BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2174 (147 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HNC5|B2HNC5_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 117 3e-25 tr|A0QI71|A0QI71_MYCA1 Tax_Id=243243 SubName: Full=Peptidase, A2... 61 4e-08 tr|Q741K9|Q741K9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 60 1e-07 tr|A4TBX0|A4TBX0_MYCGI Tax_Id=350054 SubName: Full=Peptidase A24... 59 2e-07 tr|A0QWQ8|A0QWQ8_MYCS2 Tax_Id=246196 SubName: Full=Peptidase, A2... 59 2e-07 tr|A1T8F2|A1T8F2_MYCVP Tax_Id=350058 SubName: Full=Peptidase A24... 58 4e-07 tr|Q7TYB4|Q7TYB4_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 57 9e-07 tr|P95002|P95002_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 57 9e-07 tr|C6DME4|C6DME4_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 57 9e-07 tr|C1AF20|C1AF20_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 57 9e-07 tr|A5U5Q1|A5U5Q1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 57 9e-07 tr|A1KLP9|A1KLP9_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 57 9e-07 tr|A5WQG0|A5WQG0_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 57 9e-07 tr|A4KNX7|A4KNX7_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 57 9e-07 tr|A2VKR1|A2VKR1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 57 9e-07 tr|B1MCF2|B1MCF2_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 53 1e-05 tr|Q1B9H6|Q1B9H6_MYCSS Tax_Id=164756 SubName: Full=Peptidase A24... 49 2e-04 tr|A3PZ48|A3PZ48_MYCSJ Tax_Id=164757 SubName: Full=Peptidase A24... 49 2e-04 tr|A1UFI7|A1UFI7_MYCSK Tax_Id=189918 SubName: Full=Peptidase A24... 49 2e-04 tr|C3JSS1|C3JSS1_RHOER Tax_Id=596309 SubName: Full=Peptidase A24... 41 0.038 tr|C0ZZB2|C0ZZB2_RHOE4 Tax_Id=234621 SubName: Full=Conserved hyp... 40 0.085 tr|C1B4H8|C1B4H8_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ... 39 0.14 tr|Q5YTK9|Q5YTK9_NOCFA Tax_Id=37329 SubName: Full=Putative pepti... 39 0.19 tr|Q0S0N3|Q0S0N3_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 37 0.94 >tr|B2HNC5|B2HNC5_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 147 Score = 117 bits (294), Expect = 3e-25 Identities = 68/134 (50%), Positives = 68/134 (50%) Query: 1 MWLVIRTPXXXXXXXXXXXXSYTDIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXX 60 MWLVIRTP SYTDIRHRRLPNRFT Sbjct: 1 MWLVIRTPVVAVVVAWLLVLSYTDIRHRRLPNRFTLPGAGAMLLGALVAGRGTAALAGAA 60 Query: 61 XXTSVYLLVHLLAPAALGAGDVKXXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARL 120 TSVYLLVHLLAPAALGAGDVK VEVWF VGARL Sbjct: 61 ALTSVYLLVHLLAPAALGAGDVKLAIGLGALAGSLGVEVWFLAALAAPLMTALWAVGARL 120 Query: 121 RTGALAVPHGPSMC 134 RTGALAVPHGPSMC Sbjct: 121 RTGALAVPHGPSMC 134 >tr|A0QI71|A0QI71_MYCA1 Tax_Id=243243 SubName: Full=Peptidase, A24 (Type IV prepilin peptidase) family protein;[Mycobacterium avium] Length = 142 Score = 61.2 bits (147), Expect = 4e-08 Identities = 37/111 (33%), Positives = 43/111 (38%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 DIR RLPN T ++YLLVH +AP +GAGDVK Sbjct: 20 DIRQHRLPNALTLTGAAAILAAAGLAGRGPSALAGAAALAAIYLLVHAVAPGGMGAGDVK 79 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 V VWF V AR+R AVPHGPS+C Sbjct: 80 LALGVGALTGCGGVGVWFLAALAAPLLTALVGVLARVRRAGPAVPHGPSLC 130 >tr|Q741K9|Q741K9_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 142 Score = 59.7 bits (143), Expect = 1e-07 Identities = 36/111 (32%), Positives = 42/111 (37%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 DIR RLPN T ++YLLVH +AP +GAGDVK Sbjct: 20 DIRQHRLPNALTLTGAAAILAAAGLAGRGPSALAGAAALAAIYLLVHAVAPGGMGAGDVK 79 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 V VWF V AR+R VPHGPS+C Sbjct: 80 LALGVGALTGCGGVGVWFLAALAAPLLTVLVGVLARVRRAGPTVPHGPSLC 130 >tr|A4TBX0|A4TBX0_MYCGI Tax_Id=350054 SubName: Full=Peptidase A24A, prepilin type IV;[Mycobacterium gilvum] Length = 147 Score = 58.5 bits (140), Expect = 2e-07 Identities = 42/122 (34%), Positives = 47/122 (38%), Gaps = 22/122 (18%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 DIRHRRLPN T +VY+ VHL +P ALGAGDVK Sbjct: 24 DIRHRRLPNVLTLPGAAVILVAATVVGHGGPALLGATALFAVYVTVHLFSPGALGAGDVK 83 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALA-----------VPHGPS 132 +VW +GA L TGALA VPHGPS Sbjct: 84 LAIGLGALTGAYGADVW-----------VVAALGASLMTGALALCRRLQGAGPDVPHGPS 132 Query: 133 MC 134 MC Sbjct: 133 MC 134 >tr|A0QWQ8|A0QWQ8_MYCS2 Tax_Id=246196 SubName: Full=Peptidase, A24 (Type IV prepilin peptidase) family protein;[Mycobacterium smegmatis] Length = 147 Score = 58.5 bits (140), Expect = 2e-07 Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T +++YL+VHL++P +LG GDVK Sbjct: 26 DLRLRRLPNWLTVPGAVLILVGATLAGRGAAALAGAAALSALYLVVHLVSPRSLGGGDVK 85 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 +VW+ +GA LR GA VPHGPSMC Sbjct: 86 LAVGLGALTGMFGADVWWLAALGAPLLTGVVALGAALR-GATTVPHGPSMC 135 >tr|A1T8F2|A1T8F2_MYCVP Tax_Id=350058 SubName: Full=Peptidase A24A, prepilin type IV; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 150 Score = 57.8 bits (138), Expect = 4e-07 Identities = 36/111 (32%), Positives = 41/111 (36%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 DIR RRLPN T +VY VHLLAPAA+GAGDVK Sbjct: 24 DIRQRRLPNMLTVPGAAVILAVAALAGHGRPAALGAAALFTVYATVHLLAPAAMGAGDVK 83 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 V+ W + R+ VPHGPSMC Sbjct: 84 LAIGLGALTGVFGVDAWVLAAVGASVLTGVLALCLRMAGAGATVPHGPSMC 134 >tr|Q7TYB4|Q7TYB4_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb2581c;[Mycobacterium bovis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|P95002|P95002_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|C6DME4|C6DME4_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|C1AF20|C1AF20_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|A5U5Q1|A5U5Q1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|A1KLP9|A1KLP9_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2574c;[Mycobacterium bovis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|A5WQG0|A5WQG0_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|A4KNX7|A4KNX7_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|A2VKR1|A2VKR1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 139 Score = 56.6 bits (135), Expect = 9e-07 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T VYLLVHL PAA+GAGDVK Sbjct: 17 DVRQRRLPNWLTLPGAGVILLFAGLAGRGVPALAGAAALAGVYLLVHLALPAAMGAGDVK 76 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 VEVWF V G +PHGPSMC Sbjct: 77 LAIGLGGLTGCFGVEVWFLAALAAPLLTAVCGVMV-TPWGVRTLPHGPSMC 126 >tr|B1MCF2|B1MCF2_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 146 Score = 52.8 bits (125), Expect = 1e-05 Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 24/126 (19%) Query: 21 SYTDIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAG 80 SY DIR+RRLPN T T++YL HLL+P A+GAG Sbjct: 17 SYFDIRYRRLPNWLTLPAAVVIITVGLWGRGPSIWAGAAAL-TALYLAAHLLSPRAMGAG 75 Query: 81 DVKXXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTG------------ALAVP 128 DVK ++ WF +GA L TG VP Sbjct: 76 DVKLAVSTGGLAGAFGLDAWF-----------LAAIGAPLVTGLTGLVLLGLGRRGATVP 124 Query: 129 HGPSMC 134 HGPSMC Sbjct: 125 HGPSMC 130 >tr|Q1B9H6|Q1B9H6_MYCSS Tax_Id=164756 SubName: Full=Peptidase A24A, prepilin type IV;[Mycobacterium sp.] Length = 133 Score = 48.5 bits (114), Expect = 2e-04 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T ++Y HLLAPAA+GAGDVK Sbjct: 12 DLRWRRLPNWLTLPGATVILVGAVLAGRGTPAALGAAALFTLYAATHLLAPAAMGAGDVK 71 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 +VW + A L VPHGPSMC Sbjct: 72 LALGVGGLTGAFGADVWLLAALAAPLLTAICAL-ATLTRRDRTVPHGPSMC 121 >tr|A3PZ48|A3PZ48_MYCSJ Tax_Id=164757 SubName: Full=Peptidase A24A, prepilin type IV;[Mycobacterium sp.] Length = 133 Score = 48.5 bits (114), Expect = 2e-04 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T ++Y HLLAPAA+GAGDVK Sbjct: 12 DLRWRRLPNWLTLPGATVILVGAVLAGRGTPAALGAAALFTLYAATHLLAPAAMGAGDVK 71 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 +VW + A L VPHGPSMC Sbjct: 72 LALGVGGLTGAFGADVWLLAALAAPLLTAICAL-ATLTRRDRTVPHGPSMC 121 >tr|A1UFI7|A1UFI7_MYCSK Tax_Id=189918 SubName: Full=Peptidase A24A, prepilin type IV;[Mycobacterium sp.] Length = 133 Score = 48.5 bits (114), Expect = 2e-04 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T ++Y HLLAPAA+GAGDVK Sbjct: 12 DLRWRRLPNWLTLPGATVILVGAVLAGRGTPAALGAAALFTLYAATHLLAPAAMGAGDVK 71 Query: 84 XXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 +VW + A L VPHGPSMC Sbjct: 72 LALGVGGLTGAFGADVWLLAALAAPLLTAICAL-ATLTRRDRTVPHGPSMC 121 >tr|C3JSS1|C3JSS1_RHOER Tax_Id=596309 SubName: Full=Peptidase A24A, prepilin type IV;[Rhodococcus erythropolis SK121] Length = 168 Score = 41.2 bits (95), Expect = 0.038 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 5/119 (4%) Query: 21 SYTDIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAG 80 S D+ RRLPN FT ++LL H+++P ++G G Sbjct: 37 STVDLAVRRLPNSFTLPGYAVVMVYATVSGTVWVAAVGSALLAGIHLLAHVMSPGSMGVG 96 Query: 81 DVKXXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARL-RTGALA----VPHGPSMC 134 DVK + W L R G +A + HGPSMC Sbjct: 97 DVKLSLPLGAVTGLVGADAWLWSLVSASVLTATLGTALELRRRGPVAHNSPIAHGPSMC 155 >tr|C0ZZB2|C0ZZB2_RHOE4 Tax_Id=234621 SubName: Full=Conserved hypothetical membrane protein;[Rhodococcus erythropolis] Length = 154 Score = 40.0 bits (92), Expect = 0.085 Identities = 30/124 (24%), Positives = 42/124 (33%), Gaps = 10/124 (8%) Query: 21 SYTDIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAG 80 S D+ RRLPN FT ++LL H+++P ++G G Sbjct: 18 STVDLAVRRLPNSFTLPGYVVVMVYAAASGTVWVAAVGSALLAGIHLLAHVMSPGSMGLG 77 Query: 81 DVKXXXXXXXXXXXXXVEVWFXXXXXXXXXXXXXXVGARLR------TGALA----VPHG 130 DVK + W V LR +G +A + HG Sbjct: 78 DVKLSLPLGALTGLVGADAWLWSLVSASVLTATLGVVIELRKLGRRQSGPVAHNSPIAHG 137 Query: 131 PSMC 134 PSMC Sbjct: 138 PSMC 141 >tr|C1B4H8|C1B4H8_RHOOB Tax_Id=632772 SubName: Full=Hypothetical membrane protein;[Rhodococcus opacus] Length = 200 Score = 39.3 bits (90), Expect = 0.14 Identities = 30/112 (26%), Positives = 38/112 (33%), Gaps = 1/112 (0%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+ RRLPN T + YL ++L AP A+GAGDVK Sbjct: 76 DLCARRLPNLLTLPGFLVIVGIGVATGSASAAVIGGLLLAAAYLALYLGAPGAVGAGDVK 135 Query: 84 XXXXXXXXXXXXXVEVW-FXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 E W F V +R +PHGP+MC Sbjct: 136 LALGVGAAAGLAGGEAWVFAAALAPALTAVAGCVVLAVRRSPPPLPHGPAMC 187 >tr|Q5YTK9|Q5YTK9_NOCFA Tax_Id=37329 SubName: Full=Putative peptidase;[Nocardia farcinica] Length = 150 Score = 38.9 bits (89), Expect = 0.19 Identities = 35/119 (29%), Positives = 40/119 (33%), Gaps = 8/119 (6%) Query: 24 DIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDVK 83 D+R RRLPN T YLLVHLLAP A GAGD K Sbjct: 20 DLRTRRLPNVLTGIGAAAVLGYAAGSGRLGVALGGALLLALPYLLVHLLAPTACGAGDAK 79 Query: 84 XXXXXXXXXXXXXVEVWF---XXXXXXXXXXXXXXVGAR--LRTGALA---VPHGPSMC 134 W +GAR G+ A +PHGP+MC Sbjct: 80 LAVGLGAAAGLGGSTAWVAAALGGPLLTAAVGLVVLGARGPATRGSPADRRLPHGPAMC 138 >tr|Q0S0N3|Q0S0N3_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 219 Score = 36.6 bits (83), Expect = 0.94 Identities = 29/113 (25%), Positives = 37/113 (32%), Gaps = 1/113 (0%) Query: 23 TDIRHRRLPNRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVYLLVHLLAPAALGAGDV 82 TD+ R+LPN T S YL ++L AP A+GAGDV Sbjct: 94 TDLCARKLPNLLTLPGFLAIVGVGAATGSAATAVIGGFLLASAYLALYLGAPGAVGAGDV 153 Query: 83 KXXXXXXXXXXXXXVEVW-FXXXXXXXXXXXXXXVGARLRTGALAVPHGPSMC 134 K E W + R +PHGP+MC Sbjct: 154 KLALGVGAAAGLAGGEAWVLAAGLAPALTALVGCIVLAPRGSPPPLPHGPAMC 206 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.328 0.140 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 490,887,367 Number of extensions: 6640924 Number of successful extensions: 4762 Number of sequences better than 10.0: 24 Number of HSP's gapped: 4722 Number of HSP's successfully gapped: 24 Length of query: 147 Length of database: 3,846,993,858 Length adjustment: 110 Effective length of query: 37 Effective length of database: 2,606,721,528 Effective search space: 96448696536 Effective search space used: 96448696536 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 75 (33.5 bits)