BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2182 (173 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HND3|B2HND3_MYCMM Tax_Id=216594 (nusB)SubName: Full=N utili... 288 2e-76 tr|A0PPH7|A0PPH7_MYCUA Tax_Id=362242 (nusB)SubName: Full=N utili... 282 1e-74 sp|Q741J2|NUSB_MYCPA Tax_Id=1770 (nusB)RecName: Full=N utilizati... 217 3e-55 sp|A0QI54|NUSB_MYCA1 Tax_Id=243243 (nusB)RecName: Full=N utiliza... 217 3e-55 sp|C1AF01|NUSB_MYCBT Tax_Id=561275 (nusB)RecName: Full=N utiliza... 209 1e-52 sp|A1KLN0|NUSB_MYCBP Tax_Id=410289 (nusB)RecName: Full=N utiliza... 209 1e-52 sp|Q7TYC8|NUSB_MYCBO Tax_Id=1765 (nusB)RecName: Full=N utilizati... 209 1e-52 sp|P95020|NUSB_MYCTU Tax_Id=1773 (nusB)RecName: Full=N utilizati... 206 1e-51 sp|A5U5N2|NUSB_MYCTA Tax_Id=419947 (nusB)RecName: Full=N utiliza... 206 1e-51 tr|C6DMG3|C6DMG3_MYCTK Tax_Id=478434 SubName: Full=N utilization... 206 1e-51 tr|A5WQE1|A5WQE1_MYCTF Tax_Id=336982 SubName: Full=N utilization... 206 1e-51 tr|A4KNW0|A4KNW0_MYCTU Tax_Id=395095 SubName: Full=N utilization... 206 1e-51 tr|A2VKP3|A2VKP3_MYCTU Tax_Id=348776 SubName: Full=N utilization... 206 1e-51 sp|Q9CCR9|NUSB_MYCLE Tax_Id=1769 (nusB)RecName: Full=N utilizati... 194 2e-48 sp|B8ZUK7|NUSB_MYCLB Tax_Id=561304 (nusB)RecName: Full=N utiliza... 194 2e-48 sp|A0QWR5|NUSB_MYCS2 Tax_Id=246196 (nusB)RecName: Full=N utiliza... 193 5e-48 sp|Q1B9G7|NUSB_MYCSS Tax_Id=164756 (nusB)RecName: Full=N utiliza... 192 1e-47 sp|A1UFJ6|NUSB_MYCSK Tax_Id=189918 (nusB)RecName: Full=N utiliza... 192 1e-47 sp|A3PZ57|NUSB_MYCSJ Tax_Id=164757 (nusB)RecName: Full=N utiliza... 192 1e-47 sp|A4TBX3|NUSB_MYCGI Tax_Id=350054 (nusB)RecName: Full=N utiliza... 189 1e-46 sp|A1T8G0|NUSB_MYCVP Tax_Id=350058 (nusB)RecName: Full=N utiliza... 186 6e-46 tr|B1MCE4|B1MCE4_MYCA9 Tax_Id=561007 SubName: Full=Probable tran... 179 1e-43 sp|C1B4I5|NUSB_RHOOB Tax_Id=632772 (nusB)RecName: Full=N utiliza... 153 6e-36 sp|Q0S0M6|NUSB_RHOSR Tax_Id=101510 (nusB)RecName: Full=N utiliza... 152 1e-35 sp|Q5YTL2|NUSB_NOCFA Tax_Id=37329 (nusB)RecName: Full=N utilizat... 149 1e-34 sp|C0ZZC1|NUSB_RHOE4 Tax_Id=234621 (nusB)RecName: Full=N utiliza... 148 2e-34 tr|C3JST1|C3JST1_RHOER Tax_Id=596309 (nusB)SubName: Full=Transcr... 148 2e-34 tr|C2ATL1|C2ATL1_TSUPA Tax_Id=521096 SubName: Full=NusB antiterm... 137 6e-31 tr|D0LCQ6|D0LCQ6_GORB4 Tax_Id=526226 SubName: Full=Transcription... 133 8e-30 tr|C8XJK9|C8XJK9_NAKMY Tax_Id=479431 SubName: Full=NusB antiterm... 123 9e-27 sp|C5C681|NUSB_BEUC1 Tax_Id=471853 (nusB)RecName: Full=N utiliza... 121 2e-26 tr|C6W8Z7|C6W8Z7_ACTMD Tax_Id=446462 SubName: Full=NusB antiterm... 121 3e-26 tr|C1WUI7|C1WUI7_9ACTO Tax_Id=479435 SubName: Full=Transcription... 116 8e-25 sp|Q47QY5|NUSB_THEFY Tax_Id=269800 (nusB)RecName: Full=N utiliza... 115 2e-24 tr|C1RPY9|C1RPY9_9CELL Tax_Id=446466 SubName: Full=NusB antiterm... 114 3e-24 tr|C4EKZ6|C4EKZ6_STRRS Tax_Id=479432 SubName: Full=Transcription... 114 5e-24 sp|A1SJD8|NUSB_NOCSJ Tax_Id=196162 (nusB)RecName: Full=N utiliza... 113 7e-24 sp|A0JX79|NUSB_ARTS2 Tax_Id=290399 (nusB)RecName: Full=N utiliza... 112 2e-23 tr|C0UA51|C0UA51_9ACTO Tax_Id=526225 SubName: Full=NusB antiterm... 112 2e-23 tr|C7R4C7|C7R4C7_JONDD Tax_Id=471856 SubName: Full=NusB antiterm... 110 4e-23 tr|D1BSN7|D1BSN7_9MICO Tax_Id=446471 SubName: Full=NusB antiterm... 110 6e-23 sp|A6WCD3|NUSB_KINRD Tax_Id=266940 (nusB)RecName: Full=N utiliza... 108 2e-22 tr|C4RHP4|C4RHP4_9ACTO Tax_Id=219305 SubName: Full=Transcription... 107 6e-22 tr|A9WSB5|A9WSB5_RENSM Tax_Id=288705 (nusB)SubName: Full=Transcr... 106 1e-21 sp|A1R700|NUSB_ARTAT Tax_Id=290340 (nusB)RecName: Full=N utiliza... 105 1e-21 tr|B2GI93|B2GI93_KOCRD Tax_Id=378753 (nusB)SubName: Full=Transcr... 105 2e-21 sp|A8LY11|NUSB_SALAI Tax_Id=391037 (nusB)RecName: Full=N utiliza... 105 2e-21 tr|C7PVS0|C7PVS0_CATAD Tax_Id=479433 SubName: Full=NusB antiterm... 105 2e-21 tr|C7MSI9|C7MSI9_SACVD Tax_Id=471857 SubName: Full=Transcription... 104 3e-21 tr|C5CCF7|C5CCF7_MICLC Tax_Id=465515 SubName: Full=Transcription... 104 4e-21 >tr|B2HND3|B2HND3_MYCMM Tax_Id=216594 (nusB)SubName: Full=N utilization substance protein NusB;[Mycobacterium marinum] Length = 173 Score = 288 bits (737), Expect = 2e-76 Identities = 147/173 (84%), Positives = 147/173 (84%) Query: 1 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA 60 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA Sbjct: 1 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA 60 Query: 61 VARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXX 120 VARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLY Sbjct: 61 VARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVE 120 Query: 121 LAKELSTDDSPSFVNGVLGQVMLVTPQIXXXXXXXXXXXPDESSRLPENQGSC 173 LAKELSTDDSPSFVNGVLGQVMLVTPQI PDESSRLPENQGSC Sbjct: 121 LAKELSTDDSPSFVNGVLGQVMLVTPQIRAAAAAVRQAVPDESSRLPENQGSC 173 >tr|A0PPH7|A0PPH7_MYCUA Tax_Id=362242 (nusB)SubName: Full=N utilization substance protein NusB;[Mycobacterium ulcerans] Length = 173 Score = 282 bits (721), Expect = 1e-74 Identities = 144/173 (83%), Positives = 145/173 (83%) Query: 1 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA 60 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA Sbjct: 1 MPEGRPGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAA 60 Query: 61 VARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXX 120 VARGI +HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLY Sbjct: 61 VARGIGEHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVE 120 Query: 121 LAKELSTDDSPSFVNGVLGQVMLVTPQIXXXXXXXXXXXPDESSRLPENQGSC 173 LAKELSTDDSPSFVNGVLGQVMLV PQI PDESSRLPENQGSC Sbjct: 121 LAKELSTDDSPSFVNGVLGQVMLVRPQIRAAAAAVRQAVPDESSRLPENQGSC 173 >sp|Q741J2|NUSB_MYCPA Tax_Id=1770 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium paratuberculosis] Length = 156 Score = 217 bits (553), Expect = 3e-55 Identities = 108/141 (76%), Positives = 117/141 (82%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KP++GRHQARKRAVDL+FEAEARGL P E+ D+RT LA+T P+VAPL PYTAAVARG+ Sbjct: 3 KPLRGRHQARKRAVDLLFEAEARGLSPAEVVDVRTGLADTNPEVAPLQPYTAAVARGVGD 62 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLI+SHLQGWTLDRLPAVDRAILRVAVWELLY LAKELST Sbjct: 63 HAAHIDDLISSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVQLAKELST 122 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQI Sbjct: 123 DDSPGFVNGVLGQVMLVTPQI 143 >sp|A0QI54|NUSB_MYCA1 Tax_Id=243243 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium avium] Length = 156 Score = 217 bits (553), Expect = 3e-55 Identities = 108/141 (76%), Positives = 117/141 (82%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KP++GRHQARKRAVDL+FEAEARGL P E+ D+RT LA+T P+VAPL PYTAAVARG+ Sbjct: 3 KPLRGRHQARKRAVDLLFEAEARGLSPAEVVDVRTGLADTNPEVAPLQPYTAAVARGVGD 62 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLI+SHLQGWTLDRLPAVDRAILRVAVWELLY LAKELST Sbjct: 63 HAAHIDDLISSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVQLAKELST 122 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQI Sbjct: 123 DDSPGFVNGVLGQVMLVTPQI 143 >sp|C1AF01|NUSB_MYCBT Tax_Id=561275 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium bovis] Length = 156 Score = 209 bits (531), Expect = 1e-52 Identities = 102/141 (72%), Positives = 114/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAVDL+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVDLLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >sp|A1KLN0|NUSB_MYCBP Tax_Id=410289 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium bovis] Length = 156 Score = 209 bits (531), Expect = 1e-52 Identities = 102/141 (72%), Positives = 114/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAVDL+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVDLLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >sp|Q7TYC8|NUSB_MYCBO Tax_Id=1765 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium bovis] Length = 156 Score = 209 bits (531), Expect = 1e-52 Identities = 102/141 (72%), Positives = 114/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAVDL+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVDLLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >sp|P95020|NUSB_MYCTU Tax_Id=1773 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium tuberculosis] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >sp|A5U5N2|NUSB_MYCTA Tax_Id=419947 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium tuberculosis] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >tr|C6DMG3|C6DMG3_MYCTK Tax_Id=478434 SubName: Full=N utilization substance protein B nusB;[Mycobacterium tuberculosis] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >tr|A5WQE1|A5WQE1_MYCTF Tax_Id=336982 SubName: Full=N utilization substance protein B nusB;[Mycobacterium tuberculosis] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >tr|A4KNW0|A4KNW0_MYCTU Tax_Id=395095 SubName: Full=N utilization substance protein nusB (Nusb protein);[Mycobacterium tuberculosis str. Haarlem] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >tr|A2VKP3|A2VKP3_MYCTU Tax_Id=348776 SubName: Full=N utilization substance protein nusB (Nusb protein);[Mycobacterium tuberculosis C] Length = 156 Score = 206 bits (523), Expect = 1e-51 Identities = 101/141 (71%), Positives = 113/141 (80%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 KPV+GRHQARKRAV L+FEAE RG+ E+ D R LAE KPD+A LHPYTAAVARG+ + Sbjct: 5 KPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSE 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 HAAHIDDLIT+HL+GWTLDRLPAVDRAILRV+VWELL+ LAKELST Sbjct: 65 HAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQ+ Sbjct: 125 DDSPGFVNGVLGQVMLVTPQL 145 >sp|Q9CCR9|NUSB_MYCLE Tax_Id=1769 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium leprae] Length = 190 Score = 194 bits (494), Expect = 2e-48 Identities = 97/140 (69%), Positives = 111/140 (79%) Query: 9 PVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQH 68 PVKGRHQARKRAVDL+FEAEAR L P EI ++R+ LA++K DVAPLHPYT VA+G+ +H Sbjct: 4 PVKGRHQARKRAVDLLFEAEARDLSPLEIIEVRSALAKSKLDVAPLHPYTVVVAQGVSEH 63 Query: 69 AAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTD 128 A ID+LI SHLQGW LDRLPAVDRAILRV++WELLY LAKELSTD Sbjct: 64 TARIDELIISHLQGWKLDRLPAVDRAILRVSIWELLYADDVPEPVAVDEAVELAKELSTD 123 Query: 129 DSPSFVNGVLGQVMLVTPQI 148 DSP FVNG+LG+VMLVTPQI Sbjct: 124 DSPGFVNGLLGKVMLVTPQI 143 >sp|B8ZUK7|NUSB_MYCLB Tax_Id=561304 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium leprae] Length = 190 Score = 194 bits (494), Expect = 2e-48 Identities = 97/140 (69%), Positives = 111/140 (79%) Query: 9 PVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQH 68 PVKGRHQARKRAVDL+FEAEAR L P EI ++R+ LA++K DVAPLHPYT VA+G+ +H Sbjct: 4 PVKGRHQARKRAVDLLFEAEARDLSPLEIIEVRSALAKSKLDVAPLHPYTVVVAQGVSEH 63 Query: 69 AAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTD 128 A ID+LI SHLQGW LDRLPAVDRAILRV++WELLY LAKELSTD Sbjct: 64 TARIDELIISHLQGWKLDRLPAVDRAILRVSIWELLYADDVPEPVAVDEAVELAKELSTD 123 Query: 129 DSPSFVNGVLGQVMLVTPQI 148 DSP FVNG+LG+VMLVTPQI Sbjct: 124 DSPGFVNGLLGKVMLVTPQI 143 >sp|A0QWR5|NUSB_MYCS2 Tax_Id=246196 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium smegmatis] Length = 160 Score = 193 bits (491), Expect = 5e-48 Identities = 98/138 (71%), Positives = 110/138 (79%) Query: 11 KGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAA 70 +GRHQARKRAVDL+FEAEARGL +AD R LAE + DVAPL+PYT VARG+ +HAA Sbjct: 8 RGRHQARKRAVDLLFEAEARGLTAEAVADSRAALAEDQDDVAPLNPYTVLVARGVTEHAA 67 Query: 71 HIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDS 130 HIDDLI++HLQGWTL+RLPAVDRAILRVAVWELL+ LAKELSTD+S Sbjct: 68 HIDDLISAHLQGWTLERLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKELSTDES 127 Query: 131 PSFVNGVLGQVMLVTPQI 148 P FVNGVLGQVMLVTPQI Sbjct: 128 PGFVNGVLGQVMLVTPQI 145 >sp|Q1B9G7|NUSB_MYCSS Tax_Id=164756 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium sp.] Length = 162 Score = 192 bits (488), Expect = 1e-47 Identities = 97/141 (68%), Positives = 109/141 (77%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 +P +GRHQARKRAVDL+FEAEARGL E+A R +LA T+PDV L+PYT VARG+ Sbjct: 5 RPDRGRHQARKRAVDLLFEAEARGLTAAEVATSRNKLAGTQPDVTALNPYTVTVARGVTD 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 H HIDDLI++HLQGWTLDRLPAVDRAILRVAVWELL+ LAK+LST Sbjct: 65 HRDHIDDLISAHLQGWTLDRLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKQLST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQI Sbjct: 125 DDSPGFVNGVLGQVMLVTPQI 145 >sp|A1UFJ6|NUSB_MYCSK Tax_Id=189918 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium sp.] Length = 162 Score = 192 bits (488), Expect = 1e-47 Identities = 97/141 (68%), Positives = 109/141 (77%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 +P +GRHQARKRAVDL+FEAEARGL E+A R +LA T+PDV L+PYT VARG+ Sbjct: 5 RPDRGRHQARKRAVDLLFEAEARGLTAAEVATSRNKLAGTQPDVTALNPYTVTVARGVTD 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 H HIDDLI++HLQGWTLDRLPAVDRAILRVAVWELL+ LAK+LST Sbjct: 65 HRDHIDDLISAHLQGWTLDRLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKQLST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQI Sbjct: 125 DDSPGFVNGVLGQVMLVTPQI 145 >sp|A3PZ57|NUSB_MYCSJ Tax_Id=164757 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium sp.] Length = 162 Score = 192 bits (488), Expect = 1e-47 Identities = 97/141 (68%), Positives = 109/141 (77%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 +P +GRHQARKRAVDL+FEAEARGL E+A R +LA T+PDV L+PYT VARG+ Sbjct: 5 RPDRGRHQARKRAVDLLFEAEARGLTAAEVATSRNKLAGTQPDVTALNPYTVTVARGVTD 64 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 H HIDDLI++HLQGWTLDRLPAVDRAILRVAVWELL+ LAK+LST Sbjct: 65 HRDHIDDLISAHLQGWTLDRLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKQLST 124 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNGVLGQVMLVTPQI Sbjct: 125 DDSPGFVNGVLGQVMLVTPQI 145 >sp|A4TBX3|NUSB_MYCGI Tax_Id=350054 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium gilvum] Length = 164 Score = 189 bits (480), Expect = 1e-46 Identities = 95/139 (68%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Query: 11 KGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAET-KPDVAPLHPYTAAVARGIDQHA 69 +GRHQARKRAVDL+FEAEARG+ E+A+ R LA+ D+APL+PYT VARG+ HA Sbjct: 8 RGRHQARKRAVDLLFEAEARGITAAEVAEARNALADNGADDIAPLNPYTVTVARGVTDHA 67 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 AHIDDLI++HLQGWTLDRLPAVDRA+LRVAVWELL+ LAK+LSTDD Sbjct: 68 AHIDDLISAHLQGWTLDRLPAVDRAVLRVAVWELLHAVDVPEPVAVDEAVELAKQLSTDD 127 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP FVNGVLGQVMLVTPQI Sbjct: 128 SPGFVNGVLGQVMLVTPQI 146 >sp|A1T8G0|NUSB_MYCVP Tax_Id=350058 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Mycobacterium vanbaalenii] Length = 163 Score = 186 bits (473), Expect = 6e-46 Identities = 95/139 (68%), Positives = 109/139 (78%), Gaps = 1/139 (0%) Query: 11 KGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPD-VAPLHPYTAAVARGIDQHA 69 +GRHQARKRAVDL+FEAEARG+ E+A+ R LAE + D +A L+PYT VA+G+ HA Sbjct: 8 RGRHQARKRAVDLLFEAEARGITAAEVAEARNALAEKRTDDIATLNPYTVTVAQGVTAHA 67 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 AHIDDLI++HLQGWTLDRLPAVDRAILRVAVWELL+ LAK+LSTDD Sbjct: 68 AHIDDLISAHLQGWTLDRLPAVDRAILRVAVWELLHAEDVPEPVAVDEAVELAKQLSTDD 127 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP FVNGVLGQVMLVTPQI Sbjct: 128 SPGFVNGVLGQVMLVTPQI 146 >tr|B1MCE4|B1MCE4_MYCA9 Tax_Id=561007 SubName: Full=Probable transcription antitermination factor NusB;[Mycobacterium abscessus] Length = 173 Score = 179 bits (453), Expect = 1e-43 Identities = 93/149 (62%), Positives = 110/149 (73%), Gaps = 2/149 (1%) Query: 2 PEGR--PGKPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTA 59 P GR G GR +ARKRAVDL+FEAEAR + +AD R LA +KPD+ PL+PYT Sbjct: 15 PPGRRVSGSAKGGRRKARKRAVDLLFEAEAREMTAAGVADERRALAASKPDIDPLNPYTV 74 Query: 60 AVARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXX 119 +VA G+ +HAAHID+LI+SHLQGWTL RLPAVDRAILRVAVWELL+ Sbjct: 75 SVAHGVTEHAAHIDELISSHLQGWTLARLPAVDRAILRVAVWELLHAQDVPEVVAVDEAV 134 Query: 120 XLAKELSTDDSPSFVNGVLGQVMLVTPQI 148 LAK+LSTD+SP+FVNGVLGQ+MLVTP I Sbjct: 135 ELAKQLSTDESPAFVNGVLGQLMLVTPHI 163 >sp|C1B4I5|NUSB_RHOOB Tax_Id=632772 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Rhodococcus opacus] Length = 169 Score = 153 bits (387), Expect = 6e-36 Identities = 76/141 (53%), Positives = 98/141 (69%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 K + RH+ARKRAVD +FEAEAR L P ++A R EL+ VAP+ PYT V G+ + Sbjct: 6 KKLGARHKARKRAVDFLFEAEARDLDPVDLATERAELSGKDDSVAPVAPYTVTVVTGVAE 65 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 + +D++I+SHLQ WTL+RLPAVDRAILR+AVWEL + LAK+LST Sbjct: 66 NLDRLDEVISSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLST 125 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 D+SP FVNG+LGQV+LV PQ+ Sbjct: 126 DESPGFVNGILGQVVLVAPQV 146 >sp|Q0S0M6|NUSB_RHOSR Tax_Id=101510 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Rhodococcus sp.] Length = 169 Score = 152 bits (385), Expect = 1e-35 Identities = 76/141 (53%), Positives = 97/141 (68%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 K + RH+ARKRAVD +FEAEAR L P ++A R EL+ VAP+ PYT V G+ + Sbjct: 6 KKLGARHKARKRAVDFLFEAEARDLDPVDLATERAELSGKDDSVAPVAPYTVTVVTGVAE 65 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 + +D++I SHLQ WTL+RLPAVDRAILR+AVWEL + LAK+LST Sbjct: 66 NLDRLDEVIRSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLST 125 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 D+SP FVNG+LGQV+LV PQ+ Sbjct: 126 DESPGFVNGILGQVVLVAPQV 146 >sp|Q5YTL2|NUSB_NOCFA Tax_Id=37329 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Nocardia farcinica] Length = 169 Score = 149 bits (375), Expect = 1e-34 Identities = 77/141 (54%), Positives = 92/141 (65%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 K + RH+AR+RAVDL+FEAEAR + ++ R +LA VAPLH YT + G+ Sbjct: 13 KKLGARHKARRRAVDLLFEAEARDVDAADLLTERADLATRDQSVAPLHAYTRTLVEGVAD 72 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 +D I S+LQ WTL RLPAVDRAILRVAVWEL + LAKELST Sbjct: 73 ELERVDGTIESYLQDWTLSRLPAVDRAILRVAVWELFHATDVPPVVAVDEAVELAKELST 132 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSPSFVNGVLGQV+LV PQ+ Sbjct: 133 DDSPSFVNGVLGQVVLVAPQV 153 >sp|C0ZZC1|NUSB_RHOE4 Tax_Id=234621 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Rhodococcus erythropolis] Length = 165 Score = 148 bits (374), Expect = 2e-34 Identities = 75/141 (53%), Positives = 96/141 (68%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 K + RH+ARKRAVD +FEAEAR L P +A R++L+ VAP+ YT + G+ + Sbjct: 6 KKLGARHKARKRAVDFLFEAEARDLDPVALASERSDLSVKDDAVAPVAAYTVTLVSGVAE 65 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 + ID +I+SHLQ WTL+RLPAVDRAILR+AVWEL + LAK+LST Sbjct: 66 NLDRIDQVISSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLST 125 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNG+LGQV+LV PQ+ Sbjct: 126 DDSPGFVNGILGQVVLVAPQV 146 >tr|C3JST1|C3JST1_RHOER Tax_Id=596309 (nusB)SubName: Full=Transcription antitermination factor NusB;[Rhodococcus erythropolis SK121] Length = 165 Score = 148 bits (374), Expect = 2e-34 Identities = 75/141 (53%), Positives = 96/141 (68%) Query: 8 KPVKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQ 67 K + RH+ARKRAVD +FEAEAR L P +A R++L+ VAP+ YT + G+ + Sbjct: 6 KKLGARHKARKRAVDFLFEAEARDLDPVALASERSDLSVKDDAVAPVAAYTVTLVSGVAE 65 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 + ID +I+SHLQ WTL+RLPAVDRAILR+AVWEL + LAK+LST Sbjct: 66 NLDRIDQVISSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLST 125 Query: 128 DDSPSFVNGVLGQVMLVTPQI 148 DDSP FVNG+LGQV+LV PQ+ Sbjct: 126 DDSPGFVNGILGQVVLVAPQV 146 >tr|C2ATL1|C2ATL1_TSUPA Tax_Id=521096 SubName: Full=NusB antitermination factor;[Tsukamurella paurometabola DSM 20162] Length = 165 Score = 137 bits (344), Expect = 6e-31 Identities = 77/148 (52%), Positives = 94/148 (63%), Gaps = 3/148 (2%) Query: 3 EGRPGKPVKGRHQARKRAVDLMFEAEARGLGP--GEIADLRTELAETKPDVAPLHPYTAA 60 E + K RH+ARKRAVDL+FE EARG+ G +A+ RT LA V P+ YTA Sbjct: 6 ENKRPKKSGARHRARKRAVDLLFEVEARGVTDVDGLLAERRT-LAADDASVPPVSEYTAQ 64 Query: 61 VARGIDQHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXX 120 + G+D +D +ITSHL GWTL RLPAVDRAILRVAVWEL Sbjct: 65 LVTGVDVDREQLDSVITSHLTGWTLARLPAVDRAILRVAVWELFNAPDVPPAVVVDEAVE 124 Query: 121 LAKELSTDDSPSFVNGVLGQVMLVTPQI 148 LAKELSTD+SPS++NGVLG+V + PQ+ Sbjct: 125 LAKELSTDESPSYLNGVLGKVATLAPQV 152 >tr|D0LCQ6|D0LCQ6_GORB4 Tax_Id=526226 SubName: Full=Transcription antitermination factor NusB;[Gordonia bronchialis] Length = 163 Score = 133 bits (334), Expect = 8e-30 Identities = 67/136 (49%), Positives = 87/136 (63%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 RH+AR+RAVD++FEAEA+ + P ++ R EL + V +H YTA V G+ I Sbjct: 7 RHKARRRAVDILFEAEAKQVSPAQLVAERRELVRSDESVGAIHDYTARVIEGLADDQEQI 66 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D +I+SHL+ WTL RLPAVDRAILR+A WEL LAKELSTDDSP+ Sbjct: 67 DSVISSHLREWTLPRLPAVDRAILRLATWELFNSVDVDTVVIVDEAVELAKELSTDDSPA 126 Query: 133 FVNGVLGQVMLVTPQI 148 FVNGVL ++ + PQ+ Sbjct: 127 FVNGVLAKIADLAPQV 142 >tr|C8XJK9|C8XJK9_NAKMY Tax_Id=479431 SubName: Full=NusB antitermination factor;[Nakamurella multipartita] Length = 144 Score = 123 bits (308), Expect = 9e-27 Identities = 66/142 (46%), Positives = 87/142 (61%), Gaps = 4/142 (2%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDV---APLHPYTAAVARGID 66 + R ++RKRA+D++F AEARG+ P + R E T PD P+ Y + RG Sbjct: 1 MSARSKSRKRALDVLFAAEARGVDPLVVLSERME-EPTGPDRHSWTPIGDYAEGLVRGFV 59 Query: 67 QHAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELS 126 +H +D L+ H +GWT+DR+PAVDRAILR+AV+ELLY AK LS Sbjct: 60 EHQDRVDTLLAEHSRGWTVDRMPAVDRAILRIAVYELLYSTEVPPAVVVNEAVDSAKILS 119 Query: 127 TDDSPSFVNGVLGQVMLVTPQI 148 TDDSP FVNGVLGQ+ +TPQ+ Sbjct: 120 TDDSPRFVNGVLGQIAAITPQL 141 >sp|C5C681|NUSB_BEUC1 Tax_Id=471853 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Beutenbergia cavernae] Length = 153 Score = 121 bits (304), Expect = 2e-26 Identities = 62/139 (44%), Positives = 86/139 (61%), Gaps = 5/139 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIAD-----LRTELAETKPDVAPLHPYTAAVARGIDQ 67 R +ARKRA+DL++EA+ + + G A L E T AP+ YT + G+ Sbjct: 4 RRKARKRALDLLYEADQKAVSGGAPASGDAVALLAERIATPHGEAPMREYTVEIVEGVAA 63 Query: 68 HAAHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELST 127 H A ID+L+ ++ QGW+L+R+PAVDRAILR+ VWELL+ LA ELST Sbjct: 64 HQARIDELLETYAQGWSLERMPAVDRAILRIGVWELLFNDDVPDAVAVDEAVALAAELST 123 Query: 128 DDSPSFVNGVLGQVMLVTP 146 DDSP+FVNG+LGQ++ + P Sbjct: 124 DDSPTFVNGLLGQLLRLAP 142 >tr|C6W8Z7|C6W8Z7_ACTMD Tax_Id=446462 SubName: Full=NusB antitermination factor;[Actinosynnema mirum] Length = 139 Score = 121 bits (303), Expect = 3e-26 Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 4/136 (2%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRAVD+++EA+ RG+ + L + T DV P++ YT ++ G+ H A I Sbjct: 4 RTKARKRAVDVIYEADQRGVDA--VTLLSDRVGST--DVPPINEYTVSLVEGVTAHRARI 59 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 DDLI+ H +GWTL R+PAVDRA+LRV ++ELL+ LAK LSTDDSP Sbjct: 60 DDLISEHSEGWTLQRMPAVDRAVLRVGLYELLWAADVPDAVAIDEAVELAKGLSTDDSPR 119 Query: 133 FVNGVLGQVMLVTPQI 148 FVNGVLG++ ++ Q+ Sbjct: 120 FVNGVLGRIAVIADQL 135 >tr|C1WUI7|C1WUI7_9ACTO Tax_Id=479435 SubName: Full=Transcription antitermination factor NusB;[Kribbella flavida DSM 17836] Length = 136 Score = 116 bits (291), Expect = 8e-25 Identities = 58/139 (41%), Positives = 91/139 (65%), Gaps = 5/139 (3%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHA 69 + R +ARKRA+D+++E+E RGL G L +A+ P P++ +T A+ G+ +H Sbjct: 1 MSARSKARKRALDVLYESEVRGLPVG--GTLADRVADNDP---PVNEFTVALVEGVAEHI 55 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 A IDDL+++H GWTLDR+PAVDR +LR+ V+ELL+ LA++LSTD+ Sbjct: 56 AAIDDLLSTHSVGWTLDRMPAVDRNVLRIGVYELLFDEQVPDVVAVSEAVALARDLSTDE 115 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP+FVNG+L +++ + P + Sbjct: 116 SPAFVNGLLARLLQLKPTL 134 >sp|Q47QY5|NUSB_THEFY Tax_Id=269800 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Thermobifida fusca] Length = 142 Score = 115 bits (287), Expect = 2e-24 Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 5/136 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 RH+AR RAV++++EAE RG+ E+ + R A+T+P P++ +T +A +D+H A I Sbjct: 10 RHKARVRAVEILYEAEVRGVPVSEVIERRR--AQTEP---PINEFTEQLATRVDEHRARI 64 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+L+ ++ GWTLDR+P VDR ILR+ V+ELL+ +AKELSTD+SP Sbjct: 65 DELLETYAIGWTLDRMPVVDRNILRIGVYELLWADDIPDGVAIAEAVAMAKELSTDESPV 124 Query: 133 FVNGVLGQVMLVTPQI 148 FVNG+L ++M P + Sbjct: 125 FVNGLLSRLMEKKPSL 140 >tr|C1RPY9|C1RPY9_9CELL Tax_Id=446466 SubName: Full=NusB antitermination factor;[Cellulomonas flavigena DSM 20109] Length = 138 Score = 114 bits (286), Expect = 3e-24 Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 3/136 (2%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRA+D++FEAE RGL ++A+L + A L Y + G+ +HA I Sbjct: 4 RTKARKRALDVLFEAEQRGL---DVAELLAKRVVEPGTEASLPQYAVELVEGVLEHAERI 60 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+L+ +H GWT+ R+PAVDRA+LR+ WE+L+ LA+ELSTD+SP+ Sbjct: 61 DELLATHSHGWTVARMPAVDRALLRLGAWEILWNDDVPDAVAVDEAVSLARELSTDESPA 120 Query: 133 FVNGVLGQVMLVTPQI 148 FVNG+LG+++++ P + Sbjct: 121 FVNGLLGRLVVLKPTL 136 >tr|C4EKZ6|C4EKZ6_STRRS Tax_Id=479432 SubName: Full=Transcription antitermination factor NusB;[Streptosporangium roseum DSM 43021] Length = 136 Score = 114 bits (284), Expect = 5e-24 Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 5/139 (3%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHA 69 + R +AR+RA+D++FEAEAR P + R E AE P++ YTA + G+ +H Sbjct: 1 MSARGKARRRALDILFEAEARSQDPLSVLAERLERAEP-----PVNEYTATIVEGVCRHR 55 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 A ID+LIT++ +GWTLDR+PAVDR +LR +ELL+ LA ELSTD+ Sbjct: 56 ARIDELITTYAEGWTLDRMPAVDRNLLRGGTYELLWMPDVPEGVVISEWVSLASELSTDE 115 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP FVNG++ + + P + Sbjct: 116 SPQFVNGLMARFKQLKPSL 134 >sp|A1SJD8|NUSB_NOCSJ Tax_Id=196162 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Nocardioides sp.] Length = 135 Score = 113 bits (283), Expect = 7e-24 Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 5/139 (3%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHA 69 + R +ARKRA+D++F ++ RG +A L +AE + P + YTA + RG+ +H Sbjct: 1 MSARSKARKRALDVLFASDVRG--EDAVAALDRAIAEGE---GPTNDYTATLVRGVVEHQ 55 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 A ID+L++S+ GW LDR+PAVDR +LR+ VWELLY L +LSTD+ Sbjct: 56 ARIDELLSSYSHGWALDRMPAVDRNVLRLGVWELLYADDVPDAVAVSEAMALVTDLSTDE 115 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP FVNG+LG ++ P + Sbjct: 116 SPQFVNGILGSIVRNKPSL 134 >sp|A0JX79|NUSB_ARTS2 Tax_Id=290399 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Arthrobacter sp.] Length = 136 Score = 112 bits (280), Expect = 2e-23 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 5/139 (3%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHA 69 + R +AR RA+D++FEAE R L ++ R E + ++PYT + G+ H Sbjct: 1 MSARGKARNRALDVLFEAEQRSLSAFDVLRSRREKTDQI-----VNPYTLEIVEGVVSHQ 55 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 A ID+ + ++ QGWTL+R+P+VDR ILR+ WELLY LAK LSTD+ Sbjct: 56 AAIDEFLETYSQGWTLERMPSVDRIILRIGTWELLYNDDVPDGVAVSEAVALAKTLSTDE 115 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SPSF+NG+LG++ + P + Sbjct: 116 SPSFINGLLGRLQQLKPSL 134 >tr|C0UA51|C0UA51_9ACTO Tax_Id=526225 SubName: Full=NusB antitermination factor;[Geodermatophilus obscurus DSM 43160] Length = 135 Score = 112 bits (279), Expect = 2e-23 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 5/130 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRAVD+++EA+ RG P E+ LR +A P P+ + + G+ +HAA + Sbjct: 4 RSKARKRAVDVLYEADLRGSDPLEL--LRERVALASP---PIPDHAVRLVEGVAEHAARV 58 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+LI H +GW++ RLP VDRAILR+AV+ELL+ LA+ LSTDDSP+ Sbjct: 59 DELIDRHARGWSIHRLPDVDRAILRMAVFELLWVDDVPDAVVIDEAVELARSLSTDDSPA 118 Query: 133 FVNGVLGQVM 142 +VNGVLG V+ Sbjct: 119 YVNGVLGGVL 128 >tr|C7R4C7|C7R4C7_JONDD Tax_Id=471856 SubName: Full=NusB antitermination factor;[Jonesia denitrificans] Length = 138 Score = 110 bits (276), Expect = 4e-23 Identities = 60/137 (43%), Positives = 86/137 (62%), Gaps = 5/137 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHP-YTAAVARGIDQHAAH 71 R +ARKRAV++++EA+ R L ++ D+R LA+ P V P Y + G+ H Sbjct: 4 RSKARKRAVNILYEADQRNLSAAQVLDIR--LAD--PGVPSALPQYAVDLVEGVILHRER 59 Query: 72 IDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSP 131 ID+++ ++ +GW L R+PAVDRAILR+ WELLY LA+ELST+DSP Sbjct: 60 IDEILETYSRGWPLRRMPAVDRAILRLGTWELLYNDDVPDIVAIDEAVDLARELSTEDSP 119 Query: 132 SFVNGVLGQVMLVTPQI 148 SFVNG+LG+VM + P + Sbjct: 120 SFVNGLLGRVMDIKPAL 136 >tr|D1BSN7|D1BSN7_9MICO Tax_Id=446471 SubName: Full=NusB antitermination factor;[Xylanimonas cellulosilytica DSM 15894] Length = 138 Score = 110 bits (275), Expect = 6e-23 Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 3/136 (2%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRA DL+FEAE R + L + ET +P+ Y A + G+ H I Sbjct: 4 RTKARKRAADLLFEAEQRRW---DAVRLLRDRIETPVSESPVPQYAADIVEGVVAHRERI 60 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+L+ ++ GWT++R+PAVDRA+LR+ WE+L+ LA +LSTDDSPS Sbjct: 61 DELLETYSNGWTIERMPAVDRALLRIGAWEILFNDDVPDAVAIDEAVDLAAQLSTDDSPS 120 Query: 133 FVNGVLGQVMLVTPQI 148 FVNG+LG+++ + P + Sbjct: 121 FVNGLLGRIVELKPTL 136 >sp|A6WCD3|NUSB_KINRD Tax_Id=266940 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Kineococcus radiotolerans] Length = 136 Score = 108 bits (271), Expect = 2e-22 Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 5/129 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRA++++FEA+ RGL P ++ L+ ++ P P+ Y V G+ +H A I Sbjct: 4 RRKARKRALEVLFEADQRGLAPLDV--LKDKILRADP---PVGEYAVTVVEGVVEHQARI 58 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D++++++ W LDR+PAVDRA+LR+ WE+LY +A+ELSTD+SP Sbjct: 59 DEVLSTYSMAWPLDRMPAVDRALLRIGTWEVLYAADVPDHVAVSEAVEIAQELSTDESPK 118 Query: 133 FVNGVLGQV 141 FVNG+L ++ Sbjct: 119 FVNGLLARI 127 >tr|C4RHP4|C4RHP4_9ACTO Tax_Id=219305 SubName: Full=Transcription antitermination factor nusB;[Micromonospora sp. ATCC 39149] Length = 136 Score = 107 bits (266), Expect = 6e-22 Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 2/129 (1%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +ARKRA+D++FEA+ R P E+ E E KP L Y + G+ H I Sbjct: 4 RRKARKRALDVLFEADLRDRPPVEVLAGYVERIE-KPHPEHLG-YAVGLVEGVAAHLGRI 61 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+LI S+ +GWTLDR+PAVDR + R+AV+ELLY LA+++STDDSP Sbjct: 62 DELIASYAEGWTLDRMPAVDRNLARIAVYELLYVDELDDAVAISEAVELARQMSTDDSPR 121 Query: 133 FVNGVLGQV 141 F+NGVLG++ Sbjct: 122 FLNGVLGRI 130 >tr|A9WSB5|A9WSB5_RENSM Tax_Id=288705 (nusB)SubName: Full=Transcription antitermination factor;[Renibacterium salmoninarum] Length = 143 Score = 106 bits (264), Expect = 1e-21 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 5/136 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +AR+RA+D++FEA R + E+ LR E + ++PY+ + G+ Q I Sbjct: 11 RSKARRRALDILFEAGQRDVSAAEVLKLRRERTDQI-----INPYSVDIIDGVGQKQEEI 65 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+ + ++ QGWTL+R+PAVD LR+ WELLY LAK+LSTD+SP Sbjct: 66 DEFLQTYAQGWTLERMPAVDLIALRIGAWELLYNDDVPDAVAVSEAVELAKQLSTDESPQ 125 Query: 133 FVNGVLGQVMLVTPQI 148 F+NG+LG++ + P + Sbjct: 126 FINGLLGRLQQLKPTL 141 >sp|A1R700|NUSB_ARTAT Tax_Id=290340 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Arthrobacter aurescens] Length = 136 Score = 105 bits (263), Expect = 1e-21 Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 5/139 (3%) Query: 10 VKGRHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHA 69 + R +AR RA++++FEAE R + + R E K D+ ++PYT + G+ Sbjct: 1 MSARGKARSRALEVLFEAEQRSVSAFDAMTARRE----KTDLV-INPYTVEIVEGVVSMQ 55 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 A ID+ + ++ QGWTL+R+P+VDR ILR+ WELLY LAK +STD+ Sbjct: 56 ATIDEFLQTYAQGWTLERMPSVDRIILRIGAWELLYNDEVPDGVAVSEAVALAKTMSTDE 115 Query: 130 SPSFVNGVLGQVMLVTPQI 148 SP+F+NG+LG++ + P + Sbjct: 116 SPAFINGLLGRLQKLKPSL 134 >tr|B2GI93|B2GI93_KOCRD Tax_Id=378753 (nusB)SubName: Full=Transcription antitermination protein NusB;[Kocuria rhizophila] Length = 138 Score = 105 bits (262), Expect = 2e-21 Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 5/136 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +AR RAV+++FEAE R + R E + + P++PYT + G+D+ I Sbjct: 5 RSKARVRAVEILFEAEQRNESVRDALVRRRENSSS-----PINPYTVEILEGVDERREDI 59 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+ + ++ QGW L R+PAVDR LRV WELLY + ++LSTDDSP Sbjct: 60 DEFLETYSQGWALGRMPAVDRNALRVGAWELLYNSEIPDGVAVAEAVAVTRQLSTDDSPR 119 Query: 133 FVNGVLGQVMLVTPQI 148 FVNG+LG++ V P + Sbjct: 120 FVNGLLGRLQKVKPSL 135 >sp|A8LY11|NUSB_SALAI Tax_Id=391037 (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein nusB;[Salinispora arenicola] Length = 136 Score = 105 bits (261), Expect = 2e-21 Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 4/130 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLH-PYTAAVARGIDQHAAH 71 R +ARKRA+D++FEA+ R P E+ E E KP P H Y + GI H Sbjct: 4 RRKARKRALDVLFEADLRDRPPVEVLAGYVERLE-KP--RPEHLGYAVGLVEGIAVHLDR 60 Query: 72 IDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSP 131 +D+LI S+ +GWTLDR+PAVDR + R+AV+ELLY LA+++STDDSP Sbjct: 61 LDELIASYAEGWTLDRMPAVDRNLARIAVYELLYVDEIDDAVAISEAVELARQMSTDDSP 120 Query: 132 SFVNGVLGQV 141 F+NG+LG++ Sbjct: 121 RFLNGILGRI 130 >tr|C7PVS0|C7PVS0_CATAD Tax_Id=479433 SubName: Full=NusB antitermination factor;[Catenulispora acidiphila] Length = 145 Score = 105 bits (261), Expect = 2e-21 Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEI-ADLRTELAETKPD--VAPLHPYTAAVARGIDQHA 69 R +AR+RA++++FEA+ RG+ P + AD + + P+ + + PY A + G+ +H Sbjct: 5 RSKARQRALEILFEADLRGVDPRTVLADTQARIRAQGPEGTIPQVQPYAATLVEGVLEHV 64 Query: 70 AHIDDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDD 129 IDDL+ H +GW LDR+P VDR +LR+ V+ELL+ LA+ +STD+ Sbjct: 65 DKIDDLLDEHSEGWALDRMPTVDRNVLRIGVYELLWQSDVPDAVVLDEAVSLARLMSTDE 124 Query: 130 SPSFVNGVLGQV 141 SP FVNG+L ++ Sbjct: 125 SPQFVNGLLARI 136 >tr|C7MSI9|C7MSI9_SACVD Tax_Id=471857 SubName: Full=Transcription antitermination factor NusB;[Saccharomonospora viridis] Length = 153 Score = 104 bits (260), Expect = 3e-21 Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 4/136 (2%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R +R+RAV+L++EA R P + R PDV P+ YT + G+ ++ I Sbjct: 18 RRASRQRAVELLYEAALRKTDPATLMSERLG----SPDVDPISDYTITLVEGVSENRERI 73 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+L+ + QGW+L+R+P VD A+LRV ++ELL+ +AK+LSTDDSP Sbjct: 74 DELLAEYAQGWSLERMPPVDLAVLRVGLYELLWLDDVPDPVAIDEAVGIAKQLSTDDSPR 133 Query: 133 FVNGVLGQVMLVTPQI 148 FVNGVLG++ V ++ Sbjct: 134 FVNGVLGRIGTVAERL 149 >tr|C5CCF7|C5CCF7_MICLC Tax_Id=465515 SubName: Full=Transcription antitermination factor NusB;[Micrococcus luteus] Length = 150 Score = 104 bits (259), Expect = 4e-21 Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 5/136 (3%) Query: 13 RHQARKRAVDLMFEAEARGLGPGEIADLRTELAETKPDVAPLHPYTAAVARGIDQHAAHI 72 R ++R+RAV+++FEAE RG E R E + + ++ YT + G+ + Sbjct: 18 RSRSRQRAVEILFEAEQRGSTVSEGIRTRRESTDLQ-----VNAYTQRLVEGVIADQERL 72 Query: 73 DDLITSHLQGWTLDRLPAVDRAILRVAVWELLYXXXXXXXXXXXXXXXLAKELSTDDSPS 132 D+ ++S+ +GW+LDR+PAVDRAILRV WELL+ LA +LSTDDSP Sbjct: 73 DEALSSYSRGWSLDRMPAVDRAILRVGAWELLFQDDVPDAVAISEAVALAAQLSTDDSPE 132 Query: 133 FVNGVLGQVMLVTPQI 148 FVNG+LG++ V P + Sbjct: 133 FVNGLLGRLQQVKPTL 148 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.317 0.135 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,117,420,669 Number of extensions: 38289490 Number of successful extensions: 94417 Number of sequences better than 10.0: 1465 Number of HSP's gapped: 94558 Number of HSP's successfully gapped: 1465 Length of query: 173 Length of database: 3,846,993,858 Length adjustment: 128 Effective length of query: 45 Effective length of database: 2,403,767,874 Effective search space: 108169554330 Effective search space used: 108169554330 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 75 (33.5 bits)