIEQRVNGLGVGGSEVVINGDNLVITVPGKDGSQARTLGQTARLYVRPVI 137 >tr|C2APL5|C2APL5_TSUPA Tax_Id=521096 SubName: Full=Protein-export membrane protein SecD;[Tsukamurella paurometabola DSM 20162] Length = 538 Score = 332 bits (850), Expect = 1e-88 Identities = 195/395 (49%), Positives = 240/395 (60%), Gaps = 17/395 (4%) Query: 223 LPPGEEPALPDP---RKDLAER-IAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGND 278 +P +P P P D A++ + K RQST+ Q A C D LAGND Sbjct: 131 VPATPQPNAPAPDLTNPDTAKKALLDAKAARQSTDPAAQQKAAS--QLNCDATDPLAGND 188 Query: 279 DPKLPLVTC--------STDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQ 330 DPKLPLVTC + + Y LAPSII G I+NA+SG+ Q YVV L+F Sbjct: 189 DPKLPLVTCGKLENDPKNPQPRMVYTLAPSIIDGQSIKNASSGIPQNQAQYVVTLEFTGD 248 Query: 331 AANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANV 390 AA WADYT+ + G Q AF LDSQV++APQI E I GG+TQISG F+ +A LANV Sbjct: 249 AAKAWADYTSNNRGKQAAFVLDSQVITAPQINEPITGGQTQISGS---FNQQSAADLANV 305 Query: 391 LKYGSLPLSFESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL 450 LKYGSLPLSF++ AQTVSATLG S SL Sbjct: 306 LKYGSLPLSFKAGTAQTVSATLGFDSLRAGVIAGLIGLVLVLIYALAYYRALGVLVALSL 365 Query: 451 IASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRS 510 + S A+++ +LVLLGR+I Y SFVV+FERIKDEIR+GRSFRS Sbjct: 366 VLSIALLYGLLVLLGRWIGYSLDLSGIAGIIIGIGMTADSFVVYFERIKDEIRDGRSFRS 425 Query: 511 AVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPL 570 AVPRGWA AR+TI +GNAV+ L+A VLY LA+G V+GFAFTLGL+T+LD+V+VFLVT PL Sbjct: 426 AVPRGWASARRTIWTGNAVSLLSAVVLYILAVGDVRGFAFTLGLSTVLDVVIVFLVTHPL 485 Query: 571 VYLASKSPRLAKPAYNGLGAVQQVARERRASDSRT 605 V LAS++ AKP+ NGLGAV + RERR + + T Sbjct: 486 VVLASRTDFFAKPSMNGLGAVAAIGRERRRAVANT 520 Score = 110 bits (274), Expect = 7e-22 Identities = 61/118 (51%), Positives = 76/118 (64%), Gaps = 2/118 (1%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREA--L 67 P + L+ F VLLI V+ L+F TGDKK PKLGIDLQGGT VTL A PDG+ P + L Sbjct: 14 PWKPLAFFGVLLIAVFGLIFFTGDKKPEPKLGIDLQGGTSVTLQATRPDGTVPDSNSPEL 73 Query: 68 AQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVMNSM 125 QA+ II+ R LVITVPG DG++AR LGQTARL +RPV++++ Sbjct: 74 EQARDIINQRVNGLGVAGSEVKINGSNLVITVPGEDGDQARTLGQTARLLVRPVLSAV 131 >tr|A4FBB0|A4FBB0_SACEN Tax_Id=405948 SubName: Full=Preprotein translocase subunit SecD;[Saccharopolyspora erythraea] Length = 531 Score = 330 bits (846), Expect = 3e-88 Identities = 186/388 (47%), Positives = 243/388 (62%), Gaps = 15/388 (3%) Query: 227 EEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVT 286 ++PA DP I + KK RQST+ +QM ALQ A C +D L GNDDPKLPLV Sbjct: 154 QQPAPADP-------IEEAKKTRQSTDPNVQMAALQ--ALDCNAEDPLRGNDDPKLPLVA 204 Query: 287 CSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIG---YVVDLQFKSQAANTWADYTAAHI 343 C + K Y+L P + G +I +A + + G + VDL+FKS A WAD+T+A++ Sbjct: 205 CDREGKQKYVLEPVFLEGKEIDSAQASPPNPTNGNPGWSVDLKFKSAGAKVWADFTSANV 264 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 AF LD++VVSAP I + GG I+G F+ +A LAN+LKYGSLPL+F+ S Sbjct: 265 QQNAAFVLDTEVVSAPTIQAPLLGGNANITG---QFNQQSATDLANILKYGSLPLAFDQS 321 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 EA+TVSATLG+ S SL+ SGA+V+A+LVL Sbjct: 322 EAETVSATLGVASLEAGLLAGGLGLLLVAVYCLAYYRLLGLLTILSLVLSGAIVYAVLVL 381 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGR++ + SF+VFFER+KDEIREGR+FRSAVPR W RA++TI Sbjct: 382 LGRWVGFTLDLAGVAGLIIAIGITADSFIVFFERLKDEIREGRTFRSAVPRAWERAKRTI 441 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 +S +AV+FLAAAVLY LA+GQVKGFAFTLG++T+LD+VVVFLVT PLV LASK+ L+KP Sbjct: 442 LSADAVSFLAAAVLYVLAVGQVKGFAFTLGMSTVLDLVVVFLVTHPLVALASKNKFLSKP 501 Query: 584 AYNGLGAVQQVARERRASDSRTRSGIAK 611 A++GLGAVQ++ + RA R AK Sbjct: 502 AFSGLGAVQRMGAQHRADRKRAAQTTAK 529 Score = 124 bits (310), Expect = 5e-26 Identities = 65/125 (52%), Positives = 79/125 (63%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A + + P RYL++F +++ +Y LVFLTGD K PKLGIDLQGGTRVTLTARTPDG Sbjct: 1 MAPPAGQIRPGRYLAIFTLIVAALYALVFLTGDHKPLPKLGIDLQGGTRVTLTARTPDGR 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 P+ E+L QA+QII R LVITVPG G EA+ LGQTA L R Sbjct: 61 PPTNESLDQARQIIETRVNGMGISGSEVTRDGSNLVITVPGAGGEEAKQLGQTAELNFRK 120 Query: 121 VMNSM 125 V+ M Sbjct: 121 VVPGM 125 >tr|C7MQZ9|C7MQZ9_SACVD Tax_Id=471857 SubName: Full=Protein-export membrane protein SecD;[Saccharomonospora viridis] Length = 603 Score = 325 bits (833), Expect = 1e-86 Identities = 184/375 (49%), Positives = 238/375 (63%), Gaps = 15/375 (4%) Query: 239 AERIAQEKKWRQSTNQYIQMVALQFEATQ----------CGKD--DILAGNDDPKLPLVT 286 AE+I + KKWRQ Q EA Q C D D LAGNDDP LPLVT Sbjct: 224 AEQIQEAKKWRQDPALLPTGPEDQAEAQQLQQQALARLTCDPDTLDPLAGNDDPNLPLVT 283 Query: 287 CSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIGTQ 346 C+ D Y+L+P + G I NA++ D + G+VV+L F S+ A+TWAD+TA +IG + Sbjct: 284 CNQDGTEKYVLSPVFLEGTSISNASAVYDTQGGGWVVNLSFDSEGADTWADFTAQNIGER 343 Query: 347 TAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSEAQ 406 AF LD++VVSAP I EAI GG T+ISG F+ S A+ LA+VLKYGSLPLSFESS+A Sbjct: 344 AAFVLDTEVVSAPSINEAIAGGDTRISG---QFTQSEAQNLADVLKYGSLPLSFESSDAT 400 Query: 407 TVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGR 466 TVSATLG+ + SL S +V+A+LVLLGR Sbjct: 401 TVSATLGMATLKAGLIAGAIGLALVFVYCLLYYRILGVLTVLSLALSALIVYAVLVLLGR 460 Query: 467 YINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSG 526 +I+Y SFVV+FERIKDE+REGR+FRSAVPRGW +AR+TI++ Sbjct: 461 WIDYTLDIAGVVGFIVAVGVTADSFVVYFERIKDEMREGRTFRSAVPRGWVKARRTILAS 520 Query: 527 NAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYN 586 +A+ FLAA VLY LA+G+VKGFAFTLG++T+LD++VVFLVT PLV + S+S +L+ P + Sbjct: 521 DAIMFLAAGVLYVLAVGEVKGFAFTLGMSTVLDLIVVFLVTHPLVVVVSRSKKLSSPRLS 580 Query: 587 GLGAVQQVARERRAS 601 GLGAVQ++ RRA+ Sbjct: 581 GLGAVQRIGDSRRAA 595 Score = 120 bits (300), Expect = 7e-25 Identities = 62/122 (50%), Positives = 78/122 (63%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A + + P RY + F+V++ +Y LVF TGD PKLGIDL+GGTRVTLTARTPDGS Sbjct: 1 MAPPAGQIRPGRYFAFFVVIVAALYSLVFFTGDGSPTPKLGIDLKGGTRVTLTARTPDGS 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 PSRE L QA+QII R +VITVPG+ G +A+ LGQTA+L R Sbjct: 61 EPSREQLQQARQIIENRVNGIGVSGAEVLLDGNNVVITVPGDQGEQAKTLGQTAKLGFRQ 120 Query: 121 VM 122 V+ Sbjct: 121 VL 122 >tr|C8XE16|C8XE16_NAKMY Tax_Id=479431 SubName: Full=Protein-export membrane protein SecD;[Nakamurella multipartita] Length = 649 Score = 291 bits (745), Expect = 2e-76 Identities = 166/381 (43%), Positives = 224/381 (58%), Gaps = 12/381 (3%) Query: 224 PPGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLP 283 P G P +P + L A W+ S + ++ C + G DDP P Sbjct: 273 PTGSNPE--NPTQPLGTDQAAFTAWQTSAQTVMPTIS-------CADLEPYRGLDDPSKP 323 Query: 284 LVTCSTDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHI 343 L+ CS YLL P+IISG QI+ A+SG + G+VV++ FKS +TW+ YTAAH+ Sbjct: 324 LIACSDTGDAIYLLEPTIISGTQIETASSGQSTQGAGWVVNMTFKSDGYSTWSSYTAAHV 383 Query: 344 GTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESS 403 GT TA TLD QV+SAP+I AI T+ISG FS ++A LAN LK+G+LPL+F+ + Sbjct: 384 GTLTAMTLDGQVISAPRIDGAITTPGTEISGS---FSQASAASLANSLKFGALPLAFDRA 440 Query: 404 EAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVL 463 E+ VSA LG SLI S +V+ +LVL Sbjct: 441 ESVNVSAELGYQYLIAGIIAGGIGLLLVVVYCLIYYRLLGLITILSLILSFGLVYPVLVL 500 Query: 464 LGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTI 523 LGR+I Y SFV++FERIKDE+REGR+FRSAVPRGW+RA++TI Sbjct: 501 LGRWIGYSLDMAGVAGLIIAIGITADSFVIYFERIKDEVREGRTFRSAVPRGWSRAKRTI 560 Query: 524 VSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKP 583 +S +AV+FL+A +LY LA+G+VKGFAFTLGL+T+LD+VVVFLVT PLV+LA+ S P Sbjct: 561 LSADAVSFLSAFILYILAVGEVKGFAFTLGLSTVLDLVVVFLVTHPLVHLAAGSRLFQSP 620 Query: 584 AYNGLGAVQQVARERRASDSR 604 ++GLG V + +RA+ +R Sbjct: 621 TWSGLGGVAKAGARQRAAAAR 641 Score = 85.9 bits (211), Expect = 1e-14 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 4/123 (3%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A+ + P R + F+ ++I +Y LVFLT PKLGIDLQGGTR+TLTART DGS Sbjct: 1 MATPPGHLRPWRLIGTFVGIVIVLYGLVFLTPGSNT-PKLGIDLQGGTRITLTARTVDGS 59 Query: 61 APSREALAQAQQIISAR-XXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIR 119 P+RE + QA+ I+ R LV+TVPGN+ + L +TA+L IR Sbjct: 60 DPTREQMQQARTIMEGRVNGSGVVGAQVQIDGANQLVVTVPGNE--DLSGLTRTAQLNIR 117 Query: 120 PVM 122 PV+ Sbjct: 118 PVV 120 >tr|C6WCM7|C6WCM7_ACTMD Tax_Id=446462 SubName: Full=Protein-export membrane protein SecD;[Actinosynnema mirum] Length = 632 Score = 288 bits (736), Expect = 2e-75 Identities = 173/392 (44%), Positives = 217/392 (55%), Gaps = 25/392 (6%) Query: 236 KDLAERIAQEKKWRQS---TNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHK 292 +D + I + + RQ T V A C +D L GNDDP PL+TC D Sbjct: 239 EDTTKAITEARTCRQDPALTTLDASTVQQALAAFTCPTNDPLLGNDDPAQPLLTCDQDMV 298 Query: 293 TAYLLAP-----------------SIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTW 335 T Y+L P S ++G+ I NA SG D + G+VV L FK + W Sbjct: 299 TKYVLGPVTPPADGSVPDSDYSMYSRLTGEDIDNAVSGTDPQGAGFVVSLTFKGSGGDKW 358 Query: 336 ADYTAAHIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGS 395 +T+A++ Q A LDSQVVSAP I E I GG TQISG F A LANVLKYGS Sbjct: 359 GKFTSANVNQQVAVVLDSQVVSAPNINEPILGGSTQISG---QFGQREADNLANVLKYGS 415 Query: 396 LPLSFESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGA 455 LPLSFE+SEA+TVSATLGL S SL+ SG Sbjct: 416 LPLSFEASEAETVSATLGLASLEAGLIAGAVGLFLVFLYCVFYYRLLGLLTILSLVLSGV 475 Query: 456 MVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRG 515 +V+A++VLLGR + + SFVVFFER+KDE+REGRSFRSAVPR Sbjct: 476 IVYAVMVLLGRVVGFTLDLAGIAGLIIAIGITADSFVVFFERLKDEMREGRSFRSAVPRA 535 Query: 516 WARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLAS 575 W R+R+TI+S +AV+FL A +LY +A+GQVKGFAFTLG++T+LD++VVFLVT PLV + S Sbjct: 536 WVRSRRTILSADAVSFLCAMILYVIAVGQVKGFAFTLGVSTVLDLIVVFLVTHPLVAIIS 595 Query: 576 KSPR--LAKPAYNGLGAVQQVARERRASDSRT 605 KS L P GLG V A + + T Sbjct: 596 KSKTKFLNNPKVIGLGDVAHAAHLKAPKSTGT 627 Score = 114 bits (284), Expect = 5e-23 Identities = 59/124 (47%), Positives = 78/124 (62%) Query: 1 VASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGS 60 +A + + PA+YL F++++ +Y LVF TG+ A PKLGIDLQGGTRVTLTAR PDG Sbjct: 1 MAPPAGQIRPAKYLGAFVLIVAVLYALVFFTGNGSAIPKLGIDLQGGTRVTLTARAPDGK 60 Query: 61 APSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 P+ EAL QA+ +I R LVITVPG+D A++LGQTA+L R Sbjct: 61 TPTDEALNQARTLIETRVNGLGVSGAEVVRDGSNLVITVPGSDSEGAKSLGQTAKLNFRK 120 Query: 121 VMNS 124 V+ + Sbjct: 121 VIGA 124 >tr|C4LIX5|C4LIX5_CORK4 Tax_Id=645127 (secD)SubName: Full=Protein-export membrane protein;[Corynebacterium kroppenstedtii] Length = 648 Score = 254 bits (650), Expect = 2e-65 Identities = 155/362 (42%), Positives = 202/362 (55%), Gaps = 31/362 (8%) Query: 267 QCGKDDILAGNDDPKLPLVTCSTDHKTAYLLA-------------PSIISGDQIQN---A 310 +C D LAG DDP PLVTC D K+ +LL P ++G++I Sbjct: 240 ECKGSDPLAGQDDPAKPLVTCDQD-KSVHLLDAAPVLVGQEGKKDPQRLTGEEIDTNSPI 298 Query: 311 TSGMDQRSIGYVVDLQFKS----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP 366 T G D S + +FK+ + +TWA+ T + G Q A TLDS+V+SAP I P Sbjct: 299 TGGYDSNSGQMAITFKFKTSNKDKGGDTWAEVTQKYQGQQVAITLDSEVISAPTIQSPTP 358 Query: 367 GGRT-QISGGEPPFSASTARQLANVLKYGSLPLSF------ESSEAQTVSATLGLTSXXX 419 G T QI+G FS + A+ LAN LKYG+LP+SF + A T+ ATLG S Sbjct: 359 AGSTTQITG---KFSEAEAKDLANNLKYGALPISFAGENGEKGGTATTIPATLGFASLKA 415 Query: 420 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXX 479 SL+ S +++ LVLLGR++ Y Sbjct: 416 GLIAGGIGLILVALYALAYYRGLGVITIFSLLLSALLIYGSLVLLGRWVGYSLDLAGIAG 475 Query: 480 XXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYF 539 SFVV+FERIKDEIR+GR+FRSAVP+ W RAR+TI+SGN V+ +AA VLY Sbjct: 476 LIIGIGTTADSFVVYFERIKDEIRDGRTFRSAVPKAWERARRTILSGNLVSLIAAVVLYI 535 Query: 540 LAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERR 599 LA+G VKGFAFTLGLTT+ D+ VVFLV+ PL+ LAS+ P +KP+ NGLGAV +VA RR Sbjct: 536 LAVGDVKGFAFTLGLTTVFDLFVVFLVSAPLIILASRKPFFSKPSVNGLGAVMRVAERRR 595 Query: 600 AS 601 A+ Sbjct: 596 AA 597 Score = 114 bits (285), Expect = 4e-23 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A S+ P R + +F++ L+ VYLLVFLTG+KK PKLGIDLQGGTRVTL P GS Sbjct: 8 ARSTKSRWPYRAIGIFVIFLVAVYLLVFLTGNKKPEPKLGIDLQGGTRVTL---VPQGSQ 64 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 PS + L QA++I+ R LVITVPG+D +ARNLGQT++L RPV Sbjct: 65 PSNDQLEQARKILENRVNGMGVSGATVQTDGNTLVITVPGDDSAQARNLGQTSQLLFRPV 124 Query: 122 MN 123 +N Sbjct: 125 LN 126 >tr|A4QEN1|A4QEN1_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 633 Score = 252 bits (644), Expect = 9e-65 Identities = 160/408 (39%), Positives = 219/408 (53%), Gaps = 37/408 (9%) Query: 225 PGEEPA----LPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 P +EPA R+++ + + + RQST+ +Q+ A + D LAG DDP Sbjct: 198 PMDEPANSIEATQRRQEITDMLRTD---RQSTDPTVQIAASSLMQCTTDEMDPLAGTDDP 254 Query: 281 KLPLVTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYVVD 324 +LPLV C Y+L P+ + +G++I T G + +S + Sbjct: 255 RLPLVACDPAVGGVYVLDPAPLLNGETDEENGARLTGNEIDTNRPITGGFNAQSGQMEIS 314 Query: 325 LQFKS----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPF 379 FKS + + TW+ T+ ++ Q A TLDSQV+SAP I A P G T I+G F Sbjct: 315 FAFKSGDGEEGSATWSSLTSQYLQQQIAITLDSQVISAPVIQSATPVGSATSITGD---F 371 Query: 380 SASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXXXX 433 + + A+ LAN L+YG+LPLSF + TV +LG S Sbjct: 372 TQTEAQDLANNLRYGALPLSFAGENGERGGTTTTVPPSLGAASLKAGLIAGIVGIALVAI 431 Query: 434 XXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVV 493 +L A+G +V+ +LVLLGR+I Y SFVV Sbjct: 432 FVFAYYRVFGFVSLFTLFAAGVLVYGLLVLLGRWIGYSLDLAGIAGLIIGIGTTADSFVV 491 Query: 494 FFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLG 553 F+ERIKDEIREGRSFRSA PR W A++TIV+GN VT L A V+Y LA+G+VKGFAFTLG Sbjct: 492 FYERIKDEIREGRSFRSAAPRAWESAKRTIVTGNMVTLLGAIVIYLLAVGEVKGFAFTLG 551 Query: 554 LTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 LTT+ D+VV FL+T PLV LAS++P AKP+ NG+G V ++ ERRA+ Sbjct: 552 LTTVFDLVVTFLITAPLVILASRNPSFAKPSVNGMGRVMKLVEERRAN 599 Score = 100 bits (250), Expect = 4e-19 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A+S+ P R +++F+++++GVY LV LTGD+ A PKLGIDLQGGTRVTL P G Sbjct: 15 AASAWERWPKRAIALFVLIVVGVYALVLLTGDRSATPKLGIDLQGGTRVTL---VPQGQD 71 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 P+++ L QA+ I+ R LVITVPG D +A++LGQT++L RPV Sbjct: 72 PTQDQLNQARTILENRVNGMGVSGASVVADGNTLVITVPGEDTAQAQSLGQTSQLLFRPV 131 >tr|C0UBY0|C0UBY0_9ACTO Tax_Id=526225 SubName: Full=Protein-export membrane protein SecD;[Geodermatophilus obscurus DSM 43160] Length = 566 Score = 252 bits (644), Expect = 9e-65 Identities = 147/363 (40%), Positives = 202/363 (55%), Gaps = 18/363 (4%) Query: 228 EPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTC 287 +P+LP+P A + +E+ A Q+ C +D D P+ + C Sbjct: 188 DPSLPEPG---APPVTREE------------AAAQYATLTCDPEDTTPEVDLPESHVAAC 232 Query: 288 STDHKTAYLLAPSIISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIGTQT 347 + D YLL P+II G Q+ +A++G Q + +VV L F S A TWA YTAA++G Sbjct: 233 TEDGSAKYLLGPAIIEGTQVSDASAGTQQATGEWVVLLDFDSDAEATWAAYTAANVGNNV 292 Query: 348 AFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSFESSEAQT 407 AFTLD +V+SAP I AI T I+G F +A +LAN L+YG+LPL+F + AQ+ Sbjct: 293 AFTLDGRVISAPTIQGAITSNPTTITGS---FDQESAEELANQLRYGALPLTFTQATAQS 349 Query: 408 VSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRY 467 +S LG SL+ S +V+A+LV+LGR Sbjct: 350 ISTELGAEQLQAGLIAGAIGIALVFVYALLYYRLLGLVMIASLVLSAVVVYAVLVVLGRQ 409 Query: 468 INYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGN 527 I + SFVV+FER+KDEIREGR+ RSAVPR W RAR+TI+S + Sbjct: 410 IGFTLSLAGIAGFIVSLGITADSFVVYFERLKDEIREGRTLRSAVPRAWVRARRTILSAD 469 Query: 528 AVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNG 587 AV+FLAAA+LY LAIG VKGFAFTLG++T+LD+VVVFL T PL+ + ++ ++G Sbjct: 470 AVSFLAAAILYVLAIGDVKGFAFTLGMSTVLDLVVVFLFTHPLMAVLARYRVFGSSRFSG 529 Query: 588 LGA 590 LGA Sbjct: 530 LGA 532 Score = 96.3 bits (238), Expect = 1e-17 Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 2/112 (1%) Query: 12 RYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQ 71 RY FL+++ +Y LVFLTGD + P+LG+DL+GGT VTLTA TPDG AP L A+ Sbjct: 10 RYFGAFLLVVAVLYGLVFLTGDTRT-PQLGLDLRGGTTVTLTAATPDGQAPDPTELELAR 68 Query: 72 QIISAR-XXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 QII R +VI+VPG+DG +AR LGQTA+L RPV+ Sbjct: 69 QIIEQRVNGLGVAEAEVVTEGDSNIVISVPGDDGEQARELGQTAQLRFRPVV 120 >tr|Q8NPZ9|Q8NPZ9_CORGL Tax_Id=1718 SubName: Full=Preprotein translocase subunit SecD;[Corynebacterium glutamicum] Length = 644 Score = 250 bits (638), Expect = 4e-64 Identities = 160/408 (39%), Positives = 219/408 (53%), Gaps = 37/408 (9%) Query: 225 PGEEPA----LPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 P +EPA R+++ + + + RQST+ +Q+ A + D LAG DDP Sbjct: 198 PMDEPANSIEATQRRQEITDMLRTD---RQSTDPTVQIAASSLMQCTTDEMDPLAGTDDP 254 Query: 281 KLPLVTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYVVD 324 +LPLV C Y+L P+ + +G++I T G + +S + Sbjct: 255 RLPLVACDPAVGGVYVLDPAPLLNGETDEENGARLTGNEIDTNRPITGGFNAQSGQMEIS 314 Query: 325 LQFKS----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPF 379 FKS + + TW+ T+ ++ Q A TLDSQV+SAP I A P G T I+G F Sbjct: 315 FAFKSGDGEEGSATWSSLTSQYLQQQIAITLDSQVISAPVIQSATPVGSATSITGD---F 371 Query: 380 SASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXXXX 433 + + A+ LAN L+YG+LPLSF + TV +LG S Sbjct: 372 TQTEAQDLANNLRYGALPLSFAGENGERGGTTTTVPPSLGAASLKAGLIAGIVGIALVAI 431 Query: 434 XXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVV 493 +L A+G +V+ +LVLLGR+I Y SFVV Sbjct: 432 FVFAYYRVFGFVSLFTLFAAGVLVYGLLVLLGRWIGYSLDLAGIAGLIIGIGTTADSFVV 491 Query: 494 FFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLG 553 F+ERIKDEIREGRSFRSAVPR W A++TIV+GN VT L A V+Y LA+G+VKGFAFTLG Sbjct: 492 FYERIKDEIREGRSFRSAVPRAWESAKRTIVTGNMVTLLGAIVIYLLAVGEVKGFAFTLG 551 Query: 554 LTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 LTT+ D+VV FL+T PLV LAS++P AK + NG+G V ++ ERRA+ Sbjct: 552 LTTVFDLVVTFLITAPLVILASRNPFFAKSSVNGMGRVMKLVEERRAN 599 Score = 99.0 bits (245), Expect = 2e-18 Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A+S+ P R +++F+++++GVY LV LTGD+ A PKLGIDLQGGTRVTL P G Sbjct: 15 AASAWERWPKRAIALFVLIVVGVYALVLLTGDRSATPKLGIDLQGGTRVTL---VPQGQD 71 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 P+++ L QA+ I+ R LVITVPG + +A++LGQT++L RPV Sbjct: 72 PTQDQLNQARTILENRVNGMGVSGASVVADGNTLVITVPGENTAQAQSLGQTSQLLFRPV 131 >tr|Q9AE07|Q9AE07_CORGL Tax_Id=1718 (secD)SubName: Full=Preprotein translocase subunit SecD; SubName: Full=SecD;[Corynebacterium glutamicum] Length = 637 Score = 250 bits (638), Expect = 4e-64 Identities = 160/408 (39%), Positives = 219/408 (53%), Gaps = 37/408 (9%) Query: 225 PGEEPA----LPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 P +EPA R+++ + + + RQST+ +Q+ A + D LAG DDP Sbjct: 191 PMDEPANSIEATQRRQEITDMLRTD---RQSTDPTVQIAASSLMQCTTDEMDPLAGTDDP 247 Query: 281 KLPLVTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYVVD 324 +LPLV C Y+L P+ + +G++I T G + +S + Sbjct: 248 RLPLVACDPAVGGVYVLDPAPLLNGETDEENGARLTGNEIDTNRPITGGFNAQSGQMEIS 307 Query: 325 LQFKS----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPF 379 FKS + + TW+ T+ ++ Q A TLDSQV+SAP I A P G T I+G F Sbjct: 308 FAFKSGDGEEGSATWSSLTSQYLQQQIAITLDSQVISAPVIQSATPVGSATSITGD---F 364 Query: 380 SASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXXXX 433 + + A+ LAN L+YG+LPLSF + TV +LG S Sbjct: 365 TQTEAQDLANNLRYGALPLSFAGENGERGGTTTTVPPSLGAASLKAGLIAGIVGIALVAI 424 Query: 434 XXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVV 493 +L A+G +V+ +LVLLGR+I Y SFVV Sbjct: 425 FVFAYYRVFGFVSLFTLFAAGVLVYGLLVLLGRWIGYSLDLAGIAGLIIGIGTTADSFVV 484 Query: 494 FFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLG 553 F+ERIKDEIREGRSFRSAVPR W A++TIV+GN VT L A V+Y LA+G+VKGFAFTLG Sbjct: 485 FYERIKDEIREGRSFRSAVPRAWESAKRTIVTGNMVTLLGAIVIYLLAVGEVKGFAFTLG 544 Query: 554 LTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 LTT+ D+VV FL+T PLV LAS++P AK + NG+G V ++ ERRA+ Sbjct: 545 LTTVFDLVVTFLITAPLVILASRNPFFAKSSVNGMGRVMKLVEERRAN 592 Score = 99.0 bits (245), Expect = 2e-18 Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A+S+ P R +++F+++++GVY LV LTGD+ A PKLGIDLQGGTRVTL P G Sbjct: 8 AASAWERWPKRAIALFVLIVVGVYALVLLTGDRSATPKLGIDLQGGTRVTL---VPQGQD 64 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 P+++ L QA+ I+ R LVITVPG + +A++LGQT++L RPV Sbjct: 65 PTQDQLNQARTILENRVNGMGVSGASVVADGNTLVITVPGENTAQAQSLGQTSQLLFRPV 124 >tr|Q8FPK7|Q8FPK7_COREF Tax_Id=152794 (secD)SubName: Full=Protein-export membrane protein secD;[Corynebacterium efficiens] Length = 639 Score = 243 bits (619), Expect = 7e-62 Identities = 159/410 (38%), Positives = 217/410 (52%), Gaps = 41/410 (10%) Query: 225 PGEEPA----LPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDI--LAGND 278 P EPA + R+++ E + + RQST+ Q+ A QC D++ +AG D Sbjct: 207 PMPEPANSIEATERRQEITEMLRTD---RQSTDPTTQIAASSL--MQCTPDEMDPIAGTD 261 Query: 279 DPKLPLVTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYV 322 DP+LPLV C Y+L P+ + +G++I T G + ++ Sbjct: 262 DPRLPLVACDRASGGVYILDPAPLLQGETDEEDGARLTGNEIDTDRPITGGFNSQTGQME 321 Query: 323 VDLQFKSQAAN----TWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEP 377 ++ FKS A TWA T ++ Q A TLDS+V+SAP I A P G T I+G Sbjct: 322 INFAFKSGAGESGSATWAALTNEYLQQQIAITLDSEVISAPVIQSATPVGSATSITGD-- 379 Query: 378 PFSASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXX 431 F+ A +LAN L+YG+LPLSF + TV +LG S Sbjct: 380 -FTQEEATELANNLRYGALPLSFAGENGERGGTTTTVPPSLGAASLQAGLIAGVVGIVLV 438 Query: 432 XXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSF 491 +L+A+GA+V+ L+LLGR+I Y SF Sbjct: 439 AIFVFAYYRVFGFVSLFTLVAAGALVYGSLILLGRWIGYSLDLAGIAGLIIGIGTTADSF 498 Query: 492 VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFT 551 VVF+ERIKDE+REGRSFRSA PR W RA++TIV+GN VT + A +Y LA+G+VKGFAFT Sbjct: 499 VVFYERIKDEVREGRSFRSAAPRAWERAKRTIVTGNMVTLIGAVAIYLLAVGEVKGFAFT 558 Query: 552 LGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 LGLTT+ DI+V FLVT PLV LAS+ P AKP+ NG+ V ++ E RA+ Sbjct: 559 LGLTTVFDILVTFLVTAPLVILASRKPVFAKPSVNGMSRVYRLVDELRAN 608 Score = 100 bits (250), Expect = 4e-19 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 3/120 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A S+ P R +++F+++L GVY LVF TGD+ A PKLGIDLQGGTRVTL P G Sbjct: 23 AVSAWEAWPKRAIAIFVLILFGVYALVFFTGDRSATPKLGIDLQGGTRVTL---VPQGQE 79 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 P+++ L QA+ I+ R LVITVPG D +A+ LGQT++L RPV Sbjct: 80 PTQDQLNQARVILENRVNGMGVTGASVVADGNTLVITVPGEDVAQAQALGQTSQLLFRPV 139 >tr|C8NP77|C8NP77_COREF Tax_Id=196164 (secD)SubName: Full=Protein-export membrane protein SecD;[Corynebacterium efficiens YS-314] Length = 637 Score = 243 bits (619), Expect = 7e-62 Identities = 159/410 (38%), Positives = 217/410 (52%), Gaps = 41/410 (10%) Query: 225 PGEEPA----LPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDI--LAGND 278 P EPA + R+++ E + + RQST+ Q+ A QC D++ +AG D Sbjct: 205 PMPEPANSIEATERRQEITEMLRTD---RQSTDPTTQIAASSL--MQCTPDEMDPIAGTD 259 Query: 279 DPKLPLVTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYV 322 DP+LPLV C Y+L P+ + +G++I T G + ++ Sbjct: 260 DPRLPLVACDRASGGVYILDPAPLLQGETDEEDGARLTGNEIDTDRPITGGFNSQTGQME 319 Query: 323 VDLQFKSQAAN----TWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEP 377 ++ FKS A TWA T ++ Q A TLDS+V+SAP I A P G T I+G Sbjct: 320 INFAFKSGAGESGSATWAALTNEYLQQQIAITLDSEVISAPVIQSATPVGSATSITGD-- 377 Query: 378 PFSASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXX 431 F+ A +LAN L+YG+LPLSF + TV +LG S Sbjct: 378 -FTQEEATELANNLRYGALPLSFAGENGERGGTTTTVPPSLGAASLQAGLIAGVVGIVLV 436 Query: 432 XXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSF 491 +L+A+GA+V+ L+LLGR+I Y SF Sbjct: 437 AIFVFAYYRVFGFVSLFTLVAAGALVYGSLILLGRWIGYSLDLAGIAGLIIGIGTTADSF 496 Query: 492 VVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFT 551 VVF+ERIKDE+REGRSFRSA PR W RA++TIV+GN VT + A +Y LA+G+VKGFAFT Sbjct: 497 VVFYERIKDEVREGRSFRSAAPRAWERAKRTIVTGNMVTLIGAVAIYLLAVGEVKGFAFT 556 Query: 552 LGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 LGLTT+ DI+V FLVT PLV LAS+ P AKP+ NG+ V ++ E RA+ Sbjct: 557 LGLTTVFDILVTFLVTAPLVILASRKPVFAKPSVNGMSRVYRLVDELRAN 606 Score = 100 bits (250), Expect = 4e-19 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 3/120 (2%) Query: 2 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSA 61 A S+ P R +++F+++L GVY LVF TGD+ A PKLGIDLQGGTRVTL P G Sbjct: 21 AVSAWEAWPKRAIAIFVLILFGVYALVFFTGDRSATPKLGIDLQGGTRVTL---VPQGQE 77 Query: 62 PSREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 P+++ L QA+ I+ R LVITVPG D +A+ LGQT++L RPV Sbjct: 78 PTQDQLNQARVILENRVNGMGVTGASVVADGNTLVITVPGEDVAQAQALGQTSQLLFRPV 137 >tr|Q6NGX7|Q6NGX7_CORDI Tax_Id=1717 (secD)SubName: Full=Putative uncharacterized protein secD;[Corynebacterium diphtheriae] Length = 592 Score = 241 bits (614), Expect = 3e-61 Identities = 159/394 (40%), Positives = 210/394 (53%), Gaps = 34/394 (8%) Query: 227 EEPALPDPRKDLAERIAQE-KKWRQSTNQYIQMVALQFEATQCGKD-DILAGNDDPKLPL 284 +EPA + L ++ + KK RQST+ Q+ A +C D L G DDP PL Sbjct: 190 KEPANSIESEQLRNKVLEVMKKDRQSTDATTQLSASSL--LKCDDTPDPLQGTDDPTKPL 247 Query: 285 VTCSTDHKTAYLLAPSII-------------SGDQIQN---ATSGMDQRSIGYVVDLQFK 328 V C Y+L+P+ + +G++I T G++ ++ + FK Sbjct: 248 VACDPSSGQVYVLSPAPLLQGETDQANGKRLTGNEIDTNRPITGGLNPQTGQMEIGFSFK 307 Query: 329 S----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSAST 383 S Q + TWA T ++ Q A TLDS+++SAP I A P G T I+G FS Sbjct: 308 SDNGDQGSATWAKLTQEYLQKQVAITLDSKIISAPVIQSATPVGSATAITGS---FSQKE 364 Query: 384 ARQLANVLKYGSLPLSFESSEAQT------VSATLGLTSXXXXXXXXXXXXXXXXXXXXX 437 A+ LAN LKYG+LPLSF +T V A+LG+ S Sbjct: 365 AQDLANNLKYGALPLSFAGENGETGGTTTTVPASLGVASLKAGLIAGLVGLILVALYSLI 424 Query: 438 XXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFER 497 SL+AS A+VF LVLLGR+I Y SFVV +ER Sbjct: 425 NYRFFGLISMFSLVASFALVFGALVLLGRWIGYSLDLAGIAGLIIGIGTTADSFVVLYER 484 Query: 498 IKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTI 557 IKDE+R+GRSFRS+VPRGW RAR+TI++GNAVT + A ++Y LA+G+VKGFAFTLGLTTI Sbjct: 485 IKDEVRDGRSFRSSVPRGWERARQTIITGNAVTLIGAVIIYILAVGEVKGFAFTLGLTTI 544 Query: 558 LDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAV 591 DIVV FLVT PLV LAS+ P + A NG+G + Sbjct: 545 FDIVVTFLVTAPLVVLASRKPWTSSGAANGMGKI 578 Score = 93.2 bits (230), Expect = 9e-17 Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 3/119 (2%) Query: 3 SSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAP 62 +S++ P + L F VL+ +Y LVF T D A PKLGIDLQGGTRVTL P G P Sbjct: 9 ASNSRSWPFKSLFGFTVLIAIIYALVFATADHSARPKLGIDLQGGTRVTL---VPQGQNP 65 Query: 63 SREALAQAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 + + LAQA+ I+ R LVITVPG D +AR LGQT++L RPV Sbjct: 66 TEDQLAQAKSILENRVNGMGVSGASVVSDGNTLVITVPGEDTTQARALGQTSQLLFRPV 124 >tr|C2GHZ0|C2GHZ0_9CORY Tax_Id=548478 (secD)SubName: Full=Preprotein translocase subunit SecD;[Corynebacterium glucuronolyticum ATCC 51866] Length = 705 Score = 239 bits (609), Expect = 1e-60 Identities = 160/413 (38%), Positives = 213/413 (51%), Gaps = 40/413 (9%) Query: 226 GEEPA-----LPDPRKDLAERIAQEK------KWRQSTNQYIQMVALQF-EATQCGKDDI 273 GE P LP+P+ + E+ +++ K RQST QM A E ++ D Sbjct: 200 GEAPTVTAEPLPEPKNSIEEQKRRDEVFDMMLKDRQSTEGATQMAAAALMECSEENTHDP 259 Query: 274 LAGNDDPKLPLVTCSTDHKTAYLLAPSII-----------SGDQIQN---ATSGMDQRSI 319 +AG DD PLV C + LL PS + +G++I G++ ++ Sbjct: 260 IAGGDDLSKPLVACYPEMGQPLLLGPSPLLVGEPEDGRRLTGNEIDTNRPINGGINPQTA 319 Query: 320 GYVVDLQFKSQ----AANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISG 374 V FKS + TWA T ++ Q A TLDSQ++SAPQ+ A P G T I+G Sbjct: 320 QNEVVFTFKSDNGETGSETWAKLTQEYLNKQVAVTLDSQIISAPQVQSATPVGSSTMITG 379 Query: 375 GEPPFSASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXX 428 + + A+ LAN L+YG+LPLSF + + TLG S Sbjct: 380 MK---NEEEAKTLANNLQYGALPLSFVGENGERGGTTTVIPPTLGAASLRAGLIAGLIGL 436 Query: 429 XXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXX 488 +L+ASG +V+ LVLLGR+I Y Sbjct: 437 LAVAVFSLVNYRLYGLLAMFTLVASGTLVYGSLVLLGRWIGYSLDLAGVAGLIIGIGTTA 496 Query: 489 XSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGF 548 SFVV +ERIKDEIR+GR+FRSAVPRGW RARKTI+SGN V+ +AA VLY LA+G VKGF Sbjct: 497 DSFVVLYERIKDEIRDGRTFRSAVPRGWDRARKTIISGNFVSVIAAVVLYILAVGDVKGF 556 Query: 549 AFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 AFTLGLTT+ D+ V F VT PLV LAS+ AK + NGLG V ++ +RRA+ Sbjct: 557 AFTLGLTTVFDLAVTFFVTAPLVILASRKKFFAKASVNGLGKVYELVEQRRAA 609 Score = 81.3 bits (199), Expect = 4e-13 Identities = 51/113 (45%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 9 HPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALA 68 +P L +F ++LI VY L+F T PKLGIDLQGGTRVTL P G P+ + L Sbjct: 31 YPWGALGIFGIILILVYSLLFFTPGANT-PKLGIDLQGGTRVTLV---PQGGEPTPQQLD 86 Query: 69 QAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 QA+ I+ R LVITVPG D +ARNLGQT++L R V Sbjct: 87 QARTILENRVNGMGVSGAEVVTDGNTLVITVPGEDTAQARNLGQTSQLVFRTV 139 >tr|C0VVT1|C0VVT1_9CORY Tax_Id=548477 (secD)SubName: Full=Preprotein translocase subunit SecD;[Corynebacterium glucuronolyticum ATCC 51867] Length = 705 Score = 239 bits (609), Expect = 1e-60 Identities = 160/413 (38%), Positives = 213/413 (51%), Gaps = 40/413 (9%) Query: 226 GEEPA-----LPDPRKDLAERIAQEK------KWRQSTNQYIQMVALQF-EATQCGKDDI 273 GE P LP+P+ + E+ +++ K RQST QM A E ++ D Sbjct: 200 GEAPTVTAEPLPEPKNSIEEQKRRDEVFDMMLKDRQSTEGATQMAAAALMECSEENTHDP 259 Query: 274 LAGNDDPKLPLVTCSTDHKTAYLLAPSII-----------SGDQIQN---ATSGMDQRSI 319 +AG DD PLV C + LL PS + +G++I G++ ++ Sbjct: 260 IAGGDDLSKPLVACYPEMGQPLLLGPSPLLVGEPEDGRRLTGNEIDTNRPINGGINPQTA 319 Query: 320 GYVVDLQFKSQ----AANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISG 374 V FKS + TWA T ++ Q A TLDSQ++SAPQ+ A P G T I+G Sbjct: 320 QNEVVFTFKSDNGETGSETWAKLTQEYLNKQVAVTLDSQIISAPQVQSATPVGSSTMITG 379 Query: 375 GEPPFSASTARQLANVLKYGSLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXX 428 + + A+ LAN L+YG+LPLSF + + TLG S Sbjct: 380 MK---NEEEAKTLANNLQYGALPLSFVGENGERGGTTTVIPPTLGAASLRAGLIAGLIGL 436 Query: 429 XXXXXXXXXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXX 488 +L+ASG +V+ LVLLGR+I Y Sbjct: 437 LAVAVFSLVNYRLYGLLAMFTLVASGTLVYGSLVLLGRWIGYSLDLAGVAGLIIGIGTTA 496 Query: 489 XSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGF 548 SFVV +ERIKDEIR+GR+FRSAVPRGW RARKTI+SGN V+ +AA VLY LA+G VKGF Sbjct: 497 DSFVVLYERIKDEIRDGRTFRSAVPRGWDRARKTIISGNFVSVIAAVVLYILAVGDVKGF 556 Query: 549 AFTLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRAS 601 AFTLGLTT+ D+ V F VT PLV LAS+ AK + NGLG V ++ +RRA+ Sbjct: 557 AFTLGLTTVFDLAVTFFVTAPLVILASRKKFFAKASVNGLGKVYELVEQRRAA 609 Score = 81.3 bits (199), Expect = 4e-13 Identities = 51/113 (45%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 9 HPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALA 68 +P L +F ++LI VY L+F T PKLGIDLQGGTRVTL P G P+ + L Sbjct: 31 YPWGALGIFGIILILVYSLLFFTPGANT-PKLGIDLQGGTRVTLV---PQGGEPTPQQLD 86 Query: 69 QAQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 QA+ I+ R LVITVPG D +ARNLGQT++L R V Sbjct: 87 QARTILENRVNGMGVSGAEVVTDGNTLVITVPGEDTAQARNLGQTSQLVFRTV 139 >tr|C0E2W2|C0E2W2_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 652 Score = 238 bits (606), Expect = 2e-60 Identities = 152/390 (38%), Positives = 207/390 (53%), Gaps = 31/390 (7%) Query: 236 KDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAY 295 K E++ K RQS + Q+ A D L G+DDP LPLV C Y Sbjct: 216 KQRTEQLKVLKDDRQSKDAAKQLAASTLMVCSSAPDP-LQGSDDPALPLVACDASTNQPY 274 Query: 296 LLA--PSII-----------SGDQIQN---ATSGMDQRSIGYVVDLQFKS----QAANTW 335 +L P ++ +G++I + T G++ ++ + FK+ + + TW Sbjct: 275 ILGEVPLLVGQTDPVHGKRLTGNEIDSNRPITGGLNSQTGQMEISFAFKAGDNEKGSETW 334 Query: 336 ADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQLANVLKYG 394 AD T ++ Q A TLDS+++SAPQI P G T I+G F+ A +LAN L+YG Sbjct: 335 ADLTQKYLQQQVAITLDSKIISAPQIQSPTPVGSATSITG---KFTQDEATELANNLRYG 391 Query: 395 SLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 448 +LPLSF + TV A+LGL S Sbjct: 392 ALPLSFAGENGESGGTAITVPASLGLASLKAGLFAGLVGFALVALFSLFFYRIFGLVSLV 451 Query: 449 SLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSF 508 SL+ + +V+ LVLLGR I Y SFVV +ERIKDEIR GR+F Sbjct: 452 SLVLAEVLVYGALVLLGRLIGYSLDLAGIAGLIIGIGATADSFVVLYERIKDEIRHGRTF 511 Query: 509 RSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTW 568 RSAVP W RA++TIV+GN VT +A+ V+YFLA+G+VKGFAFTLGLTT+ D+VV +L+T Sbjct: 512 RSAVPHAWDRAKQTIVTGNFVTLIASVVVYFLAVGEVKGFAFTLGLTTVFDLVVTYLLTA 571 Query: 569 PLVYLASKSPRLAKPAYNGLGAVQQVARER 598 PLV LAS+ P AKPA+NGLG V +V ++R Sbjct: 572 PLVILASRKPWAAKPAFNGLGKVFEVVKQR 601 Score = 97.4 bits (241), Expect = 5e-18 Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 3/113 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P + ++VF + +I +Y ++FLTGD+ A PKLGIDL+GGTR+TL P G+ P+++ L Q Sbjct: 16 PKKAIAVFGLFIIAIYAVIFLTGDRSATPKLGIDLRGGTRITL---VPQGATPTQDQLQQ 72 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 A+ I+ R LVITVPG D ++AR +GQT++L RPV+ Sbjct: 73 AKNILENRVNGMGVSGANVIVDGTSLVITVPGEDTSQARAVGQTSQLLFRPVV 125 >tr|C5VCC7|C5VCC7_9CORY Tax_Id=553207 (secD)SubName: Full=Protein-export membrane protein SecD;[Corynebacterium matruchotii ATCC 14266] Length = 652 Score = 237 bits (605), Expect = 3e-60 Identities = 152/390 (38%), Positives = 207/390 (53%), Gaps = 31/390 (7%) Query: 236 KDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAY 295 K E++ K RQS + Q+ A D L G+DDP LPLV C Y Sbjct: 216 KQRTEQLKVLKDDRQSKDAAKQLAASTLMVCSSAPDP-LQGSDDPALPLVACDASTNQPY 274 Query: 296 LLA--PSII-----------SGDQIQN---ATSGMDQRSIGYVVDLQFKS----QAANTW 335 +L P ++ +G++I + T G++ ++ + FK+ + + TW Sbjct: 275 ILGEVPLLVGQTDPVHGKRLTGNEIDSNRPITGGLNSQTGQMEISFAFKAGDNEKGSETW 334 Query: 336 ADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQLANVLKYG 394 AD T ++ Q A TLDS+++SAPQI P G T I+G F+ A +LAN L+YG Sbjct: 335 ADLTQKYLQQQVAITLDSKIISAPQIQSPTPVGSATAITG---KFTQDEATELANNLRYG 391 Query: 395 SLPLSFESSEAQ------TVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 448 +LPLSF + TV A+LGL S Sbjct: 392 ALPLSFAGENGESGGTAITVPASLGLASLKAGLFAGLVGFALVALFSLFFYRIFGLVSLV 451 Query: 449 SLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSF 508 SL+ + +V+ LVLLGR I Y SFVV +ERIKDEIR GR+F Sbjct: 452 SLVLAEVLVYGALVLLGRLIGYSLDLAGIAGLIIGIGATADSFVVLYERIKDEIRHGRTF 511 Query: 509 RSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTW 568 RSAVP W RA++TIV+GN VT +A+ V+YFLA+G+VKGFAFTLGLTT+ D+VV +L+T Sbjct: 512 RSAVPHAWDRAKQTIVTGNFVTLIASVVVYFLAVGEVKGFAFTLGLTTVFDLVVTYLLTA 571 Query: 569 PLVYLASKSPRLAKPAYNGLGAVQQVARER 598 PLV LAS+ P AKPA+NGLG V +V ++R Sbjct: 572 PLVILASRKPWAAKPAFNGLGKVFEVVKQR 601 Score = 97.4 bits (241), Expect = 5e-18 Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 3/113 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P + ++VF + +I +Y ++FLTGD+ A PKLGIDL+GGTR+TL P G+ P+++ L Q Sbjct: 16 PKKAIAVFGLFIIAIYAVIFLTGDRSATPKLGIDLRGGTRITL---VPQGATPTQDQLQQ 72 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPVM 122 A+ I+ R LVITVPG D ++AR +GQT++L RPV+ Sbjct: 73 AKNILENRVNGMGVSGANVIVDGTSLVITVPGEDTSQARAVGQTSQLLFRPVV 125 >tr|C6RA68|C6RA68_9CORY Tax_Id=553206 (secD)SubName: Full=Protein-export membrane protein SecD;[Corynebacterium tuberculostearicum SK141] Length = 638 Score = 232 bits (592), Expect = 1e-58 Identities = 151/379 (39%), Positives = 199/379 (52%), Gaps = 30/379 (7%) Query: 247 KWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAYLLAPS-IISGD 305 K RQS + Q A Q G D LAG DDP P VTC + Y+L P+ +++G Sbjct: 216 KDRQSEDPTTQAAASALMTCQ-GSTDPLAGADDPAKPFVTCDYSNGNPYVLEPAPLLNGI 274 Query: 306 QIQNAT--------------SGMDQRSIGYVVDLQFKS----QAANTWADYTAAHIGTQT 347 + +N T G++ +S ++ FK+ + TWAD T H+ Q Sbjct: 275 KDENGTRLTGNEIDTNSPIEGGLNGQSGQMEINFSFKTGDGPNGSQTWADLTQEHLKDQV 334 Query: 348 AFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQLANVLKYGSLPLSF--ESSE 404 A TLDS V+SAP I A P G T I+G FS A+ LAN LKYG+LPLSF E+ E Sbjct: 335 AITLDSGVISAPVIQGATPVGSATSITGD---FSQEEAQNLANNLKYGALPLSFAGENGE 391 Query: 405 ----AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAI 460 +++ TLG + LIASG + + Sbjct: 392 PGGTVESIPPTLGKAALQAGLIAGLVGLVLVMAYSLYYFRALAGVSLIFLIASGVLTYGS 451 Query: 461 LVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARAR 520 LVLLGR+I Y SFVV++ERIKDE+ EGR+FRSA + W RAR Sbjct: 452 LVLLGRWIGYSLDLSGVAGLVIGVGATADSFVVYYERIKDELLEGRTFRSATQKAWERAR 511 Query: 521 KTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRL 580 TIV+GNAVT + + V+YFLAIG+VKGFAFT+GLTT+ D+VV FLV PL+ + + P Sbjct: 512 ATIVTGNAVTLIGSVVVYFLAIGEVKGFAFTMGLTTVFDLVVSFLVMAPLMQMVGRRPAA 571 Query: 581 AKPAYNGLGAVQQVARERR 599 AKP+ NGLG + + ERR Sbjct: 572 AKPSMNGLGGIYALVEERR 590 Score = 98.2 bits (243), Expect = 3e-18 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 3/112 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P R +++F+++++ +Y L+FLTG +++ PKLGIDLQGGTRVTL P G P+++ L Q Sbjct: 17 PKRAIALFVLIVVVIYALIFLTGSRQSTPKLGIDLQGGTRVTL---APQGEEPTQDQLKQ 73 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 A+ I+ R LVITVPG D ++A+ +GQT++L+ RPV Sbjct: 74 ARNILEQRVNGMGVSGSEVVINGNTLVITVPGEDASQAQAVGQTSQLFFRPV 125 >tr|B1VDK0|B1VDK0_CORU7 Tax_Id=504474 SubName: Full=Protein-export membrane protein SecD;[Corynebacterium urealyticum] Length = 613 Score = 232 bits (591), Expect = 1e-58 Identities = 165/409 (40%), Positives = 209/409 (51%), Gaps = 38/409 (9%) Query: 227 EEPALPDPRKDLAERIAQEK------KWRQSTNQYIQMVALQFEATQCGKDDILAGNDDP 280 +EPA +P+ + E+ ++K K RQ+ N Q A C D L+G DDP Sbjct: 185 KEPA--EPKNSVEEQKRRDKQVQILLKDRQAENADTQSAAAGL--LDCSGPDPLSGADDP 240 Query: 281 KLPLVTCSTDHKTAYLLAPSII-----------SGDQIQN---ATSGMDQRSIGYVVDLQ 326 PLVTCS AP +I +GD I T G D +S + + Sbjct: 241 AKPLVTCSPQGPMVLGPAPVLIGDENKDKPRRLTGDMIDTNSTITGGFDAQSAQMAITFR 300 Query: 327 FKS----QAANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIPGGR-TQISGGEPPFSA 381 FK+ TW + Q A TLDSQV+SAPQI A P G +QI+G F+ Sbjct: 301 FKTGKDTPGGETWYKLGQDMMNQQVAITLDSQVISAPQIQGATPPGEVSQITG---QFTE 357 Query: 382 STARQLANVLKYGSLPLSF--ESSE----AQTVSATLGLTSXXXXXXXXXXXXXXXXXXX 435 A+ LAN L+YG+LPLSF E+ E A T+S T+G S Sbjct: 358 KEAQDLANNLRYGALPLSFVGENGEPGGTATTISPTMGEASLRAGLIAGLVGLVLASLYA 417 Query: 436 XXXXXXXXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFF 495 SL+AS AMVF +LVLLGR+I Y SFVV+F Sbjct: 418 LWYYRGLGLIAIVSLVASVAMVFGLLVLLGRWIGYSLDLAGIAGLIIGIGTTADSFVVYF 477 Query: 496 ERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLT 555 ERIKDEI G +FRSAVPR W RAR TIV+GN V+ +AA +LYFLAIG VKGFAFTLGLT Sbjct: 478 ERIKDEILGGSTFRSAVPRAWDRARGTIVTGNFVSLIAAVILYFLAIGDVKGFAFTLGLT 537 Query: 556 TILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRASDSR 604 T++D+VV FL+T PL + S+ P A NGLG ++A R S +R Sbjct: 538 TVVDVVVAFLLTAPLTIMLSRKPFSANRKVNGLGPAFRLAESRGYSPTR 586 Score = 99.4 bits (246), Expect = 1e-18 Identities = 55/109 (50%), Positives = 67/109 (61%), Gaps = 3/109 (2%) Query: 12 RYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQAQ 71 R L VF V+ + VY LVF TGDK A PKLGIDLQGGTRVTL P G P+ + L QA+ Sbjct: 19 RSLLVFFVIFLAVYGLVFTTGDKSATPKLGIDLQGGTRVTL---APQGERPTADQLQQAR 75 Query: 72 QIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRP 120 +I+ +R LVITVPG D +EAR LG+T++L RP Sbjct: 76 RILESRVNGMGVSGAEVVTDGDNLVITVPGEDASEARALGKTSQLLFRP 124 >tr|A0LUK3|A0LUK3_ACIC1 Tax_Id=351607 SubName: Full=Protein-export membrane protein SecD; Flags: Precursor;[Acidothermus cellulolyticus] Length = 605 Score = 232 bits (591), Expect = 1e-58 Identities = 148/358 (41%), Positives = 194/358 (54%), Gaps = 9/358 (2%) Query: 225 PGEEPALPDPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGN--DDPKL 282 P PA P P A T Q +A ++A C K + G DDP Sbjct: 214 PTASPAAPSPSPSPAANPGYYAVPNAETAPTPQEIAA-YQALDCTKPENQKGGITDDPAK 272 Query: 283 PLVTCSTDHKTAY--LLAPSIISGDQIQNATSGMD-QRSIGYVVDLQFKSQAANTWADYT 339 LVTC Y LL P++I G +I +A++ +D Q + V L KS AA+ WA +T Sbjct: 273 FLVTCGNVDGGWYKFLLYPTLIEGKEIASASAQLDPQTGTQWTVQLTMKSGAASRWAKFT 332 Query: 340 AAHIGTQTAFTLDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLS 399 AA++ TA LD V+SA I EAIP G+TQISG F+ TA +LANVLKYG+LPL Sbjct: 333 AANVNKDTAIVLDGLVMSAEYIAEAIPNGKTQISGN---FTHKTASELANVLKYGALPLR 389 Query: 400 FESSEAQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFA 459 FE A+TVSATLG + SL S A+ + Sbjct: 390 FEQQSAETVSATLGNSELRAGLLAGMLGLLLVILYSIFYYRGLSLVTVSSLALSAAIQYP 449 Query: 460 ILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARA 519 +LVLLG+ I Y SFVVFFER++DE+REG S RSAV +GW +A Sbjct: 450 LLVLLGQGIGYTLTLAGIAGLIVAVGVTADSFVVFFERLRDEVREGNSLRSAVEKGWLQA 509 Query: 520 RKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKS 577 R+TIVS + V+ +AA +LY+LA+G V+GFAFTLGL+TI+D+ +VF T PLV L S++ Sbjct: 510 RRTIVSADLVSLIAAIILYWLAVGDVRGFAFTLGLSTIVDLFIVFAFTKPLVTLLSRT 567 Score = 48.5 bits (114), Expect = 0.003 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 3/116 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P+R L V+L +Y + TG P+LG+DL+GGT VTL A+ G + L Sbjct: 9 PSRGLLTTGVVLAALYGGMAATGHY--GPQLGLDLRGGTTVTLAAKPNPGQKVTSSELNT 66 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARN-LGQTARLYIRPVMNS 124 A I+ R +VI+VPG D + +G+TA L IR V S Sbjct: 67 AVNILRNRVNGLGVANADVHTEGTNIVISVPGKDKQGVLDKIGETALLSIRQVYAS 122 >tr|C2BPA9|C2BPA9_9CORY Tax_Id=525264 (secD)SubName: Full=Preprotein translocase subunit SecD;[Corynebacterium pseudogenitalium ATCC 33035] Length = 630 Score = 231 bits (590), Expect = 2e-58 Identities = 151/379 (39%), Positives = 198/379 (52%), Gaps = 30/379 (7%) Query: 247 KWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAYLLAPS-IISGD 305 K RQS + Q A Q G D LAG DDP P VTC Y+L P+ +++G Sbjct: 208 KDRQSEDPTTQAAASALMTCQ-GSTDPLAGADDPAKPFVTCDYSKGNPYVLEPAPLLNGI 266 Query: 306 QIQNAT--------------SGMDQRSIGYVVDLQFKS----QAANTWADYTAAHIGTQT 347 + +N T G++ +S ++ FK+ + TWAD T H+ Q Sbjct: 267 KDENGTRLTGNEIDTNSPIEGGLNGQSGQMEINFSFKTGDGPNGSQTWADLTQEHLKDQV 326 Query: 348 AFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQLANVLKYGSLPLSF--ESSE 404 A TLDS V+SAP I A P G T I+G FS A+ LAN LKYG+LPLSF E+ E Sbjct: 327 AITLDSGVISAPVIQGATPVGSATSITGD---FSQEEAQNLANNLKYGALPLSFAGENGE 383 Query: 405 ----AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIASGAMVFAI 460 +++ TLG + LIASG + + Sbjct: 384 PGGTVESIPPTLGKAALQAGLIAGLVGLVLVMAYSLYYFRALAGVSLIFLIASGVLTYGS 443 Query: 461 LVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSFRSAVPRGWARAR 520 LVLLGR+I Y SFVV++ERIKDE+ EGR+FRSA + W RAR Sbjct: 444 LVLLGRWIGYSLDLSGIAGLVIGVGATADSFVVYYERIKDELLEGRTFRSATQKAWERAR 503 Query: 521 KTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTWPLVYLASKSPRL 580 TIV+GNAVT + + V+YFLAIG+VKGFAFT+GLTT+ D+VV FLV PL+ + + P Sbjct: 504 ATIVTGNAVTLIGSVVVYFLAIGEVKGFAFTMGLTTVFDLVVSFLVMAPLMQMVGRRPAA 563 Query: 581 AKPAYNGLGAVQQVARERR 599 AKP+ NGLG + + ERR Sbjct: 564 AKPSMNGLGGIYALVEERR 582 Score = 98.2 bits (243), Expect = 3e-18 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 3/112 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P R +++F+++++ +Y L+FLTG +++ PKLGIDLQGGTRVTL P G P+++ L Q Sbjct: 9 PKRAIALFVLIVVVIYALIFLTGSRQSTPKLGIDLQGGTRVTL---APQGEEPTQDQLKQ 65 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 A+ I+ R LVITVPG D ++A+ +GQT++L+ RPV Sbjct: 66 ARNILEQRVNGMGVSGSEVVINGNTLVITVPGEDASQAQAVGQTSQLFFRPV 117 >tr|C8NUB7|C8NUB7_9CORY Tax_Id=585529 (secD)SubName: Full=Protein-export membrane protein SecD;[Corynebacterium genitalium ATCC 33030] Length = 721 Score = 230 bits (587), Expect = 4e-58 Identities = 151/404 (37%), Positives = 210/404 (51%), Gaps = 34/404 (8%) Query: 233 DPRKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKD-----DILAGNDDPKLPLVTC 287 D R++ E + ++++ T + +Q T G+D D LAG DDP PLV C Sbjct: 247 DFRQETTEMLREDRQSDDPTKLQAATILMQALCTPKGEDGTVPADPLAGTDDPTKPLVAC 306 Query: 288 STDHKTAYLL-APSIISG--------------DQIQNATSGMDQRSIGYVVDLQFKSQA- 331 + LL A ++ G D + T G + ++ ++ FK Sbjct: 307 DSSGGQPMLLEAVPLLQGVEDPEGPRLTGSEIDTNRPITGGFNPQTGQMEINFAFKQDGE 366 Query: 332 ---ANTWADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQL 387 ++TWA+ T A +G Q A TLDSQV+SAPQI P G T I+G F+ A L Sbjct: 367 FNGSSTWAELTGAMVGQQVAITLDSQVISAPQIQSPTPVGSATSITG---QFTEEEAETL 423 Query: 388 ANVLKYGSLPLSF--ESSE----AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXX 441 AN L+YG+LPLSF E+ E A TV +LG+ S Sbjct: 424 ANNLRYGALPLSFAGENGEPGGTAMTVPPSLGVASLNAGIIAGLVGLLLVAAYVFYYYRL 483 Query: 442 XXXXXXXSLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDE 501 +L A+GA+V+ LVLLGR+I Y SFVV +ERIKDE Sbjct: 484 FGVISLFTLFAAGALVYGALVLLGRWIGYTLDLSGVAGLVIGIGTTADSFVVLYERIKDE 543 Query: 502 IREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIV 561 +R GR+ RSA GW RA+ TIV+GN VT + A V+Y LA+G+VKGFAFT+GLTTI D++ Sbjct: 544 VRRGRTLRSATLNGWDRAKDTIVTGNIVTLIGAVVIYILAVGEVKGFAFTMGLTTIFDLL 603 Query: 562 VVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRASDSRT 605 V FLVT PL+ LAS++P AKP+ NG+G + A+ + A+ ++ Sbjct: 604 VTFLVTAPLMILASRNPFWAKPSVNGMGKAFEAAKSKNANPRKS 647 Score = 101 bits (251), Expect = 3e-19 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 PAR L++F ++++ Y LVF TGD+ A+PKLGIDLQGGTRVTL P G P++E L Q Sbjct: 45 PARALALFALIVVATYALVFFTGDRTASPKLGIDLQGGTRVTL---VPQGEQPTQEQLDQ 101 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 A+ I+ R LVITV G D +E RN+GQT++L RPV Sbjct: 102 ARTILENRVNGMGVSDASVVVDGNTLVITVAGEDTSEVRNIGQTSQLLFRPV 153 >tr|C0WKY1|C0WKY1_9CORY Tax_Id=525260 (secD)SubName: Full=Preprotein translocase subunit SecD;[Corynebacterium accolens ATCC 49725] Length = 627 Score = 230 bits (586), Expect = 5e-58 Identities = 149/391 (38%), Positives = 203/391 (51%), Gaps = 33/391 (8%) Query: 235 RKDLAERIAQEKKWRQSTNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTA 294 R ++ E + ++ RQS + Q A Q G D LAG DDP P VTC D T Sbjct: 199 RDEVTEMLLED---RQSDDPTTQAAASSLLTCQ-GSADPLAGADDPSKPFVTCDYDSGTP 254 Query: 295 YLLAPS-IISGDQIQNAT--------------SGMDQRSIGYVVDLQFKS----QAANTW 335 Y+L P+ +++G + ++ T G++ +S + FK+ + TW Sbjct: 255 YVLEPAPLLNGVEDEDGTRLTGNEIDTNSPINGGLNPQSGQMEISFSFKTGNGPNGSQTW 314 Query: 336 ADYTAAHIGTQTAFTLDSQVVSAPQILEAIP-GGRTQISGGEPPFSASTARQLANVLKYG 394 AD T H+ Q A TLDS V+SAP I A P G T I+G FS A LAN L+YG Sbjct: 315 ADLTREHLNDQIAITLDSAVISAPVIQGATPYGSATSINGD---FSQEEANNLANNLRYG 371 Query: 395 SLPLSF--ESSE----AQTVSATLGLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 448 +LPLSF E+ E +++ TLG + Sbjct: 372 ALPLSFAGENGEPGGTVESIPPTLGKAALEAGLWAGLAGLILVILYSLYYFRALSGVSVI 431 Query: 449 SLIASGAMVFAILVLLGRYINYXXXXXXXXXXXXXXXXXXXSFVVFFERIKDEIREGRSF 508 L+ SG + + +VLLGR+I Y SFVV++ERIKDE+ EGR+F Sbjct: 432 FLLGSGLLTYGAIVLLGRWIGYSLDLSGIAGLVIGVGATADSFVVYYERIKDELLEGRTF 491 Query: 509 RSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTILDIVVVFLVTW 568 RSA + W R+R TIV+GNAVT + + ++YFLAIG+VKGFAFTLGLTTI D+VV FLV Sbjct: 492 RSATQKAWERSRSTIVTGNAVTLIGSVIVYFLAIGEVKGFAFTLGLTTIFDLVVSFLVMA 551 Query: 569 PLVYLASKSPRLAKPAYNGLGAVQQVARERR 599 PL+ + + P AKP+ NGLG + + ERR Sbjct: 552 PLMQIIGRRPAAAKPSMNGLGGIYALIEERR 582 Score = 98.6 bits (244), Expect = 2e-18 Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 3/112 (2%) Query: 10 PARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVTLTARTPDGSAPSREALAQ 69 P R L++F ++++ +Y LVF TG+++A PKLGIDLQGGTRVTL P G P+++ L Q Sbjct: 9 PKRALALFGLIVVVIYALVFFTGNRQATPKLGIDLQGGTRVTL---APQGEDPTQDQLRQ 65 Query: 70 AQQIISARXXXXXXXXXXXXXXXXXLVITVPGNDGNEARNLGQTARLYIRPV 121 A+ I+ R LVITVPG D ++A+ +GQT++LY RPV Sbjct: 66 ARNILEQRVNGMGVSGSEVVINGNTLVITVPGEDASQAQAVGQTSQLYFRPV 117 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.133 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,128,870,156 Number of extensions: 105689316 Number of successful extensions: 282593 Number of sequences better than 10.0: 1699 Number of HSP's gapped: 282263 Number of HSP's successfully gapped: 2604 Length of query: 615 Length of database: 3,846,993,858 Length adjustment: 144 Effective length of query: 471 Effective length of database: 2,223,364,626 Effective search space: 1047204738846 Effective search space used: 1047204738846 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 84 (37.0 bits)