BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2129 (479 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HN81|B2HN81_MYCMM Tax_Id=216594 SubName: Full=Site-specific... 840 0.0 tr|Q1B0B2|Q1B0B2_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[... 704 0.0 tr|A1UQP1|A1UQP1_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[... 704 0.0 tr|A0QJ74|A0QJ74_MYCA1 Tax_Id=243243 SubName: Full=Integrase/rec... 695 0.0 tr|C1RJ21|C1RJ21_9CELL Tax_Id=446466 SubName: Full=Site-specific... 369 e-100 tr|C1RFS5|C1RFS5_9CELL Tax_Id=446466 SubName: Full=Site-specific... 369 e-100 tr|Q0RLZ3|Q0RLZ3_FRAAA Tax_Id=326424 SubName: Full=Putative unch... 218 1e-54 tr|C4E444|C4E444_STRRS Tax_Id=479432 SubName: Full=Site-specific... 213 4e-53 tr|Q82C06|Q82C06_STRAW Tax_Id=33903 (int13)SubName: Full=Putativ... 211 1e-52 tr|Q0RTY7|Q0RTY7_FRAAA Tax_Id=326424 SubName: Full=Putative inte... 209 6e-52 tr|C0ZW65|C0ZW65_RHOE4 Tax_Id=234621 SubName: Full=Putative reco... 205 1e-50 tr|B2GLH7|B2GLH7_KOCRD Tax_Id=378753 SubName: Full=Putative reco... 192 8e-47 tr|A4AK52|A4AK52_9ACTN Tax_Id=312284 SubName: Full=Integrase, pu... 188 1e-45 tr|Q1B659|Q1B659_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[... 184 2e-44 tr|A1UIX7|A1UIX7_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[... 184 3e-44 tr|C0ZWM3|C0ZWM3_RHOE4 Tax_Id=234621 SubName: Full=Putative reco... 183 5e-44 tr|C0U767|C0U767_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 183 5e-44 tr|C0ZY06|C0ZY06_RHOE4 Tax_Id=234621 SubName: Full=Putative inte... 182 8e-44 tr|Q1B4B3|Q1B4B3_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[... 177 3e-42 tr|A1T531|A1T531_MYCVP Tax_Id=350058 SubName: Full=Recombinase;[... 177 3e-42 tr|A1SFM2|A1SFM2_NOCSJ Tax_Id=196162 SubName: Full=Recombinase;[... 175 1e-41 tr|C0U5N9|C0U5N9_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 167 2e-39 tr|Q82EZ5|Q82EZ5_STRAW Tax_Id=33903 (int11)SubName: Full=Putativ... 167 4e-39 tr|Q7VEX0|Q7VEX0_MYCBO Tax_Id=1765 SubName: Full=Probable phiRv1... 164 2e-38 tr|O06604|O06604_MYCTU Tax_Id=1773 SubName: Full=Probable phiRv1... 164 2e-38 tr|A5U2U2|A5U2U2_MYCTA Tax_Id=419947 SubName: Full=Putative inte... 164 2e-38 tr|Q7D5I2|Q7D5I2_MYCTU Tax_Id=1773 SubName: Full=Integrase, puta... 164 2e-38 tr|A4KLZ0|A4KLZ0_MYCTU Tax_Id=395095 SubName: Full=Integrase;[My... 164 2e-38 tr|C5BWV1|C5BWV1_BEUC1 Tax_Id=471853 SubName: Full=Resolvase dom... 164 2e-38 tr|A8LEZ5|A8LEZ5_FRASN Tax_Id=298653 SubName: Full=Recombinase;[... 164 2e-38 tr|C2AJU8|C2AJU8_TSUPA Tax_Id=521096 SubName: Full=Site-specific... 163 5e-38 tr|Q2JAF2|Q2JAF2_FRASC Tax_Id=106370 SubName: Full=Recombinase;[... 155 1e-35 tr|A5CTD1|A5CTD1_CLAM3 Tax_Id=443906 (intA)SubName: Full=Putativ... 154 3e-35 tr|C9YWJ6|C9YWJ6_STRSW Tax_Id=680198 SubName: Full=Putative tran... 152 7e-35 tr|Q1B5B2|Q1B5B2_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[... 151 2e-34 tr|A1UJS5|A1UJS5_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[... 151 2e-34 tr|D0WPX8|D0WPX8_9ACTO Tax_Id=649743 SubName: Full=Putative inte... 137 3e-30 tr|C6RBF1|C6RBF1_9CORY Tax_Id=553206 SubName: Full=Recombinase;[... 132 1e-28 tr|Q37839|Q37839_9CAUD Tax_Id=10732 (ORF469)SubName: Full=ORF469... 129 1e-27 tr|Q2J5H0|Q2J5H0_FRASC Tax_Id=106370 SubName: Full=Recombinase;[... 125 2e-26 tr|C2CSY0|C2CSY0_CORST Tax_Id=525268 SubName: Full=Recombinase;[... 125 2e-26 tr|C7NF29|C7NF29_KYTSD Tax_Id=478801 SubName: Full=Site-specific... 121 2e-25 tr|C8NVR4|C8NVR4_9CORY Tax_Id=585529 SubName: Full=Integrase;[Co... 120 3e-25 tr|C0W804|C0W804_9ACTO Tax_Id=525246 SubName: Full=Possible DNA ... 116 6e-24 tr|Q2J9Z8|Q2J9Z8_FRASC Tax_Id=106370 SubName: Full=Recombinase;[... 113 6e-23 tr|Q0RLN1|Q0RLN1_FRAAA Tax_Id=326424 SubName: Full=Putative unch... 113 6e-23 tr|C7N813|C7N813_SLAHD Tax_Id=471855 SubName: Full=Site-specific... 113 6e-23 tr|Q2JG12|Q2JG12_FRASC Tax_Id=106370 SubName: Full=Recombinase;[... 107 3e-21 tr|Q9ZBZ3|Q9ZBZ3_STRCO Tax_Id=1902 SubName: Full=Putative integr... 107 4e-21 tr|C9S0X0|C9S0X0_GEOSY Tax_Id=544556 SubName: Full=Resolvase dom... 105 2e-20 >tr|B2HN81|B2HN81_MYCMM Tax_Id=216594 SubName: Full=Site-specific integrase;[Mycobacterium marinum] Length = 479 Score = 840 bits (2170), Expect = 0.0 Identities = 437/479 (91%), Positives = 437/479 (91%) Query: 1 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV 60 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV Sbjct: 1 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV 60 Query: 61 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT 120 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT Sbjct: 61 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT 120 Query: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT 180 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT Sbjct: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT 180 Query: 181 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR 240 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR Sbjct: 181 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR 240 Query: 241 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQ 300 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTY YSQ Sbjct: 241 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTYLLSGLLRCRRCGNRLYSQ 300 Query: 301 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXX 360 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDS Sbjct: 301 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSAQLADALAGKAN 360 Query: 361 XXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT 420 QGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT Sbjct: 361 ADADVTALAAQVDTDQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT 420 Query: 421 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV Sbjct: 421 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 >tr|Q1B0B2|Q1B0B2_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 479 Score = 704 bits (1817), Expect = 0.0 Identities = 364/479 (75%), Positives = 389/479 (81%) Query: 1 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV 60 M K+ GQRVGVGSAAIYARIS+DVEGTGLGVARQ++DCRKLA DRGW VG EYVDNDV Sbjct: 1 MAKAKTPGQRVGVGSAAIYARISADVEGTGLGVARQVQDCRKLAADRGWQVGDEYVDNDV 60 Query: 61 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT 120 SA+SGKPRREYARML DL SG RDAVIVYNLDRLHRRPVELEEFV LCESVGVRDVATVT Sbjct: 61 SAYSGKPRREYARMLDDLKSGARDAVIVYNLDRLHRRPVELEEFVALCESVGVRDVATVT 120 Query: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT 180 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNA+ GLPHGSARPFGYE DKIT Sbjct: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAEQGLPHGSARPFGYEPDKIT 180 Query: 181 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR 240 V EA V+REMV RYLAG S+RSLTIWLN++ + P+VAKSWQT+AVRQ+L+SGRIAGLR Sbjct: 181 VCSKEAKVIREMVARYLAGASIRSLTIWLNDAGLAPAVAKSWQTTAVRQILASGRIAGLR 240 Query: 241 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQ 300 EH GEVIGPA WPAIIT AERDR+LARM ARSVTK+R RTY +SQ Sbjct: 241 EHHGEVIGPAAWPAIITHAERDRILARMTARSVTKTRAPRTYLLSGLLRCGRCGNRLFSQ 300 Query: 301 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXX 360 ARH+NPQNRVRRYVCLKGPDHGGCGRLTVVA PVEELLT+AVLTRLDS Sbjct: 301 ARHNNPQNRVRRYVCLKGPDHGGCGRLTVVALPVEELLTDAVLTRLDSPHLANVLAGKAS 360 Query: 361 XXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT 420 RLDELA LYA GA+TAREWIAARDPIT+RITA RRDIAA TDT Sbjct: 361 VDADVAALSAQLEADTTRLDELAALYAQGAVTAREWIAARDPITDRITATRRDIAAATDT 420 Query: 421 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 T V EL GTG LR +WD LD+ RQQ IIKAVLDHAVIA GTPGAR LDI+RV P W V Sbjct: 421 TNVTELAGTGHLLRGQWDDLDIDRQQTIIKAVLDHAVIAAGTPGARSLDINRVRPHWGV 479 >tr|A1UQP1|A1UQP1_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 479 Score = 704 bits (1817), Expect = 0.0 Identities = 364/479 (75%), Positives = 389/479 (81%) Query: 1 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV 60 M K+ GQRVGVGSAAIYARIS+DVEGTGLGVARQ++DCRKLA DRGW VG EYVDNDV Sbjct: 1 MAKAKTPGQRVGVGSAAIYARISADVEGTGLGVARQVQDCRKLAADRGWQVGDEYVDNDV 60 Query: 61 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT 120 SA+SGKPRREYARML DL SG RDAVIVYNLDRLHRRPVELEEFV LCESVGVRDVATVT Sbjct: 61 SAYSGKPRREYARMLDDLKSGARDAVIVYNLDRLHRRPVELEEFVALCESVGVRDVATVT 120 Query: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT 180 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNA+ GLPHGSARPFGYE DKIT Sbjct: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAEQGLPHGSARPFGYEPDKIT 180 Query: 181 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR 240 V EA V+REMV RYLAG S+RSLTIWLN++ + P+VAKSWQT+AVRQ+L+SGRIAGLR Sbjct: 181 VCSKEAKVIREMVARYLAGASIRSLTIWLNDAGLAPAVAKSWQTTAVRQILASGRIAGLR 240 Query: 241 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQ 300 EH GEVIGPA WPAIIT AERDR+LARM ARSVTK+R RTY +SQ Sbjct: 241 EHHGEVIGPAAWPAIITHAERDRILARMTARSVTKTRAPRTYLLSGLLRCGRCGNRLFSQ 300 Query: 301 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXX 360 ARH+NPQNRVRRYVCLKGPDHGGCGRLTVVA PVEELLT+AVLTRLDS Sbjct: 301 ARHNNPQNRVRRYVCLKGPDHGGCGRLTVVALPVEELLTDAVLTRLDSPHLANVLAGKAS 360 Query: 361 XXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT 420 RLDELA LYA GA+TAREWIAARDPIT+RITA RRDIAA TDT Sbjct: 361 VDADVAALSAQLEADTTRLDELAALYAQGAVTAREWIAARDPITDRITATRRDIAAATDT 420 Query: 421 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 T V EL GTG LR +WD LD+ RQQ IIKAVLDHAVIA GTPGAR LDI+RV P W V Sbjct: 421 TNVTELAGTGHLLRGQWDDLDIDRQQTIIKAVLDHAVIAAGTPGARSLDINRVRPHWGV 479 >tr|A0QJ74|A0QJ74_MYCA1 Tax_Id=243243 SubName: Full=Integrase/recombinase;[Mycobacterium avium] Length = 479 Score = 695 bits (1793), Expect = 0.0 Identities = 352/479 (73%), Positives = 388/479 (81%) Query: 1 MPARKSAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDV 60 M K+ QRVG SAAIYARIS+DVEGTGLGVARQLEDCRKLA +RGWP+G EYVDNDV Sbjct: 1 MGKAKTPAQRVGARSAAIYARISADVEGTGLGVARQLEDCRKLAAERGWPIGDEYVDNDV 60 Query: 61 SAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVT 120 SA+SGKPRREYARML DL SG RDAVIVYNLDRLHRRPVELE+FVTLCESVGVRDVATVT Sbjct: 61 SAYSGKPRREYARMLDDLKSGARDAVIVYNLDRLHRRPVELEDFVTLCESVGVRDVATVT 120 Query: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKIT 180 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNA+ GLPHG ARPFGYE DKIT Sbjct: 121 ADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAEKGLPHGPARPFGYEPDKIT 180 Query: 181 VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLR 240 +R EA +VREMVDRYLAG S+RSLTIWL+++ + P +KSWQT+ VR +L+SGRIAGLR Sbjct: 181 LRPEEAKIVREMVDRYLAGASIRSLTIWLSDTGVAPPASKSWQTTTVRNILASGRIAGLR 240 Query: 241 EHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQ 300 EH GEVIG A WPAIIT ERDR+LARM ARSVTK+R RTY +SQ Sbjct: 241 EHHGEVIGAAAWPAIITAGERDRILARMTARSVTKTRAPRTYLLSGMLRCGRCGNRLFSQ 300 Query: 301 ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXX 360 ARH+NP NRVRRYVCLKGPDHGGCGRLTVVA PVEELLT+AVLTRLDS Sbjct: 301 ARHNNPTNRVRRYVCLKGPDHGGCGRLTVVALPVEELLTDAVLTRLDSPQLAGALAGRSS 360 Query: 361 XXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDT 420 Q RLDELAGLYA+GA++AREWIAARDPIT+RI ARRDIA TDT Sbjct: 361 VDADVAALAAQLEADQARLDELAGLYAEGAVSAREWIAARDPITDRIARARRDIAKATDT 420 Query: 421 TAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 +AV +LVG G LR +WD LD+ RQQAIIK+VLDHAVIAPGTPG+R+LDI+RV P WR+ Sbjct: 421 SAVMDLVGCGEVLRGQWDDLDIDRQQAIIKSVLDHAVIAPGTPGSRKLDINRVQPHWRI 479 >tr|C1RJ21|C1RJ21_9CELL Tax_Id=446466 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Cellulomonas flavigena DSM 20109] Length = 467 Score = 369 bits (948), Expect = e-100 Identities = 207/466 (44%), Positives = 269/466 (57%), Gaps = 7/466 (1%) Query: 15 SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARM 74 + A+YARIS D G GV RQL+DCR AE RGW V EYVD+DVSA+SGK R Y RM Sbjct: 6 AVALYARISQDRSGDEAGVTRQLKDCRAEAERRGWTVAEEYVDDDVSAYSGKRRPAYERM 65 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 L D+ G RDAV+V+++DRLHRRP+ELE+FV +C+ GVRD+ T++ ++DL N DGL +A Sbjct: 66 LRDITEGRRDAVVVWHMDRLHRRPIELEQFVAVCDKAGVRDLVTLSGEVDLTNGDGLLLA 125 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLP-HGSARPFGYEADKITVRESEAAVVREMV 193 R +A AA ES K R++RK L+ A+ G P G RPFG+ D+IT SEAA VRE+ Sbjct: 126 RFMSAVAAHESSTKPRRLKRKALEIAETGRPTMGGRRPFGFAEDRITHESSEAAAVREVA 185 Query: 194 DRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWP 253 R LAG+SL S+T W+ ES + W+T +VRQV+++ R+ G+R H+ +VIG W Sbjct: 186 ARLLAGESLTSVTTWMQESGVPTVSGAPWRTHSVRQVVTNPRMWGMRVHQDQVIGEGTWE 245 Query: 254 AIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRY 313 I+TP + +R+ + + +RTAR Y S P+ VRRY Sbjct: 246 PILTPEQGERLQRLLLDPARRTNRTARRYLLSGMLTCGKCGARMVSA-----PREGVRRY 300 Query: 314 VCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXX 373 C GPD GCG + VVA P+E L+ EAVL RLDS Sbjct: 301 ACRTGPDQRGCGGIYVVADPLERLVAEAVLQRLDSPQMHDALTGNEHDDAEVAALAAKVQ 360 Query: 374 XXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGAL 433 + RL +LA ++A G I AR+ IT R+ A RR +AA V E G G L Sbjct: 361 DDERRLLDLADMFASGEIERVGMKRAREQITPRLEANRRALAAANGRDQVVEYAGRGAEL 420 Query: 434 RTEWDGLDLGRQQAIIKAVLDHAVIAPGTP-GARRLDIDRVAPIWR 478 R WDGLDL RQ A++KAVL A + P T G R D RV P WR Sbjct: 421 REAWDGLDLSRQVAVVKAVLAGATVLPATQRGRRGFDPGRVVPDWR 466 >tr|C1RFS5|C1RFS5_9CELL Tax_Id=446466 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Cellulomonas flavigena DSM 20109] Length = 467 Score = 369 bits (948), Expect = e-100 Identities = 206/467 (44%), Positives = 272/467 (58%), Gaps = 7/467 (1%) Query: 15 SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARM 74 + A+YARIS D G LGV RQL DCR A RGW V EY+D+D SA+SGK R Y RM Sbjct: 6 AVAVYARISQDRSGEELGVRRQLADCRAEAARRGWTVAEEYIDDDSSAYSGKVRPSYDRM 65 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 LADLA G RDAV+V+++DRLHRRP+E E FV +C GV+DV T++ D+DL DGL +A Sbjct: 66 LADLAEGRRDAVVVWHMDRLHRRPIEFERFVEVCTRAGVQDVVTLSGDVDLAKGDGLLVA 125 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLP-HGSARPFGYEADKITVRESEAAVVREMV 193 R+ AAFAA ES K R RRK L+ A++G P G RPFG+ D++T +EA VVRE+ Sbjct: 126 RVVAAFAASESDAKRRRGRRKALEIAESGRPMMGGPRPFGFLDDRVTHHPAEAPVVRELA 185 Query: 194 DRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWP 253 R LAG++L SL+ WL +S + W+T+ VRQ+L++ R G+R H+G+VIG A W Sbjct: 186 ARALAGETLISLSTWLQDSGVRTVGGNEWRTTTVRQLLTNPRAWGMRVHQGQVIGKATWE 245 Query: 254 AIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRY 313 IITP + +R+ + + +R+AR Y S P++ RRY Sbjct: 246 PIITPEDGERLRRLLLDPARRTNRSARRYLLTGMLRCGKC-----GSPLRSAPKDGKRRY 300 Query: 314 VCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXX 373 C GPDH GCG + + A +E +TEAVL RLDS Sbjct: 301 GCAMGPDHRGCGGVFIYAEMLERFVTEAVLYRLDSPVMDEVLTGDGDNDERARALGEAIK 360 Query: 374 XXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGAL 433 +LD+LA ++ADG ++ EW+ AR I R+ A+R + VT AV +G G L Sbjct: 361 ADTDQLDDLATMWADGEVSKAEWLKARGRIESRLEASRAEFYRVTHRDAVAPYLGRGDEL 420 Query: 434 RTEWDGLDLGRQQAIIKAVLDHAVIAP-GTPGARRLDIDRVAPIWRV 479 R +WDGL RQ AI+KAVL A I P PG LD +RV P WR+ Sbjct: 421 RAQWDGLAFSRQVAIVKAVLAQATILPAAVPGRHGLDPERVEPEWRL 467 >tr|Q0RLZ3|Q0RLZ3_FRAAA Tax_Id=326424 SubName: Full=Putative uncharacterized protein;[Frankia alni] Length = 478 Score = 218 bits (556), Expect = 1e-54 Identities = 119/253 (47%), Positives = 156/253 (61%), Gaps = 1/253 (0%) Query: 6 SAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG 65 SAG +G+ Y RIS D EG GLGVARQ D +A+ G P DNDVSA+S Sbjct: 9 SAGSNIGLLRPVGYVRISLDREGAGLGVARQTADLNDVADRLGMPRPEVVTDNDVSAYSR 68 Query: 66 KPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDL 125 K R Y +L+ +ASG + ++++++DRL R P ELEE V L G+R +DL Sbjct: 69 KRRPGYEEVLSGIASGRWNVLLIWHVDRLTRNPKELEEIVDLANQTGLRIETVKGGRVDL 128 Query: 126 GNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGS-ARPFGYEADKITVRES 184 +G ARI A ES +S RIRRKMLQNA+AGLPHG RPFGYE D +TVR Sbjct: 129 STGEGRLHARILGGLARYESEHRSDRIRRKMLQNAEAGLPHGGMRRPFGYEPDGMTVRPD 188 Query: 185 EAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRG 244 EA V+R + +AG++LR+L LN++Q+ S W + +R+VL GRIAGLR H+G Sbjct: 189 EAEVIRWAMGGVIAGRTLRALVGELNDAQVATSTGVPWSVTVLRKVLIGGRIAGLRVHQG 248 Query: 245 EVIGPAVWPAIIT 257 V+GPA WPAI++ Sbjct: 249 RVLGPAAWPAIVS 261 >tr|C4E444|C4E444_STRRS Tax_Id=479432 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Streptosporangium roseum DSM 43021] Length = 488 Score = 213 bits (542), Expect = 4e-53 Identities = 115/241 (47%), Positives = 148/241 (61%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A +Y RIS D EG GLG+ RQ EDC LAE G+ V A Y DND+SA+SGK R Y ++L Sbjct: 10 AIVYVRISRDKEGAGLGIDRQREDCEALAERLGFRVIAVYDDNDISAYSGKARPGYRQLL 69 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 ADL +G AV+ ++ DRLHR PVELEE++T+CE G+ IDL G +AR Sbjct: 70 ADLEAGRATAVLAWHTDRLHRSPVELEEYITVCEPRGIVTHTVKAGPIDLATPSGRMIAR 129 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 A A ES KS R RRK Q AQAG G RPFGYE + +TVR EAA V++ + Sbjct: 130 QLGAVARFESEHKSDRARRKRDQMAQAGQWKGGRRPFGYEDNGVTVRPDEAAEVKQASES 189 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAI 255 L+G S+ ++ N + + +W T +VR VL+ R AG+ EHRGE +GPA WPAI Sbjct: 190 LLSGMSMHAIVRDWNARGVKTTTGATWSTRSVRNVLTRPRNAGIMEHRGEELGPAEWPAI 249 Query: 256 I 256 + Sbjct: 250 V 250 >tr|Q82C06|Q82C06_STRAW Tax_Id=33903 (int13)SubName: Full=Putative serine-family recombinase/integrase;[Streptomyces avermitilis] Length = 500 Score = 211 bits (538), Expect = 1e-52 Identities = 161/501 (32%), Positives = 228/501 (45%), Gaps = 44/501 (8%) Query: 13 VGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG-KPRREY 71 V IY RIS D EG GLGV RQ +DCR LA GW V Y+DNDV+A K R++Y Sbjct: 9 VRRVGIYVRISDDREGGGLGVKRQEDDCRLLAASLGWRVIEVYIDNDVTAADRRKKRKDY 68 Query: 72 ARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTA-DIDLGNDDG 130 RMLAD+ G DA++ ++ DR++R+PVELE + + E ++ATV A D+DL G Sbjct: 69 LRMLADIEMGCIDAIVSWHPDRVYRQPVELEHLINIVEDHKT-EIATVKAGDLDLSTPTG 127 Query: 131 LFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSA-RPFGY--------EADKIT- 180 +AR+ A A E K RI RK+ + +AG H S RPFGY KI Sbjct: 128 RLVARMLGAIAKYEVEHKQERILRKIQELVEAGKIHNSGHRPFGYTRLFDGEGSRRKILG 187 Query: 181 --VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAG 238 + E EAA +++ R L G+ L +L NE+ I S +W A+R +L SGRI+G Sbjct: 188 EILNEEEAAHIKKWARRVLEGEKLGTLVAEANEAGIKTSTGGAWSYQAMRFLLMSGRISG 247 Query: 239 LREHRGEVIGPAVWPAIITPAERDRVLARMAARS---------------------VTKSR 277 +EHRGE+ G AVWP II P + D + A +A RS + K Sbjct: 248 RKEHRGEIYGQAVWPKIIEPEDSDMIRALLAERSEEFKAEYGERDTPALKYPLSGLVKCT 307 Query: 278 TARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEEL 337 ++ + + + Y C K D GGCG T+ +E L Sbjct: 308 CKVSHVAGEPCSCKEEGKKHHRMSTGQRGDKDMPIYTCKK--DGGGCGGRTIQIPDLEPL 365 Query: 338 LTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWI 397 L + + RL+ + R EL DG ARE Sbjct: 366 LEKLLFKRLEE----VEAAAEADDNDPRPALEAKLARWERRKKELGDELLDGDRPAREIR 421 Query: 398 AARDPITERITAARRDIAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAV 457 A D + R+ AR++IA + E+ + LR W + R+Q+ + ++ + Sbjct: 422 DAIDTLNGRMAGARKEIAQYGVKANLSEV--SAAELRKAWKDYSVARKQSTYRGLIREIL 479 Query: 458 IAPGTPGARRLDIDRVAPIWR 478 I P T + DRV W+ Sbjct: 480 IHPATRPFNVWNPDRVEVFWK 500 >tr|Q0RTY7|Q0RTY7_FRAAA Tax_Id=326424 SubName: Full=Putative integrase/recombinase;[Frankia alni] Length = 478 Score = 209 bits (532), Expect = 6e-52 Identities = 114/242 (47%), Positives = 148/242 (61%), Gaps = 1/242 (0%) Query: 19 YARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARMLADL 78 Y RIS D EG GLGVARQ D +A+ G P DNDVSA+S K R Y +LA + Sbjct: 22 YVRISLDREGAGLGVARQTADLNDVADRLGLPRPEVVTDNDVSAYSKKRRPGYEEVLAGI 81 Query: 79 ASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMARIFA 138 ASG + ++V+++DRL R P ELEE V L G+R +DL +G ARI Sbjct: 82 ASGRWNVLLVWHVDRLTRSPKELEEIVDLANRTGLRIETVKGGRVDLSTGEGRLHARILG 141 Query: 139 AFAAKESGRKSARIRRKMLQNAQAGLPHGS-ARPFGYEADKITVRESEAAVVREMVDRYL 197 A ES +S R+RRKMLQNA+AGLPHG RPFGYE D +TVR +EA V+R V + Sbjct: 142 GLARYESEHRSDRVRRKMLQNAEAGLPHGGMRRPFGYEPDGMTVRPAEAEVIRWAVGGVI 201 Query: 198 AGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAIIT 257 AG+ LR+L LN++ + S W +S +R +L GR+AG R H+G ++GPA WPAI+ Sbjct: 202 AGRPLRALVAELNDAGVATSQGARWSSSTLRGILVHGRVAGFRVHQGRILGPAAWPAIVD 261 Query: 258 PA 259 A Sbjct: 262 VA 263 >tr|C0ZW65|C0ZW65_RHOE4 Tax_Id=234621 SubName: Full=Putative recombinase;[Rhodococcus erythropolis] Length = 451 Score = 205 bits (521), Expect = 1e-50 Identities = 151/471 (32%), Positives = 216/471 (45%), Gaps = 29/471 (6%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AAIY RIS D G GLGV RQL DC KLAE W V Y DNDVSAFSGK R Y +L Sbjct: 3 AAIYTRISVDQTGEGLGVERQLSDCDKLAESLNWTVVQRYSDNDVSAFSGKLRPGYETLL 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 + +G+ DA+I ++ DRLHR P+ELE F+ + + GV +DL G +AR Sbjct: 63 TAMQAGEVDALIAWHSDRLHRSPIELERFIEIADEAGVEIRTVHGGTLDLSTSAGRMVAR 122 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I + A +ES S R +R Q A +G S RPFGY + E EA ++ V Sbjct: 123 ILGSVARQESEHSSERRKRANDQKAASGAWQASRRPFGYTLAGEPL-EPEAGAIKAAVAD 181 Query: 196 YLAGQSLRSLT-IWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPA 254 LAG+S+R + W + T W ++VR+VL + R A LR HRG V+G +W Sbjct: 182 VLAGKSIRQVAREWNKQGLRTTHGGTLWSATSVRRVLKNPRYAALRVHRGVVVGEGIWEP 241 Query: 255 IITPAERDRVLARMA----ARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR--HSNPQN 308 +I P +LA ++ A+ V+ R + S+ + + PQN Sbjct: 242 LIEPDAHYGLLAYVSDPARAQKVSFERKWQGSGVYACGVCGSKLIVHVSEKKRAYKCPQN 301 Query: 309 RVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXX 368 VRR G V A + L V ++S Sbjct: 302 HVRR--------QGEALDAFVDAVTLARLSESDVRLSVES------------PGVDVSTL 341 Query: 369 XXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVG 428 QGRLD+LA ++A+GAI A + + + E++ ++ A + + +LV Sbjct: 342 QIGRDTLQGRLDQLAAMFAEGAIDASQLRRGSEDLREQLAQVDAELGAARQGSPLVDLVL 401 Query: 429 TGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 G AL W L + +++A++ VI G RR D + + W V Sbjct: 402 AGEALGERWAELSADMRGKVVEALMSVTVIR-SPKGLRRFDPEYINIEWNV 451 >tr|B2GLH7|B2GLH7_KOCRD Tax_Id=378753 SubName: Full=Putative recombinase;[Kocuria rhizophila] Length = 461 Score = 192 bits (488), Expect = 8e-47 Identities = 148/475 (31%), Positives = 215/475 (45%), Gaps = 29/475 (6%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A IYARIS D EGT LGV RQLEDCR+ A RGW V EYV+ND SA K R +Y +ML Sbjct: 3 AVIYARISRDAEGTSLGVNRQLEDCRQAASARGWTVVHEYVENDTSATRAKVRPQYQQML 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 DLA+G A+IV+++DRL R P ELE+ + L ++ + + ++ +IDL G AR Sbjct: 63 RDLANGIAGALIVWDVDRLTRTPRELEDVIDLADAHSIA-LVSIGGEIDLATPQGRMTAR 121 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYE----------ADKITVRESE 185 I + A E+ + + RIRRK + A+ GLP+G PFG+ + E Sbjct: 122 IKGSVARHETDQMARRIRRKQRERAEQGLPNGLC-PFGWRRVYDDQGRRAGSRDVAYAPE 180 Query: 186 AAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGE 245 A +R+ V R LAG+S+RS+ + N + W+T VRQ L AGLREH+GE Sbjct: 181 AEQIRDGVSRLLAGESVRSIAMRWNTEGLPTQRGNGWRTGTVRQTLRRAANAGLREHKGE 240 Query: 246 VIGPAVWPAIITPAERDRVLARMA--ARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARH 303 + V +IT E RV A +A R V T Y + R Sbjct: 241 IFPSDVIEPLITEDELHRVRALLADPGRRVQHGTTPAYLLTGIAECGRCGGKMRYLKPR- 299 Query: 304 SNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXX 363 ++ + Y C C R+ V+ ++ A+L RL Sbjct: 300 --GRHNIPSYGC------RDCTRVARSMGLVDAVVEGAILGRLQ--RPDVLETLPTMDPK 349 Query: 364 XXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAV 423 + +L E A L+ G IT + + ++ R +A +T +A Sbjct: 350 RGDDLRSQAEALEAKLSEAADLFTAGTITGEQLSRITAGVRPQLERTRAQLADLTPASAA 409 Query: 424 FELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWR 478 + G R W+ L ++ I+ ++ I P PG R D + V W+ Sbjct: 410 AAIAGDDAVAR--WEDATLLVKREIVDTLMT-VTILPAGPGRGR-DPESVKIEWK 460 >tr|A4AK52|A4AK52_9ACTN Tax_Id=312284 SubName: Full=Integrase, putative;[marine actinobacterium PHSC20C1] Length = 480 Score = 188 bits (478), Expect = 1e-45 Identities = 149/486 (30%), Positives = 213/486 (43%), Gaps = 37/486 (7%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A IY RIS D G LGV RQ DC E +GW + YVDND+SA SG R EY RML Sbjct: 3 AGIYCRISLDSAGDELGVERQKADCSAETERQGWTIAGYYVDNDISASSGVRRPEYQRML 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 D ASG DA++VY++ RL R P ELE+ + L E V +A V+ ++L DG MAR Sbjct: 63 KDAASGAIDAIVVYDISRLTRTPRELEDIIILAERHNV-GLANVSGSVNLSTPDGRLMAR 121 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY--------------EADKITV 181 FA E + S R+ RK L+ AQ G PHG A P+G+ A + Sbjct: 122 TMGTFARYEVEQLSKRLTRKFLEKAQRGEPHGYA-PYGFMRIDPVDEKGVPTGAARRDLA 180 Query: 182 RESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLRE 241 A +VRE R LA +SLRS+T N I A W ++ +RQ+L AGLR Sbjct: 181 HPEHAVIVREAARRVLALESLRSITADFNTRGIPGPKAGKWNSTILRQILLRSTNAGLRS 240 Query: 242 HRGEVIGPAVWPAIITPAERDRVLA--RMAARSVTKSRTARTYXXXXXXXXXXXXXXXYS 299 ++G+VIGP+ + R++A R R + +A Y Sbjct: 241 YQGKVIGPSTSEPLYDEDIHARLVALLRDPTRRSNSAGSAPQYLLSGIALCGLCGGAMRR 300 Query: 300 Q-------ARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXX 352 Q R +N+ Y C C ++ + V++++T AV+ RL Sbjct: 301 QIGRIVTSKRTGRTKNQPSSYGC------SACFKVRRIQDHVDQVVTSAVVARLSQ--PD 352 Query: 353 XXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARR 412 + E A ++A+ I A + + +AA R Sbjct: 353 ARQIFAVGDSAAAAAAHSRIETANAKAAEAASMFANDEIDAGQLRRVTADLRAVRSAAER 412 Query: 413 DIAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDR 472 D+ +A+ +LV G + T WD L + Q+ I+ ++ ++ G G D Sbjct: 413 DLETARPRSALTDLV--VGDVATGWDALQISSQRDIVNTLMVITILPTG--GGLAFDPQS 468 Query: 473 VAPIWR 478 VA WR Sbjct: 469 VAIEWR 474 >tr|Q1B659|Q1B659_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 460 Score = 184 bits (467), Expect = 2e-44 Identities = 113/269 (42%), Positives = 152/269 (56%), Gaps = 5/269 (1%) Query: 18 IYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG-KPRREYARMLA 76 IY RIS+D G LGV RQ D RKL +RGW V + DND SA+ K R Y ML Sbjct: 7 IYCRISADASGDALGVQRQEADARKLCAERGWTVVEVFCDNDRSAYDRLKQRPRYLAMLD 66 Query: 77 DLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADI-DLGNDDGLFMAR 135 + +G+ + ++ ++ DRLHR+ EL F+ L GV V TVTA DL G AR Sbjct: 67 AIRAGEINGIVAWHPDRLHRQTRELVPFIDLVNEFGVT-VETVTAGAYDLTTPSGRMNAR 125 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I + A ES KS RIRRK+ NA G HG +RP+G+ D++++ +EAAVVRE R Sbjct: 126 IVGSVAEFESEHKSERIRRKLEANAAEGRHHGGSRPYGWLDDRVSIHPTEAAVVREAAAR 185 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAI 255 LAG+S++S+ LN + T S + W+ VR +L R AGLR H GEV+G W AI Sbjct: 186 VLAGESVKSIARALNAAGHTTSTGRPWRDVNVRDMLVRPRNAGLRVHHGEVVGGGRWEAI 245 Query: 256 ITPAERDRVLARMA--ARSVTKSRTARTY 282 + + +V+A + AR T R R + Sbjct: 246 LPADDHHQVVAILTDPARRTTPGRDGRIH 274 >tr|A1UIX7|A1UIX7_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 460 Score = 184 bits (466), Expect = 3e-44 Identities = 113/269 (42%), Positives = 151/269 (56%), Gaps = 5/269 (1%) Query: 18 IYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG-KPRREYARMLA 76 IY RIS+D G LGV RQ D RKL +RGW V + DND SA+ K R Y ML Sbjct: 7 IYCRISADASGDALGVQRQEADARKLCAERGWTVVEVFCDNDRSAYDRLKQRPRYLAMLD 66 Query: 77 DLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADI-DLGNDDGLFMAR 135 + +G+ + ++ ++ DRLHR+ EL F+ L GV V TVTA DL G AR Sbjct: 67 AIRAGEINGIVAWHPDRLHRQTRELVPFIDLVNEFGVT-VETVTAGAYDLTTPSGRMNAR 125 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I + A ES KS RIRRK+ NA G HG +RP+G+ D++++ +EAAVVRE R Sbjct: 126 IVGSVAEFESEHKSERIRRKLEANAAEGRHHGGSRPYGWLDDRVSIHPTEAAVVREAAAR 185 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAI 255 LAG+S++S+ LN T S + W+ VR +L R AGLR H GEV+G W AI Sbjct: 186 VLAGESVKSIARALNAGGHTTSTGRPWRDVNVRDMLVRPRNAGLRVHHGEVVGGGRWEAI 245 Query: 256 ITPAERDRVLARMA--ARSVTKSRTARTY 282 + + +V+A + AR T R R + Sbjct: 246 LPADDHHQVVAILTDPARRTTPGRDGRIH 274 >tr|C0ZWM3|C0ZWM3_RHOE4 Tax_Id=234621 SubName: Full=Putative recombinase;[Rhodococcus erythropolis] Length = 454 Score = 183 bits (464), Expect = 5e-44 Identities = 104/255 (40%), Positives = 140/255 (54%), Gaps = 1/255 (0%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A IY RIS+D EG+GLGV RQ EDC LA+ GW V + DND+SA+SGKPR Y ML Sbjct: 3 ALIYCRISADREGSGLGVDRQREDCEALADKLGWEVVDVFTDNDLSAYSGKPRPAYKAML 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 +L G AVI ++ DRLHR PVELE F++LCE + + +IDL G AR Sbjct: 63 EELRKGRAQAVIAWHTDRLHRSPVELESFISLCEPLSIVVRTVQAGEIDLSTPSGQMNAR 122 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I A A E R+ R Q A AG + FGY D + +EA +R Sbjct: 123 IVGAVARHEIDHARKRMVRAHEQAAAAGKWRARRQVFGYTKDGTSTVPTEAQAIRLAAAD 182 Query: 196 YLAGQSLRSLT-IWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPA 254 LAG+SLR + W ++ A+ W S+VR++L++ R A L+E++G ++G WP Sbjct: 183 VLAGKSLRQVAREWNEAGHVSKGSAQKWNASSVRRILANPRYAALQEYQGRIVGNGNWPQ 242 Query: 255 IITPAERDRVLARMA 269 I+ E +LA A Sbjct: 243 ILDRDEHAALLALFA 257 Score = 48.9 bits (115), Expect = 0.001 Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 376 QGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRT 435 Q R+D+LA ++A+G I + + + + ++ ++A + + +LV G LR+ Sbjct: 352 QSRMDQLAAMFAEGDIDSSQLRRGTEDLRVKVARLDEELADARSVSPLADLVLAGDDLRS 411 Query: 436 EWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 W+ L + +I +++D V+ G RR + + ++ WRV Sbjct: 412 RWEALSADLRGQVIASLMD-VVVLRSPRGLRRFEPEYISITWRV 454 >tr|C0U767|C0U767_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Geodermatophilus obscurus DSM 43160] Length = 427 Score = 183 bits (464), Expect = 5e-44 Identities = 144/442 (32%), Positives = 199/442 (45%), Gaps = 28/442 (6%) Query: 47 RGWPVGAEYVDNDVSAFSGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVT 106 RGW + +VDNDVSAFSGK R Y R+LAD+++G D V+ ++ DRLHR P+ELEEF+ Sbjct: 3 RGWDIVRVHVDNDVSAFSGKRRPAYERLLADVSAGAVDVVLAWHPDRLHRSPLELEEFIV 62 Query: 107 LCESVGVRDVATVTA-DIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLP 165 E GV V TVTA DL G F AR A ES + R+R K+ QNA G+ Sbjct: 63 AVEKGGV-GVQTVTAGQWDLSTATGRFFARQLGGVARYESEHRGERLRAKLDQNAARGVT 121 Query: 166 HGSARPFGYEADKI-------TVRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSV 218 HG A +G+ A+ V E EA VVR + + LAG+SLRS+T LN + Sbjct: 122 HGRA-TYGWRAEYAPDKTRCDVVHEEEADVVRGIAGQLLAGESLRSITANLNARGVPSPR 180 Query: 219 AKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAIITPAERDRVLARMA--ARSVTKS 276 W VR ++ R AGLR HRG+V+G W I+ P ++V A + AR + Sbjct: 181 GGPWHKGMVRHLVLRERNAGLRVHRGQVVGQGTWEPILDPGTYEQVRAVLGDPARKTSTG 240 Query: 277 RTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEE 336 A+ + R V Y C G ++ A V+E Sbjct: 241 TAAQHLLSGIARCGVCGTPVRVAWNR------TVHSYRC------AGRSCVSRRKADVDE 288 Query: 337 LLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREW 396 L++ V+ RL + RLD A YADG I AR+ Sbjct: 289 LVSRVVVARL--ARPDAVDLFAPDTSDVRRAAAEEVQVLRARLDNAADDYADGKIDARQL 346 Query: 397 IAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHA 456 + + A AV D + L+G + T W L L R++A+++A++ Sbjct: 347 ERITARLRPAVATAEARARAVDDAPLLSGLLGVAD-VETAWSSLSLSRRRAVVEALM-AV 404 Query: 457 VIAPGTPGARRLDIDRVAPIWR 478 I P G R D V W+ Sbjct: 405 TILPTRQGVRTFDPSTVRIEWK 426 >tr|C0ZY06|C0ZY06_RHOE4 Tax_Id=234621 SubName: Full=Putative integrase;[Rhodococcus erythropolis] Length = 490 Score = 182 bits (462), Expect = 8e-44 Identities = 139/455 (30%), Positives = 201/455 (44%), Gaps = 15/455 (3%) Query: 15 SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARM 74 SAAIY RIS D G GLGV RQ DCR+LA+ G V VDND+SA+SGKPR Y + Sbjct: 13 SAAIYCRISRDKTGAGLGVERQEGDCRELAQRLGVTVSHVLVDNDLSAYSGKPRPSYLSL 72 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 L + +G VI ++ DRLHR VELEE+VT E GV +DL G +A Sbjct: 73 LELMKNGQIGMVIAWHSDRLHRSMVELEEYVTASEVGGVTTHTAKAGPLDLSTPSGRLIA 132 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVD 194 R + A E R R LQ A++G G RP+G+E + +RESEAAV+RE+ Sbjct: 133 RQLGSVARYEVEHMIERQRAAKLQAAKSGKYLGGQRPYGFEPQRTAIRESEAAVIRELAH 192 Query: 195 RYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPA 254 R+ G S SL I LN+ I K W +R +L AG+ +H+G V A A Sbjct: 193 RFTNGASYWSLAIDLNQRGILTQHGKDWNALKIRNLLIRPINAGIVDHKG-VEYVAESAA 251 Query: 255 IITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRY- 313 I+T E D + A ++ T RT + H + Q R Y Sbjct: 252 ILTKDEWDDLQAAISLSKRTSVHPGRTRKHVLQGYLFCGLCG--KKLFHKSKQQRDGSYK 309 Query: 314 ---VCLKGPDH----GGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXX 366 C K GCG+++ + P+ +LL++ ++ RL+S Sbjct: 310 TTAACGKTDSQTGRPNGCGKVSRMVEPIIDLLSDCIMARLESPELAASLATYESDTTTLR 369 Query: 367 XXXXXXXXXQGRLDELAG-LYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFE 425 +GR E+ Y G + E+ + + + A I T + E Sbjct: 370 ELHVRQRALEGRSVEITNDYYVSGLLNRDEFERMKSSVDLELRAVETSIQQQTSSRVTTE 429 Query: 426 LVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAP 460 R++W+ + Q+ ++ + V+ P Sbjct: 430 ---AAIEFRSKWENSGIHWQRDLLSTLGVEIVVHP 461 >tr|Q1B4B3|Q1B4B3_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 460 Score = 177 bits (449), Expect = 3e-42 Identities = 157/487 (32%), Positives = 215/487 (44%), Gaps = 56/487 (11%) Query: 15 SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGW-PVGAEYVDNDVSAFSGKPRREYAR 73 SAA+Y RIS+D G LGVARQ EDC L E +GW PV EYVDNDVSA SG+ R Y R Sbjct: 5 SAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPV--EYVDNDVSASSGRRRPAYER 62 Query: 74 MLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFM 133 ML D+ G AV+ ++LDRLHRRP+ELE F+ L ++ + +ATV+ D+DL G + Sbjct: 63 MLTDIRDGKIGAVVAWDLDRLHRRPIELERFMDLADAHRLA-LATVSGDVDLSTSQGKLV 121 Query: 134 ARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRE-SEAAVVREM 192 AR+ A A E K R R Q A+ G P FGY D V + + A +V++ Sbjct: 122 ARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQW-RNAFGYLPDGSRVPDPTTAPLVKQA 180 Query: 193 VDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVW 252 LAG SL + N++ K W + V Q L R AGLR H GE++G W Sbjct: 181 YAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW 240 Query: 253 PAIITPAERDRVLARMAARSVTKS-------RTARTYXXXXXXXXXXXXXXXYSQARHSN 305 P ++ D L R AA+SV + +T R + Y + Sbjct: 241 PELV-----DESLWR-AAQSVLDAPGRAPGRKTVRRH--LLTGVLGCGKCGHYLSGMQTV 292 Query: 306 PQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXX 365 + R+ Y C + C +++ A VE ++ V RL + Sbjct: 293 DRKRI-TYACKE------CRGVSIRADYVEPIVIGLVAGRL-AMGDAVNLLRAEHDDAEA 344 Query: 366 XXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFE 425 + RLDE+AG ADG I + + D I ++ AV E Sbjct: 345 EKLRTEANTLRARLDEIAGERADGLIDGKGYRVMVDRINGQL--------------AVIE 390 Query: 426 LVGTGGALRTEWDGLDLGRQQA----------IIKAVLDHAVIAPGTP---GARRLDIDR 472 +DGL LG + ++AV+D V P G D DR Sbjct: 391 RRQQDAERVRVFDGLPLGTPEVDAAVGKLSPDRLRAVIDVLVTLTAEPVGKGGNTFDPDR 450 Query: 473 VAPIWRV 479 V W+V Sbjct: 451 VKYAWKV 457 >tr|A1T531|A1T531_MYCVP Tax_Id=350058 SubName: Full=Recombinase;[Mycobacterium vanbaalenii] Length = 467 Score = 177 bits (449), Expect = 3e-42 Identities = 146/473 (30%), Positives = 207/473 (43%), Gaps = 20/473 (4%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A IY RIS D G GLGVARQLEDC+ LA+ GW V + DND+SA+SGK R + ML Sbjct: 3 AVIYTRISDDQAGRGLGVARQLEDCQALADKLGWQVVNHFDDNDISAYSGKRRPGFEAML 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 + +G DA++ ++ DRL+R +LE + L ++ V +DL G +AR Sbjct: 63 EAMKAGQFDALLCFHTDRLYRNMSDLERVIELADARRVEIRTVQGGTLDLSTSAGRMVAR 122 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I + A +ES S R +R +Q A G + RPFGY D + E EA +R + Sbjct: 123 ILGSVARQESEHSSERRKRANVQRAANGDWVAARRPFGYTMDGEPL-EPEATAIRSAITD 181 Query: 196 YLAGQSLRSLT-IWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPA 254 L+G+S+R++ W + T A W ++VR+VL R A L H+G+V+GP W Sbjct: 182 VLSGKSVRAVARDWNDAGLATTGKADKWTATSVRRVLLRPRYAALVVHQGKVVGPGSWTP 241 Query: 255 IITPAERDRVLARM--AARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRV-- 310 +I ++A + AR K R Y + NRV Sbjct: 242 LIDTDTHHGIVAYLNDPARK-GKVGFERKYQGSGVYRCGVCGTPVITHMSSGGSPNRVAR 300 Query: 311 RRYVCLKG--PDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXX 368 R Y C G G G T V V L++ L S Sbjct: 301 RAYACPNGFHVRRQGDGLDTYVDTIVIGRLSQPDAAELLS-------TLSNSEGVDIGAL 353 Query: 369 XXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTD---TTAVFE 425 Q R +ELA L+ADGAI+A + +T + RD+AA T +A+ + Sbjct: 354 HAQRTALQARQEELASLFADGAISAPQLKLGSAKLTNALETLERDLAAATQGNPASALLQ 413 Query: 426 LVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWR 478 V L W L + +I ++ I G RR D D V W+ Sbjct: 414 DVNGVAQLEGRWAELSPDLRGKVIDQLMT-VTINRSPKGLRRFDPDYVTVDWK 465 >tr|A1SFM2|A1SFM2_NOCSJ Tax_Id=196162 SubName: Full=Recombinase;[Nocardioides sp.] Length = 465 Score = 175 bits (443), Expect = 1e-41 Identities = 146/469 (31%), Positives = 211/469 (44%), Gaps = 27/469 (5%) Query: 17 AIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG-KPRREYARML 75 A+Y R+S D G L V RQ EDC ++A RGW V EYVDN +SA + K R Y R++ Sbjct: 6 ALYLRVSLDRTGDHLAVDRQREDCLEIARLRGWTVVGEYVDNSISASNAAKVRPGYERLV 65 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 +D +G DA++ ++LDRL R+P +LE+++ E G+R + T + DLG D G AR Sbjct: 66 SDFDAGAFDALVCWDLDRLTRQPRQLEDWIDAAEERGLR-LVTANGEADLGTDGGRMFAR 124 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 + AA A E RKSAR R + Q A+ G R GY D TV E EA+VVREM +R Sbjct: 125 VKAAVARSEVERKSARQTRALRQRAERGRLPAGVRLTGYATDG-TVDEVEASVVREMFER 183 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVI------GP 249 +L G SL+++ L I + W S+VR VL + R AGL ++G + P Sbjct: 184 FLVGDSLKAIAADLERRGIVTRSGRPWNPSSVRTVLLNPRYAGLSVYKGAPVVKDGERVP 243 Query: 250 AVWPAIITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNR 309 W I+T A D V AR+ A KS T+ H++ Sbjct: 244 GAWEPIVTEATYDAVRARL-ADPARKSNRKGTHRRHLGSGLFLCGECDKPMRTHNS---- 298 Query: 310 VRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXX 369 RY C PD L V++ + V RL Sbjct: 299 --RYRC---PD----AHLMRSRGQVDDFVLRVVRARL--ARPDLRDLLASSNDDESASLT 347 Query: 370 XXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGT 429 + RL + Y +G I R + A R+ AA+ A+T +A ++ Sbjct: 348 AEIEDQRRRLAAIEHDYDEGHIDGRRYAEASGKARARLDAAQARRTALTAGSAASGILDA 407 Query: 430 GGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWR 478 + +D LG ++ +I A+L ++ G+R + D V WR Sbjct: 408 PDPV-AAFDSASLGARRTVIDALLSVRLMR-APVGSRTFNPDSVHIEWR 454 >tr|C0U5N9|C0U5N9_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Geodermatophilus obscurus DSM 43160] Length = 484 Score = 167 bits (424), Expect = 2e-39 Identities = 141/481 (29%), Positives = 218/481 (45%), Gaps = 23/481 (4%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGW---PVGAEYVDNDVSAF--SGKPRRE 70 AAIY RIS D EG GLGV RQ +DCR L E W P Y DND+ A S K R E Sbjct: 9 AAIYVRISDDREGQGLGVTRQEQDCRALTERLEWTLHPHRPVYSDNDIGASTKSRKARPE 68 Query: 71 YARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDG 130 +A +LA + +G D ++ Y+ RL RRP+E E L E GVR + V+ +DL DG Sbjct: 69 FAELLAAVRAGTVDGILYYSTSRLTRRPMEYEGIKALVEDTGVRLASVVSGQVDLTTADG 128 Query: 131 LFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGS-ARPFGYEADKITVRESEAAVV 189 + I A F A E+ R S R+RR +Q+ +AG PH + RPFGY+ I V EAA + Sbjct: 129 RLLGGIMAQFDAAEAERISERVRRTFVQHREAGRPHTTGTRPFGYKPGGIKVDAVEAAAI 188 Query: 190 REMVDRYLAGQSLRS-----LTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRG 244 R+ V+ ++ +++++ + W + + + W V +VL+ R AGL E+ G Sbjct: 189 RDAVE-WITDENVQASLGDVVRAW-TAAGLETVTGRPWSRVMVSKVLTRPRNAGLVEYLG 246 Query: 245 EVIGPAVWPAIITPAERDRVLARMAARS-VTKSRTARTYXXXXXXXXXXXXXXXYSQARH 303 E++G + AI+T E V +AARS + +R +R + Sbjct: 247 EIVGRGSFDAILTEDELRAVREALAARSGLVTARYSRRQHLLSGLIYCGVCGGRMKVSAR 306 Query: 304 SNPQNRVRR---YVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXX 360 + + VR C+K D+GGCG + E + AV RL Sbjct: 307 RDAEGAVRADSFVSCVK--DNGGCGHVKRNLRLAEAFILGAVERRLADATAFADPDDDSE 364 Query: 361 XXXXXXXXXXXXXXXQGRLDELAGLYADGA-ITAREWIAARDPITERITAARRDIAAVTD 419 + +++ L L D TA +++ + +RI +A V + Sbjct: 365 AAQEAARLTAERDTLRAKVERLQKLMLDDPDFTAEDFVPMIRKLRDRIREVEALLADV-E 423 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQ--QAIIKAVLDHAVIAPGTPGARRLDIDRVAPIW 477 A + +G + G D R+ +A++ ++ H + G +R + + IW Sbjct: 424 LPARRDALGEDPLADWQAGGFDERREVLEALVAQIVLHPIGKVGPARSRAMVPETTQIIW 483 Query: 478 R 478 R Sbjct: 484 R 484 >tr|Q82EZ5|Q82EZ5_STRAW Tax_Id=33903 (int11)SubName: Full=Putative serine-family recombinase/integrase;[Streptomyces avermitilis] Length = 477 Score = 167 bits (422), Expect = 4e-39 Identities = 119/340 (35%), Positives = 165/340 (48%), Gaps = 14/340 (4%) Query: 18 IYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRRE-YARMLA 76 IY RIS D EG LGVARQ DC +LA+ R W Y DNDVSA+ RE + ML+ Sbjct: 7 IYTRISRDDEGDALGVARQHRDCERLADLRSWQAVKVYEDNDVSAYKRHVVREQFELMLS 66 Query: 77 DLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMARI 136 DL +G D ++ Y+LDRL R+P +LE + + + + ATVT D++LG DG M+RI Sbjct: 67 DLGAGLIDGIVAYDLDRLARQPRDLERLIEIFDERPRLEFATVTNDVNLGTPDGRTMSRI 126 Query: 137 FAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-EADKITVRESEAAVVREMVDR 195 AFA K S S RI+RK L+ AQ G G P+G+ + D+ V AA +RE Sbjct: 127 MVAFANKSSHDASRRIKRKHLELAQQGKDSGGPAPYGWLKEDRSKVDPKAAAAIREAQRE 186 Query: 196 YLAGQSLRSL-TIWLNESQITPSV-AKSWQTSAVRQVLSSGRIAGLREHRGEVIGP---- 249 LAG + ++ T W + P K V +L+S R+ G R + GEV+ Sbjct: 187 ILAGVRIGTIRTRWQEQGLGNPRAGTKRMAHHHVEHILTSPRLVGYRTYHGEVLNDEDGR 246 Query: 250 ---AVWPAIITPAERDRVLARMAARSVTK--SRTARTYXXXXXXXXXXXXXXXYSQARHS 304 W AI T E + V A +A R + AR Y Q Sbjct: 247 PVMGEWEAINTLEEWEAVCAAVAERKQKQPGRSLARKYMLSGIARCGLCKTKIRGQINQR 306 Query: 305 -NPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVL 343 P ++ ++ +GGCG++ V PV+ L+ E L Sbjct: 307 WQPGSKATKFTYQCSVVNGGCGKVGRVGEPVDRLIAELAL 346 >tr|Q7VEX0|Q7VEX0_MYCBO Tax_Id=1765 SubName: Full=Probable phiRv1 integrase;[Mycobacterium bovis] Length = 469 Score = 164 bits (416), Expect = 2e-38 Identities = 151/492 (30%), Positives = 211/492 (42%), Gaps = 60/492 (12%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AA+Y RIS D G LGVARQ EDC KL R W V EY+DNDVSA +GK R Y +ML Sbjct: 9 AAVYLRISEDRSGEQLGVARQREDCLKLCGQRKW-VPVEYLDNDVSASTGKRRPAYEQML 67 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 AD+ +G AV+ ++LDRLHRRP+ELE F++L + + +ATV D+DL G +AR Sbjct: 68 ADITAGKIAAVVAWDLDRLHRRPIELEAFMSLADEKRLA-LATVAGDVDLATPQGRLVAR 126 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-------EADKITVRESEAAV 188 + + AA E+ K AR RR Q A+ G P+ S + FGY E D T A + Sbjct: 127 LKGSVAAHETEHKKARQRRAARQKAERGHPNWS-KAFGYLPGPNGPEPDPRT-----APL 180 Query: 189 VREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 V++ LAG SL + N++ + W T+ + + L R AGLR ++G G Sbjct: 181 VKQAYADILAGASLGDVCRQWNDAGAFTITGRPWTTTTLSKFLRKPRNAGLRAYKGARYG 240 Query: 249 PAVWPAIITPAERDRVL------ARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR 302 P AI+ A+ ++ A A R + Sbjct: 241 PVDRDAIVGKAQWSPLVDEATFWAAQAVLDAPGRAPGRKSVRRHLLTGLAGCGKCGNHLA 300 Query: 303 HSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXX 362 S + YVC C + ++A +E +L V RL Sbjct: 301 GSYRTDGQVVYVC------KACHGVAILADNIEPILYHIVAERLAMPDAVDLLRREIHDA 354 Query: 363 XXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERIT---AARRDIAAVTD 419 G LD LA A+G +TAR+ + D + +IT A ++D + Sbjct: 355 AEAETIRLELETLYGELDRLAVERAEGLLTARQVKISTDIVNAKITKLQARQQD----QE 410 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQQAI----------IKAVLD---HAVIAPGTPGAR 466 VF DG+ LG Q +AVLD V+ P R Sbjct: 411 RLRVF-------------DGIPLGTPQVAGMIAELSPDRFRAVLDVLAEVVVQPVGKSGR 457 Query: 467 RLDIDRVAPIWR 478 + +RV WR Sbjct: 458 IFNPERVQVNWR 469 >tr|O06604|O06604_MYCTU Tax_Id=1773 SubName: Full=Probable phiRv1 integrase;[Mycobacterium tuberculosis] Length = 469 Score = 164 bits (416), Expect = 2e-38 Identities = 151/492 (30%), Positives = 211/492 (42%), Gaps = 60/492 (12%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AA+Y RIS D G LGVARQ EDC KL R W V EY+DNDVSA +GK R Y +ML Sbjct: 9 AAVYLRISEDRSGEQLGVARQREDCLKLCGQRKW-VPVEYLDNDVSASTGKRRPAYEQML 67 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 AD+ +G AV+ ++LDRLHRRP+ELE F++L + + +ATV D+DL G +AR Sbjct: 68 ADITAGKIAAVVAWDLDRLHRRPIELEAFMSLADEKRLA-LATVAGDVDLATPQGRLVAR 126 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-------EADKITVRESEAAV 188 + + AA E+ K AR RR Q A+ G P+ S + FGY E D T A + Sbjct: 127 LKGSVAAHETEHKKARQRRAARQKAERGHPNWS-KAFGYLPGPNGPEPDPRT-----APL 180 Query: 189 VREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 V++ LAG SL + N++ + W T+ + + L R AGLR ++G G Sbjct: 181 VKQAYADILAGASLGDVCRQWNDAGAFTITGRPWTTTTLSKFLRKPRNAGLRAYKGARYG 240 Query: 249 PAVWPAIITPAERDRVL------ARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR 302 P AI+ A+ ++ A A R + Sbjct: 241 PVDRDAIVGKAQWSPLVDEATFWAAQAVLDAPGRAPGRKSVRRHLLTGLAGCGKCGNHLA 300 Query: 303 HSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXX 362 S + YVC C + ++A +E +L V RL Sbjct: 301 GSYRTDGQVVYVC------KACHGVAILADNIEPILYHIVAERLAMPDAVDLLRREIHDA 354 Query: 363 XXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERIT---AARRDIAAVTD 419 G LD LA A+G +TAR+ + D + +IT A ++D + Sbjct: 355 AEAETIRLELETLYGELDRLAVERAEGLLTARQVKISTDIVNAKITKLQARQQD----QE 410 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQQAI----------IKAVLD---HAVIAPGTPGAR 466 VF DG+ LG Q +AVLD V+ P R Sbjct: 411 RLRVF-------------DGIPLGTPQVAGMIAELSPDRFRAVLDVLAEVVVQPVGKSGR 457 Query: 467 RLDIDRVAPIWR 478 + +RV WR Sbjct: 458 IFNPERVQVNWR 469 >tr|A5U2U2|A5U2U2_MYCTA Tax_Id=419947 SubName: Full=Putative integrase;[Mycobacterium tuberculosis] Length = 469 Score = 164 bits (416), Expect = 2e-38 Identities = 151/492 (30%), Positives = 211/492 (42%), Gaps = 60/492 (12%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AA+Y RIS D G LGVARQ EDC KL R W V EY+DNDVSA +GK R Y +ML Sbjct: 9 AAVYLRISEDRSGEQLGVARQREDCLKLCGQRKW-VPVEYLDNDVSASTGKRRPAYEQML 67 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 AD+ +G AV+ ++LDRLHRRP+ELE F++L + + +ATV D+DL G +AR Sbjct: 68 ADITAGKIAAVVAWDLDRLHRRPIELEAFMSLADEKRLA-LATVAGDVDLATPQGRLVAR 126 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-------EADKITVRESEAAV 188 + + AA E+ K AR RR Q A+ G P+ S + FGY E D T A + Sbjct: 127 LKGSVAAHETEHKKARQRRAARQKAERGHPNWS-KAFGYLPGPNGPEPDPRT-----APL 180 Query: 189 VREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 V++ LAG SL + N++ + W T+ + + L R AGLR ++G G Sbjct: 181 VKQAYADILAGASLGDVCRQWNDAGAFTITGRPWTTTTLSKFLRKPRNAGLRAYKGARYG 240 Query: 249 PAVWPAIITPAERDRVL------ARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR 302 P AI+ A+ ++ A A R + Sbjct: 241 PVDRDAIVGKAQWSPLVDEATFWAAQAVLDAPGRAPGRKSVRRHLLTGLAGCGKCGNHLA 300 Query: 303 HSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXX 362 S + YVC C + ++A +E +L V RL Sbjct: 301 GSYRTDGQVVYVC------KACHGVAILADNIEPILYHIVAERLAMPDAVDLLRREIHDA 354 Query: 363 XXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERIT---AARRDIAAVTD 419 G LD LA A+G +TAR+ + D + +IT A ++D + Sbjct: 355 AEAETIRLELETLYGELDRLAVERAEGLLTARQVKISTDIVNAKITKLQARQQD----QE 410 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQQAI----------IKAVLD---HAVIAPGTPGAR 466 VF DG+ LG Q +AVLD V+ P R Sbjct: 411 RLRVF-------------DGIPLGTPQVAGMIAELSPDRFRAVLDVLAEVVVQPVGKSGR 457 Query: 467 RLDIDRVAPIWR 478 + +RV WR Sbjct: 458 IFNPERVQVNWR 469 >tr|Q7D5I2|Q7D5I2_MYCTU Tax_Id=1773 SubName: Full=Integrase, putative;[Mycobacterium tuberculosis] Length = 463 Score = 164 bits (416), Expect = 2e-38 Identities = 151/492 (30%), Positives = 211/492 (42%), Gaps = 60/492 (12%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AA+Y RIS D G LGVARQ EDC KL R W V EY+DNDVSA +GK R Y +ML Sbjct: 3 AAVYLRISEDRSGEQLGVARQREDCLKLCGQRKW-VPVEYLDNDVSASTGKRRPAYEQML 61 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 AD+ +G AV+ ++LDRLHRRP+ELE F++L + + +ATV D+DL G +AR Sbjct: 62 ADITAGKIAAVVAWDLDRLHRRPIELEAFMSLADEKRLA-LATVAGDVDLATPQGRLVAR 120 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-------EADKITVRESEAAV 188 + + AA E+ K AR RR Q A+ G P+ S + FGY E D T A + Sbjct: 121 LKGSVAAHETEHKKARQRRAARQKAERGHPNWS-KAFGYLPGPNGPEPDPRT-----APL 174 Query: 189 VREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 V++ LAG SL + N++ + W T+ + + L R AGLR ++G G Sbjct: 175 VKQAYADILAGASLGDVCRQWNDAGAFTITGRPWTTTTLSKFLRKPRNAGLRAYKGARYG 234 Query: 249 PAVWPAIITPAERDRVL------ARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR 302 P AI+ A+ ++ A A R + Sbjct: 235 PVDRDAIVGKAQWSPLVDEATFWAAQAVLDAPGRAPGRKSVRRHLLTGLAGCGKCGNHLA 294 Query: 303 HSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXX 362 S + YVC C + ++A +E +L V RL Sbjct: 295 GSYRTDGQVVYVC------KACHGVAILADNIEPILYHIVAERLAMPDAVDLLRREIHDA 348 Query: 363 XXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERIT---AARRDIAAVTD 419 G LD LA A+G +TAR+ + D + +IT A ++D + Sbjct: 349 AEAETIRLELETLYGELDRLAVERAEGLLTARQVKISTDIVNAKITKLQARQQD----QE 404 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQQAI----------IKAVLD---HAVIAPGTPGAR 466 VF DG+ LG Q +AVLD V+ P R Sbjct: 405 RLRVF-------------DGIPLGTPQVAGMIAELSPDRFRAVLDVLAEVVVQPVGKSGR 451 Query: 467 RLDIDRVAPIWR 478 + +RV WR Sbjct: 452 IFNPERVQVNWR 463 >tr|A4KLZ0|A4KLZ0_MYCTU Tax_Id=395095 SubName: Full=Integrase;[Mycobacterium tuberculosis str. Haarlem] Length = 463 Score = 164 bits (416), Expect = 2e-38 Identities = 151/492 (30%), Positives = 211/492 (42%), Gaps = 60/492 (12%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AA+Y RIS D G LGVARQ EDC KL R W V EY+DNDVSA +GK R Y +ML Sbjct: 3 AAVYLRISEDRSGEQLGVARQREDCLKLCGQRKW-VPVEYLDNDVSASTGKRRPAYEQML 61 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 AD+ +G AV+ ++LDRLHRRP+ELE F++L + + +ATV D+DL G +AR Sbjct: 62 ADITAGKIAAVVAWDLDRLHRRPIELEAFMSLADEKRLA-LATVAGDVDLATPQGRLVAR 120 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY-------EADKITVRESEAAV 188 + + AA E+ K AR RR Q A+ G P+ S + FGY E D T A + Sbjct: 121 LKGSVAAHETEHKKARQRRAARQKAERGHPNWS-KAFGYLPGPNGPEPDPRT-----APL 174 Query: 189 VREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 V++ LAG SL + N++ + W T+ + + L R AGLR ++G G Sbjct: 175 VKQAYADILAGASLGDVCRQWNDAGAFTITGRPWTTTTLSKFLRKPRNAGLRAYKGARYG 234 Query: 249 PAVWPAIITPAERDRVL------ARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQAR 302 P AI+ A+ ++ A A R + Sbjct: 235 PVDRDAIVGKAQWSPLVDEATFWAAQAVLDAPGRAPGRKSVRRHLLTGLAGCGKCGNHLA 294 Query: 303 HSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXX 362 S + YVC C + ++A +E +L V RL Sbjct: 295 GSYRTDGQVVYVC------KACHGVAILADNIEPILYHIVAERLAMPDAVDLLRREIHDA 348 Query: 363 XXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERIT---AARRDIAAVTD 419 G LD LA A+G +TAR+ + D + +IT A ++D + Sbjct: 349 AEAETIRLELETLYGELDRLAVERAEGLLTARQVKISTDIVNAKITKLQARQQD----QE 404 Query: 420 TTAVFELVGTGGALRTEWDGLDLGRQQAI----------IKAVLD---HAVIAPGTPGAR 466 VF DG+ LG Q +AVLD V+ P R Sbjct: 405 RLRVF-------------DGIPLGTPQVAGMIAELSPDRFRAVLDVLAEVVVQPVGKSGR 451 Query: 467 RLDIDRVAPIWR 478 + +RV WR Sbjct: 452 IFNPERVQVNWR 463 >tr|C5BWV1|C5BWV1_BEUC1 Tax_Id=471853 SubName: Full=Resolvase domain protein;[Beutenbergia cavernae] Length = 494 Score = 164 bits (415), Expect = 2e-38 Identities = 109/256 (42%), Positives = 133/256 (51%), Gaps = 15/256 (5%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAF--SGKPRREYAR 73 AA+Y RIS+D EG LGVARQ EDCR LA+ G V A + DNDVSA S K R Y Sbjct: 11 AALYVRISADPEGRELGVARQEEDCRALAQRLGLEVVAVFADNDVSASTRSTKKRPRYDA 70 Query: 74 MLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFM 133 ML +G+ A++ Y+ RL RRP E+E+ + L E GVR V+ D DL DG + Sbjct: 71 MLESARAGEFGAILAYSNSRLTRRPREVEDLIELAERDGVRLHTVVSGDDDLSTADGRMV 130 Query: 134 ARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMV 193 ARI ES R S R +R LQ AQAG G RPFGY + EAA +R Sbjct: 131 ARIKGNVDTAESERTSERAQRAKLQAAQAGRYRGGPRPFGYRRGGLEPEPLEAAALRGAA 190 Query: 194 DRYLAGQSLRSLTIWLNESQIT-------------PSVAKSWQTSAVRQVLSSGRIAGLR 240 + AG SLRS + T P + +R+VL R AGL Sbjct: 191 ESIAAGGSLRSAASRIAADGFTSSGRRKPGSGPDGPIQRRPIDALWLRRVLLRPRNAGLL 250 Query: 241 EHRGEVIGPAVWPAII 256 EHRG V+GPA WPAI+ Sbjct: 251 EHRGGVVGPAEWPAIV 266 >tr|A8LEZ5|A8LEZ5_FRASN Tax_Id=298653 SubName: Full=Recombinase;[Frankia sp.] Length = 385 Score = 164 bits (415), Expect = 2e-38 Identities = 122/392 (31%), Positives = 178/392 (45%), Gaps = 18/392 (4%) Query: 99 VELEEFVTLCESVGVRDVATVTA-DIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKML 157 +ELE+ + L E GV D+ATVTA ++DL G ARI A A ES +K+ R+RR+ Sbjct: 1 MELEKIINLVERKGV-DLATVTAGEVDLSTATGRAAARIVGAMARHESEQKAERLRRQKQ 59 Query: 158 QNAQAGLPHGSA-RPFGYEADKITVRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITP 216 Q A+ GL G R FGYE D +T+RE EA ++RE DR LAG+++ S+ I Sbjct: 60 QAAEKGLVSGGGHRAFGYERDGLTIREPEAELIREAADRVLAGETIASVCRDFEARDIRT 119 Query: 217 SVAKSWQTSAVRQVLSSGRIAGLREHR---------GEVIGPAVWPAIITPAERDRVLAR 267 + W+ +RQ+L S RI+G REHR GE++ AVWP II+ + D + A+ Sbjct: 120 TAGNWWKPLTLRQMLCSARISGRREHRPGKSSTAIIGEIVADAVWPGIISTEDSDELRAQ 179 Query: 268 MAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVCLKGPDHGGCGRL 327 + R+ T T T + H+ R RRY C P CGRL Sbjct: 180 L-GRTGTGRITGATGRVYLLSGILRCGICTGRISGHNT--GRGRRYYCPGAPGSTSCGRL 236 Query: 328 TVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYA 387 T+ + + + VL LDS LDE Sbjct: 237 TMGMDRTDIHIRDTVLLALDSPDFRERLHRRAKVDPAIRTSVKNDERLLSELDEDR---T 293 Query: 388 DGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQA 447 G I+ W+ D + R+ RR +AAV A+ L G+ + W+ ++ +++A Sbjct: 294 AGRISRARWLQMSDTVNARLETNRRKLAAVPSLRALEGLDGSYEEMLPVWEARNISQRRA 353 Query: 448 IIKAVLDHAVIAPGTPGARRLDIDRVAPIWRV 479 I+ A + H ++ D DR P W V Sbjct: 354 IVTACVSHIIVNRAARRGPVFDPDRFDPQWLV 385 >tr|C2AJU8|C2AJU8_TSUPA Tax_Id=521096 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Tsukamurella paurometabola DSM 20162] Length = 460 Score = 163 bits (412), Expect = 5e-38 Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 15/465 (3%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 A IY RIS D E G+ RQ +DC LA + GW V Y +N+ SA + + R E+ ML Sbjct: 3 AVIYCRISQDREDGAAGIDRQEQDCLALAAEHGWNVIKVYRENNTSASAARRRPEFQAML 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 LA+G ++ Y+ DR +R+ +L + ++C + ++ +DL G+ +A Sbjct: 63 KHLATGTVGGLLFYHPDRAYRKLDDLVDLTSVCIKLKIQIHTVKAGRVDLSTATGIAVAE 122 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 + A FA E+ R RI+R Q A G G ARPFGY+ + + EA +R Sbjct: 123 MSAVFAKLETARMGERIKRSKQQTAAEGRYRGGARPFGYKDGGMELEPHEADAIRTASTD 182 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWPAI 255 L+G SL ++ N++ + + +WQ + +R+VL R AGL E G +IGPA WPAI Sbjct: 183 LLSGTSLTRISRNWNDAGLRTARGGTWQATNLRKVLQRPRNAGLVEMDGNIIGPAAWPAI 242 Query: 256 ITPAERDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVC 315 +T D++ A + S RT TY + R + + Y C Sbjct: 243 VT---EDQLRAVTSLLSDPSRRTTTTYERKHMGRGIFLCGKCGASMRVF--KLKTPTYRC 297 Query: 316 LKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXX 375 + P L++ + + +++ ++ + Sbjct: 298 VDQP------HLSIQKSLADSVVSNVIIAAFNEQGVQNLIRRSAYPAVDVDALTAERADV 351 Query: 376 QGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRT 435 ++DE ++ +G +T + + ER+TA R++A+ T E R Sbjct: 352 SAKIDERTDMFDNGEMTRDSYRKSTARFRERLTAIERELASAT-VPEQLEDADQFDDFRD 410 Query: 436 EWDGLDLGRQQAIIKAVLDHAVIAPGTPGAR--RLDIDRVAPIWR 478 W+ + RQ II +L ++ G+ GA+ I+R+ W+ Sbjct: 411 YWESISPDRQGKIIDRLLTVTILPVGS-GAQTSAAKIERIQIEWK 454 >tr|Q2JAF2|Q2JAF2_FRASC Tax_Id=106370 SubName: Full=Recombinase;[Frankia sp.] Length = 497 Score = 155 bits (392), Expect = 1e-35 Identities = 146/492 (29%), Positives = 212/492 (43%), Gaps = 43/492 (8%) Query: 4 RKSAGQRVGVG-SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSA 62 RK A + G SAAIY RIS + GV RQ CR++ G V +VDN+ SA Sbjct: 23 RKRASREDWAGQSAAIYCRISHVADEDQTGVDRQERICREVVRRLGLRVAHVFVDNNRSA 82 Query: 63 FS-GKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVAT--V 119 + + R+ + R+L +G+ V+ Y+ DRL R+P +LEE + + + RD+ Sbjct: 83 WKRDRKRKGWDRLLEVARAGEVQHVVAYHPDRLMRQPKDLEELLAISDD---RDITLHGQ 139 Query: 120 TADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKI 179 DL + D F RI A A + S S R++ M+ A G PH R FGY D + Sbjct: 140 ANQRDLSDPDDRFFLRIEVAHACRSSDDTSRRMKDAMVDRANDGKPHPGKRRFGYTPDGM 199 Query: 180 TVRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGL 239 ++ E+EA V R++ RYL G + + LNE + + W +V VL S AG+ Sbjct: 200 SIVEAEAEVARDIAARYLDGATSIQIAAVLNEQGKVTASGRPWDEFSVLAVLDSHHAAGI 259 Query: 240 REHRGEVIGPAVWPAIITPAE----RDRVLARMAARSVTKSRTARTYXXXXXXXXXXXXX 295 R RGE IG +WPAI P RDR R AA + T++ AR + Sbjct: 260 RVFRGEEIGQGIWPAIFDPGTWAEIRDRRSYRAAAHAATRT-PARFFLLRGIVTCKRCGT 318 Query: 296 XXYSQARHSNPQNRVRRYVCLK--GPDHGGCGRLTVVAAPVEELLTEA---VLTRLDSXX 350 H +P Y+C + D C R + A +E +T+A +LTRLD Sbjct: 319 RMAGTGGHVSP-----GYLCSRKYRTDEQKCSR-RINAPALEAFVTDAAVDLLTRLD--- 369 Query: 351 XXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAA 410 L EL ++ I +RE+ R + ERI Sbjct: 370 ----PSGQEAAATLTDADQAAIEEDNAELAELKAMWNAREIKSREYREMRRTVEERIKKV 425 Query: 411 RRDIAAVTDTTAVFELVG-TGGALRTEWDGL----DLGRQQAIIK-----AVLDHAVIAP 460 +R AV L G TG R WD L + R A+++ V+D + + Sbjct: 426 QRKTVV---RPAVEVLAGLTGPHARAAWDALVEAEEYERMNAVLRFLFAAVVIDESRVPR 482 Query: 461 GTPGARRLDIDR 472 G R+ ID+ Sbjct: 483 GQFDYSRIHIDQ 494 >tr|A5CTD1|A5CTD1_CLAM3 Tax_Id=443906 (intA)SubName: Full=Putative integrase/recombinase;[Clavibacter michiganensis subsp. michiganensis] Length = 567 Score = 154 bits (388), Expect = 3e-35 Identities = 108/282 (38%), Positives = 148/282 (52%), Gaps = 12/282 (4%) Query: 8 GQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVS----AF 63 G R+ +AAIY RIS D G GLGV RQL+DC+ LA+ G V Y DND+S A Sbjct: 5 GVRIIDETAAIYTRISRDSAGEGLGVERQLDDCQLLAQRLGLAVVKVYSDNDISASDVAV 64 Query: 64 SGKPRREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADI 123 K R Y+ MLAD +G +I ++ RL RR +ELE+ + L + GV + Sbjct: 65 KKKARPGYSSMLADARAGAFTHIIAHSNSRLTRRMLELEDLIKLFDQTGVVIQTVKSGQD 124 Query: 124 DLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAG-LPHGSARPFGYEADKITVR 182 DL DG +ARI A+ ES R S R + Q A G + + RPFG++ D +T Sbjct: 125 DLSTSDGRMVARIKASVDIAESDRISERAKAAHRQKALKGEVKVQAKRPFGFQKDCVTHE 184 Query: 183 ESEAAVVREMVDRYLAGQSLRSL-TIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLRE 241 +EAA++RE V + + G + + W T + W+ +R+VL R G+RE Sbjct: 185 PTEAALIREAVMKIIGGAPITQIQQEWKAAGIKTSTGLDEWRWLPLRRVLLGARTVGIRE 244 Query: 242 HRGE---VIGPAV---WPAIITPAERDRVLARMAARSVTKSR 277 ++GE V G V W IIT AERD+ LA + RS TK R Sbjct: 245 YKGEELFVDGEVVMGNWEPIITVAERDQALAVLQGRSKTKVR 286 >tr|C9YWJ6|C9YWJ6_STRSW Tax_Id=680198 SubName: Full=Putative transposase;[Streptomyces scabies] Length = 483 Score = 152 bits (385), Expect = 7e-35 Identities = 145/476 (30%), Positives = 208/476 (43%), Gaps = 36/476 (7%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAE--YVDNDVSAFSGKPRRE-YA 72 AAIY RIS + GV RQ CR++AE V + YVDN+ SA+ +R + Sbjct: 17 AAIYCRISHTRDEDQTGVDRQERICREIAERLQLRVESTHVYVDNNRSAWQRNRKRPGWE 76 Query: 73 RMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLF 132 ML + G+ VIVY+ DRL R+P +LEE +++ + + DL + D F Sbjct: 77 EMLKAMGEGEIRHVIVYHPDRLMRQPKDLEELLSIADDKRILLHGEANRR-DLSDPDDRF 135 Query: 133 MARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREM 192 + RI A A + S S R++ + +A+ G PH RP+GY D + E EA +VRE+ Sbjct: 136 ILRIEVAHACRSSDDTSRRLKEALKDHAREGRPHVGNRPYGYTRDGRAIVEEEAEIVREV 195 Query: 193 VDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVW 252 R+L G+S + L I S K+W VR +LSS +AGLR H GE + W Sbjct: 196 YRRFLDGESPNHIAQDLAARGIPTSKGKTWNPENVRHLLSSHFVAGLRFHLGEEVAVGTW 255 Query: 253 PAIITPAERDRVLA----RMAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQARHSNPQN 308 PAII + D V R TK R R Y AR S + Sbjct: 256 PAIIDRGQWDEVQRLKEYRAQQHRDTKKRPLRNYILRGVVTCACG-------ARMSGSNS 308 Query: 309 -RVRRYVCLK--GPDHGGCGRLTVVAAPVEELLTEA---VLTRLDSXXXXXXXXXXXXXX 362 R Y C + D C R +V A P+E + + VLT+LD+ Sbjct: 309 VRYPYYRCTRADNTDQEKCNR-SVSAVPLEAFVRDVAIKVLTQLDT------SGYEPATT 361 Query: 363 XXXXXXXXXXXXXQGRLDELAGLY-ADGAITAREWIAARDPITERITAARRDIAAVTDTT 421 + +L EL ++ +D T ++ A R PI +R+ +R V Sbjct: 362 TRPEADTIADEKDRTKLRELKEMWLSDDDFTTADFKAMRAPIIKRMKERQR--KTVKRPI 419 Query: 422 AVFELVGTGGALRTEWDGL----DLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRV 473 AV E + G + W+ L D R AI + + ++ P T R D DRV Sbjct: 420 AVLEGI-AGPEAQVNWERLEEVEDHARMNAIYRFLFAAVIVRPPTRKGRGFDTDRV 474 >tr|Q1B5B2|Q1B5B2_MYCSS Tax_Id=164756 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 469 Score = 151 bits (382), Expect = 2e-34 Identities = 136/485 (28%), Positives = 206/485 (42%), Gaps = 40/485 (8%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AAIY RIS D G GLGV RQL+ C LA+ GW V Y DND+SA++GK R + +L Sbjct: 3 AAIYTRISKDQTGEGLGVQRQLDACLALADRLGWAVVTRYDDNDLSAYNGKTRPGFEALL 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCE-SVGVRDVATVT-ADIDLGNDDGLFM 133 + G+ DAVI ++ DRL+R L++ V L E +VG+ D+ TV D+DL G + Sbjct: 63 DGMKRGEFDAVICWHTDRLYR---SLKDLVRLLEVAVGI-DIRTVCGGDLDLSTPTGRML 118 Query: 134 ARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMV 193 A I A +ES K R R Q A AG H + RPFGY + E EA+ VR+ Sbjct: 119 ATILGGVAVQESEHKGERQREANEQRAAAGRWHTANRPFGYTMSGEAL-EPEASAVRQAA 177 Query: 194 DRYLAGQSLRSLTIWLNESQITPSVA----KS------------WQTSAVRQVLSSGRIA 237 LAG+S+R + + NE+ + ++A KS W VRQ+L R A Sbjct: 178 ADVLAGKSIRRVAMEWNEAGLRSTLAGRERKSKDGTVVKVVDGRWNAPRVRQLLLRPRYA 237 Query: 238 GLREHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTART-YXXXXXXXXXXXXXX 296 GLR +RG+V+G W +I ++A ++ SR RT + Sbjct: 238 GLRVYRGKVVGKGDWEPLIDEDTHRGLVAFLS----DPSRAPRTKFERKYQGAGVYRCGK 293 Query: 297 XYSQARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXX 356 R P+ R Y+C + + ++ + VL RL Sbjct: 294 CGGPMRTGKPKGGRRTYLCRE------YSHVVRQGESLDRYVEMLVLDRLS--RPDVHLV 345 Query: 357 XXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARR---D 413 Q RLDE AG++A I + + + + + D Sbjct: 346 LAGGDRLDLPTLHARREALQARLDEAAGMFAKREIDGAQLRRITNDLRTEVAGVDKVLAD 405 Query: 414 IAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRV 473 A V+ T + ++ W+ L + +I ++ + P G + + Sbjct: 406 AARVSPVTGLISESTDRDEVQQRWEALSPDLRGKVIDELMT-VTVQPAPRGTNGFHPEHI 464 Query: 474 APIWR 478 + W+ Sbjct: 465 SVEWK 469 >tr|A1UJS5|A1UJS5_MYCSK Tax_Id=189918 SubName: Full=Recombinase;[Mycobacterium sp.] Length = 469 Score = 151 bits (382), Expect = 2e-34 Identities = 136/485 (28%), Positives = 206/485 (42%), Gaps = 40/485 (8%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AAIY RIS D G GLGV RQL+ C LA+ GW V Y DND+SA++GK R + +L Sbjct: 3 AAIYTRISKDQTGEGLGVQRQLDACLALADRLGWAVVTRYDDNDLSAYNGKTRPGFEALL 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCE-SVGVRDVATVT-ADIDLGNDDGLFM 133 + G+ DAVI ++ DRL+R L++ V L E +VG+ D+ TV D+DL G + Sbjct: 63 DGMKRGEFDAVICWHTDRLYR---SLKDLVRLLEVAVGI-DIRTVCGGDLDLSTPTGRML 118 Query: 134 ARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMV 193 A I A +ES K R R Q A AG H + RPFGY + E EA+ VR+ Sbjct: 119 ATILGGVAVQESEHKGERQREANEQRAAAGRWHTANRPFGYTMSGEAL-EPEASAVRQAA 177 Query: 194 DRYLAGQSLRSLTIWLNESQITPSVA----KS------------WQTSAVRQVLSSGRIA 237 LAG+S+R + + NE+ + ++A KS W VRQ+L R A Sbjct: 178 ADVLAGKSIRRVAMEWNEAGLRSTLAGRERKSKDGTVVKVVDGRWNAPRVRQLLLRPRYA 237 Query: 238 GLREHRGEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTART-YXXXXXXXXXXXXXX 296 GLR +RG+V+G W +I ++A ++ SR RT + Sbjct: 238 GLRVYRGKVVGKGDWEPLIDEDTHRGLVAFLS----DPSRAPRTKFERKYQGAGVYRCGK 293 Query: 297 XYSQARHSNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXX 356 R P+ R Y+C + + ++ + VL RL Sbjct: 294 CGGPMRTGKPKGGRRTYLCRE------YSHVVRQGESLDRYVEMLVLDRLS--RPDVHLV 345 Query: 357 XXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARR---D 413 Q RLDE AG++A I + + + + + D Sbjct: 346 LAGGDRLDLPTLHARREALQARLDEAAGMFAKREIDGAQLRRITNDLRTEVAGVDKVLAD 405 Query: 414 IAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRV 473 A V+ T + ++ W+ L + +I ++ + P G + + Sbjct: 406 AARVSPVTGLISESTDRDEVQQRWEALSPDLRGKVIDELMT-VTVQPAPRGTNGFHPEHI 464 Query: 474 APIWR 478 + W+ Sbjct: 465 SVEWK 469 >tr|D0WPX8|D0WPX8_9ACTO Tax_Id=649743 SubName: Full=Putative integrase;[Actinomyces sp. oral taxon 848 str. F0332] Length = 513 Score = 137 bits (345), Expect = 3e-30 Identities = 88/199 (44%), Positives = 111/199 (55%), Gaps = 3/199 (1%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAF-SGKPRREYARM 74 AAIY RIS D E GL + RQ EDC KLA+ RGW + YVD +SA K R Y RM Sbjct: 11 AAIYLRISLDREMDGLAIDRQREDCEKLAQFRGWEIVETYVDQSISASDKTKKRPGYLRM 70 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 +AD +G DA++ Y+LDRL R+P ELE+++ ES G+ + T D DL D G A Sbjct: 71 VADYEAGLLDAIVCYDLDRLTRQPRELEDWIDRAESRGLL-LVTANGDADLATDGGRMYA 129 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVD 194 RI AA A E RK AR R +Q A+ G P RP GY A V E EA V+ + Sbjct: 130 RIKAAVARAEVERKGARQSRTHVQRARQGRPPKGVRPLGY-ATSGEVIEYEAEAVKAIYA 188 Query: 195 RYLAGQSLRSLTIWLNESQ 213 +L G SL + L+ +Q Sbjct: 189 AFLRGDSLHGIARALSGAQ 207 >tr|C6RBF1|C6RBF1_9CORY Tax_Id=553206 SubName: Full=Recombinase;[Corynebacterium tuberculostearicum SK141] Length = 536 Score = 132 bits (332), Expect = 1e-28 Identities = 79/196 (40%), Positives = 111/196 (56%), Gaps = 3/196 (1%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRRE-YARM 74 AAIY R+S D +G G G+ RQ EDCR+LA +GW V EYVDN +SA +R Y RM Sbjct: 24 AAIYLRMSLDADGRGAGIERQREDCRRLAAAKGWEVVDEYVDNSISASKRNVKRHAYDRM 83 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 AD +G + +I ++ DRL R+P+++E ++T E G V T T + DL + G + Sbjct: 84 EADYEAGLFNTIICWHFDRLTRQPMQMERWLTRAED-GDLQVVTCTGNYDLETEQGRMLV 142 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVD 194 R+ AAFA E K+AR +R +LQNA+ G P+GY+ D V E A VR + Sbjct: 143 RVLAAFARGEIELKAARQKRAVLQNARKGGKPAGIPPYGYD-DDFNVIEDRAETVRGIYQ 201 Query: 195 RYLAGQSLRSLTIWLN 210 AG ++ + LN Sbjct: 202 AIQAGITMADIVRALN 217 >tr|Q37839|Q37839_9CAUD Tax_Id=10732 (ORF469)SubName: Full=ORF469 protein;[Streptomyces phage R4] Length = 469 Score = 129 bits (323), Expect = 1e-27 Identities = 88/250 (35%), Positives = 129/250 (51%), Gaps = 15/250 (6%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAF-SGKPRREYARM 74 A IY RIS D G LGV RQ E CR+L + G VG +VDND+SA R ++ M Sbjct: 10 ADIYVRISLDRTGEELGVERQEESCRELCKSLGMEVGQVWVDNDLSATKKNVVRPDFEAM 69 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 +A + A++ ++ DRL R +LE + L GV A + +DL G +A Sbjct: 70 IA----SNPQAIVCWHTDRLIRVTRDLERVIDL----GVNVHAVMAGHLDLSTPAGRAVA 121 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPH-GSARPFGYEADKITVRESEAAVVREMV 193 R A+A E +K+ R + +QNA+AG P+ RPFGY D +T+ +EA +R+ Sbjct: 122 RTVTAWATYEGEQKAERQKLANIQNARAGKPYTPGIRPFGYGDDHMTIVTAEADAIRDGA 181 Query: 194 DRYLAGQSLRSLTIWLNESQI-----TPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIG 248 L G SL ++ + E ++ + K W V++VL+S R G + GEV+G Sbjct: 182 KMILDGWSLSAVARYWEELKLQSPRSMAAGGKGWSLRGVKKVLTSPRYVGRSSYLGEVVG 241 Query: 249 PAVWPAIITP 258 A WP I+ P Sbjct: 242 DAQWPPILDP 251 >tr|Q2J5H0|Q2J5H0_FRASC Tax_Id=106370 SubName: Full=Recombinase;[Frankia sp.] Length = 432 Score = 125 bits (313), Expect = 2e-26 Identities = 123/447 (27%), Positives = 188/447 (42%), Gaps = 56/447 (12%) Query: 68 RREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGN 127 R +YA +LADL SG D IV++LDRL R +LE+ + + E G R + V +DL Sbjct: 3 RPDYAELLADLRSGFLDGAIVWDLDRLTRDLRDLEDAIEVVELYG-RPI--VGPGVDLTT 59 Query: 128 DDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAA 187 + G AR A A K S S R+RR Q A+ G+P G +RPFG++ DK T+ +EAA Sbjct: 60 EYGKANARAQAVAANKASADTSRRVRRSHKQRAERGVPVGGSRPFGWKDDKRTLDLTEAA 119 Query: 188 VVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRG--- 244 ++RE R LAG + L N + + + K W S+V +V + RI GLR RG Sbjct: 120 ILREGARRILAGVPVVDLVNEWNAAGVRGTRGKKWTKSSVLKVYRNPRICGLRS-RGVEE 178 Query: 245 --------------------------EVIGPAVWPAIITPAERDRVLARMAARS-VTKSR 277 EV W AII D+V+A++ R+ + Sbjct: 179 PNINGQVAKYMQVVTRKERTPDGRTIEVPVKGQWKAIIGVRRWDQVIAKIGDRTYAQQGH 238 Query: 278 TARTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVCLK--GPDHGGCGRLTVVAAPVE 335 +R Y ++ +P R R++ + P GGCG+++ + Sbjct: 239 NSRRYLLSGVVACGRC-----GRSMFGSPPYRERKHAIYRCPAPTQGGCGKVSRHGPHTD 293 Query: 336 ELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYAD--GAITA 393 + + A+ +++ Q + E + I+ Sbjct: 294 DHILAALFHKIE------LETASAVVDVAPWTGEAALAEVQESITETRAAWTSVPRRISP 347 Query: 394 REWIAARDPI--TERITAARRDIAAVTDTTAVFELVGTGGALRTEWDGLDLGRQQAIIKA 451 +++ + + E I R+ V A +R EWDG L RQ+AIIK Sbjct: 348 KDYFPTMEDLRAQEEILLRERNDHLVATANA----HARPADVRAEWDGYSLARQRAIIKE 403 Query: 452 VLDHAVIAPGTPGARRLDIDRVAPIWR 478 L V+ P G RR D D + P+WR Sbjct: 404 HLIAVVVHPAGRG-RRFDPDLLDPVWR 429 >tr|C2CSY0|C2CSY0_CORST Tax_Id=525268 SubName: Full=Recombinase;[Corynebacterium striatum ATCC 6940] Length = 503 Score = 125 bits (313), Expect = 2e-26 Identities = 81/192 (42%), Positives = 103/192 (53%), Gaps = 4/192 (2%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAF-SGKPRREYARM 74 AAIY RIS D GL + RQ +DC LAE RGW V YVD +SA R +Y M Sbjct: 5 AAIYLRISLDAAMDGLAIDRQRQDCEALAEQRGWDVVHTYVDQSISASKKDVDRPDYDAM 64 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 +A G+ DA+I +NLDRL R+P +LEE++ E G++ + T D+DL D G A Sbjct: 65 VASFERGEIDAIICWNLDRLTRQPAQLEEWIDRAEEQGLK-LVTANGDVDLATDGGRMYA 123 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPH-GSARPFGYEADKITVRESEAAVVREMV 193 RI AA A E RKS R R Q A+ G + G RP GY + + SEAA V M Sbjct: 124 RIKAAVARGEIERKSMRQSRAQQQRAEQGRWYSGGVRPIGYTSTG-EIIPSEAAAVIGMF 182 Query: 194 DRYLAGQSLRSL 205 G S+R + Sbjct: 183 RAVERGNSMRDI 194 >tr|C7NF29|C7NF29_KYTSD Tax_Id=478801 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Kytococcus sedentarius] Length = 529 Score = 121 bits (304), Expect = 2e-25 Identities = 120/461 (26%), Positives = 182/461 (39%), Gaps = 40/461 (8%) Query: 6 SAGQRVGVGSAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG 65 +A QR+ V +Y RIS D EGT GV RQ DCR AE G+ V + ++D AF Sbjct: 15 AAVQRLRV---VLYVRISDDPEGTEKGVERQEADCRDYAESLGFEVVEVFREDDTLAFKQ 71 Query: 66 KP-------------RREYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVG 112 + R + ML+ L G +A+I Y+LDR R P +LE+ + G Sbjct: 72 RTITLPTGEKVRRVVRPRFRAMLSFLTQGRAEAMIAYDLDRAVRDPRDLEDLIDAKVLYG 131 Query: 113 VRDVATVTADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPF 172 R V + T + L ND + MAR+ A K S + R+ R Q A G HG P+ Sbjct: 132 FR-VLSTTGSLRLDNDSDIAMARVLVEMANKSSADTARRVARASKQQAIDGKWHGGRAPY 190 Query: 173 GYEADKIT--VRESEAAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQV 230 GY T V +AA+VRE DR LAG+S+ ++ + + ++ K W SA+ ++ Sbjct: 191 GYRMGDSTLYVVPEQAALVREAADRLLAGESVYAIIQRWHRRGESSALGKRWTESALVRI 250 Query: 231 LSSGRIAGLREHR-----------GEVIGPAVWPAIITPAERDRVLARMAARSVTKSRTA 279 + + + G R + E + W I+ RV V +RTA Sbjct: 251 MRNPALKGARTYLPMLPDGSRSTVPETVTDGNWTPILDVTTWQRV------NDVLAARTA 304 Query: 280 RTYXXXXXXXXXXXXXXXYSQARHSNPQNRVRRYVCLKGPDHGGCGR---LTVVAAPVEE 336 ++ A R + C R +T V A VE+ Sbjct: 305 KSQGGPGAIKRVYPFTGLIRCAECGTAMYRQGDFYTCGNKQFNTCHRSVKMTEVTALVED 364 Query: 337 LLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREW 396 + +V +RL + L+ L + DG I W Sbjct: 365 AVL-SVFSRLALTPETLPARDGSETERAHDELSVLIDSDRTVLNRLDDDHYDGLIDRATW 423 Query: 397 IAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRTEW 437 R +TERI+ +R+ V ++ G + +EW Sbjct: 424 ARQRSRLTERISTRQREYQQHLARKPVLDVDIDLGTVASEW 464 >tr|C8NVR4|C8NVR4_9CORY Tax_Id=585529 SubName: Full=Integrase;[Corynebacterium genitalium ATCC 33030] Length = 503 Score = 120 bits (302), Expect = 3e-25 Identities = 80/192 (41%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAF-SGKPRREYARM 74 AAIY RIS D GL + RQ +DC LAE RGW V YVD +SA R +Y M Sbjct: 5 AAIYLRISLDAAMDGLAIDRQRQDCEALAEQRGWDVVHTYVDQSISASKKDVDRPDYDAM 64 Query: 75 LADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMA 134 +A G+ DA+I ++LDRL R+P +LEE++ E G++ + T D DL D G A Sbjct: 65 VASFERGEIDAIICWDLDRLTRQPWQLEEWIDRAEEQGLK-LVTANGDADLATDGGRMYA 123 Query: 135 RIFAAFAAKESGRKSARIRRKMLQNAQAGLPH-GSARPFGYEADKITVRESEAAVVREMV 193 RI AA A E RKS R R Q A+ G + G RP GY + + SEAA V M Sbjct: 124 RIKAAVARGEIERKSMRQSRAQQQRAEQGRWYSGGVRPIGYTSTG-EIIPSEAAAVLGMF 182 Query: 194 DRYLAGQSLRSL 205 G S+R + Sbjct: 183 RAVERGNSMRDI 194 >tr|C0W804|C0W804_9ACTO Tax_Id=525246 SubName: Full=Possible DNA recombinase; Flags: Fragment;[Actinomyces urogenitalis DSM 15434] Length = 378 Score = 116 bits (291), Expect = 6e-24 Identities = 75/186 (40%), Positives = 99/186 (53%), Gaps = 3/186 (1%) Query: 30 GLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSG-KPRREYARMLADLASGDRDAVIV 88 GL + RQ EDC LA R W V YVD +SA K R Y +M+AD +G DA++ Sbjct: 3 GLAIERQREDCENLARFRHWEVVETYVDQSISASDKTKKRPAYLQMVADYEAGLLDAIVC 62 Query: 89 YNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMARIFAAFAAKESGRK 148 Y+LDRL R+P ELE+++ ES G+ + T D DL D G ARI AA A E RK Sbjct: 63 YDLDRLTRQPRELEDWIDRAESRGLL-LVTANGDADLSTDGGRMYARIKAAVARAEVERK 121 Query: 149 SARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDRYLAGQSLRSLTIW 208 AR R +Q A+ G P RP GY + EA VR + +L G SL+ + Sbjct: 122 GARQSRAHVQRARQGRPPKGVRPLGYSTSG-QIIPHEAEGVRAIYAAFLRGDSLQGIARA 180 Query: 209 LNESQI 214 L+ +Q+ Sbjct: 181 LSGTQM 186 >tr|Q2J9Z8|Q2J9Z8_FRASC Tax_Id=106370 SubName: Full=Recombinase;[Frankia sp.] Length = 501 Score = 113 bits (282), Expect = 6e-23 Identities = 121/484 (25%), Positives = 194/484 (40%), Gaps = 62/484 (12%) Query: 36 QLEDCRKLAEDRGWPV-GAEYVDNDVSAFSGKPRRE-------------YARMLADLA-- 79 QL+DCR E RG + A Y + D SA+ + R+ Y +L DL Sbjct: 38 QLKDCRTFVESRGGVLLDAPYDEPDTSAWKKRRIRQPDGTIIYRVVRPKYEEVLRDLRRG 97 Query: 80 ---SGDR-DAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 +G+R D ++V ++DRL R +LE+ + + G R + ++ +DL D+G +AR Sbjct: 98 VARNGERLDGIVVADVDRLTRDQRDLEDAIEVVTQYG-RPIIDISGSLDLLTDNGRDVAR 156 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVREMVDR 195 I A++S S R+RRK L AQAG+ G R FG+ ADK T E AA++ D+ Sbjct: 157 IVVTLKARQSLDTSKRVRRKHLAMAQAGITVGGNRAFGWLADKETKDEPAAALLVAGADQ 216 Query: 196 YLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVWP-- 253 LAG L ++ N+ I ++ K WQ +R + S RI G R V GP P Sbjct: 217 ILAGVGLHTICRQWNDLGIASAMGKKWQKPVLRNIYLSPRIVGYR-----VYGPTSVPLE 271 Query: 254 -AIITPAERDRVLAR------------MAARSVTKSRTARTYXXXXXXXXXXXXXXXYSQ 300 + A+ V + + A+ SR ++ + Sbjct: 272 KRYVVDADGQPVKGQQQPILDLDVWEAVVAKLRDPSRVSKHVHIGGRKYLLSGIICCGFR 331 Query: 301 ARH---SNPQNRVRRYVCLKGPDHGGCGRLTVVAAPVEELLTEAVLTRLDSXXXXXXXXX 357 RH + + + K GGCG++ V V++L++E VL L Sbjct: 332 GRHLMGGYDRRWGKHHYACKAVTAGGCGKVGVTGRHVDDLVSELVLAYL--------AGR 383 Query: 358 XXXXXXXXXXXXXXXXXXQGRLDELAGLYADGAITAREWIAARDPITERITAARRDIAAV 417 + ++ +L G Y + + R+ + I + Sbjct: 384 DVEAEVGRWPRAGELAKAEAKIAKLMGAYDRDELPG-------PYVFPRVREQEQSILHL 436 Query: 418 TDTTAVFELVGTGGA---LRTEWDGLDLGRQQAIIKAVLDHAVIAPGTPGARRLDIDRVA 474 A + TG L W L+L ++ II V++ V+ R D +RV Sbjct: 437 RAEQAEWLRAHTGPKVTNLAEGWPSLELEQRWEIISTVIEAVVLKAADGPTNRFDPERVE 496 Query: 475 PIWR 478 +WR Sbjct: 497 VVWR 500 >tr|Q0RLN1|Q0RLN1_FRAAA Tax_Id=326424 SubName: Full=Putative uncharacterized protein;[Frankia alni] Length = 502 Score = 113 bits (282), Expect = 6e-23 Identities = 89/266 (33%), Positives = 127/266 (47%), Gaps = 8/266 (3%) Query: 16 AAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYV--DNDVSAFSGKPRRE-YA 72 AAIY RIS + GV RQ CRK AE G V E+V DN+ SA+S +R + Sbjct: 37 AAIYCRISHTADEDQTGVDRQEVICRKTAEHLGLVVAPEHVLVDNNRSAWSRSRKRPGWD 96 Query: 73 RMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLF 132 ML + + +I Y+ DRL R+P +LE + L + + V DL + D F Sbjct: 97 TMLELVRRREVRHLIAYHPDRLMRQPKDLEALLDLADEWEIT-VHGQANRRDLSDPDDRF 155 Query: 133 MARIFAAFAAKESGRKSARIRRKMLQNAQAGLPH-GSARPFGYEADKITVRESEAAVVRE 191 R+ A A + S S R+ A LP G R FGY + +T+ +EA +V E Sbjct: 156 FLRLEVAHACRTSDDTSRRMADDRADRAHDRLPRAGGPRRFGYSPNGLTLVPAEATIVEE 215 Query: 192 MVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAV 251 + Y+ G S + LN+ +W +A+R++L + +AG+ RGE IG Sbjct: 216 VFAAYIDGMSPYKIARMLNDRGSRRVRGGAWSATAIREMLDNPYVAGIHMFRGEEIGDGA 275 Query: 252 WPAIITPAERDRVLARMAARSVTKSR 277 WPAII D V AR+V +R Sbjct: 276 WPAIIDRGMWDEV---RQARTVRAAR 298 >tr|C7N813|C7N813_SLAHD Tax_Id=471855 SubName: Full=Site-specific recombinase, DNA invertase Pin;[Slackia heliotrinireducens] Length = 539 Score = 113 bits (282), Expect = 6e-23 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 13/202 (6%) Query: 15 SAAIYARISSDVEGTGLGVARQLEDCRKLAEDRGWPVG----------AEYVDNDVSAFS 64 + AIY RIS D + GL + RQ EDC + A +RGW + YVD SA Sbjct: 10 TCAIYLRISLDRKMDGLAIERQCEDCERRARERGWDIHIPEPSKPSPYCHYVDQSKSATD 69 Query: 65 GKPRR-EYARMLADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADI 123 RR Y R++AD +G DA++ ++LDRL R+P +LE+++ E G+ + TV+ + Sbjct: 70 KTKRRPAYDRLVADYKAGRFDAIVCWDLDRLTRQPRQLEDWIDEAEDHGL-VLLTVSESV 128 Query: 124 DLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRE 183 DL ++G AR+ AA A E R R R ++Q+A G R +GY D +V E Sbjct: 129 DLSTENGRMFARVKAAVARAEVERMGQRRHRALVQHAALGKIPTGPRLYGYNWDG-SVNE 187 Query: 184 SEAAVVREMVDRYLAGQSLRSL 205 EA +VR + R+L G +++++ Sbjct: 188 YEAEIVRTIYRRFLGGVAVKTM 209 >tr|Q2JG12|Q2JG12_FRASC Tax_Id=106370 SubName: Full=Recombinase;[Frankia sp.] Length = 522 Score = 107 bits (268), Expect = 3e-21 Identities = 129/513 (25%), Positives = 202/513 (39%), Gaps = 78/513 (15%) Query: 19 YARISSDVEGTGLGVARQLEDCRKLAEDRGWPVGAEYV-DNDVSAFSGKPRREYARMLAD 77 Y RIS D EG GV RQ ED R+LAE R + + DND+SA R E+ R+L Sbjct: 29 YRRISDDREGLEAGVTRQDEDIRELAERRDDVDLIDVLTDNDLSATKDY-RPEFERILTM 87 Query: 78 LASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMARIF 137 +G DAVI + +R R + + L ++ VR + +D + DG MA I Sbjct: 88 AQAGQIDAVIAWTSNRFLRNRPDRMRVIELFKARNVRLIPVRGTTMDFTSADGRMMADII 147 Query: 138 AAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGY------------EADKITVRESE 185 + A E+ R + R+ R Q A+ G HG R +GY D + E Sbjct: 148 FSIDAGEAERTAERVARAAQQRAEQGRHHGGPRAYGYGPIVGTDHAGKPVRDFYALVPDE 207 Query: 186 AAVVREMVDRYLAGQSLRSLTIWLNESQITPSVAKS------------------------ 221 AAV+R + LAG L ++ LN ++ P+V K+ Sbjct: 208 AAVIRRIAANILAGVPLAAIARTLN-AEAVPTVTKAHRPICPNNVKGRRAWTDCPCPYRG 266 Query: 222 WQTSAVRQVLSSGRIAGLREHRGE----------VIGPAVWPAIITPAERDRVLARMAAR 271 W + +++++ + R+ G+R ++ V+G AVWPAI+ +++ R Sbjct: 267 WNATTLKEMMVNPRLIGMRGYQTRSTRRSTGTIAVMGQAVWPAILDVDTWEQI------R 320 Query: 272 SVTKSRTARTYXXXXXXXXXXXXXXXYSQARH---SNPQNRVRRYVCLKGPDHGGC-GRL 327 ++ + RT + H N N R Y C + G C ++ Sbjct: 321 AILTDASRRTNTNAQKLRRMLAGFVYCASCGHKLTGNGTNGTRLY-CQR--RDGRCPAKV 377 Query: 328 TVVAAPVEELLTEAVLTRLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRLDELAGLYA 387 + A + L++ AV RLD + R LA +A Sbjct: 378 RIGEAFLVGLVSRAVRGRLDE--------LVLQPVAMDDPAAAELATLEARKSALADRWA 429 Query: 388 DGAITAREWIAARDPITERITAARRDIAAVTDTTAVFELVGTGGALRTEWDGL--DLGRQ 445 G + + A I +I AA + A + G G WDGL D+ + Sbjct: 430 SGKMDDDAYDDAHKAIVRQIRAAEARMHTSARRRATLPVEGAVG-----WDGLGEDIAAK 484 Query: 446 QAIIKAVLDHAVIAPGTPGARRLDIDRVAPIWR 478 + I+ ++D VI G D+ RV +WR Sbjct: 485 RVILTQLID-GVIVGGNGTVEGDDVQRVRIVWR 516 >tr|Q9ZBZ3|Q9ZBZ3_STRCO Tax_Id=1902 SubName: Full=Putative integrase /recombinase;[Streptomyces coelicolor] Length = 495 Score = 107 bits (266), Expect = 4e-21 Identities = 85/268 (31%), Positives = 123/268 (45%), Gaps = 15/268 (5%) Query: 19 YARISSDVEGTGL-GVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKP-RREYARMLA 76 YARIS D G+ Q D + A GW + Y DND SA R ++ ++LA Sbjct: 14 YARISFDGRVKDAHGIEDQHRDMSEAARRFGWLIVYRYTDNDKSASKESVVRDDFEQLLA 73 Query: 77 DLASGDRD------AVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDG 130 DLA+G V+ N DRL+RRP + E ++ S R DL + Sbjct: 74 DLAAGATPEGYPVHGVMAVNDDRLYRRPSDWERYLKAFTSQDGRVYHDSNGLQDLYAEGF 133 Query: 131 LFMARIFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADKITVRESEAAVVR 190 + A + E+ +K R R A G + RPFG+E DK+T+R EA +R Sbjct: 134 EIKGLVGVAMSLSETRKKQRRSRNSHRSRAIRGQSVSAWRPFGWEDDKVTLRPDEAEAIR 193 Query: 191 EMVDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVI--- 247 V +AG S+ +T E+ S +Q V+QVL + R+ G RE +GE++ Sbjct: 194 TAVHDVIAGASISEITRRWKEAGFITSRGNPFQYQTVKQVLVNARLCGYREIKGEIVRDG 253 Query: 248 --GPAV--WPAIITPAERDRVLARMAAR 271 P V W AI+TP + V A++ R Sbjct: 254 DDQPIVGEWEAIVTPKQWFAVTAKIRER 281 >tr|C9S0X0|C9S0X0_GEOSY Tax_Id=544556 SubName: Full=Resolvase domain protein;[Geobacillus sp.] Length = 462 Score = 105 bits (261), Expect = 2e-20 Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 7/268 (2%) Query: 17 AIYARISSDVEGT-GLGVARQLEDCRKLAEDRGWPVGAEYVDNDVSAFSGKPRREYARML 75 AIY R+S+D + G + Q E R +GW + EY++ SA R + R+L Sbjct: 4 AIYVRVSTDEQAKEGFSIPAQRERLRAFCASQGWEIVQEYIEEGWSA-KDLDRPQMQRLL 62 Query: 76 ADLASGDRDAVIVYNLDRLHRRPVELEEFVTLCESVGVRDVATVTADIDLGNDDGLFMAR 135 D+ G+ D V+VY LDRL R ++L + E V + T D G Sbjct: 63 KDIKKGNIDIVLVYRLDRLTRSVLDLYLLLQTFEKYNVA-FRSATEVYDTSTAMGRLFIT 121 Query: 136 IFAAFAAKESGRKSARIRRKMLQNAQAGLPHGSARPFGYEADK---ITVRESEAAVVREM 192 + AA A E + R++ + Q G G P+GY+ DK T+ E EA VVR + Sbjct: 122 LVAALAQWERENLAERVKFGIEQMIDEGKKPGGHSPYGYKFDKDFNCTIIEEEADVVRMI 181 Query: 193 VDRYLAGQSLRSLTIWLNESQITPSVAKSWQTSAVRQVLSSGRIAGLREHRGEVIGPAVW 252 Y G RS+ LNE + P +AK W ++VR +L++ G G+ + P Sbjct: 182 YRMYCDGYGYRSIADRLNELMVKPRIAKEWNHNSVRDILTNDIYIGTYRW-GDKVVPNNH 240 Query: 253 PAIITPAERDRVLARMAARSVTKSRTAR 280 P II+ + R V + R + Sbjct: 241 PPIISETLFKKAQKEKEKRGVDRKRVGK 268 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,099,772,357 Number of extensions: 115198924 Number of successful extensions: 294314 Number of sequences better than 10.0: 1765 Number of HSP's gapped: 295011 Number of HSP's successfully gapped: 1772 Length of query: 479 Length of database: 3,846,993,858 Length adjustment: 141 Effective length of query: 338 Effective length of database: 2,257,190,235 Effective search space: 762930299430 Effective search space used: 762930299430 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 82 (36.2 bits)