BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2238 (269 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HP83|B2HP83_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 113 2e-23 tr|A0PPN1|A0PPN1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 113 2e-23 tr|Q8VK21|Q8VK21_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 50 3e-04 tr|A5WMB7|A5WMB7_MYCTF Tax_Id=336982 SubName: Full=Conserved pro... 50 3e-04 tr|A4KGY8|A4KGY8_MYCTU Tax_Id=395095 SubName: Full=Conserved pro... 50 3e-04 tr|Q73TA7|Q73TA7_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 50 3e-04 tr|A0QM21|A0QM21_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 48 0.001 tr|Q7U029|Q7U029_MYCBO Tax_Id=1765 SubName: Full=Probable conser... 45 0.009 tr|O06823|O06823_MYCTU Tax_Id=1773 SubName: Full=Probable conser... 45 0.009 tr|C1AN80|C1AN80_MYCBT Tax_Id=561275 SubName: Full=Putative prol... 45 0.009 tr|A5U2D7|A5U2D7_MYCTA Tax_Id=419947 SubName: Full=Putative cons... 45 0.009 tr|A1KIM4|A1KIM4_MYCBP Tax_Id=410289 SubName: Full=Probable cons... 45 0.009 tr|A2VHW1|A2VHW1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 45 0.009 tr|C6DTE9|C6DTE9_MYCTK Tax_Id=478434 SubName: Full=Predicted pro... 44 0.025 tr|O52052|O52052_MYCTU Tax_Id=1773 SubName: Full=PGB14TC-V; Flag... 38 1.0 >tr|B2HP83|B2HP83_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 269 Score = 113 bits (283), Expect = 2e-23 Identities = 65/118 (55%), Positives = 66/118 (55%) Query: 1 VLLHQLIAEVPGANKEESALMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYAC 60 +LLHQLIAEVPGANKEESALMTIFDRFNFK SPQAAAVPLKTDGYAC Sbjct: 1 MLLHQLIAEVPGANKEESALMTIFDRFNFKVVACAGLCGAAIALSPQAAAVPLKTDGYAC 60 Query: 61 IQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIPVL 118 IQ INDMAGVPMAVPGPIPVL Sbjct: 61 IQGMAGEGGAPAAGGPAAAGGPAAAGGPAAAGATCAASAPINDMAGVPMAVPGPIPVL 118 >tr|A0PPN1|A0PPN1_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 205 Score = 113 bits (283), Expect = 2e-23 Identities = 65/118 (55%), Positives = 66/118 (55%) Query: 1 VLLHQLIAEVPGANKEESALMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYAC 60 +LLHQLIAEVPGANKEESALMTIFDRFNFK SPQAAAVPLKTDGYAC Sbjct: 1 MLLHQLIAEVPGANKEESALMTIFDRFNFKVVACAGLCGAAIALSPQAAAVPLKTDGYAC 60 Query: 61 IQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIPVL 118 IQ INDMAGVPMAVPGPIPVL Sbjct: 61 IQGMAGEGGAPAAGGPAAAGGPAAAGGPAAAGATCAASAPINDMAGVPMAVPGPIPVL 118 >tr|Q8VK21|Q8VK21_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 220 Score = 50.1 bits (118), Expect = 3e-04 Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 13 ANKEESALMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXX 72 AN+ E LM I +RFN K SP AAA PL T GYACIQ Sbjct: 7 ANRGELTLMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ---------- 56 Query: 73 XXXXXXXXXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 57 GMAGDAPVAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 100 >tr|A5WMB7|A5WMB7_MYCTF Tax_Id=336982 SubName: Full=Conserved proline, glycine, valine-rich secreted protein;[Mycobacterium tuberculosis] Length = 220 Score = 50.1 bits (118), Expect = 3e-04 Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 13 ANKEESALMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXX 72 AN+ E LM I +RFN K SP AAA PL T GYACIQ Sbjct: 7 ANRGELTLMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ---------- 56 Query: 73 XXXXXXXXXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 57 GMAGDAPVAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 100 >tr|A4KGY8|A4KGY8_MYCTU Tax_Id=395095 SubName: Full=Conserved proline, glycine, valine-rich secreted protein;[Mycobacterium tuberculosis str. Haarlem] Length = 220 Score = 50.1 bits (118), Expect = 3e-04 Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 13 ANKEESALMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXX 72 AN+ E LM I +RFN K SP AAA PL T GYACIQ Sbjct: 7 ANRGELTLMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ---------- 56 Query: 73 XXXXXXXXXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 57 GMAGDAPVAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 100 >tr|Q73TA7|Q73TA7_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 183 Score = 49.7 bits (117), Expect = 3e-04 Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 2/98 (2%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I DRFN K SP AAA PL T G+ACIQ Sbjct: 3 LMAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQ--GQSGEVAPAAGGPVA 60 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIPV 117 + DM+GVPMAVPGP+P+ Sbjct: 61 GGAPAAGGAVAAGATDMCAAPLTDMSGVPMAVPGPVPL 98 >tr|A0QM21|A0QM21_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 180 Score = 48.1 bits (113), Expect = 0.001 Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Query: 21 MTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXXX 80 M I DRFN K SP AAA PL T G+ACIQ Sbjct: 1 MAIVDRFNMKVVASAGLCGAAIALSPDAAAAPLITGGHACIQ--GQSGEVAPAAGGPVAG 58 Query: 81 XXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIPV 117 + DM+GVPMAVPGP+P+ Sbjct: 59 GAPAAGGAVAAGATDMCAAPLTDMSGVPMAVPGPVPL 95 >tr|Q7U029|Q7U029_MYCBO Tax_Id=1765 SubName: Full=Probable conserved Proline, Glycine, Valine-rich secreted protein;[Mycobacterium bovis] Length = 209 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAATGACSAALTDMAGVPFVAPGPVP 89 >tr|O06823|O06823_MYCTU Tax_Id=1773 SubName: Full=Probable conserved Proline, Glycine, Valine-rich secreted protein;[Mycobacterium tuberculosis] Length = 202 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 89 >tr|C1AN80|C1AN80_MYCBT Tax_Id=561275 SubName: Full=Putative proline, glycine, valine-rich secreted protein;[Mycobacterium bovis] Length = 209 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAATGACSAALTDMAGVPFVAPGPVP 89 >tr|A5U2D7|A5U2D7_MYCTA Tax_Id=419947 SubName: Full=Putative conserved proline,glycine and valine rich secreted protein;[Mycobacterium tuberculosis] Length = 202 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 89 >tr|A1KIM4|A1KIM4_MYCBP Tax_Id=410289 SubName: Full=Probable conserved Proline, Glycine, Valine-rich secreted protein;[Mycobacterium bovis] Length = 209 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAATGACSAALTDMAGVPFVAPGPVP 89 >tr|A2VHW1|A2VHW1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 209 Score = 45.1 bits (105), Expect = 0.009 Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 10/97 (10%) Query: 20 LMTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXX 79 LM I +RFN K SP AAA PL T GYACIQ Sbjct: 3 LMAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAP 52 Query: 80 XXXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 53 VAAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 89 >tr|C6DTE9|C6DTE9_MYCTK Tax_Id=478434 SubName: Full=Predicted protein;[Mycobacterium tuberculosis] Length = 206 Score = 43.5 bits (101), Expect = 0.025 Identities = 30/96 (31%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 21 MTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXXX 80 M I +RFN K SP AAA PL T GYACIQ Sbjct: 1 MAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAPV 50 Query: 81 XXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIP 116 + DMAGVP PGP+P Sbjct: 51 AAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGPVP 86 >tr|O52052|O52052_MYCTU Tax_Id=1773 SubName: Full=PGB14TC-V; Flags: Precursor; Fragment;[Mycobacterium tuberculosis] Length = 87 Score = 38.1 bits (87), Expect = 1.0 Identities = 29/97 (29%), Positives = 32/97 (32%), Gaps = 10/97 (10%) Query: 21 MTIFDRFNFKXXXXXXXXXXXXXXSPQAAAVPLKTDGYACIQXXXXXXXXXXXXXXXXXX 80 M I +RFN K SP AAA PL T GYACIQ Sbjct: 1 MAIVNRFNIKVIAGAGLFAAAIALSPDAAADPLMTGGYACIQ----------GMAGDAPV 50 Query: 81 XXXXXXXXXXXXXXXXXXXXINDMAGVPMAVPGPIPV 117 + DMAGVP PG P+ Sbjct: 51 AAGDPVAAGGPAAAGACSAALTDMAGVPFVAPGGDPL 87 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.320 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 582,563,618 Number of extensions: 7936491 Number of successful extensions: 8028 Number of sequences better than 10.0: 15 Number of HSP's gapped: 8026 Number of HSP's successfully gapped: 15 Length of query: 269 Length of database: 3,846,993,858 Length adjustment: 135 Effective length of query: 134 Effective length of database: 2,324,841,453 Effective search space: 311528754702 Effective search space used: 311528754702 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 79 (35.0 bits)