BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_2171
         (170 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|A0PPG7|RUVX_MYCUA Tax_Id=362242 RecName: Full=Putative Hollid...   325   1e-87
sp|B2HNC2|RUVX_MYCMM Tax_Id=216594 RecName: Full=Putative Hollid...   325   1e-87
sp|Q741L2|RUVX_MYCPA Tax_Id=1770 RecName: Full=Putative Holliday...   244   2e-63
tr|A0QI74|A0QI74_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...   243   5e-63
sp|P67487|RUVX_MYCTU Tax_Id=1773 RecName: Full=Putative Holliday...   243   7e-63
sp|A5U5Q4|RUVX_MYCTA Tax_Id=419947 RecName: Full=Putative Hollid...   243   7e-63
sp|C1AF23|RUVX_MYCBT Tax_Id=561275 RecName: Full=Putative Hollid...   243   7e-63
sp|A1KLQ2|RUVX_MYCBP Tax_Id=410289 RecName: Full=Putative Hollid...   243   7e-63
sp|P67488|RUVX_MYCBO Tax_Id=1765 RecName: Full=Putative Holliday...   243   7e-63
tr|C6DME1|C6DME1_MYCTK Tax_Id=478434 SubName: Full=Putative unch...   243   7e-63
tr|A5WQG3|A5WQG3_MYCTF Tax_Id=336982 SubName: Full=Putative unch...   243   7e-63
tr|A4KNY0|A4KNY0_MYCTU Tax_Id=395095 SubName: Full=Putative unch...   243   7e-63
tr|A2VKR4|A2VKR4_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   243   7e-63
tr|A4TBW3|A4TBW3_MYCGI Tax_Id=350054 SubName: Full=Holliday junc...   228   1e-58
sp|Q1B9H9|RUVX_MYCSS Tax_Id=164756 RecName: Full=Putative Hollid...   228   2e-58
sp|A1UFI4|RUVX_MYCSK Tax_Id=189918 RecName: Full=Putative Hollid...   228   2e-58
sp|A3PZ45|RUVX_MYCSJ Tax_Id=164757 RecName: Full=Putative Hollid...   227   4e-58
sp|A0QWQ5|RUVX_MYCS2 Tax_Id=246196 RecName: Full=Putative Hollid...   225   2e-57
tr|A1T8E9|A1T8E9_MYCVP Tax_Id=350058 SubName: Full=Holliday junc...   222   1e-56
sp|Q9CCS9|RUVX_MYCLE Tax_Id=1769 RecName: Full=Putative Holliday...   215   2e-54
sp|B8ZUJ7|RUVX_MYCLB Tax_Id=561304 RecName: Full=Putative Hollid...   215   2e-54
sp|B1MCF8|RUVX_MYCA9 Tax_Id=561007 RecName: Full=Putative Hollid...   191   2e-47
sp|Q0S0N6|RUVX_RHOSR Tax_Id=101510 RecName: Full=Putative Hollid...   177   3e-43
sp|C1B4H5|RUVX_RHOOB Tax_Id=632772 RecName: Full=Putative Hollid...   177   4e-43
sp|C0ZZA9|RUVX_RHOE4 Tax_Id=234621 RecName: Full=Putative Hollid...   172   2e-41
tr|C3JSR8|C3JSR8_RHOER Tax_Id=596309 SubName: Full=Putative unch...   172   2e-41
sp|Q5YTK0|RUVX_NOCFA Tax_Id=37329 RecName: Full=Putative Hollida...   169   1e-40
tr|D0LCP5|D0LCP5_GORB4 Tax_Id=526226 SubName: Full=Holliday junc...   164   3e-39
tr|C4ELQ4|C4ELQ4_STRRS Tax_Id=479432 SubName: Full=Putative unch...   162   2e-38
tr|C6W913|C6W913_ACTMD Tax_Id=446462 SubName: Full=Holliday junc...   161   2e-38
tr|C7MSG5|C7MSG5_SACVD Tax_Id=471857 SubName: Full=Putative unch...   158   2e-37
tr|C8NUE0|C8NUE0_9CORY Tax_Id=585529 SubName: Full=Holliday junc...   155   1e-36
tr|C0UA40|C0UA40_9ACTO Tax_Id=526225 SubName: Full=Putative unch...   147   4e-34
sp|C4LIV4|RUVX_CORK4 Tax_Id=645127 RecName: Full=Putative Hollid...   146   7e-34
tr|A8LXY9|A8LXY9_SALAI Tax_Id=391037 SubName: Full=Holliday junc...   146   9e-34
tr|B5HGT0|B5HGT0_STRPR Tax_Id=457429 SubName: Full=Putative unch...   145   2e-33
tr|A8LCW5|A8LCW5_FRASN Tax_Id=298653 SubName: Full=Holliday junc...   144   3e-33
sp|Q2J822|RUVX_FRASC Tax_Id=106370 RecName: Full=Putative Hollid...   144   4e-33
sp|Q9KXQ0|RUVX_STRCO Tax_Id=1902 RecName: Full=Putative Holliday...   143   6e-33
sp|Q827S3|RUVX_STRAW Tax_Id=33903 RecName: Full=Putative Hollida...   142   1e-32
tr|C4RHN0|C4RHN0_9ACTO Tax_Id=219305 SubName: Full=Holliday junc...   142   1e-32
tr|A4X5Z1|A4X5Z1_SALTO Tax_Id=369723 SubName: Full=Holliday junc...   142   1e-32
tr|Q0RF66|Q0RF66_FRAAA Tax_Id=326424 SubName: Full=Putative unch...   141   2e-32
tr|C9NI22|C9NI22_9ACTO Tax_Id=591167 SubName: Full=Holliday junc...   141   3e-32
tr|A0LUJ1|A0LUJ1_ACIC1 Tax_Id=351607 SubName: Full=Holliday junc...   140   5e-32
tr|C9Z660|C9Z660_STRSW Tax_Id=680198 (ruvX)SubName: Full=Putativ...   140   6e-32
tr|C7PVQ5|C7PVQ5_CATAD Tax_Id=479433 SubName: Full=Holliday junc...   139   1e-31
sp|C3PGN1|RUVX_CORA7 Tax_Id=548476 RecName: Full=Putative Hollid...   139   1e-31
tr|D1AEX7|D1AEX7_THECU Tax_Id=471852 SubName: Full=Holliday junc...   139   1e-31
tr|C0XSS3|C0XSS3_9CORY Tax_Id=525263 SubName: Full=Holliday junc...   138   2e-31

>sp|A0PPG7|RUVX_MYCUA Tax_Id=362242 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium ulcerans]
          Length = 170

 Score =  325 bits (832), Expect = 1e-87
 Identities = 169/170 (99%), Positives = 170/170 (100%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +VAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS
Sbjct: 1   MVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER
Sbjct: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG
Sbjct: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170


>sp|B2HNC2|RUVX_MYCMM Tax_Id=216594 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium marinum]
          Length = 170

 Score =  325 bits (832), Expect = 1e-87
 Identities = 169/170 (99%), Positives = 170/170 (100%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +VAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS
Sbjct: 1   MVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER
Sbjct: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG
Sbjct: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170


>sp|Q741L2|RUVX_MYCPA Tax_Id=1770 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           paratuberculosis]
          Length = 167

 Score =  244 bits (624), Expect = 2e-63
 Identities = 129/170 (75%), Positives = 141/170 (82%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V   HR PDRPGDP+      GRGRRLGIDVG+VRIGVA SDPD +LATP+ETVRR+RS
Sbjct: 1   MVLTQHRVPDRPGDPD---QDPGRGRRLGIDVGSVRIGVACSDPDAVLATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA LV E  AVEV+VGLPRTLADR G+SA DAIDLAD+LA R+AP PVRLADER
Sbjct: 58  GKHLRRLAALVTELGAVEVVVGLPRTLADRTGTSALDAIDLADQLARRIAPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTV+AQRSLR AGVRAK QRAVIDQAAAVAILQ+WLDQRR       DG
Sbjct: 118 LTTVAAQRSLRAAGVRAKEQRAVIDQAAAVAILQSWLDQRRAATREAGDG 167


>tr|A0QI74|A0QI74_MYCA1 Tax_Id=243243 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 165

 Score =  243 bits (620), Expect = 5e-63
 Identities = 128/165 (77%), Positives = 139/165 (84%), Gaps = 3/165 (1%)

Query: 6   HRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLR 65
           HR PDRPGDP+      GRGRRLGIDVG+VRIGVA SDPD +LATP+ETVRR+RSGKHLR
Sbjct: 4   HRVPDRPGDPD---QDPGRGRRLGIDVGSVRIGVACSDPDAVLATPVETVRRDRSGKHLR 60

Query: 66  RLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVS 125
           RLA LV E  AVEV+VGLPRTLADR G+SA DAIDLAD+LA R+AP PVRLADERLTTV+
Sbjct: 61  RLAALVTELGAVEVVVGLPRTLADRTGASALDAIDLADQLARRIAPTPVRLADERLTTVA 120

Query: 126 AQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           AQRSLR AGVRAK QRAVIDQAAAVAILQ+WLDQRR       DG
Sbjct: 121 AQRSLRAAGVRAKEQRAVIDQAAAVAILQSWLDQRRAAVREAGDG 165


>sp|P67487|RUVX_MYCTU Tax_Id=1773 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>sp|A5U5Q4|RUVX_MYCTA Tax_Id=419947 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium
           tuberculosis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>sp|C1AF23|RUVX_MYCBT Tax_Id=561275 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>sp|A1KLQ2|RUVX_MYCBP Tax_Id=410289 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>sp|P67488|RUVX_MYCBO Tax_Id=1765 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium bovis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>tr|C6DME1|C6DME1_MYCTK Tax_Id=478434 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>tr|A5WQG3|A5WQG3_MYCTF Tax_Id=336982 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>tr|A4KNY0|A4KNY0_MYCTU Tax_Id=395095 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>tr|A2VKR4|A2VKR4_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 170

 Score =  243 bits (619), Expect = 7e-63
 Identities = 129/170 (75%), Positives = 139/170 (81%), Gaps = 3/170 (1%)

Query: 1   VVAASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS 60
           +V A HR PDRPGDP       GRGRRLGIDVG  RIGVA SDPD ILATP+ETVRR+RS
Sbjct: 1   MVPAQHRPPDRPGDPAH---DPGRGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRS 57

Query: 61  GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADER 120
           GKHLRRLA L  E EAVEVIVGLPRTLADRIG SAQDAI+LA+ LA RV+P PVRLADER
Sbjct: 58  GKHLRRLAALAAELEAVEVIVGLPRTLADRIGRSAQDAIELAEALARRVSPTPVRLADER 117

Query: 121 LTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           LTTVSAQRSLR+AGVRA  QRAVIDQAAAVAILQ+WLD+R     G  +G
Sbjct: 118 LTTVSAQRSLRQAGVRASEQRAVIDQAAAVAILQSWLDERLAAMAGTQEG 167


>tr|A4TBW3|A4TBW3_MYCGI Tax_Id=350054 SubName: Full=Holliday
           junction resolvase YqgF;[Mycobacterium gilvum]
          Length = 175

 Score =  228 bits (582), Expect = 1e-58
 Identities = 117/156 (75%), Positives = 135/156 (86%), Gaps = 2/156 (1%)

Query: 7   RSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER-SGKHLR 65
           R PDRPGDP    P  GRGRRLGIDVG+VRIGVA SDPD +LATP+ETV R+R SG+HLR
Sbjct: 9   RVPDRPGDPNAA-PDPGRGRRLGIDVGSVRIGVAVSDPDAVLATPVETVTRDRRSGRHLR 67

Query: 66  RLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVS 125
           RL TLVGE EAVEV++GLPRTL +R GSSAQDA ++AD+LAAR+AP+PVRLADER TTV+
Sbjct: 68  RLTTLVGEYEAVEVVIGLPRTLGNRAGSSAQDATEVADQLAARIAPVPVRLADERFTTVT 127

Query: 126 AQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRR 161
           AQR LREAGVRA+ Q+++IDQAAAV ILQ WLDQRR
Sbjct: 128 AQRELREAGVRARGQKSMIDQAAAVGILQNWLDQRR 163


>sp|Q1B9H9|RUVX_MYCSS Tax_Id=164756 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  228 bits (580), Expect = 2e-58
 Identities = 117/168 (69%), Positives = 139/168 (82%), Gaps = 6/168 (3%)

Query: 4   ASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG-K 62
           + HR PDRPG+ +      GRGRR+GIDVG+VR+GVA+SDPDG+LATP+ETVRRE+S  +
Sbjct: 4   SDHRLPDRPGEGD-----PGRGRRIGIDVGSVRVGVATSDPDGVLATPVETVRREKSSDR 58

Query: 63  HLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLT 122
           H+RRLA LV E EAVEV+VGLPRTLADR G +A DAID+A+ LA R+AP+PVR+ADERLT
Sbjct: 59  HVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAHDAIDVAEALARRIAPVPVRMADERLT 118

Query: 123 TVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           TVSAQRSLREAGVRAK QRA+IDQ AAV ILQ+WLDQRR       +G
Sbjct: 119 TVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSWLDQRRAALAAPGEG 166


>sp|A1UFI4|RUVX_MYCSK Tax_Id=189918 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  228 bits (580), Expect = 2e-58
 Identities = 117/168 (69%), Positives = 139/168 (82%), Gaps = 6/168 (3%)

Query: 4   ASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG-K 62
           + HR PDRPG+ +      GRGRR+GIDVG+VR+GVA+SDPDG+LATP+ETVRRE+S  +
Sbjct: 4   SDHRLPDRPGEGD-----PGRGRRIGIDVGSVRVGVATSDPDGVLATPVETVRREKSSDR 58

Query: 63  HLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLT 122
           H+RRLA LV E EAVEV+VGLPRTLADR G +A DAID+A+ LA R+AP+PVR+ADERLT
Sbjct: 59  HVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAHDAIDVAEALARRIAPVPVRMADERLT 118

Query: 123 TVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           TVSAQRSLREAGVRAK QRA+IDQ AAV ILQ+WLDQRR       +G
Sbjct: 119 TVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSWLDQRRAALAAPGEG 166


>sp|A3PZ45|RUVX_MYCSJ Tax_Id=164757 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium sp.]
          Length = 169

 Score =  227 bits (578), Expect = 4e-58
 Identities = 117/168 (69%), Positives = 138/168 (82%), Gaps = 6/168 (3%)

Query: 4   ASHRSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG-K 62
           + HR PDRPG+ +      GRGRR+GIDVG VR+GVA+SDPDG+LATP+ETVRRE+S  +
Sbjct: 4   SDHRLPDRPGEGD-----PGRGRRIGIDVGCVRVGVATSDPDGVLATPVETVRREKSSDR 58

Query: 63  HLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLT 122
           H+RRLA LV E EAVEV+VGLPRTLADR G +A DAID+A+ LA R+AP+PVR+ADERLT
Sbjct: 59  HVRRLAQLVTELEAVEVVVGLPRTLADRTGPAAHDAIDVAEALARRIAPVPVRMADERLT 118

Query: 123 TVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           TVSAQRSLREAGVRAK QRA+IDQ AAV ILQ+WLDQRR       +G
Sbjct: 119 TVSAQRSLREAGVRAKGQRAMIDQVAAVGILQSWLDQRRAALAAPGEG 166


>sp|A0QWQ5|RUVX_MYCS2 Tax_Id=246196 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium smegmatis]
          Length = 170

 Score =  225 bits (573), Expect = 2e-57
 Identities = 119/167 (71%), Positives = 136/167 (81%), Gaps = 8/167 (4%)

Query: 7   RSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETV---RRERSGKH 63
           R PDRPG  +      GRGRR+GIDVGTVRIGVASSDPDGILATP+ETV   +R+++GKH
Sbjct: 6   RLPDRPGADD-----PGRGRRIGIDVGTVRIGVASSDPDGILATPVETVARDKRDKTGKH 60

Query: 64  LRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTT 123
           +RRLA LV E EAVEVIVGLPRTL DR  +SA DA+D+A++LA R+AP PVRLADERLTT
Sbjct: 61  VRRLAALVKEYEAVEVIVGLPRTLGDRASASAHDAVDVAEQLARRIAPTPVRLADERLTT 120

Query: 124 VSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           VSAQRSLREAGVRA+ Q+AVIDQ AAV ILQ WLDQRR     R +G
Sbjct: 121 VSAQRSLREAGVRARGQKAVIDQVAAVGILQGWLDQRRAALAARREG 167


>tr|A1T8E9|A1T8E9_MYCVP Tax_Id=350058 SubName: Full=Holliday
           junction resolvase YqgF;[Mycobacterium vanbaalenii]
          Length = 175

 Score =  222 bits (566), Expect = 1e-56
 Identities = 116/156 (74%), Positives = 132/156 (84%), Gaps = 2/156 (1%)

Query: 7   RSPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG-KHLR 65
           R PDRPGDP    P  GRGRRLG+DVGTVRIGVA SDPD ILATP+ETV R++ G KH+R
Sbjct: 9   RVPDRPGDPN-TAPDPGRGRRLGVDVGTVRIGVAVSDPDAILATPVETVPRDKRGTKHVR 67

Query: 66  RLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVS 125
           RLA LV E + VEV+VGLPRTLADR GSSAQDA ++A+ LA R+AP+PVRLADER TTV+
Sbjct: 68  RLAALVDEYQVVEVVVGLPRTLADRAGSSAQDATEVAEVLAGRIAPVPVRLADERFTTVT 127

Query: 126 AQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRR 161
           AQR+LREAGVRA+ QR+VIDQAAAV ILQ WLDQRR
Sbjct: 128 AQRALREAGVRARGQRSVIDQAAAVGILQNWLDQRR 163


>sp|Q9CCS9|RUVX_MYCLE Tax_Id=1769 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium leprae]
          Length = 184

 Score =  215 bits (547), Expect = 2e-54
 Identities = 120/170 (70%), Positives = 133/170 (78%), Gaps = 5/170 (2%)

Query: 3   AASHRSPDRPGDPE---GLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER 59
           ++ HR   +P  P+    L+P   RGRRLGIDVG+VRIGVA SDPDGILATP+ETVRR R
Sbjct: 3   SSQHRLLYQPSGPDLSKNLDPE--RGRRLGIDVGSVRIGVAFSDPDGILATPVETVRRYR 60

Query: 60  SGKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADE 119
           S KHLRRLA LV E + VEV+VGLP TL DR GSSA+DAID A+ LA RVAP+PVRL DE
Sbjct: 61  SAKHLRRLAELVVELQVVEVVVGLPWTLTDRTGSSAKDAIDTAEALARRVAPVPVRLVDE 120

Query: 120 RLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRAD 169
           RLTTVSAQR LR AGVRAK+QRAVIDQAAAV ILQ WLDQ R     RAD
Sbjct: 121 RLTTVSAQRLLRAAGVRAKDQRAVIDQAAAVVILQNWLDQCRAATPARAD 170


>sp|B8ZUJ7|RUVX_MYCLB Tax_Id=561304 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium leprae]
          Length = 184

 Score =  215 bits (547), Expect = 2e-54
 Identities = 120/170 (70%), Positives = 133/170 (78%), Gaps = 5/170 (2%)

Query: 3   AASHRSPDRPGDPE---GLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER 59
           ++ HR   +P  P+    L+P   RGRRLGIDVG+VRIGVA SDPDGILATP+ETVRR R
Sbjct: 3   SSQHRLLYQPSGPDLSKNLDPE--RGRRLGIDVGSVRIGVAFSDPDGILATPVETVRRYR 60

Query: 60  SGKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADE 119
           S KHLRRLA LV E + VEV+VGLP TL DR GSSA+DAID A+ LA RVAP+PVRL DE
Sbjct: 61  SAKHLRRLAELVVELQVVEVVVGLPWTLTDRTGSSAKDAIDTAEALARRVAPVPVRLVDE 120

Query: 120 RLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRAD 169
           RLTTVSAQR LR AGVRAK+QRAVIDQAAAV ILQ WLDQ R     RAD
Sbjct: 121 RLTTVSAQRLLRAAGVRAKDQRAVIDQAAAVVILQNWLDQCRAATPARAD 170


>sp|B1MCF8|RUVX_MYCA9 Tax_Id=561007 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Mycobacterium abscessus]
          Length = 166

 Score =  191 bits (485), Expect = 2e-47
 Identities = 100/155 (64%), Positives = 119/155 (76%), Gaps = 6/155 (3%)

Query: 8   SPDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRE-RSGKHLRR 66
           +PDRPG  +      GRGRRLG+DVGTVRIG++SSDPDGILATP+ETV R+ +     RR
Sbjct: 8   TPDRPGPDD-----PGRGRRLGVDVGTVRIGISSSDPDGILATPVETVSRDAKEDSDFRR 62

Query: 67  LATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSA 126
           +A LV E   VEV+VGLPR L +  GSSA+DA   A EL  R+AP+PVRL DER TT +A
Sbjct: 63  IAELVEEMSVVEVVVGLPRNLREGTGSSARDAAGFARELGERIAPVPVRLVDERFTTTTA 122

Query: 127 QRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRR 161
           QRSLREAGVR++ QR +IDQAAAVAILQ WL+QRR
Sbjct: 123 QRSLREAGVRSRQQRGIIDQAAAVAILQDWLEQRR 157


>sp|Q0S0N6|RUVX_RHOSR Tax_Id=101510 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus sp.]
          Length = 178

 Score =  177 bits (450), Expect = 3e-43
 Identities = 103/173 (59%), Positives = 124/173 (71%), Gaps = 14/173 (8%)

Query: 5   SHRSPDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS-- 60
           + + PDRPG  DP       GRGRR+GIDVG+VRIGVASSDPDGILATP+ETV R +   
Sbjct: 4   AEQGPDRPGVDDP-------GRGRRIGIDVGSVRIGVASSDPDGILATPVETVPRSKERG 56

Query: 61  --GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLAD 118
                +RR+A +V E EAVEVIVGLP+TL    G +A  A   A  L  +V PIPVR+AD
Sbjct: 57  PDAPDIRRIADIVEEYEAVEVIVGLPQTLRGERGKAASIATVFAKRLRRKVDPIPVRMAD 116

Query: 119 ERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR-RTLAGGRADG 170
           ERLTTV+A R+LRE+GV A+ QR VIDQAAAVAILQ WLD+R R++  G + G
Sbjct: 117 ERLTTVTAARALRESGVSARGQRPVIDQAAAVAILQGWLDERSRSVNAGDSGG 169


>sp|C1B4H5|RUVX_RHOOB Tax_Id=632772 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus opacus]
          Length = 178

 Score =  177 bits (449), Expect = 4e-43
 Identities = 103/173 (59%), Positives = 123/173 (71%), Gaps = 14/173 (8%)

Query: 5   SHRSPDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS-- 60
           + + PDRPG  DP       GRGRR+GIDVG+VRIGVASSDPDGILATP+ETV R +   
Sbjct: 4   AEQGPDRPGVDDP-------GRGRRIGIDVGSVRIGVASSDPDGILATPVETVPRSKDRG 56

Query: 61  --GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLAD 118
                +RR+A +V E EAVEVIVGLP+TL    G +A  A   A  L  +V PIPVR+AD
Sbjct: 57  PDAPDIRRIADIVEEYEAVEVIVGLPQTLRGERGKAASIATVFAKRLRRKVDPIPVRMAD 116

Query: 119 ERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR-RTLAGGRADG 170
           ERLTTV+A R+LRE+GV A+ QR VIDQAAAVAILQ WLD+R R++  G   G
Sbjct: 117 ERLTTVTAARALRESGVSARGQRPVIDQAAAVAILQGWLDERSRSVNAGDVGG 169


>sp|C0ZZA9|RUVX_RHOE4 Tax_Id=234621 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Rhodococcus
           erythropolis]
          Length = 177

 Score =  172 bits (435), Expect = 2e-41
 Identities = 97/165 (58%), Positives = 117/165 (70%), Gaps = 13/165 (7%)

Query: 2   VAASHRSPDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER 59
           + A+ + PDRPG  DP       GRGRR+ IDVG+VRIGVASSDPDGILATP+ETV R +
Sbjct: 1   MVATQQGPDRPGIDDP-------GRGRRIAIDVGSVRIGVASSDPDGILATPVETVPRSK 53

Query: 60  S----GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVR 115
                   +RR+  +V E EAVEVIVGLP+TL    G +A  A   A  L   V PIPVR
Sbjct: 54  ERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAAGIATAFAKRLQRAVEPIPVR 113

Query: 116 LADERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
           L+DERLTTV+A R+LRE+GV+A+ QR +IDQAAAV ILQ WLD+R
Sbjct: 114 LSDERLTTVTAARNLRESGVKARGQRPMIDQAAAVEILQGWLDER 158


>tr|C3JSR8|C3JSR8_RHOER Tax_Id=596309 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus erythropolis SK121]
          Length = 177

 Score =  172 bits (435), Expect = 2e-41
 Identities = 97/165 (58%), Positives = 117/165 (70%), Gaps = 13/165 (7%)

Query: 2   VAASHRSPDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER 59
           + A+ + PDRPG  DP       GRGRR+ IDVG+VRIGVASSDPDGILATP+ETV R +
Sbjct: 1   MVATQQGPDRPGIDDP-------GRGRRIAIDVGSVRIGVASSDPDGILATPVETVPRSK 53

Query: 60  S----GKHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVR 115
                   +RR+  +V E EAVEVIVGLP+TL    G +A  A   A  L   V PIPVR
Sbjct: 54  ERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAAGIATAFAKRLQRAVEPIPVR 113

Query: 116 LADERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
           L+DERLTTV+A R+LRE+GV+A+ QR +IDQAAAV ILQ WLD+R
Sbjct: 114 LSDERLTTVTAARNLRESGVKARGQRPMIDQAAAVEILQGWLDER 158


>sp|Q5YTK0|RUVX_NOCFA Tax_Id=37329 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Nocardia farcinica]
          Length = 180

 Score =  169 bits (427), Expect = 1e-40
 Identities = 95/158 (60%), Positives = 113/158 (71%), Gaps = 13/158 (8%)

Query: 9   PDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS------GK 62
           PD   DP       GRGRRLGIDVG+VRIGVASSDPDGILATP+ETV R +         
Sbjct: 10  PDPATDP-------GRGRRLGIDVGSVRIGVASSDPDGILATPVETVPRAKKVPRGTVSP 62

Query: 63  HLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLT 122
            + R+A +V E EAVEVIVGLPRTL    GS+A  AI  A+ L   +  + +RL+DERLT
Sbjct: 63  DIARIAEIVREYEAVEVIVGLPRTLRGEKGSAATAAIAFAERLRREIPDVAIRLSDERLT 122

Query: 123 TVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
           TVSA R+LR++GVRA+ QR VIDQAAAV+ILQ WLD+R
Sbjct: 123 TVSAARALRDSGVRARGQRQVIDQAAAVSILQGWLDER 160


>tr|D0LCP5|D0LCP5_GORB4 Tax_Id=526226 SubName: Full=Holliday
           junction resolvase YqgF;[Gordonia bronchialis]
          Length = 143

 Score =  164 bits (415), Expect = 3e-39
 Identities = 87/139 (62%), Positives = 107/139 (76%), Gaps = 1/139 (0%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRE-RSGKHLRRLATLVGETEAVEVIVG 82
           RGRRLG+DVG+VRIGVA  DPDGILATP+ETV R   +   + R+ATLV E +A EVIVG
Sbjct: 5   RGRRLGVDVGSVRIGVAVCDPDGILATPVETVARTPHNDDDIERIATLVDEYDAAEVIVG 64

Query: 83  LPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRA 142
           LP+TL +  G++A+ A D  D LAAR+AP+ V   DERLTTV+A +++R +G  AK+ RA
Sbjct: 65  LPKTLRNEAGAAAEAARDFGDRLAARIAPVGVSYHDERLTTVTAHQAMRASGRNAKSSRA 124

Query: 143 VIDQAAAVAILQAWLDQRR 161
           VIDQAAAVAILQ WLD RR
Sbjct: 125 VIDQAAAVAILQGWLDARR 143


>tr|C4ELQ4|C4ELQ4_STRRS Tax_Id=479432 SubName: Full=Putative
           uncharacterized protein;[Streptosporangium roseum DSM
           43021]
          Length = 163

 Score =  162 bits (409), Expect = 2e-38
 Identities = 89/146 (60%), Positives = 110/146 (75%), Gaps = 4/146 (2%)

Query: 25  GRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGLP 84
           G RLG+DVG+VRIGVA SDP G+LATP+ETVRR R    L RLA +  E E VE++VGLP
Sbjct: 6   GIRLGVDVGSVRIGVARSDPSGLLATPVETVRRGRGD--LDRLAEIAAEYEVVEIVVGLP 63

Query: 85  RTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAVI 144
            +L+ R G +A+ A D A  ++ R+APIPVRL DERLTTV+AQ+ LR +GV+AKNQRAV+
Sbjct: 64  TSLSGREGQAAEAARDFATRISLRLAPIPVRLFDERLTTVTAQQGLRASGVKAKNQRAVV 123

Query: 145 DQAAAVAILQAWLDQRRTLAGGRADG 170
           DQAAA+ +LQA LD  R  A GR  G
Sbjct: 124 DQAAAIVLLQAALDAER--ATGRPPG 147


>tr|C6W913|C6W913_ACTMD Tax_Id=446462 SubName: Full=Holliday
           junction resolvase YqgF;[Actinosynnema mirum]
          Length = 170

 Score =  161 bits (408), Expect = 2e-38
 Identities = 90/149 (60%), Positives = 107/149 (71%), Gaps = 2/149 (1%)

Query: 13  GDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRR-ERSGKHLRRLATLV 71
           GD  G++   G GRRLG+DVG VR+GVA SDP   LATPL T+ R E++G+ L  L  L 
Sbjct: 4   GDTPGVDD-PGLGRRLGVDVGAVRVGVALSDPGAFLATPLVTLSRDEKNGRDLDDLVGLA 62

Query: 72  GETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLR 131
            E + VEV+VGLPRTLA + G +AQ A   A  LA RVAP+PVRL DERLTTV+A R L 
Sbjct: 63  AEHDVVEVVVGLPRTLAGKHGPAAQAATAYAAALAERVAPLPVRLTDERLTTVTASRVLA 122

Query: 132 EAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
           + GVR K QRAV+DQAAAV ILQ+WLD R
Sbjct: 123 QRGVRGKKQRAVVDQAAAVEILQSWLDAR 151


>tr|C7MSG5|C7MSG5_SACVD Tax_Id=471857 SubName: Full=Putative
           uncharacterized protein;[Saccharomonospora viridis]
          Length = 154

 Score =  158 bits (400), Expect = 2e-37
 Identities = 86/139 (61%), Positives = 104/139 (74%), Gaps = 1/139 (0%)

Query: 23  GRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRER-SGKHLRRLATLVGETEAVEVIV 81
           G GRRL +DVG+VR+GVA SDP  ILA+PL T+ R+  + K L  LA LV E + VEVIV
Sbjct: 5   GPGRRLAVDVGSVRVGVALSDPTPILASPLVTLSRDADTDKDLEELARLVAEHDVVEVIV 64

Query: 82  GLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQR 141
           GLPRTLADR G++A  A D A  LA R++P+ VRLADERL+TVSA R L + GV+ + QR
Sbjct: 65  GLPRTLADRHGTAAAIAADYARRLAERISPVAVRLADERLSTVSASRMLSQRGVKGRKQR 124

Query: 142 AVIDQAAAVAILQAWLDQR 160
           AV+DQAAAV  LQAWLD R
Sbjct: 125 AVVDQAAAVEFLQAWLDAR 143


>tr|C8NUE0|C8NUE0_9CORY Tax_Id=585529 SubName: Full=Holliday
           junction resolvase; EC=3.1.-.-;[Corynebacterium
           genitalium ATCC 33030]
          Length = 167

 Score =  155 bits (392), Expect = 1e-36
 Identities = 90/159 (56%), Positives = 109/159 (68%), Gaps = 14/159 (8%)

Query: 9   PDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRR-----ERSG 61
           PD PG  DP       G GRR+GIDVGTVRIGVASSD DG+LATP+ETV R     +R G
Sbjct: 5   PDTPGVDDP-------GPGRRIGIDVGTVRIGVASSDRDGLLATPVETVERVTGFKDRDG 57

Query: 62  KHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERL 121
             + RL  ++ E +AVEV+VGLPR L     SS + A ++A  +  R   +PVR ADERL
Sbjct: 58  ADIDRLLDIISEYDAVEVVVGLPRDLKGNGSSSVKHAKEIAFRIGRRNPDVPVRFADERL 117

Query: 122 TTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
           TTV A  +LR +GV A++ RAVIDQAAAVAILQ+WLD R
Sbjct: 118 TTVEATNALRLSGVNARDGRAVIDQAAAVAILQSWLDGR 156


>tr|C0UA40|C0UA40_9ACTO Tax_Id=526225 SubName: Full=Putative
           uncharacterized protein;[Geodermatophilus obscurus DSM
           43160]
          Length = 222

 Score =  147 bits (371), Expect = 4e-34
 Identities = 81/138 (58%), Positives = 100/138 (72%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGL 83
           +GRRLGIDVGTVR+GVA SDP G LA+PLETV+R R    L R+A LV E E  EVIVG 
Sbjct: 82  QGRRLGIDVGTVRVGVAISDPTGTLASPLETVQRARDESDLDRIAALVVEHEVTEVIVGE 141

Query: 84  PRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAV 143
           PR L+   G+SA++A   +  LA R+  +PV L DERL+TV+A  SLR  G+ ++ QR V
Sbjct: 142 PRHLSGASGASAKEARAYSRALAGRIGSVPVHLVDERLSTVTAASSLRANGLDSRRQRPV 201

Query: 144 IDQAAAVAILQAWLDQRR 161
           IDQAAAV ILQA+LD +R
Sbjct: 202 IDQAAAVVILQAYLDAQR 219


>sp|C4LIV4|RUVX_CORK4 Tax_Id=645127 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Corynebacterium
           kroppenstedtii]
          Length = 164

 Score =  146 bits (369), Expect = 7e-34
 Identities = 84/162 (51%), Positives = 104/162 (64%), Gaps = 14/162 (8%)

Query: 9   PDRPGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETV-----RRERSGKH 63
           PDRPG+ +      G GRRLG+DVGTVRIGVA SDPDGILATP+ TV     RR   G+ 
Sbjct: 6   PDRPGEDD-----PGPGRRLGLDVGTVRIGVAVSDPDGILATPVSTVARTTKRRGPDGED 60

Query: 64  LRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARV----APIPVRLADE 119
           +  +  L  +   VEVIVGLPR L    GSS + A D+   +  R+      +P+R  DE
Sbjct: 61  IDSIVQLAHDYSVVEVIVGLPRMLDGSAGSSVKHAQDVGFRIRRRLERDGVDVPIRYVDE 120

Query: 120 RLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRR 161
           R+TTV AQ +L +AG+  K  R+VIDQAAAV ILQ WLDQR+
Sbjct: 121 RMTTVMAQSNLHDAGISVKEGRSVIDQAAAVEILQTWLDQRQ 162


>tr|A8LXY9|A8LXY9_SALAI Tax_Id=391037 SubName: Full=Holliday
           junction resolvase YqgF;[Salinispora arenicola]
          Length = 153

 Score =  146 bits (368), Expect = 9e-34
 Identities = 80/148 (54%), Positives = 98/148 (66%), Gaps = 6/148 (4%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG------KHLRRLATLVGETEAV 77
           RG RLG+DVG VR+GVA SDP G+LATPL T+ R+R          +  LA LV E EAV
Sbjct: 6   RGVRLGVDVGQVRVGVARSDPHGVLATPLVTLARDRDAAPDAVPSDIAELAALVAEHEAV 65

Query: 78  EVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRA 137
           EV+VGLP  LA R G +A    +    L   ++P+PV LADER++TV A R L E GVR 
Sbjct: 66  EVVVGLPVNLAGRHGPAAVQVQEYVGRLVEVISPVPVTLADERMSTVVASRRLAERGVRG 125

Query: 138 KNQRAVIDQAAAVAILQAWLDQRRTLAG 165
           + QRAV+DQAAAV ILQ+WLD +R   G
Sbjct: 126 RRQRAVVDQAAAVEILQSWLDAQRRRMG 153


>tr|B5HGT0|B5HGT0_STRPR Tax_Id=457429 SubName: Full=Putative
           uncharacterized protein;[Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 161

 Score =  145 bits (366), Expect = 2e-33
 Identities = 84/151 (55%), Positives = 101/151 (66%), Gaps = 2/151 (1%)

Query: 20  PGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEV 79
           P   RGRRL IDVG  RIGVAS DPDG+LATP+ETV         RRL  LV E E +EV
Sbjct: 6   PQMRRGRRLAIDVGDARIGVASCDPDGLLATPVETVPGRDVPAAHRRLRQLVEEYEPIEV 65

Query: 80  IVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKN 139
           +VGLPR+L+ R G +A+     A  LA  V P+PVRL DER+TTV+A + LR +GV++K 
Sbjct: 66  VVGLPRSLSGREGPAAKKIRSFAQTLAQGVKPVPVRLVDERMTTVTATQGLRASGVKSKK 125

Query: 140 QRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
            R+VIDQAAAV ILQ  L+  R  A G A G
Sbjct: 126 GRSVIDQAAAVVILQNALESER--ASGNAPG 154


>tr|A8LCW5|A8LCW5_FRASN Tax_Id=298653 SubName: Full=Holliday
           junction resolvase YqgF;[Frankia sp.]
          Length = 188

 Score =  144 bits (363), Expect = 3e-33
 Identities = 82/159 (51%), Positives = 110/159 (69%), Gaps = 5/159 (3%)

Query: 17  GLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGK---HLRRLATLVGE 73
           G +   GRG R+G+DVG+VR+GVA SDPDG+LA P+ T+RR+ S +    +  LA +V +
Sbjct: 21  GGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLRRDVSRRGFADVDELADIVRD 80

Query: 74  TEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREA 133
             AVEV+VGLPR L+ R G + + A   A+ L+ARVAP+PVRL DERLTTV A R + E 
Sbjct: 81  RHAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVPVRLVDERLTTVVAHRRMAER 140

Query: 134 GVRAKNQRAVIDQAAAVAILQAWLDQRRTL--AGGRADG 170
           G+R++ +R ++DQ AAV ILQ  LD RR    +GG A G
Sbjct: 141 GLRSRARRDLVDQEAAVQILQHHLDVRRARGGSGGAASG 179


>sp|Q2J822|RUVX_FRASC Tax_Id=106370 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Frankia sp.]
          Length = 202

 Score =  144 bits (362), Expect = 4e-33
 Identities = 79/158 (50%), Positives = 109/158 (68%), Gaps = 4/158 (2%)

Query: 8   SPDRPGD--PEGLEPGTGR-GRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGK-H 63
           S  RPGD  P    PG  R G R+G+DVG+VR+GVA+SDP G+LA P+ T+ R+R G   
Sbjct: 4   SGSRPGDSRPGDSRPGDSRPGVRIGVDVGSVRVGVAASDPGGVLAVPVTTLARDRRGNAD 63

Query: 64  LRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTT 123
           + +L  +V E +AVEV+VGLPR ++ + G + +     A+ LA R+AP+PVR  DERLTT
Sbjct: 64  IDQLVLIVRERQAVEVVVGLPRQMSGQEGRAVRLVRQYAEVLAERIAPVPVRFVDERLTT 123

Query: 124 VSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRR 161
           V+A R + E GVR++ +R+++DQ AAV ILQ  LD RR
Sbjct: 124 VAAHRRMAERGVRSRARRSLVDQEAAVQILQHDLDSRR 161


>sp|Q9KXQ0|RUVX_STRCO Tax_Id=1902 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Streptomyces coelicolor]
          Length = 167

 Score =  143 bits (361), Expect = 6e-33
 Identities = 83/159 (52%), Positives = 101/159 (63%), Gaps = 2/159 (1%)

Query: 12  PGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLV 71
           P + +   P   RGRRL +DVG  RIGVAS DPDGILATP+ETV         RRL  LV
Sbjct: 4   PENDQADGPRMRRGRRLAVDVGDARIGVASCDPDGILATPVETVPGRDVPAAHRRLRQLV 63

Query: 72  GETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLR 131
            E E +EV+VGLPR+L    G +A        ELA  +AP+PVRL DER+TTV+A + LR
Sbjct: 64  AEYEPIEVVVGLPRSLKGGEGPAAAKVRRFTQELAKGIAPVPVRLVDERMTTVTASQGLR 123

Query: 132 EAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
            +GV++K  R+VIDQAAAV ILQ  L+  R    GR  G
Sbjct: 124 ASGVKSKKGRSVIDQAAAVIILQQALESER--VSGRPPG 160


>sp|Q827S3|RUVX_STRAW Tax_Id=33903 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Streptomyces
           avermitilis]
          Length = 156

 Score =  142 bits (359), Expect = 1e-32
 Identities = 82/150 (54%), Positives = 100/150 (66%), Gaps = 2/150 (1%)

Query: 21  GTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVI 80
           G  RGRRL +DVG  RIGVAS DPDGILATP+ETV         RRL  LV E E +EV+
Sbjct: 2   GMRRGRRLAVDVGDARIGVASCDPDGILATPVETVPGRDVPAAHRRLKQLVEEYEPIEVV 61

Query: 81  VGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQ 140
           +GLPR+L    G +A      A ELA  +AP+PVRL DER+TTV+A + LR +GV++K  
Sbjct: 62  LGLPRSLKGGEGPAAVKVRAFAQELARVIAPVPVRLMDERMTTVTASQGLRASGVKSKKG 121

Query: 141 RAVIDQAAAVAILQAWLDQRRTLAGGRADG 170
           R+VIDQAAAV ILQ  L+  R    G+A G
Sbjct: 122 RSVIDQAAAVIILQQALESER--VSGKAPG 149


>tr|C4RHN0|C4RHN0_9ACTO Tax_Id=219305 SubName: Full=Holliday
           junction resolvase yqgF;[Micromonospora sp. ATCC 39149]
          Length = 153

 Score =  142 bits (359), Expect = 1e-32
 Identities = 78/146 (53%), Positives = 99/146 (67%), Gaps = 6/146 (4%)

Query: 22  TGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSG------KHLRRLATLVGETE 75
           T RG RLG+DVG VR+GVA SDP G+LATPL T+ R+ +         +  L  L+ E E
Sbjct: 4   TLRGVRLGVDVGQVRVGVARSDPHGVLATPLVTLARDLTTADDAVPSDMAELVALIAEHE 63

Query: 76  AVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGV 135
            VEV+VGLP  LA + G +A++    AD LA  +AP+PV L DER++TV A R L E GV
Sbjct: 64  CVEVVVGLPINLAGQHGPAARNVKAYADRLADVIAPVPVTLTDERMSTVVASRRLAEGGV 123

Query: 136 RAKNQRAVIDQAAAVAILQAWLDQRR 161
           R K +RAV+DQAAAV ILQ+WLD +R
Sbjct: 124 RGKRRRAVVDQAAAVEILQSWLDAQR 149


>tr|A4X5Z1|A4X5Z1_SALTO Tax_Id=369723 SubName: Full=Holliday
           junction resolvase YqgF;[Salinispora tropica]
          Length = 153

 Score =  142 bits (358), Expect = 1e-32
 Identities = 79/144 (54%), Positives = 97/144 (67%), Gaps = 6/144 (4%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERS------GKHLRRLATLVGETEAV 77
           RG RLG+DVG VR+GVA SDP G+LATPL T+ R+R+         +  LA LV E EAV
Sbjct: 6   RGVRLGVDVGQVRVGVARSDPHGVLATPLVTLARDRAVAPEAVPSDMAELAALVTEHEAV 65

Query: 78  EVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRA 137
           EV+VGLP  LA R G +A         L   ++P+PV LADER++TV A R L E GVR 
Sbjct: 66  EVVVGLPVNLAGRQGPAAVHVQAYVGRLVEVISPVPVTLADERMSTVVASRRLAERGVRG 125

Query: 138 KNQRAVIDQAAAVAILQAWLDQRR 161
           + QRAV+DQAAAV ILQ+WLD +R
Sbjct: 126 RRQRAVVDQAAAVEILQSWLDAQR 149


>tr|Q0RF66|Q0RF66_FRAAA Tax_Id=326424 SubName: Full=Putative
           uncharacterized protein;[Frankia alni]
          Length = 205

 Score =  141 bits (356), Expect = 2e-32
 Identities = 73/150 (48%), Positives = 103/150 (68%), Gaps = 1/150 (0%)

Query: 12  PGDPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRE-RSGKHLRRLATL 70
           PGD  G  P   RG R+G+DVG+VR+GVA+SDP G+LA P+ T+ R+ R    + +L  +
Sbjct: 16  PGDGSGSGPDLRRGVRIGVDVGSVRVGVAASDPGGVLAVPVTTLARDKRHNADIEQLVQI 75

Query: 71  VGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSL 130
           V + +AVEV+VGLPR ++ + G + Q      + LA R+AP+PVR  DERLTTV+A R +
Sbjct: 76  VRDRQAVEVVVGLPRQMSGQEGRAVQLVRQYVEVLAERIAPVPVRFVDERLTTVAAHRRM 135

Query: 131 REAGVRAKNQRAVIDQAAAVAILQAWLDQR 160
            E GVR++ +R+++DQ AAV ILQ  LD R
Sbjct: 136 AERGVRSRARRSLVDQEAAVQILQHDLDSR 165


>tr|C9NI22|C9NI22_9ACTO Tax_Id=591167 SubName: Full=Holliday
           junction resolvase YqgF;[Streptomyces flavogriseus ATCC
           33331]
          Length = 157

 Score =  141 bits (355), Expect = 3e-32
 Identities = 84/147 (57%), Positives = 97/147 (65%), Gaps = 2/147 (1%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGL 83
           RGRRL IDVG  RIGVAS DPDGILATP+ETV         RRL  +V E E +EVIVGL
Sbjct: 6   RGRRLAIDVGDARIGVASCDPDGILATPVETVPGRDVPAAHRRLGQIVEEYEPIEVIVGL 65

Query: 84  PRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAV 143
           PR+L    G +A      A   A  VAPIPVRL DER+TTV+A + LR +GV++K  R+V
Sbjct: 66  PRSLGGGEGPAAAKVRAFAQVFARAVAPIPVRLLDERMTTVTATQGLRASGVKSKKGRSV 125

Query: 144 IDQAAAVAILQAWLDQRRTLAGGRADG 170
           IDQAAAV ILQ  L+  R  A G A G
Sbjct: 126 IDQAAAVVILQNALESER--ASGSAPG 150


>tr|A0LUJ1|A0LUJ1_ACIC1 Tax_Id=351607 SubName: Full=Holliday
           junction resolvase YqgF;[Acidothermus cellulolyticus]
          Length = 173

 Score =  140 bits (353), Expect = 5e-32
 Identities = 82/147 (55%), Positives = 98/147 (66%), Gaps = 3/147 (2%)

Query: 25  GRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGK-HLRRLATLVGETEAVEVIVGL 83
           G R+G+DVGTVRIGVA SDPDG LA P ET+ R+ SG   LRRLA LV E  AVEV+VGL
Sbjct: 9   GVRIGVDVGTVRIGVAVSDPDGRLAVPAETLPRDASGAGELRRLAQLVEERGAVEVVVGL 68

Query: 84  PRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAV 143
           P +L    G++A+D    A  LA  V P+PVRL DER TTV A R L+ AG+  + +RAV
Sbjct: 69  PVSLRGTAGAAARDIAGYARRLATAVHPVPVRLVDERFTTVHADRRLQSAGLAGRQRRAV 128

Query: 144 IDQAAAVAILQAWLDQRRTLAGGRADG 170
           +DQ AA  +LQ  LD  R  A GR  G
Sbjct: 129 VDQLAAAILLQDALDAER--ATGRPPG 153


>tr|C9Z660|C9Z660_STRSW Tax_Id=680198 (ruvX)SubName: Full=Putative
           holliday junction resolvase subunit;[Streptomyces
           scabies]
          Length = 154

 Score =  140 bits (352), Expect = 6e-32
 Identities = 82/147 (55%), Positives = 98/147 (66%), Gaps = 2/147 (1%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGL 83
           RGRRL +DVG  RIGVAS DPDGILATP+ETV         RRL  LV E   +EVIVGL
Sbjct: 3   RGRRLALDVGDARIGVASCDPDGILATPVETVPGRDVPAAQRRLRQLVDEYVPMEVIVGL 62

Query: 84  PRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERLTTVSAQRSLREAGVRAKNQRAV 143
           PR+L    G +A      A ELA  +AP+PVRL DER+TTV+A + LR +GV++K  R+V
Sbjct: 63  PRSLKGGEGPAAVKVRGFAQELARMIAPVPVRLLDERMTTVTAGQGLRASGVKSKKGRSV 122

Query: 144 IDQAAAVAILQAWLDQRRTLAGGRADG 170
           IDQAAAV ILQ  L+  R    G+A G
Sbjct: 123 IDQAAAVIILQQALESER--MSGKAPG 147


>tr|C7PVQ5|C7PVQ5_CATAD Tax_Id=479433 SubName: Full=Holliday
           junction resolvase YqgF;[Catenulispora acidiphila]
          Length = 171

 Score =  139 bits (350), Expect = 1e-31
 Identities = 82/148 (55%), Positives = 100/148 (67%), Gaps = 3/148 (2%)

Query: 24  RGRRLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGL 83
           RG RLG+DVGTVRIGVAS D DG+LATP+ETV+ E     L RLA L  E EA E++VGL
Sbjct: 17  RGVRLGVDVGTVRIGVASCDRDGLLATPVETVKAEPRRASLDRLAALAAEYEAFEIVVGL 76

Query: 84  PRTLADRIGSSAQDAIDLADELAARVAP-IPVRLADERLTTVSAQRSLREAGVRAKNQRA 142
           PR+L+   G +A      A +L  R+ P  PVRL DERL+TV+A + LR +GV+AK  R+
Sbjct: 77  PRSLSGGEGPAAAKIRAYARDLVRRLGPGTPVRLVDERLSTVTATQGLRASGVKAKKGRS 136

Query: 143 VIDQAAAVAILQAWLDQRRTLAGGRADG 170
           V+DQAAAV ILQ  LD  R    GR  G
Sbjct: 137 VVDQAAAVVILQNALDAER--MSGRPPG 162


>sp|C3PGN1|RUVX_CORA7 Tax_Id=548476 RecName: Full=Putative Holliday
           junction resolvase; EC=3.1.-.-;[Corynebacterium
           aurimucosum]
          Length = 182

 Score =  139 bits (349), Expect = 1e-31
 Identities = 89/174 (51%), Positives = 106/174 (60%), Gaps = 21/174 (12%)

Query: 9   PDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRRE-----RSG 61
           PD+PG  DP       G GRRLG+DVGTVRIGVA SD D  LA P+ETVRRE     R  
Sbjct: 5   PDKPGVDDP-------GPGRRLGLDVGTVRIGVAVSDRDARLAMPVETVRRETGFKDRDK 57

Query: 62  KHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVA-------PIPV 114
             + RL  L+ E +AVEV VGLPR L     SS + A ++A  +  R+A       P PV
Sbjct: 58  DDIDRLLDLIHEYDAVEVAVGLPRDLKGNGSSSVKHAKEIAFRIRRRLAKDDRMKEPPPV 117

Query: 115 RLADERLTTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRTLAGGRA 168
           R+ DERLTTV A  +LR +GV  K  R+VIDQAAAV ILQ+WLD R     G +
Sbjct: 118 RMVDERLTTVVATSALRASGVSEKRGRSVIDQAAAVEILQSWLDARHFALNGHS 171


>tr|D1AEX7|D1AEX7_THECU Tax_Id=471852 SubName: Full=Holliday
           junction resolvase YqgF;[Thermomonospora curvata DSM
           43183]
          Length = 152

 Score =  139 bits (349), Expect = 1e-31
 Identities = 83/139 (59%), Positives = 99/139 (71%), Gaps = 6/139 (4%)

Query: 27  RLGIDVGTVRIGVASSDPDGILATPLETVRRERSGKHLRRLATLVGETEAVEVIVGLPRT 86
           RLGIDVG+VRIGVA SDP GILATPLETVRR +    L R+A LV E EAVEVIVGLP +
Sbjct: 2   RLGIDVGSVRIGVARSDPAGILATPLETVRRGKGD--LDRIAELVAEHEAVEVIVGLPTS 59

Query: 87  LADRIGSSAQDAIDLADELAARVAPI----PVRLADERLTTVSAQRSLREAGVRAKNQRA 142
           L+ R G +A  A   A+ LA R++ +     VRL DERLTTV+A+  LR +GVR K +R 
Sbjct: 60  LSGRSGPAAAQARRFAEALAGRLSQLLPDGGVRLYDERLTTVTAEAELRRSGVRGKARRQ 119

Query: 143 VIDQAAAVAILQAWLDQRR 161
           V+DQAAA  +LQA LD  R
Sbjct: 120 VVDQAAAAVLLQAALDGER 138


>tr|C0XSS3|C0XSS3_9CORY Tax_Id=525263 SubName: Full=Holliday
           junction resolvase family protein;[Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 164

 Score =  138 bits (348), Expect = 2e-31
 Identities = 87/161 (54%), Positives = 102/161 (63%), Gaps = 15/161 (9%)

Query: 9   PDRPG--DPEGLEPGTGRGRRLGIDVGTVRIGVASSDPDGILATPLETVRR-----ERSG 61
           PD PG  DP       G GRR+G+DVGTVRIGVA SD D  LA P+ETV R     +  G
Sbjct: 5   PDTPGVDDP-------GNGRRIGLDVGTVRIGVAVSDRDARLAMPVETVDRVTNFGDDDG 57

Query: 62  KHLRRLATLVGETEAVEVIVGLPRTLADRIGSSAQDAIDLADELAARVAPIPVRLADERL 121
             + RL  L+G   AVEV+VGLPR L      S + A D+A  L AR   +PVR+ DERL
Sbjct: 58  ADVDRLVELIGFYGAVEVVVGLPRDLKGNGSKSVKHAEDIAARLRARCG-VPVRMGDERL 116

Query: 122 TTVSAQRSLREAGVRAKNQRAVIDQAAAVAILQAWLDQRRT 162
           TTV+A  +LR +GV AK  R VIDQAAAV ILQ+WLD R T
Sbjct: 117 TTVAATHALRASGVSAKAGRKVIDQAAAVEILQSWLDGRLT 157


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.316    0.134    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,232,883,077
Number of extensions: 49196737
Number of successful extensions: 171481
Number of sequences better than 10.0: 1816
Number of HSP's gapped: 173173
Number of HSP's successfully gapped: 1816
Length of query: 170
Length of database: 3,846,993,858
Length adjustment: 127
Effective length of query: 43
Effective length of database: 2,415,043,077
Effective search space: 103846852311
Effective search space used: 103846852311
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)