BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2183 (135 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HND4|B2HND4_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 231 2e-59 tr|A0PPH8|A0PPH8_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 230 4e-59 tr|Q7TYC9|Q7TYC9_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 178 2e-43 tr|P95021|P95021_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 178 2e-43 tr|C6DMG4|C6DMG4_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 178 2e-43 tr|C1AF00|C1AF00_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 178 2e-43 tr|A5U5N1|A5U5N1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 178 2e-43 tr|A1KLM9|A1KLM9_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 178 2e-43 tr|A5WQE0|A5WQE0_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 178 2e-43 tr|A4KNV9|A4KNV9_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 178 2e-43 tr|A2VKP2|A2VKP2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 178 2e-43 tr|A0QI53|A0QI53_MYCA1 Tax_Id=243243 SubName: Full=N utilization... 170 5e-41 tr|Q741J1|Q741J1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 168 2e-40 tr|A4TGE6|A4TGE6_MYCGI Tax_Id=350054 SubName: Full=Copper resist... 36 1.2 tr|A4TGB5|A4TGB5_MYCGI Tax_Id=350054 SubName: Full=Copper resist... 36 1.2 tr|A1UPV3|A1UPV3_MYCSK Tax_Id=189918 SubName: Full=Copper resist... 36 1.2 tr|A5VFR4|A5VFR4_SPHWW Tax_Id=392499 SubName: Full=Putative unch... 36 1.6 tr|C7MH56|C7MH56_BRAFD Tax_Id=446465 SubName: Full=Major Facilit... 36 1.6 tr|A1TBC8|A1TBC8_MYCVP Tax_Id=350058 SubName: Full=Copper resist... 35 3.5 tr|B5JDZ5|B5JDZ5_9BACT Tax_Id=382464 SubName: Full=Predicted per... 35 3.5 tr|C1VDZ2|C1VDZ2_9EURY Tax_Id=469382 SubName: Full=Nitric oxide ... 34 4.6 tr|A0QDD3|A0QDD3_MYCA1 Tax_Id=243243 SubName: Full=ABC-type tran... 34 6.0 tr|A9GW18|A9GW18_9RHOB Tax_Id=391595 SubName: Full=Putative unch... 34 6.0 tr|Q73XL2|Q73XL2_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 33 7.8 tr|B9L178|B9L178_THERP Tax_Id=309801 SubName: Full=Nadh dehydrog... 33 7.8 >tr|B2HND4|B2HND4_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical secreted protein;[Mycobacterium marinum] Length = 135 Score = 231 bits (589), Expect = 2e-59 Identities = 119/135 (88%), Positives = 119/135 (88%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 MSRLELR ICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR Sbjct: 1 MSRLELRVVVAAWMAAAVILGAVICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG 120 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG Sbjct: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG 120 Query: 121 RGNRRVVDSDDEFEA 135 RGNRRVVDSDDEFEA Sbjct: 121 RGNRRVVDSDDEFEA 135 >tr|A0PPH8|A0PPH8_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical secreted protein;[Mycobacterium ulcerans] Length = 137 Score = 230 bits (586), Expect = 4e-59 Identities = 118/135 (87%), Positives = 119/135 (88%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 MSRLELR ICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR Sbjct: 3 MSRLELRVVVAAWMAAAVILGAVICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 62 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG 120 ISTVRTAARPLQPLLPVMAAIMGLTQAVVR+LGDVTDLPARRWELPQFPQLPVLRWVDSG Sbjct: 63 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRALGDVTDLPARRWELPQFPQLPVLRWVDSG 122 Query: 121 RGNRRVVDSDDEFEA 135 RGNRRVVDSDDEFEA Sbjct: 123 RGNRRVVDSDDEFEA 137 >tr|Q7TYC9|Q7TYC9_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb2561c;[Mycobacterium bovis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|P95021|P95021_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|C6DMG4|C6DMG4_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 134 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 2 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 61 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 62 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 118 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 119 GNRANRRIADSDD 131 >tr|C1AF00|C1AF00_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A5U5N1|A5U5N1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A1KLM9|A1KLM9_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2554c;[Mycobacterium bovis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A5WQE0|A5WQE0_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A4KNV9|A4KNV9_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A2VKP2|A2VKP2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 133 Score = 178 bits (452), Expect = 2e-43 Identities = 97/133 (72%), Positives = 105/133 (78%), Gaps = 5/133 (3%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAYG IVASA+SIYALGVGAWLYH++ERLILARR Sbjct: 1 MTRLELRVVVAAVLAATVVLGAVVCAAYGLTIVASAMSIYALGVGAWLYHAIERLILARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDS- 119 ISTVRTAA+PLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARR EL QLPVLRWVD+ Sbjct: 61 ISTVRTAAKPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRREL---SQLPVLRWVDNS 117 Query: 120 -GRGNRRVVDSDD 131 R NRR+ DSDD Sbjct: 118 GNRANRRIADSDD 130 >tr|A0QI53|A0QI53_MYCA1 Tax_Id=243243 SubName: Full=N utilization substance protein B;[Mycobacterium avium] Length = 129 Score = 170 bits (430), Expect = 5e-41 Identities = 89/132 (67%), Positives = 100/132 (75%), Gaps = 6/132 (4%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAY +IVAS L+I+ALGVGAWLYH VER+ +ARR Sbjct: 1 MTRLELRLVVAAVLAATVVVGAVVCAAYHLSIVASVLAIHALGVGAWLYHCVERVAVARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG 120 ISTVR+AA PL+PLLPVMAAIMGLTQ VVRSL DVT+LPARRWE LPVLRWVD G Sbjct: 61 ISTVRSAATPLRPLLPVMAAIMGLTQGVVRSLSDVTELPARRWE------LPVLRWVDGG 114 Query: 121 RGNRRVVDSDDE 132 RGNRRV+D DDE Sbjct: 115 RGNRRVIDGDDE 126 >tr|Q741J1|Q741J1_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 129 Score = 168 bits (426), Expect = 2e-40 Identities = 88/132 (66%), Positives = 99/132 (75%), Gaps = 6/132 (4%) Query: 1 MSRLELRXXXXXXXXXXXXXXXXICAAYGWAIVASALSIYALGVGAWLYHSVERLILARR 60 M+RLELR +CAAY +IVAS L+I+ALGVGAWLYH VER+ +ARR Sbjct: 1 MTRLELRLVVAAVLAATVVVGAVVCAAYHLSIVASVLAIHALGVGAWLYHCVERVAVARR 60 Query: 61 ISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVLRWVDSG 120 ISTVR+AA PL+PLLPVMAAIMGLTQ VVRSL DVT+LP RRWE LPVLRWVD G Sbjct: 61 ISTVRSAATPLRPLLPVMAAIMGLTQGVVRSLSDVTELPVRRWE------LPVLRWVDGG 114 Query: 121 RGNRRVVDSDDE 132 RGNRRV+D DDE Sbjct: 115 RGNRRVIDGDDE 126 >tr|A4TGE6|A4TGE6_MYCGI Tax_Id=350054 SubName: Full=Copper resistance D domain protein; Flags: Precursor;[Mycobacterium gilvum] Length = 641 Score = 36.2 bits (82), Expect = 1.2 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 26 AAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLT 85 ++YG +VA ++ LGV W + L R T+ RPL L AA+ G+ Sbjct: 269 SSYGLLLVAKVTALVGLGVIGWRQRQTSIVALQRD----PTSRRPLLRLALTEAALFGVA 324 Query: 86 QAVVRSLGDVTDLPARRWELP 106 V LG PA R LP Sbjct: 325 IGVAVGLGRTPPPPATREPLP 345 >tr|A4TGB5|A4TGB5_MYCGI Tax_Id=350054 SubName: Full=Copper resistance D domain protein; Flags: Precursor;[Mycobacterium gilvum] Length = 637 Score = 36.2 bits (82), Expect = 1.2 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 26 AAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLT 85 ++YG +VA ++ LGV W + L R T+ RPL L AA+ G+ Sbjct: 269 SSYGLLLVAKVTALVGLGVIGWRQRQTSIVALQRD----PTSRRPLLRLALTEAALFGVA 324 Query: 86 QAVVRSLGDVTDLPARRWELP 106 V LG PA R LP Sbjct: 325 IGVAVGLGRTPPPPATREPLP 345 >tr|A1UPV3|A1UPV3_MYCSK Tax_Id=189918 SubName: Full=Copper resistance D domain protein; Flags: Precursor;[Mycobacterium sp.] Length = 641 Score = 36.2 bits (82), Expect = 1.2 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 26 AAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLT 85 ++YG +VA ++ LGV W + L R T+ RPL L AA+ G+ Sbjct: 269 SSYGLLLVAKVTALVGLGVIGWRQRQTSIVALQRD----PTSRRPLLRLALTEAALFGVA 324 Query: 86 QAVVRSLGDVTDLPARRWELP 106 V LG PA R LP Sbjct: 325 IGVAVGLGRTPPPPATREPLP 345 >tr|A5VFR4|A5VFR4_SPHWW Tax_Id=392499 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Sphingomonas wittichii] Length = 872 Score = 35.8 bits (81), Expect = 1.6 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Query: 31 AIVASALSIY----ALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLTQ 86 A++A L Y ALG+ A + H + L R I+ VR A L PLL +A+ +G Sbjct: 289 ALIAYRLIYYLLPLALGIVALVLHEGRQRRLGRAIAGVRLVANGLAPLLMGVASFLG--G 346 Query: 87 AVVRSLGDVTDLPARRWELPQFPQLPVL 114 AV+ G +PAR L LP + Sbjct: 347 AVLLLSGSTPAVPARLHTLHAIVPLPFI 374 >tr|C7MH56|C7MH56_BRAFD Tax_Id=446465 SubName: Full=Major Facilitator Superfamily transporter;[Brachybacterium faecium] Length = 460 Score = 35.8 bits (81), Expect = 1.6 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 11/85 (12%) Query: 39 IYALGVGAWLYHSVERLILARRISTVRTAARPLQPL-LPVMAAIMGLTQAVVRSL-GDVT 96 ++AL G WL L+L R+ T+ PL PL +PV+ + + QA+V +L G ++ Sbjct: 264 VFALMTGLWLLTYTTVLLLTERL----TSDAPLAPLAVPVVMGLASVAQALVMALAGHLS 319 Query: 97 DLPARR-----WELPQFPQLPVLRW 116 L RR W PVL W Sbjct: 320 TLTGRRRLLMLWGASAMVAGPVLWW 344 >tr|A1TBC8|A1TBC8_MYCVP Tax_Id=350058 SubName: Full=Copper resistance D domain protein; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 642 Score = 34.7 bits (78), Expect = 3.5 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Query: 26 AAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLT 85 ++YG +V ++ LGV W + L R TA RPL L AA+ G+ Sbjct: 269 SSYGLLVVGKVTALAGLGVIGWRQRRSSIVALQRD----PTARRPLLRLALTEAALFGVA 324 Query: 86 QAVVRSLGDVTDLPARRWELP 106 V LG PA R LP Sbjct: 325 IGVAVGLGRTPPPPATREPLP 345 >tr|B5JDZ5|B5JDZ5_9BACT Tax_Id=382464 SubName: Full=Predicted permease superfamily;[Verrucomicrobiae bacterium DG1235] Length = 434 Score = 34.7 bits (78), Expect = 3.5 Identities = 17/74 (22%), Positives = 32/74 (43%) Query: 30 WAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLTQAVV 89 W +VA+ S++AL + W + +L L P QP+ P + +GL Sbjct: 229 WLLVAALASVFALQLWHWYTLPITKLSLVAAAILATVLLVPAQPMWPFLVGTLGLAWITA 288 Query: 90 RSLGDVTDLPARRW 103 + G+ + ++ W Sbjct: 289 GAEGEAGEWFSQTW 302 >tr|C1VDZ2|C1VDZ2_9EURY Tax_Id=469382 SubName: Full=Nitric oxide reductase large subunit; Flags: Fragment;[Halogeometricum borinquense DSM 11551] Length = 716 Score = 34.3 bits (77), Expect = 4.6 Identities = 11/24 (45%), Positives = 19/24 (79%) Query: 30 WAIVASALSIYALGVGAWLYHSVE 53 W++++ L + A+G+G WLY+SVE Sbjct: 226 WSVISMVLLVAAVGIGVWLYNSVE 249 >tr|A0QDD3|A0QDD3_MYCA1 Tax_Id=243243 SubName: Full=ABC-type transporter, permease components;[Mycobacterium avium] Length = 689 Score = 33.9 bits (76), Expect = 6.0 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 24 ICAAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMG 83 + YG ++A A ++ LG W V L + +ST+ A R L L + AA+ G Sbjct: 280 LATGYGRLVLAKAAALCLLGGVGWRQRRVNVAAL-QAVSTLARARRALLRLTLIEAALFG 338 Query: 84 LTQAVVRSLGDVTDLP 99 LT + LG P Sbjct: 339 LTFGIAVGLGRTAPPP 354 >tr|A9GW18|A9GW18_9RHOB Tax_Id=391595 SubName: Full=Putative uncharacterized protein;[Roseobacter litoralis Och 149] Length = 382 Score = 33.9 bits (76), Expect = 6.0 Identities = 21/49 (42%), Positives = 26/49 (53%) Query: 66 TAARPLQPLLPVMAAIMGLTQAVVRSLGDVTDLPARRWELPQFPQLPVL 114 TAA P P LP + I GL + + L D+ DLP ELP +LP L Sbjct: 331 TAAVPDLPDLPDLPEIEGLDEIGLPDLPDLPDLPDLDGELPDLGELPKL 379 >tr|Q73XL2|Q73XL2_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 689 Score = 33.5 bits (75), Expect = 7.8 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 24 ICAAYGWAIVASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMG 83 + YG ++A A ++ LG W V L + +ST+ A R L L + AA+ G Sbjct: 280 LATGYGRLVLAKAAALCLLGGVGWRQRRVNVAAL-QAVSTLARARRALLRLTLIEAALFG 338 Query: 84 LTQAVVRSLG 93 LT + LG Sbjct: 339 LTFGIAVGLG 348 >tr|B9L178|B9L178_THERP Tax_Id=309801 SubName: Full=Nadh dehydrogenase chain n;[Thermomicrobium roseum] Length = 495 Score = 33.5 bits (75), Expect = 7.8 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 34 ASALSIYALGVGAWLYHSVERLILARRISTVRTAARPLQPLLPVMAAIMGLTQAVVRSLG 93 ASA+ IY + AW+Y S ++L T+RT P QPL P A ++ L V Sbjct: 175 ASAILIYGM---AWVYGSTGSIVLRDIAETLRTVVMPGQPLDP--ALLLALLLLAVGLGF 229 Query: 94 DVTDLPARRW 103 + +P W Sbjct: 230 KIAAVPFHMW 239 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.325 0.137 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 861,633,302 Number of extensions: 29945308 Number of successful extensions: 111170 Number of sequences better than 10.0: 25 Number of HSP's gapped: 111921 Number of HSP's successfully gapped: 25 Length of query: 135 Length of database: 3,846,993,858 Length adjustment: 100 Effective length of query: 35 Effective length of database: 2,719,473,558 Effective search space: 95181574530 Effective search space used: 95181574530 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 75 (33.5 bits)