BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2359 (470 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HQ65|B2HQ65_MYCMM Tax_Id=216594 (dinP_1)SubName: Full=DNA p... 852 0.0 tr|A0PNX8|A0PNX8_MYCUA Tax_Id=362242 (dinP_1)SubName: Full=DNA p... 845 0.0 sp|P63985|DPO41_MYCTU Tax_Id=1773 (dinB1)RecName: Full=DNA polym... 694 0.0 sp|P63986|DPO41_MYCBO Tax_Id=1765 (dinB1)RecName: Full=DNA polym... 694 0.0 tr|A4KH83|A4KH83_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 694 0.0 tr|A2VI54|A2VI54_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 694 0.0 tr|C6DSQ5|C6DSQ5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 692 0.0 tr|C1ANH3|C1ANH3_MYCBT Tax_Id=561275 (dinX)SubName: Full=DNA pol... 683 0.0 tr|A5U2P4|A5U2P4_MYCTA Tax_Id=419947 (dinX)SubName: Full=DNA pol... 683 0.0 tr|A1KIW7|A1KIW7_MYCBP Tax_Id=410289 (dinX)SubName: Full=Probabl... 683 0.0 tr|A5WMM4|A5WMM4_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 681 0.0 tr|Q740U4|Q740U4_MYCPA Tax_Id=1770 (dinX)SubName: Full=DinX;[Myc... 664 0.0 tr|A0QHM7|A0QHM7_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 651 0.0 tr|Q1B7D2|Q1B7D2_MYCSS Tax_Id=164756 SubName: Full=DNA-directed ... 622 e-176 tr|A1UHP1|A1UHP1_MYCSK Tax_Id=189918 SubName: Full=DNA-directed ... 622 e-176 tr|A3Q167|A3Q167_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed ... 620 e-175 tr|A0QX48|A0QX48_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 613 e-173 tr|A1T8S8|A1T8S8_MYCVP Tax_Id=350058 SubName: Full=DNA-directed ... 612 e-173 tr|A4T9J7|A4T9J7_MYCGI Tax_Id=350054 SubName: Full=DNA-directed ... 607 e-171 tr|B1MC11|B1MC11_MYCA9 Tax_Id=561007 SubName: Full=DNA polymeras... 575 e-162 tr|Q5YYW6|Q5YYW6_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 524 e-147 tr|C2ATR0|C2ATR0_TSUPA Tax_Id=521096 SubName: Full=Nucleotidyltr... 509 e-142 tr|Q0SHT2|Q0SHT2_RHOSR Tax_Id=101510 SubName: Full=DNA polymeras... 507 e-141 tr|C1AU44|C1AU44_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA pol... 506 e-141 tr|D0LAR7|D0LAR7_GORB4 Tax_Id=526226 SubName: Full=DNA-directed ... 492 e-137 tr|C1A0W3|C1A0W3_RHOE4 Tax_Id=234621 (dinB)SubName: Full=DNA pol... 485 e-135 tr|C3JJ35|C3JJ35_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 481 e-133 tr|C0XS17|C0XS17_9CORY Tax_Id=525263 (dinB)SubName: Full=DNA pol... 441 e-121 sp|A4QFK8|DPO4_CORGB Tax_Id=340322 (dinB)RecName: Full=DNA polym... 427 e-117 sp|Q8NNP4|DPO4_CORGL Tax_Id=1718 (dinB)RecName: Full=DNA polymer... 424 e-117 tr|C4LI62|C4LI62_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras... 424 e-117 tr|C6RAV1|C6RAV1_9CORY Tax_Id=553206 SubName: Full=DNA polymeras... 423 e-116 tr|C2BNK8|C2BNK8_9CORY Tax_Id=525264 (dinB)SubName: Full=DNA pol... 422 e-116 tr|Q8FNV3|Q8FNV3_COREF Tax_Id=152794 SubName: Full=Putative DNA-... 420 e-115 tr|C8NPZ9|C8NPZ9_COREF Tax_Id=196164 SubName: Full=DNA polymeras... 420 e-115 tr|C2GKM3|C2GKM3_9CORY Tax_Id=548478 (dinB)SubName: Full=DNA pol... 420 e-115 tr|C8NTM3|C8NTM3_9CORY Tax_Id=585529 (ppnK)SubName: Full=ATP-NAD... 419 e-115 tr|C3PHE2|C3PHE2_CORA7 Tax_Id=548476 (dinX)SubName: Full=DNA pol... 418 e-115 tr|C0VV50|C0VV50_9CORY Tax_Id=548477 (dinB)SubName: Full=DNA pol... 418 e-115 sp|Q6NGD8|DPO4_CORDI Tax_Id=1717 (dinB)RecName: Full=DNA polymer... 417 e-114 tr|C2CNJ7|C2CNJ7_CORST Tax_Id=525268 (dinB)SubName: Full=DNA pol... 417 e-114 tr|C0WKB5|C0WKB5_9CORY Tax_Id=525260 (dinB)SubName: Full=DNA pol... 416 e-114 tr|A4FMY2|A4FMY2_SACEN Tax_Id=405948 (dinX)SubName: Full=DNA pol... 404 e-110 tr|C5VD64|C5VD64_9CORY Tax_Id=553207 SubName: Full=DNA polymeras... 397 e-108 tr|C0E4P5|C0E4P5_9CORY Tax_Id=566549 SubName: Full=Putative unch... 395 e-108 tr|Q4JW84|Q4JW84_CORJK Tax_Id=306537 (dinX)SubName: Full=DNA pol... 362 4e-98 tr|C8RRC4|C8RRC4_CORJE Tax_Id=525262 (dinX)SubName: Full=DNA pol... 362 6e-98 tr|B1VHB3|B1VHB3_CORU7 Tax_Id=504474 SubName: Full=DNA polymeras... 339 5e-91 sp|Q9AK82|DPO4_STRCO Tax_Id=1902 (dinB)RecName: Full=DNA polymer... 290 2e-76 tr|C7NHN5|C7NHN5_KYTSD Tax_Id=478801 SubName: Full=Nucleotidyltr... 288 1e-75 >tr|B2HQ65|B2HQ65_MYCMM Tax_Id=216594 (dinP_1)SubName: Full=DNA polymerase IV, DinP_1;[Mycobacterium marinum] Length = 470 Score = 852 bits (2201), Expect = 0.0 Identities = 438/470 (93%), Positives = 439/470 (93%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLMGRPVLVGGMGGRGVVAGASYEARVFGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA Sbjct: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP Sbjct: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL Sbjct: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSATLPYATTDVG DPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE Sbjct: 301 TRSATLPYATTDVGALLALARRLLLDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG 470 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG Sbjct: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG 470 >tr|A0PNX8|A0PNX8_MYCUA Tax_Id=362242 (dinP_1)SubName: Full=DNA polymerase IV, DinP_1;[Mycobacterium ulcerans] Length = 473 Score = 845 bits (2182), Expect = 0.0 Identities = 434/470 (92%), Positives = 437/470 (92%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 VESRWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPM Sbjct: 4 VESRWVLHLDMDAFFASVEQLTRPTLMGRPVLVGGMGGRGVVAGASYEARVFGARSAMPM 63 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA Sbjct: 64 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 123 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVAR+EEQLLLGGLP Sbjct: 124 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARKEEQLLLGGLP 183 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE Sbjct: 184 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 243 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL Sbjct: 244 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 303 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSATLPYATTDVG DP QIGPIRLLGVGFSGLSE+RQESLFPDLDLAAE Sbjct: 304 TRSATLPYATTDVGALLALARRLLLDPAQIGPIRLLGVGFSGLSELRQESLFPDLDLAAE 363 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 TSEEAH+DFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETR SGP Sbjct: 364 TSEEAHKDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRDSGP 423 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG 470 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG Sbjct: 424 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDDG 473 >sp|P63985|DPO41_MYCTU Tax_Id=1773 (dinB1)RecName: Full=DNA polymerase IV 1; Short=Pol IV 1; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 468 Score = 694 bits (1791), Expect = 0.0 Identities = 353/469 (75%), Positives = 386/469 (82%), Gaps = 2/469 (0%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA Sbjct: 61 HQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAE 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLP Sbjct: 121 DVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV E Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTL Sbjct: 241 RAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSAT+PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL E Sbjct: 301 TRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T+ AH P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TA-AAHYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 G ARTFP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 GSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 467 >sp|P63986|DPO41_MYCBO Tax_Id=1765 (dinB1)RecName: Full=DNA polymerase IV 1; Short=Pol IV 1; EC=2.7.7.7;[Mycobacterium bovis] Length = 468 Score = 694 bits (1791), Expect = 0.0 Identities = 353/469 (75%), Positives = 386/469 (82%), Gaps = 2/469 (0%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA Sbjct: 61 HQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAE 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLP Sbjct: 121 DVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV E Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTL Sbjct: 241 RAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSAT+PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL E Sbjct: 301 TRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T+ AH P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TA-AAHYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 G ARTFP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 GSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 467 >tr|A4KH83|A4KH83_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis str. Haarlem] Length = 468 Score = 694 bits (1791), Expect = 0.0 Identities = 353/469 (75%), Positives = 386/469 (82%), Gaps = 2/469 (0%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA Sbjct: 61 HQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAE 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLP Sbjct: 121 DVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV E Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTL Sbjct: 241 RAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSAT+PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL E Sbjct: 301 TRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T+ AH P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TA-AAHYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 G ARTFP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 GSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 467 >tr|A2VI54|A2VI54_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis C] Length = 468 Score = 694 bits (1791), Expect = 0.0 Identities = 353/469 (75%), Positives = 386/469 (82%), Gaps = 2/469 (0%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA Sbjct: 61 HQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAE 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLP Sbjct: 121 DVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV E Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTL Sbjct: 241 RAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSAT+PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL E Sbjct: 301 TRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T+ AH P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TA-AAHYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 G ARTFP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 GSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 467 >tr|C6DSQ5|C6DSQ5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase IV dinX;[Mycobacterium tuberculosis] Length = 468 Score = 692 bits (1785), Expect = 0.0 Identities = 352/469 (75%), Positives = 385/469 (82%), Gaps = 2/469 (0%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQARRLIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA Sbjct: 61 HQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAE 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLP Sbjct: 121 DVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV E Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTL Sbjct: 241 RAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSAT+PY T D G DP+QIGPIRLLGVGFSGLS++RQESLF D DL E Sbjct: 301 TRSATMPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T+ AH P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGP Sbjct: 361 TA-AAHYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 G ARTFP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 GSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 467 >tr|C1ANH3|C1ANH3_MYCBT Tax_Id=561275 (dinX)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Mycobacterium bovis] Length = 463 Score = 683 bits (1762), Expect = 0.0 Identities = 348/464 (75%), Positives = 381/464 (82%), Gaps = 2/464 (0%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 LIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA +VE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLPVRRLW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSEEA 365 +PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL ET+ A Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQETA-AA 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 H P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGPG ART Sbjct: 360 HYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSART 418 Query: 426 FPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 FP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 FPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 462 >tr|A5U2P4|A5U2P4_MYCTA Tax_Id=419947 (dinX)SubName: Full=DNA polymerase IV DinX;[Mycobacterium tuberculosis] Length = 463 Score = 683 bits (1762), Expect = 0.0 Identities = 348/464 (75%), Positives = 381/464 (82%), Gaps = 2/464 (0%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 LIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA +VE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLPVRRLW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSEEA 365 +PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL ET+ A Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQETA-AA 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 H P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGPG ART Sbjct: 360 HYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSART 418 Query: 426 FPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 FP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 FPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 462 >tr|A1KIW7|A1KIW7_MYCBP Tax_Id=410289 (dinX)SubName: Full=Probable DNA polymerase IV dinX;[Mycobacterium bovis] Length = 463 Score = 683 bits (1762), Expect = 0.0 Identities = 348/464 (75%), Positives = 381/464 (82%), Gaps = 2/464 (0%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 LIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA +VE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLPVRRLW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSEEA 365 +PY TTD G DP+QIGPIRLLGVGFSGLS++RQESLF D DL ET+ A Sbjct: 301 MPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQETA-AA 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 H P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGPG ART Sbjct: 360 HYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSART 418 Query: 426 FPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 FP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 FPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 462 >tr|A5WMM4|A5WMM4_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase IV dinX (Pol IV 1);[Mycobacterium tuberculosis] Length = 463 Score = 681 bits (1756), Expect = 0.0 Identities = 347/464 (74%), Positives = 380/464 (81%), Gaps = 2/464 (0%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 LIGVTAVVLPPRG VYG+ASRRVFDTVRGLVPVVEQLSFDEAF EPPQL GA +VE F Sbjct: 61 LIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CE LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVV EEQ LL GLPVRRLW Sbjct: 121 CERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKLHRLGIET+GQLAAL+DAE ANILGAT+GPALHRLARGIDDRPV ERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QISAESTFA+DLTT++QL +A+D IAEHAHQRLLRDGRG+RT+TVKLKK+DMSTLTRSAT Sbjct: 241 QISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSAT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSEEA 365 +PY T D G DP+QIGPIRLLGVGFSGLS++RQESLF D DL ET+ A Sbjct: 301 MPYPTPDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQETA-AA 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 H P + + +WR+GDDV H ELGHGWVQGAGHGVVTVRFETRGSGPG ART Sbjct: 360 HYVETPG-AVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSART 418 Query: 426 FPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDLDD 469 FP++T DI+ A+P+DSLDWPD++GQL VE +A S P VDD+ D Sbjct: 419 FPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGD 462 >tr|Q740U4|Q740U4_MYCPA Tax_Id=1770 (dinX)SubName: Full=DinX;[Mycobacterium paratuberculosis] Length = 463 Score = 664 bits (1713), Expect = 0.0 Identities = 339/467 (72%), Positives = 379/467 (81%), Gaps = 7/467 (1%) Query: 1 VESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPM 60 +ESRWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPM Sbjct: 1 MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPM 60 Query: 61 HQARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATA 120 HQA+RL+GV+AVVLPPRG VYGVASRRVFDT+R +VPVVEQLSFDE FGEP QL GA Sbjct: 61 HQAKRLVGVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAQ 120 Query: 121 EVEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLP 180 +VE FCE LRRRVR++TGLIASVGAGSGKQIAKIASGLAKPDG+RVV R EE+ LLGGLP Sbjct: 121 DVEAFCEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDGVRVVRRAEERELLGGLP 180 Query: 181 VRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAE 240 VRRLWGIGPVAEEKLHRLGIET+G+LAAL DAE ANILGAT+GPALHRLARGIDDRPVAE Sbjct: 181 VRRLWGIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVAE 240 Query: 241 RAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTL 300 RAEAKQIS+ESTFA DLTTL+QLR+A++PIAEHAH RLLRDGRG+RTVTVKLKK+DMSTL Sbjct: 241 RAEAKQISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMSTL 300 Query: 301 TRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAE 360 TRSATLPYATT+ DP +IGPIRLLGVGFSGLSEVRQESLFPDL++ A Sbjct: 301 TRSATLPYATTEAAALVGVARRLLLDPREIGPIRLLGVGFSGLSEVRQESLFPDLEMPAP 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 S+ Q + A+ A WR+GDDV H +LGHGWVQGAGHGVVT RFETR SGP Sbjct: 361 QSDS--QSVETAAEAMFGPGHDAGWRVGDDVAHPDLGHGWVQGAGHGVVTARFETRTSGP 418 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDDL 467 GPARTFP +++++ ANPVDSLDWPD+ VE ++S P +D+ Sbjct: 419 GPARTFPADSAELVRANPVDSLDWPDY-----VEGLQESSAPPAEDV 460 >tr|A0QHM7|A0QHM7_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Mycobacterium avium] Length = 458 Score = 651 bits (1679), Expect = 0.0 Identities = 332/451 (73%), Positives = 370/451 (82%), Gaps = 2/451 (0%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQLTRPT SYEARVFGARSAMPMHQA+R Sbjct: 1 MLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQAKR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 L+GV+AVVLPPRG VYGVASRRVFDT+R +VPVVEQLSFDE FGEP QL GA +VE F Sbjct: 61 LVGVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAEDVEAF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CE LRRRVR++TGLIASVGAGSGKQIAKIASGLAKPDG+RVV R EE+ LLGGLPVRRLW Sbjct: 121 CEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDGVRVVRRAEERELLGGLPVRRLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKLHRLGIET+G+LAAL DAE ANILGAT+GPALHRLARGIDDRPVAERAEAK Sbjct: 181 GIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVAERAEAK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QIS+ESTFA DLTTL+QLR+A++PIAEHAH RLLRDGRG+RTVTVKLKK+DMSTLTRSAT Sbjct: 241 QISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMSTLTRSAT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSEEA 365 LPYATT+ DP +IGPIRLLGVGFSGLSEVRQESLFPDL++ A S+ Sbjct: 301 LPYATTEAAALVGVARRLLLDPREIGPIRLLGVGFSGLSEVRQESLFPDLEMPAPQSDS- 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 Q + A+ A WR+GDDV H +LGHGWVQGAGHGVVT RFETR SGPGPART Sbjct: 360 -QSVETAAEAMFGPGHDAGWRVGDDVAHPDLGHGWVQGAGHGVVTARFETRTSGPGPART 418 Query: 426 FPIETSDITAANPVDSLDWPDFVGQLRVENA 456 FP +++++ ANPVDSLDWPD+V L+ +A Sbjct: 419 FPADSAELVRANPVDSLDWPDYVEGLQESSA 449 >tr|Q1B7D2|Q1B7D2_MYCSS Tax_Id=164756 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 622 bits (1604), Expect = e-176 Identities = 323/451 (71%), Positives = 364/451 (80%), Gaps = 9/451 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARV GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRG VYG+ASRRVFDTVR LVPV+EQLSFDEAFGEP +L GA+ A+VE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 +FCE LR RV +ETGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R +E+ LL L VR+ Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAE+KLHRLGIET+GQLAAL++AEVA+ILGATVGPALHRLARGID+RPVAERAE Sbjct: 182 LWGIGPVAEDKLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDERPVAERAE 241 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAESTF DL TLDQ+R+A+ PIA+HAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 ATLP ATTD DPV+IGPIRL+GVGFSGLSEVRQESLFPDL+L + E Sbjct: 302 ATLPSATTDAATLSATARRLLVDPVEIGPIRLVGVGFSGLSEVRQESLFPDLELVED--E 359 Query: 364 EAHQDFHPSHGALSSTPAGAV---WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 A + P +S + A AV WR+GDDV H ELGHGW+QGAGHGV+T+RFETR +GP Sbjct: 360 PATRPAVP----MSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGP 415 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQL 451 GPA+TFP D+ ANPVDSLDW D+V L Sbjct: 416 GPAKTFPDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A1UHP1|A1UHP1_MYCSK Tax_Id=189918 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 622 bits (1604), Expect = e-176 Identities = 323/451 (71%), Positives = 364/451 (80%), Gaps = 9/451 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARV GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRG VYG+ASRRVFDTVR LVPV+EQLSFDEAFGEP +L GA+ A+VE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 +FCE LR RV +ETGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R +E+ LL L VR+ Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAE+KLHRLGIET+GQLAAL++AEVA+ILGATVGPALHRLARGID+RPVAERAE Sbjct: 182 LWGIGPVAEDKLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDERPVAERAE 241 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAESTF DL TLDQ+R+A+ PIA+HAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 ATLP ATTD DPV+IGPIRL+GVGFSGLSEVRQESLFPDL+L + E Sbjct: 302 ATLPSATTDAATLSATARRLLVDPVEIGPIRLVGVGFSGLSEVRQESLFPDLELVED--E 359 Query: 364 EAHQDFHPSHGALSSTPAGAV---WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 A + P +S + A AV WR+GDDV H ELGHGW+QGAGHGV+T+RFETR +GP Sbjct: 360 PATRPAVP----MSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGP 415 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQL 451 GPA+TFP D+ ANPVDSLDW D+V L Sbjct: 416 GPAKTFPDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A3Q167|A3Q167_MYCSJ Tax_Id=164757 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium sp.] Length = 452 Score = 620 bits (1599), Expect = e-175 Identities = 322/451 (71%), Positives = 363/451 (80%), Gaps = 9/451 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARV GARSAMPMHQA Sbjct: 2 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVHGARSAMPMHQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRG VYG+ASRRVFDTVR LVPV+EQLSFDEAFGEP +L GA+ A+VE Sbjct: 62 RRLVGAPAVVLPPRGVVYGLASRRVFDTVRTLVPVLEQLSFDEAFGEPQELAGASAADVE 121 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 +FCE LR RV +ETGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R +E+ LL L VR+ Sbjct: 122 EFCELLRARVLEETGLVASVGAGSGKQIAKIASGLAKPDGIRVVRRADERRLLDSLAVRK 181 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAE++LHRLGIET+GQLAAL++AEVA+ILGATVGPALHRLARGIDDRPVAERAE Sbjct: 182 LWGIGPVAEDRLHRLGIETIGQLAALSEAEVADILGATVGPALHRLARGIDDRPVAERAE 241 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAESTF DL TLDQ+R+A+ PIA+HAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 242 AKQISAESTFPADLITLDQVREAIGPIADHAHRRLAKDGRGARTVTVKLKKSDMSTLTRS 301 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 ATLP ATTD DP +IGPIRL+GVGFSGLSEVRQESLFPDL+L + E Sbjct: 302 ATLPSATTDAATLSATARRLLVDPAEIGPIRLVGVGFSGLSEVRQESLFPDLELVED--E 359 Query: 364 EAHQDFHPSHGALSSTPAGAV---WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 A + P +S + A AV WR+GDDV H ELGHGW+QGAGHGV+T+RFETR +GP Sbjct: 360 LATRPAVP----MSVSEAAAVPPAWRVGDDVAHPELGHGWIQGAGHGVMTIRFETRSTGP 415 Query: 421 GPARTFPIETSDITAANPVDSLDWPDFVGQL 451 GPA+TFP D+ ANPVDSLDW D+V L Sbjct: 416 GPAKTFPDTVPDVVRANPVDSLDWADYVDAL 446 >tr|A0QX48|A0QX48_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 463 Score = 613 bits (1581), Expect = e-173 Identities = 313/448 (69%), Positives = 356/448 (79%), Gaps = 3/448 (0%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 12 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARRYGARSAMPMHQA 71 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRGAVYGVASRR DTVR +VPV+EQLSFDEAFGEP +L GA A+VE Sbjct: 72 RRLVGAPAVVLPPRGAVYGVASRRALDTVRSVVPVLEQLSFDEAFGEPSELAGAEAADVE 131 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 FCE LR +V + TGL+ASVGAGSGKQIAKIASGLAKPDGIRVV R+EE +LL GLPVR+ Sbjct: 132 AFCERLRAKVLEHTGLVASVGAGSGKQIAKIASGLAKPDGIRVVRREEEAVLLHGLPVRK 191 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAE++LHR+GIET+G AAL +AE AN+LG+T+GPALHRLARGIDDRPVAERAE Sbjct: 192 LWGIGPVAEDRLHRIGIETIGAFAALTEAEAANVLGSTIGPALHRLARGIDDRPVAERAE 251 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAESTF DLTTL QL+DA+ PI EHAH+RL +DGRG+RTVTVKLKK+DMSTLTRS Sbjct: 252 AKQISAESTFPEDLTTLAQLQDAIVPIGEHAHRRLEKDGRGARTVTVKLKKSDMSTLTRS 311 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 ATL YATT+ DPV+IGPIRL+GVGFSGLS++RQESLFPDL+ E + Sbjct: 312 ATLAYATTEASTLIGTARRLLLDPVEIGPIRLVGVGFSGLSDIRQESLFPDLEQPEEFPD 371 Query: 364 EAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPA 423 A Q G S T WR+GDDV H ELGHGWVQGAGHGV+TVRFETR SGPGPA Sbjct: 372 AAPQVESVQTGPSSPT---TQWRVGDDVAHTELGHGWVQGAGHGVMTVRFETRASGPGPA 428 Query: 424 RTFPIETSDITAANPVDSLDWPDFVGQL 451 RTFP ++ +I+ A+PVDSLDW +++ L Sbjct: 429 RTFPEDSPEISRADPVDSLDWAEYLSSL 456 >tr|A1T8S8|A1T8S8_MYCVP Tax_Id=350058 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 453 Score = 612 bits (1577), Expect = e-173 Identities = 313/450 (69%), Positives = 358/450 (79%), Gaps = 7/450 (1%) Query: 3 SRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQ 62 +RWVLHLDMDAFFASVEQLTRPT SYE+RVFGARSAMPM Q Sbjct: 3 TRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGVGGRGVVAGASYESRVFGARSAMPMLQ 62 Query: 63 ARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEV 122 A+RL+G AVVLPPRG VYG ASRRVF+TVR LVPV+EQLSFDEAFGEP L GAA EV Sbjct: 63 AKRLVGAAAVVLPPRGVVYGTASRRVFETVRTLVPVLEQLSFDEAFGEPTDLAGAAEPEV 122 Query: 123 EQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVR 182 E FC +LR RV TGL+ASVGAGSGKQ+AKIASGLAKPDGIRV+ R EE LL GLPVR Sbjct: 123 EAFCAELRSRVLAVTGLVASVGAGSGKQVAKIASGLAKPDGIRVIDRDEEATLLAGLPVR 182 Query: 183 RLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERA 242 RLWGIGPVAE++LHRLGIET+G LAAL++AEVANILGATVGPALHRLARG+DDRPVAE A Sbjct: 183 RLWGIGPVAEDRLHRLGIETIGALAALSEAEVANILGATVGPALHRLARGVDDRPVAENA 242 Query: 243 EAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTR 302 AKQISAESTFA DLTT+ QLR+A+ PI +HAH+RL +DGRG+RTVTVKLK++DMSTLTR Sbjct: 243 PAKQISAESTFAQDLTTIAQLREAIGPIGDHAHKRLTKDGRGARTVTVKLKRSDMSTLTR 302 Query: 303 SATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETS 362 SATLPYATT+ DPV+IGP+RL+GVGFSGLS+V+QE LFPDL+ +TS Sbjct: 303 SATLPYATTEATTLIGTARRLLLDPVEIGPVRLVGVGFSGLSQVQQEPLFPDLETVEQTS 362 Query: 363 EEAHQDFHPSHGALSSTPAGA-VWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPG 421 ++A + L+ A A WR+GDDV H + GHGWVQGAGHGV+TVRFETRG+GPG Sbjct: 363 DDA------APVTLADVAATAPAWRVGDDVAHTDHGHGWVQGAGHGVMTVRFETRGTGPG 416 Query: 422 PARTFPIETSDITAANPVDSLDWPDFVGQL 451 PARTF + +T ANPVDSLDWPDFV ++ Sbjct: 417 PARTFRADDPALTRANPVDSLDWPDFVEEM 446 >tr|A4T9J7|A4T9J7_MYCGI Tax_Id=350054 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Mycobacterium gilvum] Length = 455 Score = 607 bits (1564), Expect = e-171 Identities = 316/455 (69%), Positives = 354/455 (77%), Gaps = 13/455 (2%) Query: 3 SRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQ 62 +RWVLHLDMDAFFASVEQLTRPT SYE+RVFGARSAMPMHQ Sbjct: 3 ARWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYESRVFGARSAMPMHQ 62 Query: 63 ARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEV 122 ARRL+G AVVLPPRG VYG+ASRRVF+TVR VPV+EQLSFDEAFGEP L GA+ EV Sbjct: 63 ARRLVGAGAVVLPPRGVVYGLASRRVFETVRARVPVLEQLSFDEAFGEPVALAGASAGEV 122 Query: 123 EQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVR 182 FC+ LR V TGL+ASVGAGSGKQIAKIASGLAKPDG+ V+A +E+ LL LPVR Sbjct: 123 ADFCQALRAEVTAVTGLVASVGAGSGKQIAKIASGLAKPDGVTVIAHADERALLDDLPVR 182 Query: 183 RLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERA 242 RLWGIGPVAEEKLHRLGI+T+G AALAD EVANILG TVGPALHRLARGIDDRPV E A Sbjct: 183 RLWGIGPVAEEKLHRLGIDTIGGFAALADTEVANILGPTVGPALHRLARGIDDRPVTENA 242 Query: 243 EAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTR 302 AKQISAESTF DLTTL QLRDA PI EHAH+RLL+DGRG+RTVTVKLKK+DMSTLTR Sbjct: 243 PAKQISAESTFPEDLTTLRQLRDAAAPIGEHAHRRLLKDGRGARTVTVKLKKSDMSTLTR 302 Query: 303 SATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETS 362 SATLPYATTD G DPV IGPIRL+G+GFSGLS+++QESLFP+L+ A T+ Sbjct: 303 SATLPYATTDAGTLIATAHRLLLDPVDIGPIRLVGIGFSGLSDIQQESLFPELESA--TT 360 Query: 363 EEAHQDFHPSHGALSSTPAGA------VWRIGDDVTHRELGHGWVQGAGHGVVTVRFETR 416 EE S G LSS + A WR+GDDV+H E GHGWVQGAGHGV+TVRFETR Sbjct: 361 EEL-----TSLGPLSSPLSSAASHVEPAWRVGDDVSHTEFGHGWVQGAGHGVMTVRFETR 415 Query: 417 GSGPGPARTFPIETSDITAANPVDSLDWPDFVGQL 451 G+GPGPARTF + ++ ANPVDSLDWPD+V ++ Sbjct: 416 GTGPGPARTFREDDPALSRANPVDSLDWPDYVAEM 450 >tr|B1MC11|B1MC11_MYCA9 Tax_Id=561007 SubName: Full=DNA polymerase IV family;[Mycobacterium abscessus] Length = 459 Score = 575 bits (1483), Expect = e-162 Identities = 293/442 (66%), Positives = 342/442 (77%), Gaps = 5/442 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPMHQA Sbjct: 6 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGTGGRGVVAGASYEARVFGARSAMPMHQA 65 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G+ AVVLPPRG+VYGVASRRVF+TVR ++P++EQLSFDEAFGEP +L GA T+ V Sbjct: 66 RRLVGINAVVLPPRGSVYGVASRRVFETVRSMIPILEQLSFDEAFGEPSELFGATTSAVA 125 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + +LR RV ETGL ASVGAGSGKQIAKIASGLAKPDG+R++A +EE+ LL LPVR+ Sbjct: 126 DYIHELRSRVLGETGLTASVGAGSGKQIAKIASGLAKPDGVRIIAPEEERTLLDELPVRK 185 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAEE+L+RLGI T+GQ AAL +E A++LG T+GPALH+LARG+DDRPVAERAE Sbjct: 186 LWGIGPVAEERLNRLGINTIGQFAALQTSEAASVLGGTIGPALHQLARGVDDRPVAERAE 245 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 KQISAESTF DLTTLDQLR A++PI HAH+RL++ GRG RTVTVKL+++DMS LTRS Sbjct: 246 TKQISAESTFPDDLTTLDQLRQAIEPIGVHAHRRLIKHGRGVRTVTVKLRRSDMSILTRS 305 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 ATLPYATT+ DPV+IGPIRL+GVGFSG S+V+Q SLFPDLD A +E Sbjct: 306 ATLPYATTERAVLMSAARRLLLDPVEIGPIRLVGVGFSGFSDVQQTSLFPDLDQAEPVAE 365 Query: 364 EAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPA 423 D PS + + AG W +GDDV H E GHGW+QG GHGV+TVRFETR SGPG A Sbjct: 366 ---SDEVPSTAEPTHSTAG--WGVGDDVDHAEFGHGWIQGTGHGVMTVRFETRSSGPGIA 420 Query: 424 RTFPIETSDITAANPVDSLDWP 445 RTF ++ I A+PV SLDWP Sbjct: 421 RTFAVDDPGIARADPVASLDWP 442 >tr|Q5YYW6|Q5YYW6_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase IV family protein;[Nocardia farcinica] Length = 463 Score = 524 bits (1350), Expect = e-147 Identities = 268/440 (60%), Positives = 326/440 (74%), Gaps = 1/440 (0%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEARV+GARSAMPMHQA Sbjct: 23 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTGARGVVAGASYEARVYGARSAMPMHQA 82 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 +RL+GV+AVV+PPRGAVY S RVF+ +R +PV+E LSFDEAFGEP +L GA+ A V Sbjct: 83 KRLVGVSAVVVPPRGAVYAEMSGRVFEALRSRIPVLETLSFDEAFGEPAELAGASVARVH 142 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 +FC +LR VR+ TGL+ASVGAG+GKQ+AKIASGLAKPDGIRVV+ E+Q LL LPVR Sbjct: 143 EFCAELRALVRERTGLVASVGAGTGKQLAKIASGLAKPDGIRVVSPAEQQRLLAALPVRT 202 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAE +L LGIETVG AAL ++E ++LG ++G ALHRLARGIDDRPV ERAE Sbjct: 203 LWGIGPVAEGRLRTLGIETVGAFAALPESEAVSLLGGSIGAALHRLARGIDDRPVTERAE 262 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAE+T+ D+ T+ LR A+D +A AH+RL DGR +RTV +KLK++DMS +TRS Sbjct: 263 AKQISAENTYETDIVTMAALRQAIDAMAAAAHRRLGNDGRAARTVVLKLKRSDMSIVTRS 322 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 +TLPYATTD+ DPV++GPIRL+GVG++GLS VRQESLFP+LD A + Sbjct: 323 STLPYATTDLAALTAAAQRSAIDPVELGPIRLVGVGYAGLSAVRQESLFPELDRAPVDED 382 Query: 364 EAHQDFHPSHGALSSTPAGA-VWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGP 422 A + P+ A + PA +W G DV H E GHGWVQGAGHGVVTVRFET +GPGP Sbjct: 383 AAVEPAEPAAPAPVADPAAVRIWYPGMDVAHPEYGHGWVQGAGHGVVTVRFETSSTGPGP 442 Query: 423 ARTFPIETSDITAANPVDSL 442 ARTF + ++ A+P+ SL Sbjct: 443 ARTFSADDISLSRADPLGSL 462 >tr|C2ATR0|C2ATR0_TSUPA Tax_Id=521096 SubName: Full=Nucleotidyltransferase/DNA polymerase involved in DNA repair;[Tsukamurella paurometabola DSM 20162] Length = 477 Score = 509 bits (1310), Expect = e-142 Identities = 265/443 (59%), Positives = 315/443 (71%) Query: 3 SRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQ 62 +RWVLH DMDAFFAS EQLTRPT SYEARV+GARSAMPMHQ Sbjct: 25 ARWVLHFDMDAFFASCEQLTRPTLRGRPVLVGGLGGRGVVAGCSYEARVYGARSAMPMHQ 84 Query: 63 ARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEV 122 ARRL+G AVVLPPRGA+YG SRRVF TVR L+PVVE LSFDEAFGEP +L GA++AEV Sbjct: 85 ARRLVGAPAVVLPPRGALYGTVSRRVFATVRELIPVVETLSFDEAFGEPAELAGASSAEV 144 Query: 123 EQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVR 182 F E+LR R+R TGLIASVGAG+GKQ AKIASGLAKPDG+ V+ ++ +L LPVR Sbjct: 145 VAFAEELRARIRAATGLIASVGAGAGKQAAKIASGLAKPDGVSVIPPAAQETVLYPLPVR 204 Query: 183 RLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERA 242 +LWGIGPVA E+L RLGIET+GQ AA+++ EV ++LG T+GPALHRLARG DDRP+ R Sbjct: 205 KLWGIGPVAGERLSRLGIETIGQFAAMSEVEVVSVLGVTLGPALHRLARGQDDRPIETRT 264 Query: 243 EAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTR 302 AK ISAE T +D+TT++ LR +D AEHA +RL +DGRG+RTV +KLK++DMS LTR Sbjct: 265 GAKSISAEHTLEVDVTTMNALRREIDRSAEHAVRRLRKDGRGARTVVLKLKRSDMSILTR 324 Query: 303 SATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETS 362 SATLP ATTD DPV+IG +RL+GVGFSGLS V Q +LF D AAE + Sbjct: 325 SATLPSATTDAAVLTATAQRLALDPVEIGGLRLVGVGFSGLSSVEQFTLFGDEAPAAEAA 384 Query: 363 EEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGP 422 + WR G DV H E GHGWVQGAGHGV++VRFETR SGPG Sbjct: 385 PVVADGADVVETTDDAAEPVVGWRTGMDVRHPEFGHGWVQGAGHGVLSVRFETRESGPGR 444 Query: 423 ARTFPIETSDITAANPVDSLDWP 445 R+F + D+ A+P+DSLDWP Sbjct: 445 MRSFRADDPDLREADPLDSLDWP 467 >tr|Q0SHT2|Q0SHT2_RHOSR Tax_Id=101510 SubName: Full=DNA polymerase IV;[Rhodococcus sp.] Length = 449 Score = 507 bits (1306), Expect = e-141 Identities = 266/446 (59%), Positives = 324/446 (72%), Gaps = 6/446 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQA 63 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRG +YG+ S+ VFD +RG +PV+EQLS DEAFGEP +L GA V+ Sbjct: 64 RRLVGPGAVVLPPRGRLYGMLSKSVFDALRGPMPVLEQLSMDEAFGEPIELAGADAGTVQ 123 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++CE LR V +ETGL+AS+GAGSGKQ+AKIASGLAKP+GI V+ E+ +L LPVR+ Sbjct: 124 RYCEGLRALVLEETGLVASIGAGSGKQVAKIASGLAKPNGITVIPPDEQHAVLDELPVRK 183 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAEEKL RLGIET+G A ++EVA+ILG TVGP LHRLA+GID+RPVAERAE Sbjct: 184 LWGIGPVAEEKLKRLGIETIGGFARTPESEVASILGTTVGPGLHRLAQGIDNRPVAERAE 243 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQ+SAE+TFA D+ T+ +LR A++ A A RL +DGR +RTV +KLKKADMS +TRS Sbjct: 244 SKQVSAETTFATDIVTMAELRGAVESSAASAFVRLQKDGRAARTVVLKLKKADMSVVTRS 303 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TLPYAT D DP+++GP+RL+GVGF+GLS VRQ SLFP+LDL + Sbjct: 304 VTLPYATLDRQILVAAAQRQVIDPLELGPVRLVGVGFAGLSTVRQGSLFPELDLDVPGYQ 363 Query: 364 EAHQDFHPSHGALSS---TPAGAV---WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRG 417 E+ + LS+ PA A+ W G DVTH + GHGWVQGAGHGVVTVRFETR Sbjct: 364 ESKITVAGADDGLSAPVPAPARAIDTRWHPGLDVTHPDFGHGWVQGAGHGVVTVRFETRT 423 Query: 418 SGPGPARTFPIETSDITAANPVDSLD 443 +GPG ARTF ++ + + A+ SL+ Sbjct: 424 TGPGKARTFKVDDAQLERADVEGSLE 449 >tr|C1AU44|C1AU44_RHOOB Tax_Id=632772 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Rhodococcus opacus] Length = 449 Score = 506 bits (1302), Expect = e-141 Identities = 265/445 (59%), Positives = 321/445 (72%), Gaps = 6/445 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFASVEQLTRPT SYEARVFGARSAMPMHQA Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQA 63 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RRL+G AVVLPPRG +YG+ S+ VFD +RG +PV+EQLS DEAFGEP +L GA A V+ Sbjct: 64 RRLVGPGAVVLPPRGRLYGMLSKSVFDALRGPMPVLEQLSMDEAFGEPTELAGADAAAVQ 123 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++CE LR V +ETGL+AS+GAGSGKQ+AKIASGLAKPDGI V++ E+ +L LPVR+ Sbjct: 124 RYCEGLRALVLEETGLVASIGAGSGKQVAKIASGLAKPDGITVISPDEQHAVLDELPVRK 183 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAEEKL RLGIET+G A ++EVA+ILG T+GP LHRLA+G+D+RPVAERAE Sbjct: 184 LWGIGPVAEEKLKRLGIETIGGFARTPESEVASILGTTIGPGLHRLAQGVDNRPVAERAE 243 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQ+SAE+TFA D+ T+ +LR A++ A A RL +DGR +RTV +KLKKADMS +TRS Sbjct: 244 SKQVSAETTFATDIVTMAELRGAVEASAASAFVRLQKDGRAARTVVLKLKKADMSIVTRS 303 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TLPYAT D DP+++GP+RL+GVGF+GLS VRQ SLFP+LDL + Sbjct: 304 VTLPYATLDRQILVAAAQRQVIDPIELGPVRLVGVGFAGLSTVRQGSLFPELDLDVPGYQ 363 Query: 364 EAHQDFHPSHGALS---STPAGAV---WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRG 417 E+ L+ PA A+ W G DVTH + GHGWVQGAGHGVVTVRFETR Sbjct: 364 ESKITEAGGDDGLAVPVPAPARAIDTRWHPGLDVTHPDFGHGWVQGAGHGVVTVRFETRT 423 Query: 418 SGPGPARTFPIETSDITAANPVDSL 442 +GPG ARTF + + A+ SL Sbjct: 424 TGPGKARTFKEDDGQLDTADVEGSL 448 >tr|D0LAR7|D0LAR7_GORB4 Tax_Id=526226 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Gordonia bronchialis] Length = 449 Score = 492 bits (1267), Expect = e-137 Identities = 260/441 (58%), Positives = 312/441 (70%), Gaps = 2/441 (0%) Query: 7 LHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARRL 66 +HLDMDAFFASVEQLTRPT SYEAR FGA SAMPMHQARRL Sbjct: 1 MHLDMDAFFASVEQLTRPTLRGRPVLVGGTGGRGVVAGASYEARAFGAGSAMPMHQARRL 60 Query: 67 IGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQFC 126 +G TAVV+PPRG+VY V S R+F VR VPV+E LSFDEAF EP +L GA + F Sbjct: 61 VGPTAVVVPPRGSVYRVVSSRIFALVRRAVPVIEMLSFDEAFAEPAELAGAPASAAADFA 120 Query: 127 EDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLWG 186 E +R +RDE GL ASVG GSGKQIAKIASG AKPDG+ V+ E L LPVR+LWG Sbjct: 121 ERIRGIIRDEVGLAASVGFGSGKQIAKIASGQAKPDGVMVIPPSAELAFLHELPVRKLWG 180 Query: 187 IGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAKQ 246 IGPV+ +KL RLGI+T+G LAA+A EV+++LGATVGPALHRLA+GID+RPV ERA AKQ Sbjct: 181 IGPVSGDKLSRLGIDTIGDLAAMAPVEVSSVLGATVGPALHRLAQGIDERPVTERASAKQ 240 Query: 247 ISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSATL 306 ISAESTFA D+ L +LR A+D A AH+RLL DGRG+RTV VKLK++DMS LTRSATL Sbjct: 241 ISAESTFAADIVDLPELRQAIDKAAADAHRRLLADGRGARTVVVKLKRSDMSVLTRSATL 300 Query: 307 PYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDL--DLAAETSEE 364 P ATTD+ DP IGPIRL+GVG+SGLS V+Q +LF D D A+++ Sbjct: 301 PTATTDLDELDRAAQRLALDPRSIGPIRLVGVGYSGLSSVQQYALFGDPVDDAIAQSAVV 360 Query: 365 AHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPAR 424 + +D A++ + + G DV H E GHGWVQG+GHGVVTVRFETR +GPG R Sbjct: 361 SSRDTSAPDDAVAEDVSSSRLVAGRDVRHPEFGHGWVQGSGHGVVTVRFETRTTGPGRTR 420 Query: 425 TFPIETSDITAANPVDSLDWP 445 TF ++ +T A+P+DSL+WP Sbjct: 421 TFAVDDPLLTLADPLDSLEWP 441 >tr|C1A0W3|C1A0W3_RHOE4 Tax_Id=234621 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 454 Score = 485 bits (1249), Expect = e-135 Identities = 263/444 (59%), Positives = 306/444 (68%), Gaps = 6/444 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLHLDMDAFFAS EQLTRPT SYEARVFGARSAMPMHQA Sbjct: 11 RWVLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQA 70 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RR++G AVVLPPR ++Y V S+R FD +R +P++EQLS DEAFGEP +L G EV Sbjct: 71 RRMVGGGAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGADEVR 130 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 FCEDLR ++ ETGL+AS+GAG+GKQ+AKIASGLAKPDG+ V+ + LL LPVR+ Sbjct: 131 AFCEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDGVAVIPPGMQHELLDPLPVRK 190 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIGPVAEEKL RLGIET+G A AEVA+ILG TVGP LHRLA+GIDDRPVAERAE Sbjct: 191 LWGIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRPVAERAE 250 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQISAESTFA D+ T+ QLR A++ A RL +DGR +RTV +KLKK+DMS LTRS Sbjct: 251 SKQISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSDMSILTRS 310 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-----LA 358 TLP+AT D DP ++GPIRL+GVGF+GLS VRQ SLFP+LD Sbjct: 311 VTLPFATIDRQILVATAQKQVIDPQELGPIRLVGVGFAGLSTVRQGSLFPELDQDVPGYP 370 Query: 359 AETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGS 418 ET A + + P W G DV H E GHGWVQGAGHGVVTVRFETR S Sbjct: 371 VETLTGALDEAELDVPVAARVPQ-RYWHPGLDVKHPEYGHGWVQGAGHGVVTVRFETRSS 429 Query: 419 GPGPARTFPIETSDITAANPVDSL 442 G G A+TF + A+ VDSL Sbjct: 430 GTGIAKTFAESDEVLEVADAVDSL 453 >tr|C3JJ35|C3JJ35_RHOER Tax_Id=596309 SubName: Full=DNA polymerase IV 1; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 442 Score = 481 bits (1237), Expect = e-133 Identities = 260/442 (58%), Positives = 305/442 (69%), Gaps = 6/442 (1%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFAS EQLTRPT SYEARVFGARSAMPMHQARR Sbjct: 1 MLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQARR 60 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 ++G +AVVLPPR ++Y V S+R FD +R +P++EQLS DEAFGEP +L G EV F Sbjct: 61 MVGASAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGADEVRAF 120 Query: 126 CEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLW 185 CEDLR ++ ETGL+AS+GAG+GKQ+AKIASGLAKPDG+ V+ + LL LPVR+LW Sbjct: 121 CEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDGVAVIPPGMQHELLDPLPVRKLW 180 Query: 186 GIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAK 245 GIGPVAEEKL RLGIET+G A AEVA+ILG TVGP LHRLA+GIDDRPVAERAE+K Sbjct: 181 GIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRPVAERAESK 240 Query: 246 QISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSAT 305 QISAESTFA D+ T+ QLR A++ A RL +DGR +RTV +KLKK+DMS LTRS T Sbjct: 241 QISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSDMSILTRSVT 300 Query: 306 LPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-----LAAE 360 LP+AT D DP ++GPIRL+GVGF+GLS VRQ SLFP+LD E Sbjct: 301 LPFATIDRQILIATAQKQVIDPQELGPIRLVGVGFAGLSTVRQGSLFPELDQDVPGYPVE 360 Query: 361 TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGP 420 T A + + P W G DV H E GHGWVQGAGHGVVTVRFETR SG Sbjct: 361 TLTGALDEAELDAPVAARVPQ-RYWHPGLDVKHPEYGHGWVQGAGHGVVTVRFETRSSGT 419 Query: 421 GPARTFPIETSDITAANPVDSL 442 G A+TF + A+ VDSL Sbjct: 420 GIAKTFAESDEVLEVADAVDSL 441 >tr|C0XS17|C0XS17_9CORY Tax_Id=525263 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium lipophiloflavum DSM 44291] Length = 455 Score = 441 bits (1134), Expect = e-121 Identities = 234/453 (51%), Positives = 297/453 (65%), Gaps = 9/453 (1%) Query: 3 SRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQ 62 +RWVLH+DMDAF+AS EQLTRPT SYEAR +GARSAMP H+ Sbjct: 2 ARWVLHIDMDAFYASCEQLTRPTLKGRPVLVAGVSGRGVVAGASYEARKYGARSAMPTHR 61 Query: 63 ARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEV 122 A RL+G V++ PR AVY ASRRVF+ + V VVEQLS DEAF EP +L GA+ EV Sbjct: 62 AARLVGPKVVLVAPRRAVYSTASRRVFEVIARHVAVVEQLSIDEAFMEPAELAGASPEEV 121 Query: 123 EQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVR 182 + + LR +++ETGL +S+GAGSGKQ AKI SGLAKPDG+ V+ R E+ +L LPV Sbjct: 122 RAWADTLRATIKEETGLPSSIGAGSGKQYAKIGSGLAKPDGVFVIPRAEQLEILHPLPVS 181 Query: 183 RLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERA 242 +LWG+GPV E KL +GIET+G AAL++ EV LG V L LARGID+R VA RA Sbjct: 182 QLWGVGPVTEAKLASVGIETIGDFAALSEREVEIALGGAVAKHLWALARGIDNREVAPRA 241 Query: 243 EAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTR 302 EAKQIS+E T+ DLTT Q+ +AL A +H+RLL DGRG+RTV+VKL+ AD TR Sbjct: 242 EAKQISSEHTYPQDLTTAPQVNEALTRAAAESHRRLLHDGRGARTVSVKLRMADFRVETR 301 Query: 303 SATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD------ 356 SATLPYAT D P ++GPIRL+GV +SGL + Q+ LFP+LD Sbjct: 302 SATLPYATDDAETLAATAFKLVRYPDEVGPIRLVGVSYSGLEDALQDVLFPELDQVNSAG 361 Query: 357 -LAAETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFET 415 ++++ P H ++ P+G WR DV H E GHGW+QG GHG VTVRFET Sbjct: 362 SVSSDIEVGVSDHAEPVHVEITDAPSG--WRATQDVYHPEYGHGWIQGTGHGWVTVRFET 419 Query: 416 RGSGPGPARTFPIETSDITAANPVDSLDWPDFV 448 R +GPG RT ++ +D++AA+PVDSL W D++ Sbjct: 420 RATGPGRTRTLRVDDADLSAADPVDSLAWEDWL 452 >sp|A4QFK8|DPO4_CORGB Tax_Id=340322 (dinB)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 467 Score = 427 bits (1099), Expect = e-117 Identities = 240/463 (51%), Positives = 292/463 (63%), Gaps = 22/463 (4%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFAS EQLTRPT SYEAR FGARSAMPMHQA Sbjct: 3 RWVLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 + +G AVV+ PR VY ASRRVF V +VE+LS DE F EP L GA EV+ Sbjct: 63 KARVGFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEVK 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 Q+ E+LR +++ TGL +SVGAGSGKQIAKI SG AKPDG+ VV ++ LL LPV Sbjct: 123 QWAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDGVFVVPVDKQHDLLDPLPVGA 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +G+ET+G LAAL EV LGAT+G +L LARGIDDRPV RAE Sbjct: 183 LWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPVEPRAE 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DL T Q+ A+ AE AH+RLL+DGRG+RTV+VKL+ AD +RS Sbjct: 243 AKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADFRIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD------- 356 TL YAT D P ++GPIRL+GV FSGL E RQ+ LFP+LD Sbjct: 303 YTLSYATDDYATLEATAFRLARYPGEVGPIRLVGVSFSGLEESRQDILFPELDQQIIVPP 362 Query: 357 ---------LAAETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHG 407 + + +S E+ Q P ALS +WR DV H E GHGWVQGAGHG Sbjct: 363 APDTDYEVGVQSSSSSESTQVEAPQDVALS------MWRATQDVYHPEYGHGWVQGAGHG 416 Query: 408 VVTVRFETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQ 450 VV+VRFETR + G ++F ++ D+T A+P+DSLDW D+ + Sbjct: 417 VVSVRFETRSTTKGRTKSFSMDDPDLTPADPLDSLDWADWFAE 459 >sp|Q8NNP4|DPO4_CORGL Tax_Id=1718 (dinB)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 467 Score = 424 bits (1091), Expect = e-117 Identities = 239/463 (51%), Positives = 291/463 (62%), Gaps = 22/463 (4%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFAS EQLTRPT SYEAR FGARSAMPMHQA Sbjct: 3 RWVLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 + +G AVV+ PR VY ASRRVF V +VE+LS DE F EP L GA EV+ Sbjct: 63 KARVGFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEVK 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 Q+ E+LR +++ TGL +SVGAGSGKQIAKI SG AKPDG+ VV ++ LL LPV Sbjct: 123 QWAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDGVFVVPVDKQHDLLDPLPVGA 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +G+ET+G LAAL EV LGAT+G +L LARGIDDRPV RAE Sbjct: 183 LWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPVEPRAE 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DL T Q+ A+ AE AH+RLL+DGRG+RTV+VKL+ AD +RS Sbjct: 243 AKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADFRIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD------- 356 TL YAT D P ++GPIRL+GV FSGL E RQ+ LFP+LD Sbjct: 303 YTLSYATDDYATLEATAFRLARYPGEVGPIRLVGVSFSGLEESRQDILFPELDQQIIVPP 362 Query: 357 ---------LAAETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHG 407 + + +S E+ Q P ALS +W DV H E GHGWVQGAGHG Sbjct: 363 APDTDYEVGVQSSSSSESTQVEAPQDVALS------MWCATQDVYHPEYGHGWVQGAGHG 416 Query: 408 VVTVRFETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQ 450 VV+VRFETR + G ++F ++ D+T A+P+DSLDW D+ + Sbjct: 417 VVSVRFETRSTTKGRTKSFSMDDPDLTPADPLDSLDWADWFAE 459 >tr|C4LI62|C4LI62_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium kroppenstedtii] Length = 512 Score = 424 bits (1091), Expect = e-117 Identities = 233/490 (47%), Positives = 299/490 (61%), Gaps = 37/490 (7%) Query: 2 ESRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMH 61 + RWVLH+DMDAFFAS EQLTRPT SYEARVFG SAMPM Sbjct: 23 QHRWVLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARVFGVHSAMPMM 82 Query: 62 QARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAE 121 +ARRL+G + + PR VY ASRRV + +R ++EQLS DEAF EP +L GA Sbjct: 83 RARRLVGYAGITVRPRFDVYKTASRRVMEILREEAGLIEQLSVDEAFMEPDELSGATPDG 142 Query: 122 VEQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPV 181 V ++ LR+R+R+ETGL +SVGAG+GKQ AKI SGLAKPDG V+ Q++ +L LPV Sbjct: 143 VRKWAGHLRKRIREETGLPSSVGAGAGKQFAKIGSGLAKPDGTFVIPVQDQHAILDPLPV 202 Query: 182 RRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAER 241 R+LWGIGPVAE KL +G+ T+ Q A ++ +V LG T GPAL LA+G D RPVA R Sbjct: 203 RKLWGIGPVAEAKLADIGVRTIEQFARMSRTDVEMALGKTNGPALWLLAQGHDPRPVAPR 262 Query: 242 AEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLT 301 AEAKQ+S+ESTF+ D+TTLD + + + AH+RL+ DGRG+RTVTVKLK+AD T Sbjct: 263 AEAKQVSSESTFSDDVTTLDGVDEGIRAALTKAHRRLMNDGRGARTVTVKLKRADFERHT 322 Query: 302 RSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAA-- 359 RS TLP++TTD DP G +RL+GV SGL RQE+LFPDLD + Sbjct: 323 RSETLPFSTTDWDVLYRVASRLAADPAVFGAVRLVGVSLSGLESARQEALFPDLDPSQGA 382 Query: 360 --ETSEEAHQDFHPSHGALSSTPAG---------------------------------AV 384 EA DF + ++TP +V Sbjct: 383 DYRALTEADSDFEAGVVSAANTPTASVDSDELANASTEADAEQPEFDGAPTDASHTETSV 442 Query: 385 WRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPARTFPIETSDITAANPVDSLDW 444 W DV H + GHGWVQG+GHGVV+VRFETR +G G R+FP++T ++ A+P+DSL+W Sbjct: 443 WPATIDVYHPKYGHGWVQGSGHGVVSVRFETRTTGKGLVRSFPVDTPELIPADPIDSLEW 502 Query: 445 PDFVGQLRVE 454 D++G + E Sbjct: 503 GDWLGLVHGE 512 >tr|C6RAV1|C6RAV1_9CORY Tax_Id=553206 SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium tuberculostearicum SK141] Length = 462 Score = 423 bits (1088), Expect = e-116 Identities = 230/456 (50%), Positives = 292/456 (64%), Gaps = 11/456 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEARV+GA SAMPM++A Sbjct: 3 RWVLHIDMDAFFASVEQLTRPTLQGRPVLVGGTSGRGVVAGASYEARVYGAHSAMPMYRA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 ++L+G+ AVV+ PR AVY ASRRVF + V V+EQLS DEAF EP L GA+ EV+ Sbjct: 63 QQLVGLRAVVVQPRRAVYSAASRRVFGIIAQHVEVIEQLSIDEAFMEPAALEGASAEEVK 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++ ++LR +R+ETGL S+GAGSGKQ AKI SG AKPDG V+ + + +L L V + Sbjct: 123 RWADELRALIREETGLPCSIGAGSGKQFAKIGSGEAKPDGTFVIPAERQLDMLHPLAVNK 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +G+ET+GQLAA+ EV +G+ VG L +LARGIDDR VA RA Sbjct: 183 LWGVGPVTGAKLKSIGVETIGQLAAMTRKEVEISIGSVVGLQLWQLARGIDDREVAPRAI 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQIS E T+ DL T ++ A+ AE AH+RLL+DGRG+RTVTVKL+ AD +RS Sbjct: 243 SKQISTEHTYPKDLQTAPEVDAAIARAAEGAHRRLLKDGRGARTVTVKLRMADFHIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TLPYAT D P ++GPIRL+GV +SGL RQ+ LFP+LD Sbjct: 303 TTLPYATDDAAVLTAAAFKLARYPDELGPIRLVGVSYSGLEAARQDVLFPELDREIVRPA 362 Query: 364 EAHQDFHP--SHGALSSTPAGAV---------WRIGDDVTHRELGHGWVQGAGHGVVTVR 412 A D+ S A + PA V W DV H E GHGW+QGAGHGVV+VR Sbjct: 363 PADTDYETGVSDDATPAIPAPTVTVEEETDNQWHATQDVFHPEYGHGWIQGAGHGVVSVR 422 Query: 413 FETRGSGPGPARTFPIETSDITAANPVDSLDWPDFV 448 FETR +GPG ++F + + A+P+DSLDW D++ Sbjct: 423 FETRATGPGRTKSFAADDPALVPADPLDSLDWQDWL 458 >tr|C2BNK8|C2BNK8_9CORY Tax_Id=525264 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium pseudogenitalium ATCC 33035] Length = 462 Score = 422 bits (1084), Expect = e-116 Identities = 229/456 (50%), Positives = 291/456 (63%), Gaps = 11/456 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEARV+GA SAMPM++A Sbjct: 3 RWVLHIDMDAFFASVEQLTRPTLQGRPVLVGGTSGRGVVAGASYEARVYGAHSAMPMYRA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 ++L+G+ AVV+ PR AVY ASRRVF + V V+EQLS DEAF EP L GA+ EV+ Sbjct: 63 QQLVGLRAVVVQPRRAVYSAASRRVFGIIAQHVEVIEQLSIDEAFMEPAALEGASAEEVK 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++ ++LR +R+ETGL S+GAGSGKQ AKI SG AKPDG V+ + + +L L V + Sbjct: 123 RWADELRALIREETGLPCSIGAGSGKQFAKIGSGEAKPDGTFVIPAERQLDMLHPLAVNK 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +G+ET+GQLAA+ EV +G+ VG L +LARGIDDR VA RA Sbjct: 183 LWGVGPVTGAKLKSIGVETIGQLAAMTRKEVEISIGSVVGLQLWQLARGIDDREVAPRAI 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQIS E T+ DL T ++ A+ AE AH+RLL+DGRG+RTVTVKL+ AD +RS Sbjct: 243 SKQISTEHTYPKDLQTAPEVDAAITRAAEGAHRRLLKDGRGARTVTVKLRMADFHIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TLPYAT D P ++GPIRL+GV +SGL RQ+ LFP+LD Sbjct: 303 TTLPYATDDAAVLTAAAFKLARYPDELGPIRLVGVSYSGLETARQDVLFPELDREIVRPA 362 Query: 364 EAHQDFHP--SHGALSSTPAGAV---------WRIGDDVTHRELGHGWVQGAGHGVVTVR 412 A D+ S A + PA V W DV H + GHGW+QGAGHGVV+VR Sbjct: 363 PADTDYETGVSDDATPAIPAPTVTVEEETDNQWHATQDVFHPDYGHGWIQGAGHGVVSVR 422 Query: 413 FETRGSGPGPARTFPIETSDITAANPVDSLDWPDFV 448 FETR +GPG ++F + A+P+DSLDW D++ Sbjct: 423 FETRATGPGRTKSFAANDPALVPADPLDSLDWQDWL 458 >tr|Q8FNV3|Q8FNV3_COREF Tax_Id=152794 SubName: Full=Putative DNA-damage-inducible protein P;[Corynebacterium efficiens] Length = 475 Score = 420 bits (1080), Expect = e-115 Identities = 230/466 (49%), Positives = 290/466 (62%), Gaps = 11/466 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR FGARSAMPMH+A Sbjct: 10 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGASGRGVVAGASYEARRFGARSAMPMHEA 69 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R +G+ +VV+ PR VY AS+RVF + +VE+LS DE + EP +L GA+ EV Sbjct: 70 RARVGLASVVVTPRHVVYSAASKRVFQIIEQRAGMVERLSIDEGYMEPEELVGASPGEVR 129 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + E LR +R +TGL ASVGAGSGKQ AKI SG AKPDG+ V+ +++Q L+G +PV Sbjct: 130 AWAEALRAEIRAQTGLPASVGAGSGKQFAKIGSGKAKPDGVFVIPVEKQQELVGPMPVSM 189 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV + KL +G+ T+ LAAL+ EV LG T+G +L LARG+DDRPV RAE Sbjct: 190 LWGVGPVTQAKLTTMGVATIDDLAALSAKEVEISLGPTIGLSLWNLARGVDDRPVEPRAE 249 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DLT+ Q+ A+ + AH+RLLRDGRG+RTV+VKL+ D +RS Sbjct: 250 AKQISQEHTYERDLTSRAQVDAAIRRATKGAHRRLLRDGRGARTVSVKLRMDDFRIESRS 309 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TL YAT D+ P + GPIRL+GVGFSGL E RQ+ LFP+LD T Sbjct: 310 HTLSYATDDLATLEATAFRLVRYPEETGPIRLVGVGFSGLEENRQDILFPELDQQIVTPA 369 Query: 364 EAHQDFH-----------PSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVR 412 A D+ +S P +WR DV H E GHGWVQGAGHGVV+VR Sbjct: 370 PADTDYESGVRSSTTAIPTDSSQVSDEPRTRIWRATQDVRHPEFGHGWVQGAGHGVVSVR 429 Query: 413 FETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAAD 458 FETR + G R F ++ + A+P+DSLDW D++ R + D Sbjct: 430 FETRTTTRGLTRNFAMDDPLLQPADPLDSLDWGDWLADNRRDPDGD 475 >tr|C8NPZ9|C8NPZ9_COREF Tax_Id=196164 SubName: Full=DNA polymerase IV (Pol IV); EC=2.7.7.7;[Corynebacterium efficiens YS-314] Length = 468 Score = 420 bits (1080), Expect = e-115 Identities = 230/466 (49%), Positives = 290/466 (62%), Gaps = 11/466 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR FGARSAMPMH+A Sbjct: 3 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGASGRGVVAGASYEARRFGARSAMPMHEA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R +G+ +VV+ PR VY AS+RVF + +VE+LS DE + EP +L GA+ EV Sbjct: 63 RARVGLASVVVTPRHVVYSAASKRVFQIIEQRAGMVERLSIDEGYMEPEELVGASPGEVR 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + E LR +R +TGL ASVGAGSGKQ AKI SG AKPDG+ V+ +++Q L+G +PV Sbjct: 123 AWAEALRAEIRAQTGLPASVGAGSGKQFAKIGSGKAKPDGVFVIPVEKQQELVGPMPVSM 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV + KL +G+ T+ LAAL+ EV LG T+G +L LARG+DDRPV RAE Sbjct: 183 LWGVGPVTQAKLTTMGVATIDDLAALSAKEVEISLGPTIGLSLWNLARGVDDRPVEPRAE 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DLT+ Q+ A+ + AH+RLLRDGRG+RTV+VKL+ D +RS Sbjct: 243 AKQISQEHTYERDLTSRAQVDAAIRRATKGAHRRLLRDGRGARTVSVKLRMDDFRIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TL YAT D+ P + GPIRL+GVGFSGL E RQ+ LFP+LD T Sbjct: 303 HTLSYATDDLATLEATAFRLVRYPEETGPIRLVGVGFSGLEENRQDILFPELDQQIVTPA 362 Query: 364 EAHQDFH-----------PSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVR 412 A D+ +S P +WR DV H E GHGWVQGAGHGVV+VR Sbjct: 363 PADTDYESGVRSSTTAIPTDSSQVSDEPRTRIWRATQDVRHPEFGHGWVQGAGHGVVSVR 422 Query: 413 FETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAAD 458 FETR + G R F ++ + A+P+DSLDW D++ R + D Sbjct: 423 FETRTTTRGLTRNFAMDDPLLQPADPLDSLDWGDWLADNRRDPDGD 468 >tr|C2GKM3|C2GKM3_9CORY Tax_Id=548478 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium glucuronolyticum ATCC 51866] Length = 472 Score = 420 bits (1079), Expect = e-115 Identities = 231/451 (51%), Positives = 281/451 (62%), Gaps = 5/451 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFAS EQLTRPT SYEAR FGA SAMPMHQA Sbjct: 3 RWVLHIDMDAFFASCEQLTRPTLRGKPVLVGGVNGRGVVAGASYEARAFGAHSAMPMHQA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R L+G TAV + PR AVY SRRV + V+EQLS DEAF EP L GA+ EV Sbjct: 63 RALVGYTAVSVSPRKAVYSAVSRRVMRLIEHEAGVIEQLSVDEAFMEPASLVGASVDEVV 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + +LR ++R G+ +SVGAG+GKQ AKI SGLAKPDG V+++ +++ +LG LPVR Sbjct: 123 AWSNELREKIRTTIGIPSSVGAGTGKQYAKIGSGLAKPDGTFVISKDKQEEILGPLPVRS 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPVAE KL LGI T+ + AA++ EV LG VG L LARG DDR VA RA Sbjct: 183 LWGVGPVAEAKLRGLGITTIAEFAAMSKKEVEVTLGKAVGATLWELARGHDDRVVAPRAV 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQ+SAE T+A DLTT+D++ A+ A AH RLL+DGRG+RTVTVKLK AD +RS Sbjct: 243 AKQVSAEQTYARDLTTVDEVDKAVRRAAHDAHVRLLKDGRGARTVTVKLKMADFHIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDL-----A 358 TLPYAT + P ++G IRL+GV FSGL E Q+ LFP+LD Sbjct: 303 YTLPYATDEFDTLFAAAMRITRYPSEVGAIRLVGVSFSGLEEALQDVLFPELDQDIVREE 362 Query: 359 AETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGS 418 T +A DF + WR DV H E GHGWVQG G G+VTVRFETR + Sbjct: 363 VVTEYDAGVDFPEVTVNAEGEAVVSRWRATQDVWHPEFGHGWVQGTGGGIVTVRFETRTT 422 Query: 419 GPGPARTFPIETSDITAANPVDSLDWPDFVG 449 GPG TF ++ ++ A+P+ SLDW D G Sbjct: 423 GPGRIHTFDVDDEELQPADPLGSLDWEDTEG 453 >tr|C8NTM3|C8NTM3_9CORY Tax_Id=585529 (ppnK)SubName: Full=ATP-NAD kinase; EC=2.7.1.23;[Corynebacterium genitalium ATCC 33030] Length = 463 Score = 419 bits (1077), Expect = e-115 Identities = 230/451 (50%), Positives = 286/451 (63%), Gaps = 5/451 (1%) Query: 3 SRWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQ 62 SRWVLH+DMDAF+AS EQLTRPT SYEAR FGARSAMP ++ Sbjct: 5 SRWVLHIDMDAFYASCEQLTRPTLKGRPVLVAGVTGRGVVAGASYEARKFGARSAMPTYR 64 Query: 63 ARRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEV 122 A RL+G AV++ PR VY ASRRVF+ + V VVEQLS DEAF EP +L GA EV Sbjct: 65 ATRLVGPQAVLVTPRRKVYTTASRRVFEIIARHVDVVEQLSIDEAFMEPHELQGATPDEV 124 Query: 123 EQFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVR 182 + LR ++R+ETGL +S+GAGSGKQ AKI SGLAKPDG ++ + ++ +L LPV+ Sbjct: 125 RDWANTLRDQIREETGLPSSIGAGSGKQYAKIGSGLAKPDGTYIIPKAQQTDILHPLPVK 184 Query: 183 RLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERA 242 LWG+GPV KL GIET+G AA+ + EV LG VG L LARGIDDR V RA Sbjct: 185 ELWGVGPVTGAKLTGAGIETIGDFAAMTEREVDIALGGVVGKQLWMLARGIDDRDVKPRA 244 Query: 243 EAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTR 302 E+KQISAE T+ DLTT ++ A+ A AH+RLL DGRG+RT TVKLK AD +R Sbjct: 245 ESKQISAEHTYPQDLTTTAEVEAAIRRAASDAHRRLLIDGRGARTATVKLKMADFHIESR 304 Query: 303 SATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETS 362 S TLPYAT D+ P ++GPIRL+GVGFSGL +V Q++LFP+LD A Sbjct: 305 STTLPYATDDLETLVAAAFRIARYPDELGPIRLVGVGFSGLEDVMQDTLFPELDQAIIPH 364 Query: 363 EEAHQDFHPSHGALSSTP-----AGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRG 417 ++ S A + P A W DV H E GHGW+QGAGHG VTVRFETR Sbjct: 365 RVIPEETGVSDLADAPLPAFEEAAKTGWAATQDVFHPEYGHGWIQGAGHGFVTVRFETRA 424 Query: 418 SGPGPARTFPIETSDITAANPVDSLDWPDFV 448 +GPG + F + D+ A+PV+SL W +++ Sbjct: 425 TGPGKVKNFRADDPDLVPADPVNSLAWEEWL 455 >tr|C3PHE2|C3PHE2_CORA7 Tax_Id=548476 (dinX)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium aurimucosum] Length = 492 Score = 418 bits (1075), Expect = e-115 Identities = 238/478 (49%), Positives = 297/478 (62%), Gaps = 15/478 (3%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR +GA SAMPM +A Sbjct: 14 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARAYGAHSAMPMFRA 73 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 ++L+G AVV+ PR AVY ASRRVF + V+EQLS DEAF EP L GA AEV Sbjct: 74 QQLVGYRAVVVQPRRAVYSAASRRVFGIIAQHAGVIEQLSIDEAFMEPAALLGATPAEVR 133 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++ E+LRR +R ETGL +S+GAG+GKQ AKIASG AKPDG VV ++ + L+ LPV + Sbjct: 134 EWSENLRRVIRTETGLPSSIGAGAGKQSAKIASGEAKPDGTFVVPQERFKELIHPLPVGK 193 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG GPV ++KL +G+ET+GQLAA++ EV LG VG L LA+GID+RPVA RA Sbjct: 194 LWGAGPVTQQKLAAIGVETIGQLAAMSRKEVEISLGGVVGVQLWELAQGIDERPVAPRAI 253 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DL T ++ AL A AH RLL+DGRG+RTVTVKL+ AD +RS Sbjct: 254 AKQISTEFTYPTDLRTAAEVDAALIRAAHGAHSRLLKDGRGARTVTVKLRMADFHIESRS 313 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-----LA 358 ATL YAT D+ P ++GPIRL+GV +SGL E RQ+ LFP+LD A Sbjct: 314 ATLSYATDDLKVLEAKALSLARYPEELGPIRLVGVSYSGLEEARQDVLFPELDREIVRQA 373 Query: 359 AETS-EEAHQDFHP---------SHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGV 408 +T E D+ P S A + + WR DV H + GHGW+QGAGHGV Sbjct: 374 PDTDYETGVSDYLPGSTSAPVNVSSTADAEESSSCRWRATQDVYHPDFGHGWIQGAGHGV 433 Query: 409 VTVRFETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQLRVENAADTSTPAVDD 466 V+VRFETR +GPG R+F E ++ A+P++SL W D E P +D Sbjct: 434 VSVRFETRATGPGFVRSFAAEEEELRPADPLNSLAWEDIPPDEDAEPEEAVEVPPRED 491 >tr|C0VV50|C0VV50_9CORY Tax_Id=548477 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium glucuronolyticum ATCC 51867] Length = 472 Score = 418 bits (1075), Expect = e-115 Identities = 231/451 (51%), Positives = 282/451 (62%), Gaps = 5/451 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFAS EQLTRPT SYEAR FGA SAMPMHQA Sbjct: 3 RWVLHIDMDAFFASCEQLTRPTLRGKPVLVGGVNGRGVVAGASYEARAFGAHSAMPMHQA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R L+G TAV + PR AVY SRRV + V+EQLS DEAF EP L GA+ EV Sbjct: 63 RALVGYTAVSVSPRKAVYSAVSRRVMRLIEHEAGVIEQLSVDEAFMEPASLVGASVDEVV 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + +LR ++R G+ +SVGAG+GKQ AKI SGLAKPDG V+++ +++ +LG LPVR Sbjct: 123 AWSNELREKIRTTIGIPSSVGAGTGKQYAKIGSGLAKPDGTFVISKDKQEEILGPLPVRS 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPVAE KL LGI T+ + AA++ EV LG VG L LARG DDR VA RA Sbjct: 183 LWGVGPVAEAKLRGLGITTIAEFAAMSKKEVEVTLGKAVGATLWELARGHDDRVVAPRAV 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQ+SAE T+A DLTT+D++ A+ A AH RLL+DGRG+RTVTVKLK D +RS Sbjct: 243 AKQVSAEQTYARDLTTVDEVDKAVRRAAHDAHVRLLKDGRGARTVTVKLKMTDFHIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDL--DLAAE- 360 TLPYAT + P ++G IRL+GV FSGL E Q+ LFP+L D+ E Sbjct: 303 YTLPYATDEFDTLFAAAMRITRYPSEVGAIRLVGVSFSGLEEALQDVLFPELDQDIVREE 362 Query: 361 --TSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGS 418 T +A DF + WR DV H E GHGWVQG G G+VTVRFETR + Sbjct: 363 VITEYDAGVDFPEVTVNAEGEAVVSRWRATQDVWHPEFGHGWVQGTGGGIVTVRFETRTT 422 Query: 419 GPGPARTFPIETSDITAANPVDSLDWPDFVG 449 GPG TF ++ ++ A+P+ SLDW D G Sbjct: 423 GPGRIHTFDVDDEELQPADPLGSLDWEDTEG 453 >sp|Q6NGD8|DPO4_CORDI Tax_Id=1717 (dinB)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7;[Corynebacterium diphtheriae] Length = 451 Score = 417 bits (1071), Expect = e-114 Identities = 225/448 (50%), Positives = 289/448 (64%), Gaps = 7/448 (1%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWV+H+DMDAFFAS EQLTRPT SYEAR FGARSAMPM+QA Sbjct: 3 RWVIHVDMDAFFASCEQLTRPTLRGRPVLVGGASGRGVVAGASYEARTFGARSAMPMYQA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 + LIG+ VV+ PR AVY AS+RVF + + VE++S DE F EPP+L GA+ +EV+ Sbjct: 63 KALIGMRGVVVSPRFAVYRAASQRVFSILERMGGTVEKISIDEGFVEPPELYGASASEVD 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + + LR +RDETGL ASVG G+GKQ+AKI S LAKPDGI + A E + + LPV R Sbjct: 123 TWAQRLRAVIRDETGLPASVGGGAGKQVAKICSDLAKPDGIYLCAASEHEEKMYPLPVGR 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +LG+ET+G LA +++ E+ LG TVG +L RLA+G DDR VA RA Sbjct: 183 LWGVGPVTRTKLQQLGVETIGDLARMSEREIDISLGTTVGRSLWRLAQGHDDREVAPRAI 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T+ DL T + A+ + +H+RLL DGRG+RTV+VKL+ AD +RS Sbjct: 243 AKQISVEHTYPKDLVTSRAVDTAIIRASRESHRRLLDDGRGARTVSVKLRMADFRIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETS- 362 ATLPYAT ++ P ++GPIRL+GVG SGL + RQ+ LFP+LD Sbjct: 303 ATLPYATDNLDTVTATALKLARYPDEVGPIRLVGVGLSGLEDARQDILFPELDRVVPVKD 362 Query: 363 ---EEAHQDFHPSHGALSST---PAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETR 416 E D H S +S+T P WR D+ H + GHGWVQG GHG +TVRFETR Sbjct: 363 TDFEVGVSDPHDSDLEISTTDESPTAIGWRATQDIWHPDYGHGWVQGLGHGKITVRFETR 422 Query: 417 GSGPGPARTFPIETSDITAANPVDSLDW 444 +GPG RTF + +++A+P++SLDW Sbjct: 423 TTGPGKVRTFDTNDALLSSADPINSLDW 450 >tr|C2CNJ7|C2CNJ7_CORST Tax_Id=525268 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium striatum ATCC 6940] Length = 463 Score = 417 bits (1071), Expect = e-114 Identities = 224/459 (48%), Positives = 296/459 (64%), Gaps = 11/459 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR FG SAMP +A Sbjct: 3 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVAGVGGRGVVAGASYEARAFGVHSAMPTFRA 62 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 ++L+G+ VV+ PR VY AS++VF + V ++EQLS DEAF EP L GA EV+ Sbjct: 63 QQLVGLRGVVVQPRHVVYSAASKKVFKILAEHVGLIEQLSIDEAFMEPEALVGATAEEVK 122 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++ ++LR +R+ETGL +S+GAG+GKQ AKI SG AKPDG V+ +++ +L LPV + Sbjct: 123 EWADNLRELIREETGLPSSIGAGAGKQFAKIGSGEAKPDGTFVIPVEKQLEILHPLPVGK 182 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV KL +G+ET+GQLAA++ EV LGATVG L +LA+GIDDR VA RA Sbjct: 183 LWGVGPVTRTKLSAIGVETIGQLAAMSQKEVEISLGATVGMGLWKLAQGIDDRVVAPRAV 242 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQIS E T++ DL T+ + A+ AE AH+RLLRDGRG+RTV+VKL+ AD +RS Sbjct: 243 AKQISTEHTYSKDLLTVGAVDAAITRAAEGAHRRLLRDGRGARTVSVKLRMADFHIESRS 302 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-LAAETS 362 ATLPYAT D+ P ++GPIRL+GV +SGL RQ+ LFP+LD + Sbjct: 303 ATLPYATDDLETLKATAFKLARYPDELGPIRLVGVSYSGLETARQDVLFPELDRVVVRPP 362 Query: 363 EEAHQDFHP--SHGALSST--------PAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVR 412 +A D+ S +L ++ WR DV H + GHGW+QGAGHGVV+VR Sbjct: 363 SKADDDYEAGVSDNSLDTSRVEISIEDEPDTSWRATQDVYHPDYGHGWIQGAGHGVVSVR 422 Query: 413 FETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQL 451 FETR +GPG ++F + D+ A+P++SL WP+ +L Sbjct: 423 FETRATGPGRTKSFAADDPDLVPADPLESLAWPELFAEL 461 >tr|C0WKB5|C0WKB5_9CORY Tax_Id=525260 (dinB)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium accolens ATCC 49725] Length = 493 Score = 416 bits (1069), Expect = e-114 Identities = 225/455 (49%), Positives = 285/455 (62%), Gaps = 10/455 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR +GA SAMPM++A Sbjct: 35 RWVLHIDMDAFFASVEQLTRPTLQGRPVLVGGVGGRGVVAGASYEAREYGAHSAMPMYRA 94 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 ++L+G+ AVV+ PR AVY ASRRVF+ + V V+EQLS DEAF EP L GA E + Sbjct: 95 QQLVGLHAVVVSPRRAVYSAASRRVFEIISQHVEVIEQLSIDEAFMEPEALVGATADEAQ 154 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 Q+ + LR +R+ETGL S+GAGSGKQ AKI SG AKPDG V+ ++ +L LPV + Sbjct: 155 QWADGLRALIREETGLPCSIGAGSGKQFAKIGSGEAKPDGTYVIPADKQLEMLHPLPVGK 214 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV E KL +G+ET+G LAA+ EV +G+ VG L +LA+GIDDR VA RA Sbjct: 215 LWGVGPVTEAKLKGIGVETIGALAAMTQKEVEISIGSVVGLQLWQLAQGIDDREVAPRAI 274 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 +KQIS E T+ DL T+ + A+ AE AH+RLL+DGRG+RTVTVKL+ AD +RS Sbjct: 275 SKQISTEHTYPKDLLTVPDVDAAITRAAEGAHRRLLKDGRGARTVTVKLRMADFHIESRS 334 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TL YAT D+ P ++GPIRL+GV +SGL RQ+ LFP+LD Sbjct: 335 TTLAYATDDLEVLTAAAFKLARYPDELGPIRLVGVSYSGLEAARQDVLFPELDREIVRPV 394 Query: 364 EAHQDFHPSHGALSSTPAGAV----------WRIGDDVTHRELGHGWVQGAGHGVVTVRF 413 D+ S PA W DV H E GHGW+QG GHGVV+VRF Sbjct: 395 LPDSDYETGVSDDSPPPAPTTVVVEDDVEDQWHATQDVYHPEFGHGWIQGTGHGVVSVRF 454 Query: 414 ETRGSGPGPARTFPIETSDITAANPVDSLDWPDFV 448 ETR +GPG ++F D+ A+P+DSLDW D++ Sbjct: 455 ETRATGPGRTKSFAASDRDLVPADPLDSLDWQDWL 489 >tr|A4FMY2|A4FMY2_SACEN Tax_Id=405948 (dinX)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 435 Score = 404 bits (1038), Expect = e-110 Identities = 228/439 (51%), Positives = 280/439 (63%), Gaps = 10/439 (2%) Query: 9 LDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARRLIG 68 +DMDAFFASVEQLTRPT SYEAR +GARSAMPM +ARRL Sbjct: 1 MDMDAFFASVEQLTRPTVRGRPVLVGGLGPRGTVAGASYEARTYGARSAMPMAEARRLCP 60 Query: 69 VTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQFCED 128 V AVVLPPR VY S RV VR + VV+Q+S DEAF EP +L GA A VE+F Sbjct: 61 V-AVVLPPRFRVYSAVSERVLGIVRDVSEVVQQVSIDEAFMEPAELAGAEPATVERFAAR 119 Query: 129 LRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRLWGIG 188 LR RVR ETG+ AS+GAGSGKQ+AKIASGLAKPDG VV QEE LL LPVR+LWGIG Sbjct: 120 LRERVRRETGVTASIGAGSGKQLAKIASGLAKPDGALVVPPQEEIELLSALPVRKLWGIG 179 Query: 189 PVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEAKQIS 248 PV E KLHR+G+ T+G+LAAL +V ++LG G LHRLA GIDD PV ERAEAKQ+S Sbjct: 180 PVTEGKLHRIGVHTIGELAALHLGDVTSLLGQAHGTELHRLAHGIDDHPVEERAEAKQVS 239 Query: 249 AESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSATLPY 308 AE+TF +D+T +L + +A++AH+RL+ GR ++TVTVK++ +D +T++R+ T Sbjct: 240 AETTFDVDITDQGRLLAEVAGMADNAHRRLVSSGRAAKTVTVKVRDSDFTTISRAETFAS 299 Query: 309 ATTDVGXXXXXXXXXXXDPVQIG-PIRLLGVGFSGLSEVRQESLF--PDLDLAAETSEEA 365 AT+D V G PIRL+GV +SGL+ QE+LF P ++ T Sbjct: 300 ATSDAATLAAAARRLTSVAVPPGTPIRLVGVSYSGLANSEQEALFESPGAEVVVSTQSVE 359 Query: 366 HQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGPART 425 H + P WR GDDV H E GHGWVQGAG G VTVRFET +G G ART Sbjct: 360 HTQ------VPEAAPTARGWRAGDDVRHDEHGHGWVQGAGLGRVTVRFETATTGRGVART 413 Query: 426 FPIETSDITAANPVDSLDW 444 F + + +P+DSL W Sbjct: 414 FASDEPLLHPGDPLDSLGW 432 >tr|C5VD64|C5VD64_9CORY Tax_Id=553207 SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium matruchotii ATCC 14266] Length = 548 Score = 397 bits (1020), Expect = e-108 Identities = 221/459 (48%), Positives = 279/459 (60%), Gaps = 12/459 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR FGA SAMPMHQA Sbjct: 88 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARRFGAHSAMPMHQA 147 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R L+G +A+ + PR +Y VASRRVFD V V +EQ+S DEAF EP L GA +V Sbjct: 148 RALVGFSAITVQPRIGLYRVASRRVFDLVARNVGTIEQISVDEAFLEPIGLRGATPDDVA 207 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + +LR ++R ETGL +S+GAG GKQ AKIAS +AKP+G+ ++ + +E +LG LPVR+ Sbjct: 208 TWANNLRTQIRQETGLPSSIGAGPGKQSAKIASSMAKPNGLYIIPKDQEADILGPLPVRK 267 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV+E KL R+G++T+ LA L EV LG TVG L ARGID PV RAE Sbjct: 268 LWGVGPVSEIKLQRMGVKTIADLANLPQTEVEASLGKTVGLGLWHRARGIDTAPVEPRAE 327 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AK + AE T+ DLTT ++ A+D E A +RL DGRG+RTV VKLK AD TLTR+ Sbjct: 328 AKSVGAEYTYPHDLTTRPEVDAAIDRAFEAALRRLRTDGRGARTVNVKLKLADFHTLTRA 387 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 + PYA D P ++GPIRL+GV FS L QE LFPDL A T+ Sbjct: 388 QSFPYAIDDPAILRNATNLLVRYPHEVGPIRLVGVSFSNLDHPSQEMLFPDLHPATPTTA 447 Query: 364 EAH--------QDFHPSHGALSSTPAGAV----WRIGDDVTHRELGHGWVQGAGHGVVTV 411 H + +P ++ A + W DVTH + GHGW+QG GHG +TV Sbjct: 448 PTHSVDWEAGVRGNNPPDEDATNPAANLITTDGWYPTQDVTHPDHGHGWIQGIGHGKLTV 507 Query: 412 RFETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQ 450 RFETR + G TF D+ A+P+ SLDW D++ + Sbjct: 508 RFETRTTPRGHTCTFATTNPDLQPADPLTSLDWDDWLAE 546 >tr|C0E4P5|C0E4P5_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 464 Score = 395 bits (1015), Expect = e-108 Identities = 222/459 (48%), Positives = 278/459 (60%), Gaps = 12/459 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWVLH+DMDAFFASVEQLTRPT SYEAR FGA SAMPMHQA Sbjct: 4 RWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARRFGAHSAMPMHQA 63 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 R L+G +A+ + PR +Y VASRRVFD V V +EQ+S DEAF EP L GAA +V Sbjct: 64 RALVGFSAITVQPRIGLYRVASRRVFDLVARNVGTIEQISVDEAFLEPIGLRGAAPDDVA 123 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + +LR ++R ETGL +S+GAG GKQ AKIAS +AKP+G+ ++ + +E +LG LPVR+ Sbjct: 124 TWANNLRTQIRQETGLPSSIGAGPGKQSAKIASSMAKPNGLCIIPKDQEADILGPLPVRK 183 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWG+GPV+E KL R+G++T+ LA L +EV LG TVG L ARGID PV RAE Sbjct: 184 LWGVGPVSEIKLQRMGVKTIADLANLPQSEVEASLGKTVGLGLWHRARGIDTAPVEPRAE 243 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AK + AE T+ DLTT ++ A+D E A +RL DGRG+RTV VKLK AD TLTR+ Sbjct: 244 AKSVGAEYTYPHDLTTRPEVDAAIDRAFEAALRRLRTDGRGARTVNVKLKLADFHTLTRA 303 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDL-DLAAETS 362 + PYA D P ++GPIRL+GV FS L QE LFPDL T+ Sbjct: 304 QSFPYAIDDPAILRNATNLLVRYPHEVGPIRLVGVSFSNLDHPSQEMLFPDLHPTTPATA 363 Query: 363 EEAHQDFHPSHGALSSTPAGAV-----------WRIGDDVTHRELGHGWVQGAGHGVVTV 411 D+ +S A W DVTH + GHGW+QG GHG +TV Sbjct: 364 PTDSVDWETGVRGNNSPDEDATNPAANPITTDGWYPTQDVTHPDHGHGWIQGIGHGKLTV 423 Query: 412 RFETRGSGPGPARTFPIETSDITAANPVDSLDWPDFVGQ 450 RFETR + G RTF D+ A+P+ SLDW D++ + Sbjct: 424 RFETRTTPRGHTRTFATTNPDLQPADPLTSLDWDDWLAE 462 >tr|Q4JW84|Q4JW84_CORJK Tax_Id=306537 (dinX)SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium jeikeium] Length = 448 Score = 362 bits (930), Expect = 4e-98 Identities = 214/446 (47%), Positives = 258/446 (57%), Gaps = 12/446 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWV H+DMDAFFASVEQLTRPT SYEAR FGARSAMPM QA Sbjct: 2 RWVAHIDMDAFFASVEQLTRPTLRDRPVLVGGLGGRGVVAGASYEARAFGARSAMPMGQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RL AVV+ PR VY ASRR+F +R VVEQLS DE F EP L A E Sbjct: 62 VRLCNNRAVVVKPRKEVYAAASRRIFQVIRAHAGVVEQLSVDEGFAEPQGLDSAE--EAR 119 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + E+L+ RV +ETGL ASVG + K AK+AS LAKP G+ VV + + PV Sbjct: 120 AWAENLQARVEEETGLPASVGMAASKLDAKMASDLAKPHGVFVVPPEARMEVFADRPVGD 179 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 +WGIG VA+ KLH +GI+T+GQ A +V LG+ VG + R+A G D RPVA RA Sbjct: 180 VWGIGKVAQGKLHTMGIDTIGQFVAADTTDVRGALGS-VGVEVQRMAAGDDPRPVAPRAP 238 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQ+SAE T +D T + L A H+RLL+DGR +RTVTVK + D T+S Sbjct: 239 AKQVSAEKTLQVDARTTAEAMRVLHETALAMHRRLLKDGRAARTVTVKTRTTDFQLHTKS 298 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-----LA 358 A LP T D P Q G RL+GV SGL RQE LFP+LD +A Sbjct: 299 AGLPAPTEDFDKIFALAQRLMPRPEQAGAFRLVGVSVSGLVADRQELLFPELDGPPVPIA 358 Query: 359 AETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGS 418 A T +A S +T VW DV+H E GHGWVQGAG+GVV+VRFET + Sbjct: 359 APTDSDAGF----SSFVDDATTVRPVWHATQDVSHVEFGHGWVQGAGNGVVSVRFETAAT 414 Query: 419 GPGPARTFPIETSDITAANPVDSLDW 444 GPG RTF I+ D++ A+P+DSL W Sbjct: 415 GPGKTRTFRIDDEDLSPADPLDSLAW 440 >tr|C8RRC4|C8RRC4_CORJE Tax_Id=525262 (dinX)SubName: Full=DNA polymerase IV (Pol IV); EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734] Length = 448 Score = 362 bits (929), Expect = 6e-98 Identities = 214/446 (47%), Positives = 258/446 (57%), Gaps = 12/446 (2%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWV H+DMDAFFASVEQLTRPT SYEAR FGARSAMPM QA Sbjct: 2 RWVAHIDMDAFFASVEQLTRPTLRDRPVLVGGLGGRGVVAGASYEARAFGARSAMPMGQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RL AVV+ PR VY ASRR+F +R VVEQLS DE F EP L A E Sbjct: 62 VRLCNNRAVVVKPRKEVYAAASRRIFQVIRAHAGVVEQLSVDEGFAEPQGLDSAE--EAR 119 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 + E+L+ RV +ETGL ASVG + K AK+AS LAKP G+ VV + + PV Sbjct: 120 AWAENLQARVEEETGLPASVGMAASKLDAKMASDLAKPHGVFVVPPEARMEVFADRPVGD 179 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 +WGIG VA+ KLH +GI+T+GQ A +V LG+ VG + R+A G D RPVA RA Sbjct: 180 VWGIGKVAQGKLHTMGIDTIGQFVAADTTDVRGALGS-VGVEVQRMAAGDDPRPVAPRAP 238 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQ+SAE T +D T + L A H+RLL+DGR +RTVTVK + D T+S Sbjct: 239 AKQVSAEKTLQVDARTTAEAMRVLHETALAMHRRLLKDGRAARTVTVKTRTTDFQLHTKS 298 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLD-----LA 358 A LP T D P Q G RL+GV SGL RQE LFP+LD +A Sbjct: 299 AGLPAPTEDFDKIFALAQRLMPRPEQAGAFRLVGVSVSGLVADRQELLFPELDGPPVPIA 358 Query: 359 AETSEEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGS 418 A T +A S +T VW DV+H E GHGWVQGAG+GVV+VRFET + Sbjct: 359 APTDSDAGF----SSFIDDATTVRPVWHATQDVSHVEFGHGWVQGAGNGVVSVRFETAAT 414 Query: 419 GPGPARTFPIETSDITAANPVDSLDW 444 GPG RTF I+ D++ A+P+DSL W Sbjct: 415 GPGKTRTFRIDDEDLSPADPLDSLAW 440 >tr|B1VHB3|B1VHB3_CORU7 Tax_Id=504474 SubName: Full=DNA polymerase IV; EC=2.7.7.7;[Corynebacterium urealyticum] Length = 477 Score = 339 bits (869), Expect = 5e-91 Identities = 209/470 (44%), Positives = 263/470 (55%), Gaps = 25/470 (5%) Query: 4 RWVLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQA 63 RWV H+DMDAF+ASVEQLTRPT SYEAR +GARSAMPMHQA Sbjct: 2 RWVAHIDMDAFYASVEQLTRPTLRDRPVLVGGMSGRGVVAGASYEARAYGARSAMPMHQA 61 Query: 64 RRLIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVE 123 RL A+V+ PR +Y + SRR+F + VVEQLS DE F EP L AA A Sbjct: 62 IRLCRNRAIVIQPRSVLYKMISRRIFQVIAEHAGVVEQLSVDEGFAEPQGLVDAAAAR-- 119 Query: 124 QFCEDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRR 183 ++ EDL+R V + T L S+G S K AK+AS LAKP GI VV ++ G PV Sbjct: 120 RWAEDLQRAVEEATELPCSIGMASTKLDAKMASDLAKPHGIFVV--EDRMATFGPRPVGD 177 Query: 184 LWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAE 243 LWGIG VA+ KL +G+ T+ Q + +V ++LG VG + +A G D RPVA RAE Sbjct: 178 LWGIGRVAQAKLADIGVHTIQQFVDMDPTDVKSLLGK-VGLEVQVMAGGDDPRPVAPRAE 236 Query: 244 AKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRS 303 AKQISAE T +D T + + ++ A A++RL +DGR +RT+TVK++ +D + TRS Sbjct: 237 AKQISAEQTLPVDARTYRDVLNIMELSARQAYRRLRKDGRAARTITVKIRTSDFALHTRS 296 Query: 304 ATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDLDLAAETSE 363 TLP T D P G +RL+GVGFSGLS RQE LFP+L A + Sbjct: 297 TTLPAPTDDFEQLLRAARAVLPRPEDSGAVRLVGVGFSGLSHDRQEMLFPELSHPAVPHQ 356 Query: 364 EAHQDFHPSHG----------ALSSTPAGAV------WRIGDDVTHRELGHGWVQGAGHG 407 Q G A S P GA W+ DV H + GHGWVQG+G G Sbjct: 357 SVTQSATTVAGRGEVPAGAEAAGESHPGGAAERKESRWQQTQDVWHPDYGHGWVQGSGVG 416 Query: 408 VVTVRFETRGSGPGPARTFPIETSDITAANPVDSLDW----PDFVGQLRV 453 VVTVRFETR +GPG TF + + A+P+DSL W D GQL + Sbjct: 417 VVTVRFETRETGPGRIATFDTDDPQLQPADPLDSLAWGTDADDGSGQLEL 466 >sp|Q9AK82|DPO4_STRCO Tax_Id=1902 (dinB)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7;[Streptomyces coelicolor] Length = 479 Score = 290 bits (743), Expect = 2e-76 Identities = 181/437 (41%), Positives = 239/437 (54%), Gaps = 7/437 (1%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 +LHLDMDAFFASVEQ ++P+ SYEARVFG SAMPM QARR Sbjct: 7 ILHLDMDAFFASVEQASKPSLRGKAVVVGGLGPRGVVATCSYEARVFGVHSAMPMGQARR 66 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAFGEPPQLGGAATAEVEQF 125 L A L PR +Y S +V +R L P+VE LS DEAF + G A AE + Sbjct: 67 L-APHAAYLVPRFELYRSISEQVMRLLRELSPLVEPLSLDEAFVDLDAGGAARDAETARL 125 Query: 126 C-EDLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGGLPVRRL 184 LR +R TGL SVG + K +AKIAS AKPDG+ ++ E+ +L + VR L Sbjct: 126 AGTKLRTDIRTVTGLTGSVGLAASKMLAKIASEAAKPDGLVLIPPGTERAMLEPMTVRTL 185 Query: 185 WGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPVAERAEA 244 G+GP + L R GI TVG++A + E+ +LG G AL+ +A D+RPV E Sbjct: 186 PGVGPATGDHLRRAGITTVGEIAEAGEDELVRLLGKAHGHALYAMALARDERPVVAERET 245 Query: 245 KQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMSTLTRSA 304 K +S E T+ +D+ ++ + +A+ +RL G RT+ +K+++ D STLTRS Sbjct: 246 KSVSVEDTYDVDIHDRVRVGVEVGRLADRCVRRLRASGLSGRTIVLKVRRYDFSTLTRSE 305 Query: 305 TLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESLFPDL--DLAAETS 362 TL T D G +RLLGVG SGL++ QE LF D A E + Sbjct: 306 TLRGPTDDPAVVREAAARLLDSVDTTGGVRLLGVGVSGLADYTQEDLFAQAAGDRAEEPA 365 Query: 363 EEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVVTVRFETRGSGPGP 422 EE + +H S +PA W G DV H ELGHGWVQG+G G VTVRFET SG G Sbjct: 366 EEPGTEPAEAH---SPSPAERRWPSGHDVRHTELGHGWVQGSGLGRVTVRFETPYSGVGR 422 Query: 423 ARTFPIETSDITAANPV 439 RTF ++ ++T A+P+ Sbjct: 423 VRTFLVDDPELTPADPL 439 >tr|C7NHN5|C7NHN5_KYTSD Tax_Id=478801 SubName: Full=Nucleotidyltransferase/DNA polymerase involved in DNA repair;[Kytococcus sedentarius] Length = 458 Score = 288 bits (737), Expect = 1e-75 Identities = 187/449 (41%), Positives = 241/449 (53%), Gaps = 16/449 (3%) Query: 6 VLHLDMDAFFASVEQLTRPTXXXXXXXXXXXXXXXXXXXXSYEARVFGARSAMPMHQARR 65 VLH+D+DAFFA+VEQ +P+ SYEARV+G RSAMP QAR Sbjct: 7 VLHVDLDAFFAAVEQRDKPSLRGKPVVVGGTGRRGVVSTASYEARVYGVRSAMPGWQARA 66 Query: 66 LIGVTAVVLPPRGAVYGVASRRVFDTVRGLVPVVEQLSFDEAF-----GEPP-QLGGAAT 119 + A L R A Y +S+ DT+R L PVVEQ+S DEA+ GE P + A Sbjct: 67 QLPGGAAFLSGRFAAYRASSQAALDTLRALAPVVEQVSIDEAYADLALGESPWPVETWAR 126 Query: 120 AEVEQFCEDLRRRVRDETG-LIASVGAGSGKQIAKIASGLAKPDGIRVVARQEEQLLLGG 178 ++ E LR + + TG L ASVG GS K +AK+AS AKPDG RVV EE+ L Sbjct: 127 SDAEAVAARLRAAITEATGGLTASVGIGSSKMMAKMASEAAKPDGYRVVWPGEEEDFLAD 186 Query: 179 LPVRRLWGIGPVAEEKLHRLGIETVGQLAALADAEVANILGATVGPALHRLARGIDDRPV 238 LPVR L G+GP E+L G+ TV L + ++ +ILG G +H LARG+D RP+ Sbjct: 187 LPVRALPGVGPATAERLGTFGVRTVQDLRRVTVTDLVSILGEAWGHGVHDLARGVDHRPI 246 Query: 239 AERAEAKQISAESTFAIDLTTLDQLRDALDPIAEHAHQRLLRDGRGSRTVTVKLKKADMS 298 EAK +SAE TFA DLT + ++ L +AE RL + G RTV+VKL++ D S Sbjct: 247 VTHREAKSVSAEETFATDLTDVREVEAELRLLAERVSGRLGKAGLFGRTVSVKLRRHDFS 306 Query: 299 TLTRSATLPYATTDVGXXXXXXXXXXXDPVQIGPIRLLGVGFSGLSEVRQESL----FPD 354 T RS TL + T +V +RLLGVG SG E QE L F Sbjct: 307 THLRSTTLRHGTDEVAVIAAAAVRLVGSIGVGDGVRLLGVGVSGFVEHSQEELALEVFEP 366 Query: 355 LDLAAETS-----EEAHQDFHPSHGALSSTPAGAVWRIGDDVTHRELGHGWVQGAGHGVV 409 ++AE+ E+A +D A S+ W G DV H E G GWV G+G G V Sbjct: 367 AGVSAESHTSDEVEDAPEDLLDDPDAHSARLGRVEWPTGADVVHAEHGPGWVWGSGLGRV 426 Query: 410 TVRFETRGSGPGPARTFPIETSDITAANP 438 TVRFE +GPGP RTF ++ D+ A+P Sbjct: 427 TVRFEGPRTGPGPVRTFRVDDPDLAPADP 455 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,236,482,043 Number of extensions: 132794798 Number of successful extensions: 362585 Number of sequences better than 10.0: 3453 Number of HSP's gapped: 357560 Number of HSP's successfully gapped: 3576 Length of query: 470 Length of database: 3,846,993,858 Length adjustment: 141 Effective length of query: 329 Effective length of database: 2,257,190,235 Effective search space: 742615587315 Effective search space used: 742615587315 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 82 (36.2 bits)