BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2369 (1180 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HQ75|B2HQ75_MYCMM Tax_Id=216594 (dnaE1)SubName: Full=DNA po... 2307 0.0 tr|A0PNY7|A0PNY7_MYCUA Tax_Id=362242 (dnaE1)SubName: Full=DNA po... 2304 0.0 tr|Q740T5|Q740T5_MYCPA Tax_Id=1770 (dnaE1)SubName: Full=DnaE1;[M... 2190 0.0 tr|A0QHL8|A0QHL8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 2187 0.0 sp|P63977|DPO3A_MYCTU Tax_Id=1773 (dnaE1)RecName: Full=DNA polym... 2104 0.0 sp|P63978|DPO3A_MYCBO Tax_Id=1765 (dnaE)RecName: Full=DNA polyme... 2104 0.0 tr|C6DSP5|C6DSP5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras... 2104 0.0 tr|C1ANI3|C1ANI3_MYCBT Tax_Id=561275 (dnaE)SubName: Full=DNA pol... 2104 0.0 tr|A5U2Q4|A5U2Q4_MYCTA Tax_Id=419947 (dnaE1)SubName: Full=DNA po... 2104 0.0 tr|A1KIX8|A1KIX8_MYCBP Tax_Id=410289 (dnaE1)SubName: Full=Probab... 2104 0.0 tr|A5WMN4|A5WMN4_MYCTF Tax_Id=336982 SubName: Full=DNA polymeras... 2104 0.0 tr|A4KH92|A4KH92_MYCTU Tax_Id=395095 SubName: Full=DNA polymeras... 2104 0.0 tr|A2VI63|A2VI63_MYCTU Tax_Id=348776 SubName: Full=DNA polymeras... 2104 0.0 tr|A0QX55|A0QX55_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 2093 0.0 tr|Q1B7E0|Q1B7E0_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 2091 0.0 tr|A3Q159|A3Q159_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 2091 0.0 tr|A1UHN3|A1UHN3_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 2091 0.0 tr|A1T8T4|A1T8T4_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras... 2087 0.0 tr|A4T9K1|A4T9K1_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 2061 0.0 sp|Q9X7F0|DPO3A_MYCLE Tax_Id=1769 (dnaE)RecName: Full=DNA polyme... 2058 0.0 tr|B8ZR78|B8ZR78_MYCLB Tax_Id=561304 (dnaE)SubName: Full=DNA pol... 2058 0.0 tr|B1MC05|B1MC05_MYCA9 Tax_Id=561007 SubName: Full=DNA polymeras... 1997 0.0 tr|Q5YYU5|Q5YYU5_NOCFA Tax_Id=37329 (dnaE)SubName: Full=Putative... 1868 0.0 tr|Q0SHU0|Q0SHU0_RHOSR Tax_Id=101510 (dnaE1)SubName: Full=DNA-di... 1862 0.0 tr|C1AU36|C1AU36_RHOOB Tax_Id=632772 (dnaE)SubName: Full=DNA pol... 1861 0.0 tr|C1A0V4|C1A0V4_RHOE4 Tax_Id=234621 (dnaE)SubName: Full=DNA pol... 1804 0.0 tr|C3JJ26|C3JJ26_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 1803 0.0 tr|C2ATP2|C2ATP2_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras... 1786 0.0 tr|D0LAQ8|D0LAQ8_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 1781 0.0 tr|Q8FNW4|Q8FNW4_COREF Tax_Id=152794 SubName: Full=Putative DNA ... 1591 0.0 tr|C8NPY6|C8NPY6_COREF Tax_Id=196164 (dnaE)SubName: Full=DNA pol... 1591 0.0 tr|A4QFJ4|A4QFJ4_CORGB Tax_Id=340322 SubName: Full=Putative unch... 1564 0.0 tr|Q8NNQ8|Q8NNQ8_CORGL Tax_Id=1718 SubName: Full=DNA polymerase ... 1562 0.0 tr|Q6M3U6|Q6M3U6_CORGL Tax_Id=1718 (dnaE1)SubName: Full=PUTATIVE... 1562 0.0 tr|C7MYX4|C7MYX4_SACVD Tax_Id=471857 SubName: Full=DNA polymeras... 1553 0.0 tr|C8NTP1|C8NTP1_9CORY Tax_Id=585529 (dnaE)SubName: Full=DNA pol... 1547 0.0 tr|Q6NGE6|Q6NGE6_CORDI Tax_Id=1717 (dnaE)SubName: Full=DNA polym... 1546 0.0 tr|C0XS28|C0XS28_9CORY Tax_Id=525263 (dnaE)SubName: Full=DNA pol... 1545 0.0 tr|C3PHD3|C3PHD3_CORA7 Tax_Id=548476 (dnaE1)SubName: Full=DNA po... 1543 0.0 tr|C0E4Q7|C0E4Q7_9CORY Tax_Id=566549 SubName: Full=Putative unch... 1538 0.0 tr|C5VD53|C5VD53_9CORY Tax_Id=553207 SubName: Full=DNA polymeras... 1538 0.0 tr|C2CNK6|C2CNK6_CORST Tax_Id=525268 (dnaE)SubName: Full=DNA pol... 1538 0.0 tr|C0WKC4|C0WKC4_9CORY Tax_Id=525260 (dnaE)SubName: Full=DNA pol... 1536 0.0 tr|C2GKN1|C2GKN1_9CORY Tax_Id=548478 (dnaE)SubName: Full=DNA pol... 1535 0.0 tr|C0VV59|C0VV59_9CORY Tax_Id=548477 (dnaE)SubName: Full=DNA pol... 1535 0.0 tr|C4LI70|C4LI70_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras... 1535 0.0 tr|C6RAU2|C6RAU2_9CORY Tax_Id=553206 SubName: Full=DNA polymeras... 1530 0.0 tr|C2BNL7|C2BNL7_9CORY Tax_Id=525264 (dnaE)SubName: Full=DNA pol... 1530 0.0 tr|Q4JW74|Q4JW74_CORJK Tax_Id=306537 (dnaE)SubName: Full=DNA pol... 1528 0.0 tr|C8RRB2|C8RRB2_CORJE Tax_Id=525262 (dnaE)SubName: Full=DNA pol... 1528 0.0 >tr|B2HQ75|B2HQ75_MYCMM Tax_Id=216594 (dnaE1)SubName: Full=DNA polymerase III, alpha subunit, DnaE1;[Mycobacterium marinum] Length = 1180 Score = 2307 bits (5979), Expect = 0.0 Identities = 1155/1180 (97%), Positives = 1155/1180 (97%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA Sbjct: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL Sbjct: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK Sbjct: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL Sbjct: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 Query: 241 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT 300 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT Sbjct: 241 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT 300 Query: 301 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF 360 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF Sbjct: 301 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF 360 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD 420 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI Sbjct: 421 IDIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG Sbjct: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI Sbjct: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 Query: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA Sbjct: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 Query: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA Sbjct: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 Query: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY Sbjct: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 Query: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP Sbjct: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 Query: 841 DVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACN 900 DVNESLVNFASVGQDIRF SLIGTRSGKGKFTDFSDYLNKIDISACN Sbjct: 841 DVNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACN 900 Query: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF 960 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF Sbjct: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF 960 Query: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV 1020 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV Sbjct: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV 1020 Query: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV Sbjct: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 Query: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL Sbjct: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 Query: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 >tr|A0PNY7|A0PNY7_MYCUA Tax_Id=362242 (dnaE1)SubName: Full=DNA polymerase III, alpha subunit, DnaE1;[Mycobacterium ulcerans] Length = 1180 Score = 2304 bits (5971), Expect = 0.0 Identities = 1153/1180 (97%), Positives = 1154/1180 (97%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA Sbjct: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL Sbjct: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK Sbjct: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL Sbjct: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 Query: 241 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT 300 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT Sbjct: 241 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT 300 Query: 301 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF 360 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF Sbjct: 301 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF 360 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD 420 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI Sbjct: 421 IDIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG Sbjct: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI Sbjct: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 Query: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 ENI+ANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA Sbjct: 601 ENIEANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 Query: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA Sbjct: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 Query: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY Sbjct: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 Query: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP Sbjct: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 Query: 841 DVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACN 900 DVNESLVNFASVGQDIRF SLIGTRSGKGKFTDFSDYLNKIDISACN Sbjct: 841 DVNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACN 900 Query: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF 960 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF Sbjct: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF 960 Query: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV 1020 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDTAIPAILDGDVSNDAQV Sbjct: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDVSNDAQV 1020 Query: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV Sbjct: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 Query: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL Sbjct: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 Query: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 >tr|Q740T5|Q740T5_MYCPA Tax_Id=1770 (dnaE1)SubName: Full=DnaE1;[Mycobacterium paratuberculosis] Length = 1177 Score = 2190 bits (5674), Expect = 0.0 Identities = 1083/1172 (92%), Positives = 1118/1172 (95%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYN+ATKAG+KP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKAGIKP 64 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 SFEGQLGKWSRMDAEL+AEHA+GIIATTGCPSGEVQTRLRLG DREALESAAKWREIFGA Sbjct: 125 SFEGQLGKWSRMDAELIAEHADGIIATTGCPSGEVQTRLRLGQDREALESAAKWREIFGA 184 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIE+RVR+GL+EIGRKL+IPPLATNDCHY+TRDAAHNHEALLCVQTGK Sbjct: 185 DNFFLELMDHGLSIEQRVRDGLLEIGRKLNIPPLATNDCHYITRDAAHNHEALLCVQTGK 244 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDPNRFKFDGDGYYLKSAAEMRQ+WD ++PGACDSTLLIAERVQSYA+VWTPRDRMP+ Sbjct: 245 TLSDPNRFKFDGDGYYLKSAAEMRQIWDAEVPGACDSTLLIAERVQSYAEVWTPRDRMPV 304 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEGHD ASWLHHEVMAGLRRRFP G+GQDYIDRAEYEIKVICDKGFPSYFLIVADLI Sbjct: 305 FPVPEGHDQASWLHHEVMAGLRRRFPDGVGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 364 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 NYARSVDIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 365 NYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDIDFDD 424 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP Sbjct: 425 RRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 484 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI Sbjct: 485 IMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 544 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA++NIKANR Sbjct: 545 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNIKANR 604 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP Sbjct: 605 GIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 664 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKN RQ +KPIHPELEEPLREIL+ETYGLIVYQEQIMFIAQKVASYT Sbjct: 665 GPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILAETYGLIVYQEQIMFIAQKVASYT 724 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA Sbjct: 725 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 784 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV Sbjct: 785 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 844 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 NFASVGQDIRF SLI TR+ KGKFTDFSDYLNKIDISACNKKVTESL Sbjct: 845 NFASVGQDIRFGLGAVRNVGANVVGSLIKTRNEKGKFTDFSDYLNKIDISACNKKVTESL 904 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVFTIKVPED 967 IKAGAFDSL H RKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG ++VFTIKVP+D Sbjct: 905 IKAGAFDSLKHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGDGGCTESVFTIKVPDD 964 Query: 968 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGILA 1027 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDT IPAILDGDV N+ QVRVGGILA Sbjct: 965 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVGGILA 1024 Query: 1028 AVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDDRI 1087 +VNRRVNKNGMPWASAQLEDLTGGIEVMFFPH YS YGADIADDAVVL+NAKVAIRDDRI Sbjct: 1025 SVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIRDDRI 1084 Query: 1088 SLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1147 +LIANELVVPDFS AQ DRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR Sbjct: 1085 ALIANELVVPDFSTAQVDRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1144 Query: 1148 ITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ITTLELD SLRVTPSPALMGDLKELLGPGCLG Sbjct: 1145 ITTLELDASLRVTPSPALMGDLKELLGPGCLG 1176 >tr|A0QHL8|A0QHL8_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Mycobacterium avium] Length = 1177 Score = 2187 bits (5667), Expect = 0.0 Identities = 1084/1172 (92%), Positives = 1116/1172 (95%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYN+ATKAG+KP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKAGIKP 64 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 SFEGQLGKWSRMDAEL+AEHA+GIIATTGCPSGEVQTRLRLG DREALESAAKWREIFGA Sbjct: 125 SFEGQLGKWSRMDAELIAEHADGIIATTGCPSGEVQTRLRLGQDREALESAAKWREIFGA 184 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIE+RVR GL+EIGRKL+IPPLATNDCHYVTRDAAHNHEALLCVQTGK Sbjct: 185 DNFFLELMDHGLSIEQRVRGGLLEIGRKLNIPPLATNDCHYVTRDAAHNHEALLCVQTGK 244 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDPNRFKFDGDGYYLKSAAEMRQ+WD ++PGACDSTLLIAERVQSYA+VWTPRDRMP+ Sbjct: 245 TLSDPNRFKFDGDGYYLKSAAEMRQIWDAEVPGACDSTLLIAERVQSYAEVWTPRDRMPV 304 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEGHD ASWLHHEVMAGLRRRFP G+GQDYIDRAEYEIKVICDKGFPSYFLIVADLI Sbjct: 305 FPVPEGHDQASWLHHEVMAGLRRRFPDGVGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 364 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 NYARSVDIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 365 NYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDIDFDD 424 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP Sbjct: 425 RRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 484 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI Sbjct: 485 IMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 544 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA++NIKANR Sbjct: 545 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNIKANR 604 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP Sbjct: 605 GIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 664 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKN RQ +KPIHPELEEPLREIL+ETYGLIVYQEQIMFIAQKVASYT Sbjct: 665 GPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILAETYGLIVYQEQIMFIAQKVASYT 724 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA Sbjct: 725 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 784 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV Sbjct: 785 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 844 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 NFASVGQDIRF SLI TR KGKFTDFSDYLNKIDISACNKKVTESL Sbjct: 845 NFASVGQDIRFGLGAVRNVGANVVGSLIKTREEKGKFTDFSDYLNKIDISACNKKVTESL 904 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVFTIKVPED 967 IKAGAFDSL H RKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG ++VFTIKVP+D Sbjct: 905 IKAGAFDSLKHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGDGGCTESVFTIKVPDD 964 Query: 968 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGILA 1027 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDT IPAILDGDV N+ QVRVGGILA Sbjct: 965 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVGGILA 1024 Query: 1028 AVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDDRI 1087 +VNRRVNKNGMPWASAQLEDLTGGIEVMFFPH YS YGADIADDAVVL+NAKVAIRDDRI Sbjct: 1025 SVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIRDDRI 1084 Query: 1088 SLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1147 +LIANELVVPDFS AQ DRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR Sbjct: 1085 ALIANELVVPDFSIAQVDRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1144 Query: 1148 ITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ITTLELD SLRVTPSPALMGDLKELLGPGCLG Sbjct: 1145 ITTLELDASLRVTPSPALMGDLKELLGPGCLG 1176 >sp|P63977|DPO3A_MYCTU Tax_Id=1773 (dnaE1)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium tuberculosis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >sp|P63978|DPO3A_MYCBO Tax_Id=1765 (dnaE)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|C6DSP5|C6DSP5_MYCTK Tax_Id=478434 SubName: Full=DNA polymerase subunit III alpha dnaE1;[Mycobacterium tuberculosis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|C1ANI3|C1ANI3_MYCBT Tax_Id=561275 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A5U2Q4|A5U2Q4_MYCTA Tax_Id=419947 (dnaE1)SubName: Full=DNA polymerase III subunit alpha DnaE1;[Mycobacterium tuberculosis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A1KIX8|A1KIX8_MYCBP Tax_Id=410289 (dnaE1)SubName: Full=Probable DNA polymerase III (Alpha chain) dnaE1; EC=2.7.7.7;[Mycobacterium bovis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A5WMN4|A5WMN4_MYCTF Tax_Id=336982 SubName: Full=DNA polymerase III alpha subunit dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A4KH92|A4KH92_MYCTU Tax_Id=395095 SubName: Full=DNA polymerase III (Alpha chain) dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis str. Haarlem] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A2VI63|A2VI63_MYCTU Tax_Id=348776 SubName: Full=DNA polymerase III (Alpha chain) dnaE1 (DNA nucleotidyltransferase);[Mycobacterium tuberculosis C] Length = 1184 Score = 2104 bits (5452), Expect = 0.0 Identities = 1044/1184 (88%), Positives = 1101/1184 (92%), Gaps = 4/1184 (0%) Query: 1 MSGSSS-RSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNS 59 MSGSS+ SFVHLHNHTEYSMLDGAAKITPMLAEVERL MPA+GMTDHGNMFGASEFYNS Sbjct: 1 MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS 60 Query: 60 ATKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRN 119 ATKAG+KPIIGVEAY+APGSRFDTRRI WGDPSQK DDVSGSGSYTHLTM+AENATGLRN Sbjct: 61 ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN 120 Query: 120 LFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAA 179 LFKLSS ASFEGQL KWSRMDAEL+AEHAEGII TTGCPSGEVQTRLRLG DREALE+AA Sbjct: 121 LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA 180 Query: 180 KWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEA 239 KWREI G DNYFLELMDHGL+IERRVR+GL+EIGR L+IPPLATNDCHYVTRDAAHNHEA Sbjct: 181 KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA 240 Query: 240 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVW 299 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQ+WDD++PGACDSTLLIAERVQSYADVW Sbjct: 241 LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW 300 Query: 300 TPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSY 359 TPRDRMP+FPVP+GHD ASWL HEV AGLRRRFP+G Y +RA YEI VIC KGFPSY Sbjct: 301 TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY 360 Query: 360 FLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP 419 FLIVADLI+YARS IRVGPGRGSAAGSLVAYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 361 FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP 420 Query: 420 XXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 479 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR Sbjct: 421 DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR 480 Query: 480 ITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 539 ITKALPP IMAKDIPLSGITDP+HER+KEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA Sbjct: 481 ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA 540 Query: 540 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDA 599 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDA Sbjct: 541 GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA 600 Query: 600 IENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIV 659 I+N++ANRGIDLDLES+PLDDK TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F D+V Sbjct: 601 IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV 660 Query: 660 AVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFI 719 AV+ALYRPGPMGMNAHNDYADRKNNRQA+KPIHPELEEPLREIL+ETYGLIVYQEQIM I Sbjct: 661 AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI 720 Query: 720 AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAG 779 AQKVASY++ +AD LRKAMGKKK EVLE E++GF +GM ANGFS A+KALWDTILPFA Sbjct: 721 AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD 780 Query: 780 YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 839 YAFNKSHAAGYG+VSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP Sbjct: 781 YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP 840 Query: 840 PDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISAC 899 PDVNES +NFASVGQDIR+ SL+ TR+ KGKFTDFSDYLNKIDISAC Sbjct: 841 PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC 900 Query: 900 NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---A 956 NKKVTESLIKAGAFDSLGH RKGLFLVH+DAVDSVLGTKKAEA+GQFDLFG +D G A Sbjct: 901 NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA 960 Query: 957 DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSN 1016 D VFTIKVP+DEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV N Sbjct: 961 DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN 1020 Query: 1017 DAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLV 1076 DAQVRVGGILA+VNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYS+YGADI DDAVVLV Sbjct: 1021 DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV 1080 Query: 1077 NAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 NAKVA+RDDRI+LIAN+L VPDFSNA+ +RPLAVSLPTRQCT DKV+ALKQVLARHPGTS Sbjct: 1081 NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS 1140 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 QVHLRLISGDRITTL LDQSLRVTPSPALMGDLKELLGPGCLGS Sbjct: 1141 QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS 1184 >tr|A0QX55|A0QX55_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Mycobacterium smegmatis] Length = 1184 Score = 2093 bits (5422), Expect = 0.0 Identities = 1037/1179 (87%), Positives = 1096/1179 (92%), Gaps = 2/1179 (0%) Query: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 G SS SFVHLHNHTEYSMLDGAAKITPMLAE +RL+MPAIGMTDHGNMFGASEFYNSATK Sbjct: 6 GRSSGSFVHLHNHTEYSMLDGAAKITPMLAEAQRLEMPAIGMTDHGNMFGASEFYNSATK 65 Query: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 AG+KPIIG+EAY+APGSRFDT+R+TWGDP QKGDDVSGSG+YTH+TMVAENATGLRNLFK Sbjct: 66 AGIKPIIGIEAYIAPGSRFDTKRVTWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFK 125 Query: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 LSSLASFEGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGH+REALE+AAKWR Sbjct: 126 LSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWR 185 Query: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 EIFG +N+FLELMDHGL IERRVREGL+EIGRKL IPPLATNDCHYVTR+AA NHEALLC Sbjct: 186 EIFGPENFFLELMDHGLDIERRVREGLLEIGRKLGIPPLATNDCHYVTREAARNHEALLC 245 Query: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 VQTGKTLSDP RFKFDGDGY+LKSA EMR LWD +PGACDSTLLI ERVQSYADVW PR Sbjct: 246 VQTGKTLSDPTRFKFDGDGYFLKSAEEMRALWDSQVPGACDSTLLIGERVQSYADVWEPR 305 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFL 361 DRMP+FPVPEGHD ASWL HEV AGL RRF G + ++Y RAEYEIKVICDKGFPSYFL Sbjct: 306 DRMPVFPVPEGHDQASWLTHEVKAGLERRFRGGPVPEEYTTRAEYEIKVICDKGFPSYFL 365 Query: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXX 421 IVADLINYARSV IRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 366 IVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDI 425 Query: 422 XXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 GEM+RYAA++WG +RVAQVITFGTIKTKAALKDSAR+++GQPGFAIADRIT Sbjct: 426 DIDFDDRRRGEMLRYAANRWGSERVAQVITFGTIKTKAALKDSARVNFGQPGFAIADRIT 485 Query: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 KALPPPIMAKDIPLSGITDP HER+KEAAEVRGLI+TDPDVRTIY+TARGLEGL+RNAGV Sbjct: 486 KALPPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGV 545 Query: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 HACAVIMSSEPL +AIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI Sbjct: 546 HACAVIMSSEPLIDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIA 605 Query: 602 NIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 NIKANRGIDLDLE+LPLDD YELL RG+TLGVFQLDGGPMRDLLRRMQPT FNDIVAV Sbjct: 606 NIKANRGIDLDLETLPLDDPAAYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV 665 Query: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 LALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ETYGLIVYQEQIMFIAQ Sbjct: 666 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 725 Query: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 KVASYTMGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYA Sbjct: 726 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 785 Query: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPD Sbjct: 786 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPD 845 Query: 842 VNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 VNES NFASVG DIRF SLI TR+ KGKFTDFSDYLNKIDI+ACNK Sbjct: 846 VNESEHNFASVGDDIRFGLGAIRNVGANVVSSLIKTRTEKGKFTDFSDYLNKIDITACNK 905 Query: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF-GGSDSGADAVF 960 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF GG D+G DAVF Sbjct: 906 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGEDTGTDAVF 965 Query: 961 TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV 1020 TIKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV+NDAQV Sbjct: 966 TIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDAQV 1025 Query: 1021 RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +GADIADD VVLV AKV Sbjct: 1026 LVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGADIADDVVVLVKAKV 1085 Query: 1081 AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL 1140 A RDDRI+LIA+EL+VPDFS+AQADRPL+VSLPTRQCTIDKVTALKQVLA HPGTSQVHL Sbjct: 1086 AARDDRIALIAHELIVPDFSSAQADRPLSVSLPTRQCTIDKVTALKQVLANHPGTSQVHL 1145 Query: 1141 RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 RLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1146 RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 >tr|Q1B7E0|Q1B7E0_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2091 bits (5417), Expect = 0.0 Identities = 1033/1185 (87%), Positives = 1097/1185 (92%), Gaps = 8/1185 (0%) Query: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 G SS SFVHLHNHTEYSMLDGAAK+ PMLAE +RL+MPAIGMTDHGNMFGASEFYN+AT Sbjct: 6 GRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATD 65 Query: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 AG+KPIIG+EAY+AP SRF+T+R+ WGDPSQK DDVSGSGSYTH+TMVAENATGLRNLFK Sbjct: 66 AGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLFK 125 Query: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 LSSLASFEGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGH REALE+AAKWR Sbjct: 126 LSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEAAAKWR 185 Query: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 EIFG N+FLELMDHGL IERRVREGL+EIG+KL IPPLATNDCHYVTRDA+ NHEALLC Sbjct: 186 EIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEALLC 245 Query: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 +QTGKTLSDP RFKFDGDGYYLKSAAEMR LWD +PGACDSTLLIAERVQSYADVW PR Sbjct: 246 IQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYADVWAPR 305 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLG----QDYIDRAEYEIKVICDKGFPS 358 DRMPIFPVPEGHD ASWLHHEVMAGL+RRF + G DYI+RAEYEIKVICDKGFPS Sbjct: 306 DRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICDKGFPS 365 Query: 359 YFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSA 418 YFLIVADLINYA+SVDIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSA Sbjct: 366 YFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA 425 Query: 419 PXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD 478 P GEM+RYAA+KWG DRVAQVITFGTIKTKAALKDSAR+HYGQPGFAIAD Sbjct: 426 PDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIAD 485 Query: 479 RITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRN 538 RITKALPPPIMAKDIP+SGITDP HER+KEAAEVR LI+TDPDVRTIY+TARGLEGL+RN Sbjct: 486 RITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRN 545 Query: 539 AGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 598 AGVHACAVIMSSEPL +AIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD Sbjct: 546 AGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 605 Query: 599 AIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDI 658 IENIKANRG+DLDLESL LDD YELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDI Sbjct: 606 CIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDI 665 Query: 659 VAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMF 718 VAVLALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL+EIL+ETYGLIVYQEQIMF Sbjct: 666 VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMF 725 Query: 719 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFA 778 IAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF EGMTANGFSE AVKALWDTILPFA Sbjct: 726 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDTILPFA 785 Query: 779 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVL 838 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVL Sbjct: 786 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL 845 Query: 839 PPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISA 898 PPDVNES+ NFASVG DIRF SL+ TR+ KGK++DFSDYLNKIDI+A Sbjct: 846 PPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNKIDIAA 905 Query: 899 CNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSD-SGAD 957 CNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG D SGAD Sbjct: 906 CNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGDGSGAD 965 Query: 958 A---VFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV 1014 A F+IKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV Sbjct: 966 AGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDV 1025 Query: 1015 SNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVV 1074 +NDAQV VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +GA+IADD VV Sbjct: 1026 ANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIADDVVV 1085 Query: 1075 LVNAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPG 1134 LV AKVA RDDRI+LIA+ELVVPDFS+AQADRPLAVSLPTRQCT+DKVTALKQVLA HPG Sbjct: 1086 LVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVLANHPG 1145 Query: 1135 TSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 TSQVHLRLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1146 TSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A3Q159|A3Q159_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2091 bits (5417), Expect = 0.0 Identities = 1033/1185 (87%), Positives = 1097/1185 (92%), Gaps = 8/1185 (0%) Query: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 G SS SFVHLHNHTEYSMLDGAAK+ PMLAE +RL+MPAIGMTDHGNMFGASEFYN+AT Sbjct: 6 GRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATD 65 Query: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 AG+KPIIG+EAY+AP SRF+T+R+ WGDPSQK DDVSGSGSYTH+TMVAENATGLRNLFK Sbjct: 66 AGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLFK 125 Query: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 LSSLASFEGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGH REALE+AAKWR Sbjct: 126 LSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEAAAKWR 185 Query: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 EIFG N+FLELMDHGL IERRVREGL+EIG+KL IPPLATNDCHYVTRDA+ NHEALLC Sbjct: 186 EIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEALLC 245 Query: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 +QTGKTLSDP RFKFDGDGYYLKSAAEMR LWD +PGACDSTLLIAERVQSYADVW PR Sbjct: 246 IQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYADVWAPR 305 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLG----QDYIDRAEYEIKVICDKGFPS 358 DRMPIFPVPEGHD ASWLHHEVMAGL+RRF + G DYI+RAEYEIKVICDKGFPS Sbjct: 306 DRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICDKGFPS 365 Query: 359 YFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSA 418 YFLIVADLINYA+SVDIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSA Sbjct: 366 YFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA 425 Query: 419 PXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD 478 P GEM+RYAA+KWG DRVAQVITFGTIKTKAALKDSAR+HYGQPGFAIAD Sbjct: 426 PDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIAD 485 Query: 479 RITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRN 538 RITKALPPPIMAKDIP+SGITDP HER+KEAAEVR LI+TDPDVRTIY+TARGLEGL+RN Sbjct: 486 RITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRN 545 Query: 539 AGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 598 AGVHACAVIMSSEPL +AIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD Sbjct: 546 AGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 605 Query: 599 AIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDI 658 IENIKANRG+DLDLESL LDD YELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDI Sbjct: 606 CIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDI 665 Query: 659 VAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMF 718 VAVLALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL+EIL+ETYGLIVYQEQIMF Sbjct: 666 VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMF 725 Query: 719 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFA 778 IAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF EGMTANGFSE AVKALWDTILPFA Sbjct: 726 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDTILPFA 785 Query: 779 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVL 838 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVL Sbjct: 786 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL 845 Query: 839 PPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISA 898 PPDVNES+ NFASVG DIRF SL+ TR+ KGK++DFSDYLNKIDI+A Sbjct: 846 PPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNKIDIAA 905 Query: 899 CNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSD-SGAD 957 CNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG D SGAD Sbjct: 906 CNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGDGSGAD 965 Query: 958 A---VFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV 1014 A F+IKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV Sbjct: 966 AGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDV 1025 Query: 1015 SNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVV 1074 +NDAQV VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +GA+IADD VV Sbjct: 1026 ANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIADDVVV 1085 Query: 1075 LVNAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPG 1134 LV AKVA RDDRI+LIA+ELVVPDFS+AQADRPLAVSLPTRQCT+DKVTALKQVLA HPG Sbjct: 1086 LVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVLANHPG 1145 Query: 1135 TSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 TSQVHLRLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1146 TSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A1UHN3|A1UHN3_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 1191 Score = 2091 bits (5417), Expect = 0.0 Identities = 1033/1185 (87%), Positives = 1097/1185 (92%), Gaps = 8/1185 (0%) Query: 3 GSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATK 62 G SS SFVHLHNHTEYSMLDGAAK+ PMLAE +RL+MPAIGMTDHGNMFGASEFYN+AT Sbjct: 6 GRSSGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATD 65 Query: 63 AGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFK 122 AG+KPIIG+EAY+AP SRF+T+R+ WGDPSQK DDVSGSGSYTH+TMVAENATGLRNLFK Sbjct: 66 AGIKPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLFK 125 Query: 123 LSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWR 182 LSSLASFEGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGH REALE+AAKWR Sbjct: 126 LSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHQREALEAAAKWR 185 Query: 183 EIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLC 242 EIFG N+FLELMDHGL IERRVREGL+EIG+KL IPPLATNDCHYVTRDA+ NHEALLC Sbjct: 186 EIFGPQNFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEALLC 245 Query: 243 VQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR 302 +QTGKTLSDP RFKFDGDGYYLKSAAEMR LWD +PGACDSTLLIAERVQSYADVW PR Sbjct: 246 IQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDSQVPGACDSTLLIAERVQSYADVWAPR 305 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLG----QDYIDRAEYEIKVICDKGFPS 358 DRMPIFPVPEGHD ASWLHHEVMAGL+RRF + G DYI+RAEYEIKVICDKGFPS Sbjct: 306 DRMPIFPVPEGHDQASWLHHEVMAGLKRRFSAVSGGVVPNDYIERAEYEIKVICDKGFPS 365 Query: 359 YFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSA 418 YFLIVADLINYA+SVDIRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSA Sbjct: 366 YFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA 425 Query: 419 PXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD 478 P GEM+RYAA+KWG DRVAQVITFGTIKTKAALKDSAR+HYGQPGFAIAD Sbjct: 426 PDIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIAD 485 Query: 479 RITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRN 538 RITKALPPPIMAKDIP+SGITDP HER+KEAAEVR LI+TDPDVRTIY+TARGLEGL+RN Sbjct: 486 RITKALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRN 545 Query: 539 AGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 598 AGVHACAVIMSSEPL +AIPLW+RPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD Sbjct: 546 AGVHACAVIMSSEPLIDAIPLWRRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 605 Query: 599 AIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDI 658 IENIKANRG+DLDLESL LDD YELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDI Sbjct: 606 CIENIKANRGVDLDLESLALDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDI 665 Query: 659 VAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMF 718 VAVLALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL+EIL+ETYGLIVYQEQIMF Sbjct: 666 VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMF 725 Query: 719 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFA 778 IAQKVASYTMGKADALRKAMGKKKLEVLEAEY+GF EGMTANGFSE AVKALWDTILPFA Sbjct: 726 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYQGFREGMTANGFSEAAVKALWDTILPFA 785 Query: 779 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVL 838 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVL Sbjct: 786 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL 845 Query: 839 PPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISA 898 PPDVNES+ NFASVG DIRF SL+ TR+ KGK++DFSDYLNKIDI+A Sbjct: 846 PPDVNESVQNFASVGDDIRFGLGAVRNVGANVVASLVNTRAEKGKYSDFSDYLNKIDIAA 905 Query: 899 CNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSD-SGAD 957 CNKKVTESLIKAGAFDSLGHPRKGLFL+HTDAVDSVLGTKKAEAMGQFDLFG D SGAD Sbjct: 906 CNKKVTESLIKAGAFDSLGHPRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGSGDGSGAD 965 Query: 958 A---VFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV 1014 A F+IKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLA QVDT IPAILDGDV Sbjct: 966 AGDSAFSIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDV 1025 Query: 1015 SNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVV 1074 +NDAQV VGGILA+VNRRVNKNG+PWASAQLEDLTGGIEV+FFP TYS +GA+IADD VV Sbjct: 1026 ANDAQVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSVFGAEIADDVVV 1085 Query: 1075 LVNAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPG 1134 LV AKVA RDDRI+LIA+ELVVPDFS+AQADRPLAVSLPTRQCT+DKVTALKQVLA HPG Sbjct: 1086 LVKAKVAARDDRIALIAHELVVPDFSSAQADRPLAVSLPTRQCTVDKVTALKQVLANHPG 1145 Query: 1135 TSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 TSQVHLRLISG+RITTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1146 TSQVHLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG 1190 >tr|A1T8T4|A1T8T4_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium vanbaalenii] Length = 1182 Score = 2087 bits (5407), Expect = 0.0 Identities = 1029/1180 (87%), Positives = 1097/1180 (92%), Gaps = 6/1180 (0%) Query: 6 SRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGV 65 S SFVHLHNHTEYSMLDGAAK+ PMLAE +RL+MPAIGMTDHGNMFGASEFYN+AT AG+ Sbjct: 2 SGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATDAGI 61 Query: 66 KPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSS 125 KPIIG+EAY+AP SRF+T+R+ WGDPSQK DDVSG GSYTH+TMVAENATGLRNLFKLSS Sbjct: 62 KPIIGIEAYIAPASRFETKRVLWGDPSQKSDDVSGGGSYTHMTMVAENATGLRNLFKLSS 121 Query: 126 LASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIF 185 LASFEGQLGKW+RMDAE++AEHAEGIIATTGCPSGEVQTRLRLGHDREALE+AA+WREIF Sbjct: 122 LASFEGQLGKWARMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAARWREIF 181 Query: 186 GADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQT 245 G +N+FLELMDHGL IERRVREGL++IG+KL IPPLATNDCHYVTRDAA NHEALLC+QT Sbjct: 182 GPENFFLELMDHGLDIERRVREGLLDIGQKLGIPPLATNDCHYVTRDAAQNHEALLCIQT 241 Query: 246 GKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRM 305 GKTLSDPNRFKFDGDGY+LKSAAEMR LWD +PGACDSTLLIAERVQSYADVWTP+DRM Sbjct: 242 GKTLSDPNRFKFDGDGYFLKSAAEMRALWDGQVPGACDSTLLIAERVQSYADVWTPKDRM 301 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG--LGQDYIDRAEYEIKVICDKGFPSYFLIV 363 PIFPVPEGHD SWL HEVM GL+ R G + Q+YIDRA+YEIKVICDKGFP+YFLIV Sbjct: 302 PIFPVPEGHDQGSWLTHEVMTGLQERRFHGAPVPQEYIDRAQYEIKVICDKGFPAYFLIV 361 Query: 364 ADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXX 423 ADLINYARSV IRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 ADLINYARSVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDIDI 421 Query: 424 XXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA 483 GEM+RYAA+KWG DRVAQVITFGTIKTKAALKDSAR+HYGQPGFAIADRITKA Sbjct: 422 DFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRITKA 481 Query: 484 LPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA 543 LPPPIMAKDIP+SGITDP HER+KEAAEVR LI+TDPDVRTIY+TARGLEGL+RNAGVHA Sbjct: 482 LPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGVHA 541 Query: 544 CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENI 603 CAVIMSSEPL +AIPLWKRPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD IENI Sbjct: 542 CAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENI 601 Query: 604 KANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 KANRGID+DLESL LDD YELLGRG+TLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA Sbjct: 602 KANRGIDVDLESLTLDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 661 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMGMNAHNDYADRKN RQA+KPIHPELEEPL++ILSETYGLIVYQEQIMFIAQKV Sbjct: 662 LYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKDILSETYGLIVYQEQIMFIAQKV 721 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 ASY+MGKADALRKAMGKKKLEVLEAEY+GF EGMTANGFSEKAVKALWDTILPFAGYAFN Sbjct: 722 ASYSMGKADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAGYAFN 781 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPPDVN Sbjct: 782 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVN 841 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES+ NFASVG DIRF SL+ TR KGKF DFSDYLNKIDI+ACNKKV Sbjct: 842 ESVQNFASVGDDIRFGLGAVRNVGANVVSSLVATRKEKGKFADFSDYLNKIDIAACNKKV 901 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSD-SGADA---V 959 TESL+KAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG+D SGADA Sbjct: 902 TESLVKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGADGSGADAGDSA 961 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 FTIKVP++EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDT IPAILDGDV+ND Q Sbjct: 962 FTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVANDTQ 1021 Query: 1020 VRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAK 1079 VRVGGILA+VNRRVNKNG+PWASAQ+EDLTGGIEV+FFP TYS +GA+IADD VVLV AK Sbjct: 1022 VRVGGILASVNRRVNKNGLPWASAQIEDLTGGIEVLFFPQTYSMFGAEIADDVVVLVGAK 1081 Query: 1080 VAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVH 1139 VAIRDDRISLIANELVVPDFS+A +RP+AVSLPTRQCT+DKVTALKQVLARHPGT+QVH Sbjct: 1082 VAIRDDRISLIANELVVPDFSSANVNRPVAVSLPTRQCTVDKVTALKQVLARHPGTAQVH 1141 Query: 1140 LRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 LRLISG+RITTLELDQSLRVTPS ALMGDLKELLGPGCLG Sbjct: 1142 LRLISGERITTLELDQSLRVTPSSALMGDLKELLGPGCLG 1181 >tr|A4T9K1|A4T9K1_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 1183 Score = 2061 bits (5339), Expect = 0.0 Identities = 1010/1181 (85%), Positives = 1084/1181 (91%), Gaps = 7/1181 (0%) Query: 6 SRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGV 65 S SFVHLHNHTEYSMLDGAAK+ PMLAE +RL+MPAIGMTDHGNMFGASEFYN+AT AG+ Sbjct: 2 SGSFVHLHNHTEYSMLDGAAKVKPMLAEAQRLEMPAIGMTDHGNMFGASEFYNAATDAGI 61 Query: 66 KPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSS 125 KPIIG+EAY+AP SRFDT+R+ WGDP QK DDVSGSGSYTH+TMVAENATGLRNLFKLSS Sbjct: 62 KPIIGIEAYIAPASRFDTKRVLWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLSS 121 Query: 126 LASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIF 185 LASFEGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGHDREALE+AA+WREIF Sbjct: 122 LASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALEAAARWREIF 181 Query: 186 GADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQT 245 G +N+FLELMDHGL IERRVREGL+EIG+KL IPPLATNDCHYVTRDA+ NHEALLC+QT Sbjct: 182 GPENFFLELMDHGLDIERRVREGLLEIGQKLGIPPLATNDCHYVTRDASQNHEALLCIQT 241 Query: 246 GKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRM 305 GKTLSDPNRFKFDGDGYYLKSAAEMR LWD +PGACDSTLLIAERVQ Y DVW P+DRM Sbjct: 242 GKTLSDPNRFKFDGDGYYLKSAAEMRALWDGQVPGACDSTLLIAERVQPYTDVWAPKDRM 301 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSGLG----QDYIDRAEYEIKVICDKGFPSYFL 361 P+FPVPEGHD SWL HEVMAGL RRF + G +YI+RA+YEIKVICDKGFP+YFL Sbjct: 302 PVFPVPEGHDQGSWLTHEVMAGLERRFSAAAGGQVPPEYIERADYEIKVICDKGFPAYFL 361 Query: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXX 421 IVADLINYA+SV IRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAP Sbjct: 362 IVADLINYAKSVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDI 421 Query: 422 XXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 GEM+RYAA+KWG DRVAQVITFGTIKTKAALKDSAR+HYGQPGFAIADRIT Sbjct: 422 DIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRIT 481 Query: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 KALPPPIMAKDIP+SGITDP HER+KEAAEVR LI+TDPDVRTIY+TARGLEGL+RNAGV Sbjct: 482 KALPPPIMAKDIPVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGV 541 Query: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 HACAVIMSSEPL +AIPLWKRPQDGA+ITGWDYPSCEAIGLLKMDFLGLRNLTIIGD IE Sbjct: 542 HACAVIMSSEPLIDAIPLWKRPQDGAVITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIE 601 Query: 602 NIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 NIKANRG+D+DLESL LDD YELLGRG+TLGVFQLDG MRDLLRRMQPTEFNDIVAV Sbjct: 602 NIKANRGVDVDLESLALDDPKAYELLGRGDTLGVFQLDGSAMRDLLRRMQPTEFNDIVAV 661 Query: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 LALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ETYGLIVYQEQIMFIAQ Sbjct: 662 LALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETYGLIVYQEQIMFIAQ 721 Query: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 KVASY+MGKADALRKAMGKKKLEVLEAEYKGF EGMTANGFSE AVKALWDTILPFAGYA Sbjct: 722 KVASYSMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAGYA 781 Query: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 FNKSHAAGYGLVSYWTAYLKANY AEYMAGLLTSVGDDKDKAA+YLADCR+LGITVLPPD Sbjct: 782 FNKSHAAGYGLVSYWTAYLKANYQAEYMAGLLTSVGDDKDKAAIYLADCRRLGITVLPPD 841 Query: 842 VNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 VNES+ NFASVG DIRF SL+ TR KGK+TDFSDYLNKIDI+AC K Sbjct: 842 VNESVQNFASVGDDIRFGLGAVRNVGANVVASLVSTREEKGKYTDFSDYLNKIDITACTK 901 Query: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---ADA 958 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG D D+ Sbjct: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGDDDGDTGDS 961 Query: 959 VFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDA 1018 FTIKVP++EWEDKHKLALEREMLGLYVSGHPLNG+AHLL AQVDT IPAIL+G + NDA Sbjct: 962 AFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGIAHLLTAQVDTQIPAILEGAIPNDA 1021 Query: 1019 QVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNA 1078 QVRVGGILA+VNRRVNKNG+PWASAQ+EDL+GGIEV+FFP TYS +GA+IADD VVLV A Sbjct: 1022 QVRVGGILASVNRRVNKNGLPWASAQIEDLSGGIEVLFFPQTYSMFGAEIADDVVVLVGA 1081 Query: 1079 KVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQV 1138 KVA RDDRISLIANEL+VPDF++AQ +RP+AVSLPTRQCT+DKVTALKQVLARHPGT+QV Sbjct: 1082 KVAKRDDRISLIANELIVPDFTSAQVNRPVAVSLPTRQCTVDKVTALKQVLARHPGTAQV 1141 Query: 1139 HLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 HLRLISG+RITTLELDQSLRVTPS ALMGDLKELLGPGCLG Sbjct: 1142 HLRLISGERITTLELDQSLRVTPSSALMGDLKELLGPGCLG 1182 >sp|Q9X7F0|DPO3A_MYCLE Tax_Id=1769 (dnaE)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Mycobacterium leprae] Length = 1177 Score = 2058 bits (5332), Expect = 0.0 Identities = 1017/1172 (86%), Positives = 1071/1172 (91%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAKITPM AEVERL MPA+GMTDHGNMFGASEFYN+A KAG+KP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMFAEVERLQMPAVGMTDHGNMFGASEFYNTAIKAGIKP 64 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIGVEAY+APGSRFDTRRITWGDPSQK DDVS G+YTHLTMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRITWGDPSQKADDVSAGGAYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 SFEGQL KWSRMDAEL+ E+AEGII TTGCPSGEVQTRLRLGHDREALESAAKWREI G Sbjct: 125 SFEGQLSKWSRMDAELIGEYAEGIIVTTGCPSGEVQTRLRLGHDREALESAAKWREIVGP 184 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGLSIE+RVREGL+ IGRKL+IPPLATNDCHYVTRDA HNHEALLCVQTGK Sbjct: 185 DNYFLELMDHGLSIEQRVREGLLNIGRKLNIPPLATNDCHYVTRDAVHNHEALLCVQTGK 244 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDPNRFKF GDGYYLKSAAEMRQLWDD++PGACDSTLLIAERVQSYADVW PR+RMP+ Sbjct: 245 TLSDPNRFKFHGDGYYLKSAAEMRQLWDDEVPGACDSTLLIAERVQSYADVWEPRNRMPV 304 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVP GHD ASWL HEV AGL+RRFP G Y++RA YEI VICDKGFP+YFLIVADL+ Sbjct: 305 FPVPVGHDQASWLRHEVDAGLKRRFPDGPPNGYVERAAYEIDVICDKGFPAYFLIVADLV 364 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+ARSV IRVGPGRGSAAGSL AYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 365 NHARSVGIRVGPGRGSAAGSLAAYALGITDIDPIPHGLLFERFLNPERTSMPDIDIDFDD 424 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFA+ADRITKALPP Sbjct: 425 RRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAMADRITKALPPA 484 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDIPLSGITDPAHERFKEAAEVR LIETD DVR IYQTARGLEGLIRNAGVHACAVI Sbjct: 485 IMAKDIPLSGITDPAHERFKEAAEVRSLIETDSDVRIIYQTARGLEGLIRNAGVHACAVI 544 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 +SSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDAIENIK NR Sbjct: 545 LSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDAIENIKTNR 604 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDLES+PLDD+ TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F DIVAVLALYRP Sbjct: 605 GIDLDLESVPLDDQATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLALYRP 664 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKNNRQ +KPIHPELEEPLREIL+ETYGLIVYQEQIM IAQKVA Y+ Sbjct: 665 GPMGMNAHNDYADRKNNRQVIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKVAGYS 724 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 + +AD LRKAMGKKK EVLE E++GF EGM ANGFS A+KALWD ILPFA YAFNKSHA Sbjct: 725 LARADILRKAMGKKKREVLEKEFEGFSEGMQANGFSVHAIKALWDIILPFADYAFNKSHA 784 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGL+SYWTAYLKAN+ EYMAGLLTSVGDDKDKAAVYLADCRK GITVLPPDVNES++ Sbjct: 785 AGYGLISYWTAYLKANFAGEYMAGLLTSVGDDKDKAAVYLADCRKFGITVLPPDVNESVL 844 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 +FASVG DIR+ SLI TR+ KGKF DFSDYLNKIDI++CNKKVTESL Sbjct: 845 DFASVGADIRYGLGAVRNVGANVVGSLIKTRNAKGKFADFSDYLNKIDITSCNKKVTESL 904 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVFTIKVPED 967 IKAGAFDSLGH RKGLFLVH DAVDSVLGTKKAEA+GQFDLFGG+D G DAVFTIKVP+D Sbjct: 905 IKAGAFDSLGHSRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGTDGGTDAVFTIKVPDD 964 Query: 968 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGILA 1027 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIP ILDG VSND QVRVGGILA Sbjct: 965 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPTILDGGVSNDTQVRVGGILA 1024 Query: 1028 AVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDDRI 1087 AVNRRVNKNG+PWASAQL+DLTGGIEVMFFPHTYS+YGADI DDAVVLVNAKV +RDDRI Sbjct: 1025 AVNRRVNKNGIPWASAQLDDLTGGIEVMFFPHTYSSYGADIIDDAVVLVNAKVVVRDDRI 1084 Query: 1088 SLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1147 +LIAN+LVVPDFSN Q DRPLAVSL TRQCT DKV ALKQVLARHPGTSQVHLRLISGDR Sbjct: 1085 ALIANQLVVPDFSNVQEDRPLAVSLLTRQCTFDKVNALKQVLARHPGTSQVHLRLISGDR 1144 Query: 1148 ITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ITTLELDQSLRVT SPALMGDLK LLGPGCLG Sbjct: 1145 ITTLELDQSLRVTSSPALMGDLKALLGPGCLG 1176 >tr|B8ZR78|B8ZR78_MYCLB Tax_Id=561304 (dnaE)SubName: Full=DNA polymerase III, [alpha] subunit;[Mycobacterium leprae] Length = 1177 Score = 2058 bits (5332), Expect = 0.0 Identities = 1017/1172 (86%), Positives = 1071/1172 (91%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAKITPM AEVERL MPA+GMTDHGNMFGASEFYN+A KAG+KP Sbjct: 5 SFVHLHNHTEYSMLDGAAKITPMFAEVERLQMPAVGMTDHGNMFGASEFYNTAIKAGIKP 64 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIGVEAY+APGSRFDTRRITWGDPSQK DDVS G+YTHLTMVAENA GLRNLFKLSSLA Sbjct: 65 IIGVEAYIAPGSRFDTRRITWGDPSQKADDVSAGGAYTHLTMVAENAAGLRNLFKLSSLA 124 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 SFEGQL KWSRMDAEL+ E+AEGII TTGCPSGEVQTRLRLGHDREALESAAKWREI G Sbjct: 125 SFEGQLSKWSRMDAELIGEYAEGIIVTTGCPSGEVQTRLRLGHDREALESAAKWREIVGP 184 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGLSIE+RVREGL+ IGRKL+IPPLATNDCHYVTRDA HNHEALLCVQTGK Sbjct: 185 DNYFLELMDHGLSIEQRVREGLLNIGRKLNIPPLATNDCHYVTRDAVHNHEALLCVQTGK 244 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDPNRFKF GDGYYLKSAAEMRQLWDD++PGACDSTLLIAERVQSYADVW PR+RMP+ Sbjct: 245 TLSDPNRFKFHGDGYYLKSAAEMRQLWDDEVPGACDSTLLIAERVQSYADVWEPRNRMPV 304 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVP GHD ASWL HEV AGL+RRFP G Y++RA YEI VICDKGFP+YFLIVADL+ Sbjct: 305 FPVPVGHDQASWLRHEVDAGLKRRFPDGPPNGYVERAAYEIDVICDKGFPAYFLIVADLV 364 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+ARSV IRVGPGRGSAAGSL AYA+GIT+IDPIPHGLLFERFLNPER S P Sbjct: 365 NHARSVGIRVGPGRGSAAGSLAAYALGITDIDPIPHGLLFERFLNPERTSMPDIDIDFDD 424 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYAADKWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFA+ADRITKALPP Sbjct: 425 RRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAMADRITKALPPA 484 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDIPLSGITDPAHERFKEAAEVR LIETD DVR IYQTARGLEGLIRNAGVHACAVI Sbjct: 485 IMAKDIPLSGITDPAHERFKEAAEVRSLIETDSDVRIIYQTARGLEGLIRNAGVHACAVI 544 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 +SSEPLTEAIPLWKRPQDGAIITGWDYP+CEAIGLLKMDFLGLRNLTIIGDAIENIK NR Sbjct: 545 LSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDAIENIKTNR 604 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDLES+PLDD+ TYELLGRG+TLGVFQLDGGPMRDLLRRMQPT F DIVAVLALYRP Sbjct: 605 GIDLDLESVPLDDQATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLALYRP 664 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKNNRQ +KPIHPELEEPLREIL+ETYGLIVYQEQIM IAQKVA Y+ Sbjct: 665 GPMGMNAHNDYADRKNNRQVIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKVAGYS 724 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 + +AD LRKAMGKKK EVLE E++GF EGM ANGFS A+KALWD ILPFA YAFNKSHA Sbjct: 725 LARADILRKAMGKKKREVLEKEFEGFSEGMQANGFSVHAIKALWDIILPFADYAFNKSHA 784 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGL+SYWTAYLKAN+ EYMAGLLTSVGDDKDKAAVYLADCRK GITVLPPDVNES++ Sbjct: 785 AGYGLISYWTAYLKANFAGEYMAGLLTSVGDDKDKAAVYLADCRKFGITVLPPDVNESVL 844 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 +FASVG DIR+ SLI TR+ KGKF DFSDYLNKIDI++CNKKVTESL Sbjct: 845 DFASVGADIRYGLGAVRNVGANVVGSLIKTRNAKGKFADFSDYLNKIDITSCNKKVTESL 904 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVFTIKVPED 967 IKAGAFDSLGH RKGLFLVH DAVDSVLGTKKAEA+GQFDLFGG+D G DAVFTIKVP+D Sbjct: 905 IKAGAFDSLGHSRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGTDGGTDAVFTIKVPDD 964 Query: 968 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGILA 1027 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIP ILDG VSND QVRVGGILA Sbjct: 965 EWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPTILDGGVSNDTQVRVGGILA 1024 Query: 1028 AVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDDRI 1087 AVNRRVNKNG+PWASAQL+DLTGGIEVMFFPHTYS+YGADI DDAVVLVNAKV +RDDRI Sbjct: 1025 AVNRRVNKNGIPWASAQLDDLTGGIEVMFFPHTYSSYGADIIDDAVVLVNAKVVVRDDRI 1084 Query: 1088 SLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISGDR 1147 +LIAN+LVVPDFSN Q DRPLAVSL TRQCT DKV ALKQVLARHPGTSQVHLRLISGDR Sbjct: 1085 ALIANQLVVPDFSNVQEDRPLAVSLLTRQCTFDKVNALKQVLARHPGTSQVHLRLISGDR 1144 Query: 1148 ITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ITTLELDQSLRVT SPALMGDLK LLGPGCLG Sbjct: 1145 ITTLELDQSLRVTSSPALMGDLKALLGPGCLG 1176 >tr|B1MC05|B1MC05_MYCA9 Tax_Id=561007 SubName: Full=DNA polymerase III alpha subunit;[Mycobacterium abscessus] Length = 1185 Score = 1997 bits (5173), Expect = 0.0 Identities = 986/1182 (83%), Positives = 1063/1182 (89%), Gaps = 6/1182 (0%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 SS+ SFVHLHNHTEYSMLDGAAKI PMLAEVERL M A+GMTDHGNM+GASEFYN A Sbjct: 3 SSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMSAVGMTDHGNMYGASEFYNVAAAT 62 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRFDT+R+ WGDP QK DDVSGSGSYTH+TMVAENATGLRNLFKL Sbjct: 63 GVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKL 122 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLASFEGQLGKW+RMDA+L+AEHA GIIATTGCPSGEVQTRLRLG + EAL +AAKW++ Sbjct: 123 SSLASFEGQLGKWARMDADLIAEHASGIIATTGCPSGEVQTRLRLGQESEALAAAAKWQD 182 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 IFG DN+FLELMDHGLSIERRVREGL+E+G+KL IPPLATNDCHYVT+D AHNHEALLCV Sbjct: 183 IFGKDNFFLELMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVTKDHAHNHEALLCV 242 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRD 303 QTGKTLSDP RFKFDGDGYYLK A+EMR LWDD +PGACD+TLLIAERVQSY DVW +D Sbjct: 243 QTGKTLSDPTRFKFDGDGYYLKPASEMRDLWDDAVPGACDNTLLIAERVQSYEDVWNFKD 302 Query: 304 RMPIFPVPEGHDPASWLHHEVMAGLRRRF---PSGLGQDYIDRAEYEIKVICDKGFPSYF 360 RMPIFPVPEG D SWL EV GL RRF P G+ +Y RA YE+ VI KGFP+YF Sbjct: 303 RMPIFPVPEGEDQDSWLRKEVDRGLERRFEGVPGGVPDEYFTRAHYELDVIKQKGFPAYF 362 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 L+V DL+++A+ V IRVGPGRGSAAGSLVAYA+GITNIDPIPHGLLFERFLNPERPSAP Sbjct: 363 LVVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPD 422 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEMVRYA +KWG DRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI Sbjct: 423 IDIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 482 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 TKALPPPIMAKDIP+ GIT+P HER+KEAAEVR LI+TDPDVR IYQTA GLEGLIRNAG Sbjct: 483 TKALPPPIMAKDIPVWGITNPEHERYKEAAEVRTLIDTDPDVRNIYQTALGLEGLIRNAG 542 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIMSSEPLT+AIPLWKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA+ Sbjct: 543 VHACAVIMSSEPLTDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAL 602 Query: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 +NIKANRGIDLDL+ LPLDD TYELL RG+TLGVFQLDGGPMRDLLRRMQPT FNDIVA Sbjct: 603 DNIKANRGIDLDLDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVA 662 Query: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 VLALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ET+GLIVYQEQIMFIA Sbjct: 663 VLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETFGLIVYQEQIMFIA 722 Query: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 QKVASY+MGKADALRKAMGKKKLEVLEAEYKGFYEGMT NGFSEKAVKALWDTILPFAGY Sbjct: 723 QKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFAGY 782 Query: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 AFNKSHAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR+LGITVLPP Sbjct: 783 AFNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPP 842 Query: 841 DVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACN 900 DVNES+ NFASVG+DIR+ SLI TR KG FTDFSDYL+KIDI+ACN Sbjct: 843 DVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATREEKGAFTDFSDYLHKIDIAACN 902 Query: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSG---AD 957 KKVTESL+KAGAFDSLGHPRKGLFLV +DAVDSVLGTKKAEAMGQFDLFGG A Sbjct: 903 KKVTESLVKAGAFDSLGHPRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGGGEDSVPAS 962 Query: 958 AVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSND 1017 +F IKVP+DEWE+KHKLALEREMLGLYVSGHPLNGVAHLL+ Q DT IPAILDG+V+ND Sbjct: 963 DIFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLSRQTDTQIPAILDGEVAND 1022 Query: 1018 AQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVN 1077 A V+VGGILA+VNRRVNKNGMPWASAQLEDLTGGIEV+FFP YS YGADIADDAVVLVN Sbjct: 1023 AVVKVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGADIADDAVVLVN 1082 Query: 1078 AKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQ 1137 AKVAIRDDR+SLIAN+LVVPDFS A DRP+AV++PTRQCTIDKVTALKQVL RHPGT+Q Sbjct: 1083 AKVAIRDDRVSLIANDLVVPDFSQAADDRPVAVTMPTRQCTIDKVTALKQVLTRHPGTNQ 1142 Query: 1138 VHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 VHLRLISG+R+TTLELDQSLRVTPS ALMGDLK LLGPGCLG Sbjct: 1143 VHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLG 1184 >tr|Q5YYU5|Q5YYU5_NOCFA Tax_Id=37329 (dnaE)SubName: Full=Putative DNA polymerase III alpha subunit;[Nocardia farcinica] Length = 1196 Score = 1868 bits (4840), Expect = 0.0 Identities = 914/1180 (77%), Positives = 1022/1180 (86%), Gaps = 3/1180 (0%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 +SS SFVHLHNHTEYSMLDGAAKI+P+ E +RL M A+GMTDHGNM+GASEFYNSA K Sbjct: 17 ASSGSFVHLHNHTEYSMLDGAAKISPLFTEAKRLGMTAVGMTDHGNMYGASEFYNSAKKH 76 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 G+KPIIG+EAY+APGSRFDT+R+ WGDP QKGDDVSGSG+YTH+TMVAENATGLRNLFKL Sbjct: 77 GLKPIIGIEAYIAPGSRFDTKRVQWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFKL 136 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS EGQLGKW+RMDAE++A+HAEGIIATTGCPSGEVQTRLRLGH+REALE+AAKW+E Sbjct: 137 SSLASIEGQLGKWARMDAEIIAQHAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQE 196 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 IFG DN+FLE+MDHGLSIERRVREGL++IGRKL IPPLATNDCHYV A NHEALLCV Sbjct: 197 IFGPDNFFLEVMDHGLSIERRVREGLLDIGRKLGIPPLATNDCHYVYESDAANHEALLCV 256 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRD 303 QTGKTLSDP RFKFDG GYYLKS EMR +WD ++PGACD+TLLI ERVQSY VW RD Sbjct: 257 QTGKTLSDPTRFKFDGSGYYLKSGDEMRAIWDAEVPGACDNTLLIGERVQSYDAVWEHRD 316 Query: 304 RMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIV 363 RMPIFPVPEG ASWLH EVM GL RRFP+G+ ++Y+ RAEYE+ VIC+ GFP+YFL+V Sbjct: 317 RMPIFPVPEGETQASWLHKEVMRGLERRFPNGVPEEYLRRAEYELDVICEMGFPAYFLVV 376 Query: 364 ADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXX 423 DLIN+AR V IRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPER S P Sbjct: 377 GDLINHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDI 436 Query: 424 XXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA 483 GEMVRYA +KWG DRVAQVITFGTIKTKAA+KDSAR+ +GQPGFAIAD+I+KA Sbjct: 437 DFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQISKA 496 Query: 484 LPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA 543 LPPPIMAKDIPLSGI DP HER+KEAAEVR LI +PDV IY+TARGLEGLIRNAGVHA Sbjct: 497 LPPPIMAKDIPLSGIMDPEHERYKEAAEVRELIANNPDVAKIYETARGLEGLIRNAGVHA 556 Query: 544 CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENI 603 CAVIMSSEPL +AIPLWKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA++NI Sbjct: 557 CAVIMSSEPLMDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALDNI 616 Query: 604 KANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 KANRGIDLD+++LPLDD TYELL RG+TLGVFQLDG MRDLLRRMQPT F DIVAVLA Sbjct: 617 KANRGIDLDMDNLPLDDPATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLA 676 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMGMNAHNDYADRKN RQ VKPIHPELEEPL++IL++TYGLIVYQEQIM IAQKV Sbjct: 677 LYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKDILADTYGLIVYQEQIMQIAQKV 736 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A Y++G+AD LR+AMGKKK EVLEAE++GF GM NGFS+ A+KALWDTILPFAGYAFN Sbjct: 737 AGYSLGRADILRRAMGKKKAEVLEAEFEGFEAGMLENGFSKPAIKALWDTILPFAGYAFN 796 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAAVYL+DCR+LGITVLPPDVN Sbjct: 797 KSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLSDCRRLGITVLPPDVN 856 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES NFASVG+DIRF S+I R K KFTDFSDYLNKID AC KKV Sbjct: 857 ESEQNFASVGKDIRFGLGAVRNVGANVVASIIQARKEKSKFTDFSDYLNKIDAIACTKKV 916 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--SDSGADAVFT 961 TESLIKAGAFDSLGHPRKGL L+H+DA+D+V+ TKKAEA+GQFDLFGG +D +VF Sbjct: 917 TESLIKAGAFDSLGHPRKGLMLIHSDAIDAVMATKKAEAIGQFDLFGGMDADESVTSVFN 976 Query: 962 IKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVR 1021 +KVP++EWE KHKLALEREMLGLYVSGHPLNGV H+LAAQ DT IPAIL+GDV + AQV Sbjct: 977 VKVPDEEWETKHKLALEREMLGLYVSGHPLNGVEHVLAAQADTQIPAILEGDVKDGAQVT 1036 Query: 1022 VGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVA 1081 +GGILA+VNRR+NKNG+ WASAQLEDLTGGIEV+FFP YS YGAD+ +DAVVLV A+V+ Sbjct: 1037 IGGILASVNRRINKNGLAWASAQLEDLTGGIEVLFFPQAYSVYGADVVEDAVVLVKARVS 1096 Query: 1082 IRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLR 1141 +RDDRISLIAN+L VPD S +PLAV++ +R CT DK+ LK+VL RHPGTS VH+R Sbjct: 1097 VRDDRISLIANDLAVPDLSAIGVAKPLAVTITSRMCTPDKIGELKRVLTRHPGTSDVHVR 1156 Query: 1142 LISG-DRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS 1180 + D+ T L+L SLRV+PS AL GDLK LLGP CL S Sbjct: 1157 YVGARDKTTMLKLSDSLRVSPSSALFGDLKALLGPSCLTS 1196 >tr|Q0SHU0|Q0SHU0_RHOSR Tax_Id=101510 (dnaE1)SubName: Full=DNA-directed DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus sp.] Length = 1178 Score = 1862 bits (4822), Expect = 0.0 Identities = 910/1173 (77%), Positives = 1012/1173 (86%), Gaps = 2/1173 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAK+ P+ E ERL M A+GMTDHGNM+GASEFYN A K G+KP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGPLFEEAERLGMSAVGMTDHGNMYGASEFYNEAKKQGIKP 63 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+T+R+ WGD SQK DDVSGSG+YTH+TMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S EGQLGKW+RMD EL+A H EGIIATTGCPSGE+QTRLRLGHDREALE+AAKW+EI+G Sbjct: 124 SIEGQLGKWARMDEELIATHHEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGK 183 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIERRVREGL+EI +KL+IPPLATNDCHYVT++AA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLEISKKLEIPPLATNDCHYVTKEAAENHEALLCIQTGK 243 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDP RFKFDGDGYYLK AAEMR LWDD +PGACD+TLLIAERVQSY DVW DRMPI Sbjct: 244 TLSDPTRFKFDGDGYYLKPAAEMRALWDDQVPGACDNTLLIAERVQSYDDVWAHHDRMPI 303 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEG +WL EVM GL RRFP G ++Y+ RA+YEI VI + GFP+YFL+V DLI Sbjct: 304 FPVPEGETQGTWLRKEVMRGLDRRFPDGPPEEYLARADYEIGVILEMGFPAYFLVVGDLI 363 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+AR V IRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPER S P Sbjct: 364 NHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDIDFDD 423 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYA DKWG DRVAQVITFGTIKTKAA+KDSAR+ +GQPGFAIAD+ITKALPPP Sbjct: 424 RRRGEMVRYATDKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKALPPP 483 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDI +SGITDP HER+KEA EVR LI+++PDV IYQTA+GLEGLIRNAGVHACAVI Sbjct: 484 IMAKDISVSGITDPNHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHACAVI 543 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPL +AIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI+NIKANR Sbjct: 544 MSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIDNIKANR 603 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDL++L LDD+ TYELL RG+TLGVFQLDG MRDLLRRMQPT F DIVAVLALYRP Sbjct: 604 GIDLDLDTLALDDQATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLALYRP 663 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKN RQ VKPIHPELEEPL+EIL++TYGLIVYQEQIM IAQKVA Y+ Sbjct: 664 GPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILADTYGLIVYQEQIMQIAQKVAGYS 723 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 +G+AD LR+AMGKKKL VLE Y GF EGM AN FSE A+KALWDTILPFAGYAFNKSHA Sbjct: 724 LGQADILRRAMGKKKLSVLEEAYAGFREGMLANEFSEPAIKALWDTILPFAGYAFNKSHA 783 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVS+WT YLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRK+GITVLPPDVNES V Sbjct: 784 AGYGLVSFWTGYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKMGITVLPPDVNESEV 843 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 NFASVG+DIRF S+I R K KF DFSDYLNKID +AC+KKVTESL Sbjct: 844 NFASVGEDIRFGMGAVRNVGANVVGSIIKARKEKSKFVDFSDYLNKIDAAACSKKVTESL 903 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--SDSGADAVFTIKVP 965 IKAG FDSLGHPRKGL LVH DA+D+V+GTKKAEA+GQFDLFGG +D +VF +K+P Sbjct: 904 IKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAIGQFDLFGGDDADESISSVFNVKIP 963 Query: 966 EDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGI 1025 ++EW+ KH+LALEREMLGLYVSGHPLNGV H+L+AQ DTAIP IL+GD+ + QV VGGI Sbjct: 964 DEEWDSKHRLALEREMLGLYVSGHPLNGVEHVLSAQSDTAIPTILEGDIKDGTQVTVGGI 1023 Query: 1026 LAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDD 1085 LA+VNRR+NKNG+ WASAQLEDLTGGIEV+FFP YS YG D+ +D+VVLV A+V+IRDD Sbjct: 1024 LASVNRRINKNGLTWASAQLEDLTGGIEVLFFPQAYSVYGMDVTEDSVVLVKARVSIRDD 1083 Query: 1086 RISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISG 1145 RISLIAN+L VPD S +PLAVSLP RQCT DK+ AL+QVL RHPGTS VH+RLI G Sbjct: 1084 RISLIANDLAVPDLSAVGVAKPLAVSLPLRQCTKDKLGALRQVLTRHPGTSDVHVRLIGG 1143 Query: 1146 DRITTLELDQSLRVTPSPALMGDLKELLGPGCL 1178 +T ++D LRV PS ALMGDLK LLGP CL Sbjct: 1144 TEVTLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|C1AU36|C1AU36_RHOOB Tax_Id=632772 (dnaE)SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 1178 Score = 1861 bits (4820), Expect = 0.0 Identities = 912/1173 (77%), Positives = 1012/1173 (86%), Gaps = 2/1173 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAK+ P+ E ERL+M A+GMTDHGNM+GASEFYN A K G+KP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGPLFEEAERLEMSAVGMTDHGNMYGASEFYNVAKKQGIKP 63 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAYVAP SRF+T+R+ WGD SQK DDVSGSG+YTH+TMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYVAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S EGQLGKW+RMD EL+A H EGIIATTGCPSGE+QTRLRLGHDREALE+AAKW+EI+G Sbjct: 124 SIEGQLGKWARMDEELIATHHEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGK 183 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIERRVREGL+EI + L IPPLATNDCHYVT+DAA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLEISKTLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 243 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDP RFKFDGDGY+LKSAAEMR LWDD +PGACD+TLLIAERVQSY DVW DRMPI Sbjct: 244 TLSDPTRFKFDGDGYFLKSAAEMRALWDDQVPGACDNTLLIAERVQSYDDVWAHHDRMPI 303 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEG +WL EVM GL RRFPSG ++Y+ RA+YEI VI + GFP+YFL+V DLI Sbjct: 304 FPVPEGETQGTWLRKEVMRGLDRRFPSGPPEEYLARADYEIGVILEMGFPAYFLVVGDLI 363 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+AR V IRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPER S P Sbjct: 364 NHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDIDFDD 423 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYA DKWG DRVAQVITFGTIKTKAA+KDSAR+ +GQPGFAIAD+ITKALPPP Sbjct: 424 RRRGEMVRYATDKWGSDRVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKALPPP 483 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDI +SGITDP HER+KEA EVR LI+++PDV IYQTA+GLEGLIRNAGVHACAVI Sbjct: 484 IMAKDISVSGITDPNHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHACAVI 543 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPL +AIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAI+NIKANR Sbjct: 544 MSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIDNIKANR 603 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GI+LDL++L LDD TYELL RG+TLGVFQLDG MRDLLRRMQPT F DIVAVLALYRP Sbjct: 604 GIELDLDTLELDDTATYELLSRGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLALYRP 663 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMGMNAHNDYADRKN RQ VKPIHPELEEPL+EIL++TYGLIVYQEQIM IAQKVA Y+ Sbjct: 664 GPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILADTYGLIVYQEQIMQIAQKVAGYS 723 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 +G+AD LR+AMGKKKL VLE Y GF EGM AN FSE A+KALWDTILPFAGYAFNKSHA Sbjct: 724 LGQADILRRAMGKKKLSVLEEAYAGFREGMLANEFSEPAIKALWDTILPFAGYAFNKSHA 783 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVS+WT YLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRK+GITVLPPDVNES V Sbjct: 784 AGYGLVSFWTGYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKMGITVLPPDVNESEV 843 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 NFASVG+DIRF S+I R K KF DFSDYLNKID +AC+KKVTESL Sbjct: 844 NFASVGEDIRFGMGAVRNVGANVVGSIIKARKEKSKFVDFSDYLNKIDAAACSKKVTESL 903 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD--AVFTIKVP 965 IKAG FDSLGHPRKGL LVH DA+D+V+GTKKAEA+GQFDLFGG D+ +VF +K+P Sbjct: 904 IKAGGFDSLGHPRKGLMLVHADAIDAVMGTKKAEAIGQFDLFGGDDADESIASVFNVKIP 963 Query: 966 EDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGI 1025 E+EW+ KH+LALEREMLGLYVSGHPLNGV H+L+AQ DTAIP IL+GD+ + QV VGGI Sbjct: 964 EEEWDSKHRLALEREMLGLYVSGHPLNGVEHVLSAQSDTAIPTILEGDIKDGTQVTVGGI 1023 Query: 1026 LAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDD 1085 LA+VNRR+NKNG+ WASAQLEDLTGGIEV+FFP YS YG D+ +D+VVLV A+V+IRDD Sbjct: 1024 LASVNRRINKNGLTWASAQLEDLTGGIEVLFFPQAYSVYGMDVTEDSVVLVKARVSIRDD 1083 Query: 1086 RISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISG 1145 RISLIAN+L VPD S +PLAVSLP RQCT DK+ AL+QVL RHPGTS VH+RLI G Sbjct: 1084 RISLIANDLAVPDLSAVGVAKPLAVSLPLRQCTKDKLGALRQVLTRHPGTSDVHVRLIGG 1143 Query: 1146 DRITTLELDQSLRVTPSPALMGDLKELLGPGCL 1178 +T ++D LRV PS ALMGDLK LLGP CL Sbjct: 1144 TEVTLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|C1A0V4|C1A0V4_RHOE4 Tax_Id=234621 (dnaE)SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 1202 Score = 1804 bits (4673), Expect = 0.0 Identities = 883/1173 (75%), Positives = 998/1173 (85%), Gaps = 2/1173 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAK+ M E RL+M A+GMTDHGNM+GAS+FYN A AG+KP Sbjct: 28 SFVHLHNHTEYSMLDGAAKVGAMFEEAARLEMTAVGMTDHGNMYGASQFYNEAKSAGIKP 87 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+T+R+ WGD SQK DDVSGSG+YTH+TMVAENATGLRNLFKLSSLA Sbjct: 88 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 147 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S EGQLGKW RMD EL+A HAEGIIATTGCPSGE+QTRLRLGHDREALE+AAKW+EI+G Sbjct: 148 SIEGQLGKWPRMDEELIAAHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGP 207 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIERRVREGL++IG++L IPPLATNDCHYVT+DAA NHEALLC+QTGK Sbjct: 208 DNFFLELMDHGLSIERRVREGLLDIGKQLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 267 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDP RFKFDGDGYYLKSAAEMR +WD+++PGACD+T+ I ERVQSY DVW DRMPI Sbjct: 268 TLSDPTRFKFDGDGYYLKSAAEMRAIWDNEVPGACDNTVAIGERVQSYEDVWAFHDRMPI 327 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEGH ++L EVM GL RRFPSG Q+Y+ RA+YEI VI + GFP+YFL+V DLI Sbjct: 328 FPVPEGHTQQTFLRAEVMRGLDRRFPSGPPQEYLARADYEIGVINEMGFPAYFLVVGDLI 387 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+A+ V IRVGPGRGSAAGSLVAYAMGITNIDPIP+GLLFERFLNPER S P Sbjct: 388 NHAKDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPYGLLFERFLNPERVSMPDIDIDFDD 447 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYA DKWG D+VAQVITFGTIKTKAA+KDSAR+ +G+PGFAIAD+ITKALPPP Sbjct: 448 RRRGEMVRYATDKWGNDKVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKALPPP 507 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDI +SGITDP HER+KEA EVR LI++ PDV IY+TA GLEGLIRNAGVHACAVI Sbjct: 508 IMAKDISVSGITDPKHERYKEAVEVRALIDSSPDVAKIYKTAVGLEGLIRNAGVHACAVI 567 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPLT+AIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGD +ENIKANR Sbjct: 568 MSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIKANR 627 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDL++LP+DD TYELL RG+TLGVFQLDGG MR+LL+ MQPT F DIVA LALYRP Sbjct: 628 GIDLDLDTLPMDDAATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALALYRP 687 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMG++AH YA RKN + VKPIHPELEEPL EILSETYGLI+YQEQIM +AQKVA YT Sbjct: 688 GPMGVDAHISYAKRKNALEDVKPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVAGYT 747 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 +G+AD LR+AMGKKKL LE Y GF +GM N FSE A+KALWDT+LPFAGYAFNKSH+ Sbjct: 748 LGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNKSHS 807 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDK+A+YLADCRKLGITVLPPDVNES V Sbjct: 808 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAIYLADCRKLGITVLPPDVNESRV 867 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 +FA+VG DIRF S+I R+ K KFTDFSDYL KID ACNKKVTESL Sbjct: 868 DFATVGDDIRFGMGSVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDAMACNKKVTESL 927 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--SDSGADAVFTIKVP 965 IKAGAFDSLGHPRKGL LVH DA+DSV+ TKKAEA+GQFDLFGG +D +VF +K+P Sbjct: 928 IKAGAFDSLGHPRKGLMLVHADAIDSVMSTKKAEAIGQFDLFGGAEADESITSVFDVKIP 987 Query: 966 EDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGI 1025 E+EW+ KH+LALEREMLGLYVSGHPLNGV H+L Q DT+I AIL+G V + AQV +GGI Sbjct: 988 EEEWDSKHRLALEREMLGLYVSGHPLNGVEHILRQQSDTSIAAILEGGVQDGAQVTLGGI 1047 Query: 1026 LAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDD 1085 +A+V+RRVNKNG+ W QLEDL GGIEV+FFP Y+ YG DIA+DA+VLV A+V+IRDD Sbjct: 1048 IASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSIRDD 1107 Query: 1086 RISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISG 1145 R+SLI N+L VPD S RPL+VSLP RQCT DK++ALKQVL RHPGTS VH+RLI G Sbjct: 1108 RMSLIGNDLAVPDISAIGVARPLSVSLPLRQCTKDKLSALKQVLTRHPGTSDVHVRLIGG 1167 Query: 1146 DRITTLELDQSLRVTPSPALMGDLKELLGPGCL 1178 I+ ++D LRV PS ALMGDLK LLGP CL Sbjct: 1168 TEISLWKVDDVLRVEPSSALMGDLKALLGPSCL 1200 >tr|C3JJ26|C3JJ26_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III, alpha subunit family; EC=2.7.7.7;[Rhodococcus erythropolis SK121] Length = 1178 Score = 1803 bits (4670), Expect = 0.0 Identities = 882/1173 (75%), Positives = 998/1173 (85%), Gaps = 2/1173 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAK+ M E RL+M A+GMTDHGNM+GAS+FYN A AG+KP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVGAMFEEAARLEMTAVGMTDHGNMYGASQFYNEAKSAGIKP 63 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+T+R+ WGD SQK DDVSGSG+YTH+TMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S EGQLGKW RMD EL+A HAEGIIATTGCPSGE+QTRLRLGHDREALE+AAKW+EI+G Sbjct: 124 SIEGQLGKWPRMDEELIAAHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEIWGP 183 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGLSIERRVREGL++IG++L IPPLATNDCHYVT+DAA NHEALLC+QTGK Sbjct: 184 DNFFLELMDHGLSIERRVREGLLDIGKQLGIPPLATNDCHYVTKDAAENHEALLCIQTGK 243 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDP RFKFDGDGYYLKSAAEMR +WD+++PGACD+T+ I ERVQSY DVW DRMPI Sbjct: 244 TLSDPTRFKFDGDGYYLKSAAEMRAIWDNEVPGACDNTVAIGERVQSYEDVWAFHDRMPI 303 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYFLIVADLI 367 FPVPEGH ++L EVM GL RRFPSG Q+Y+ RA+YEI VI + GFP+YFL+V DLI Sbjct: 304 FPVPEGHTQQTFLRAEVMRGLDRRFPSGPPQEYLARADYEIGVINEMGFPAYFLVVGDLI 363 Query: 368 NYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXXXX 427 N+A+ V IRVGPGRGSAAGSLVAYAMGITNIDPIP+GLLFERFLNPER S P Sbjct: 364 NHAKDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPYGLLFERFLNPERVSMPDIDIDFDD 423 Query: 428 XXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPP 487 GEMVRYA DKWG D+VAQVITFGTIKTKAA+KDSAR+ +G+PGFAIAD+ITKALPPP Sbjct: 424 RRRGEMVRYATDKWGNDKVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKALPPP 483 Query: 488 IMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVI 547 IMAKDI +SGITDP HER+KEA EVR LI++ PDV IY+TA GLEGLIRNAGVHACAVI Sbjct: 484 IMAKDISVSGITDPKHERYKEAVEVRALIDSSPDVAKIYKTAVGLEGLIRNAGVHACAVI 543 Query: 548 MSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKANR 607 MSSEPLT+AIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGD +ENIKANR Sbjct: 544 MSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIKANR 603 Query: 608 GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALYRP 667 GIDLDL++LP+DD TYELL RG+TLGVFQLDGG MR+LL+ MQPT F DIVA LALYRP Sbjct: 604 GIDLDLDTLPMDDAATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALALYRP 663 Query: 668 GPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVASYT 727 GPMG++AH YA RKN + VKPIHPELEEPL EILSETYGLI+YQEQIM +AQKVA YT Sbjct: 664 GPMGVDAHISYAKRKNALEDVKPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVAGYT 723 Query: 728 MGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKSHA 787 +G+AD LR+AMGKKKL LE Y GF +GM N FSE A+KALWDT+LPFAGYAFNKSH+ Sbjct: 724 LGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNKSHS 783 Query: 788 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESLV 847 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDK+A+YLADCRKLGITVLPPDVNES V Sbjct: 784 AGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAIYLADCRKLGITVLPPDVNESRV 843 Query: 848 NFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTESL 907 +FA+VG DIRF S+I R+ K KFTDFSDYL KID ACNKKVTESL Sbjct: 844 DFATVGDDIRFGMGSVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDAMACNKKVTESL 903 Query: 908 IKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG--SDSGADAVFTIKVP 965 IKAGAFDSLGHPRKGL LVH DA+DSV+ TKKAEA+GQFDLFGG +D +VF +K+P Sbjct: 904 IKAGAFDSLGHPRKGLMLVHADAIDSVMSTKKAEAIGQFDLFGGAEADESITSVFDVKIP 963 Query: 966 EDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRVGGI 1025 ++EW+ KH+LALEREMLGLYVSGHPLNGV H+L Q DT+I AIL+G V + AQV +GGI Sbjct: 964 DEEWDSKHRLALEREMLGLYVSGHPLNGVEHILRQQSDTSIAAILEGGVQDGAQVTLGGI 1023 Query: 1026 LAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAIRDD 1085 +A+V+RRVNKNG+ W QLEDL GGIEV+FFP Y+ YG DIA+DA+VLV A+V+IRDD Sbjct: 1024 IASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSIRDD 1083 Query: 1086 RISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLISG 1145 R+SLI N+L VPD S RPL+VSLP RQCT DK++ALKQVL RHPGTS VH+RLI G Sbjct: 1084 RMSLIGNDLAVPDISAIGVARPLSVSLPLRQCTKDKLSALKQVLTRHPGTSDVHVRLIGG 1143 Query: 1146 DRITTLELDQSLRVTPSPALMGDLKELLGPGCL 1178 I+ ++D LRV PS ALMGDLK LLGP CL Sbjct: 1144 TEISLWKVDDVLRVEPSSALMGDLKALLGPSCL 1176 >tr|C2ATP2|C2ATP2_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Tsukamurella paurometabola DSM 20162] Length = 1185 Score = 1786 bits (4626), Expect = 0.0 Identities = 870/1184 (73%), Positives = 1000/1184 (84%), Gaps = 6/1184 (0%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 MS + SFVHLHNHTEYSMLDGAAK+ P+ AE +RL M A+GM+DHGNMFGAS+FYN+A Sbjct: 1 MSVPAQDSFVHLHNHTEYSMLDGAAKVDPLFAEAKRLGMTAVGMSDHGNMFGASDFYNTA 60 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 K +KPIIG+EAY+AP SRF+T+R+ WGDPSQK DDVSGSG+YTH+TMVAENATGLRNL Sbjct: 61 VKYDIKPIIGIEAYIAPESRFNTKRVRWGDPSQKSDDVSGSGAYTHMTMVAENATGLRNL 120 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 FKLSSLAS EGQLGKWSRMDAE++AEHAEGIIATTGCPSGEVQTRLRLGH++EALE+AAK Sbjct: 121 FKLSSLASIEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEQEALEAAAK 180 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 W+EIFG +N++LELMDHG+ IERRVREGL+EIGRKL I PLATNDCHYVT+D A +H AL Sbjct: 181 WQEIFGKENFYLELMDHGIDIERRVREGLLEIGRKLGIKPLATNDCHYVTKDKAESHGAL 240 Query: 241 LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT 300 LC+QTGKTLSDP RF+FDGDGYYLKSA EMR+LWD +PGACDST+ I ERVQSY +VW Sbjct: 241 LCIQTGKTLSDPTRFQFDGDGYYLKSAQEMRELWDAQVPGACDSTVEIGERVQSYKEVWE 300 Query: 301 PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF 360 +DRMP FPVPE H S+L EVM GL RRFP G DY++RA YE+ VI + GFP+YF Sbjct: 301 HKDRMPRFPVPENHTQESFLESEVMDGLNRRFPDGPPPDYVERARYELSVINEMGFPAYF 360 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 L+V DLI +A V IRVGPGRGSAAGSLVA+A+GITNIDPIPHGLLFERFLNPER S P Sbjct: 361 LVVGDLIAHAHEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPD 420 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YA++KWG D+VAQVITFGTIKTKAA+KDSAR+ YGQPG++IADRI Sbjct: 421 IDIDFDDRRRGEMITYASEKWGSDKVAQVITFGTIKTKAAIKDSARVIYGQPGYSIADRI 480 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 TKALPPPIMAKDI + GITDPAHER+KEA EVR LIETDPDV+ IY A GLEGLIRNAG Sbjct: 481 TKALPPPIMAKDISVKGITDPAHERYKEAVEVRQLIETDPDVKKIYDMALGLEGLIRNAG 540 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIMS +PLT+AIP+WKR QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDA+ Sbjct: 541 VHACAVIMSCDPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAL 600 Query: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 NIK NRGIDLD++ LPLDD+ TY+LL RG TLGVFQLDGGPMRDLLRRMQPT+F DIVA Sbjct: 601 ANIKHNRGIDLDMDQLPLDDETTYQLLQRGNTLGVFQLDGGPMRDLLRRMQPTKFEDIVA 660 Query: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 V ALYRPGPMG+NAHNDYADRKN RQ VKPIHPELEEPL EILSET+GLIVYQEQIM IA Sbjct: 661 VGALYRPGPMGVNAHNDYADRKNGRQQVKPIHPELEEPLAEILSETFGLIVYQEQIMQIA 720 Query: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 QKVA Y++G+AD LR+AMGKKK E+L+ Y GF +GM NGFS+ A+ ALW+T+LPFAGY Sbjct: 721 QKVAGYSLGQADLLRRAMGKKKKEILDEAYGGFQQGMLDNGFSQPAITALWETVLPFAGY 780 Query: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 AFNKSHAA YGLVSYWTAYLKANYPAEYMA LLTSVGDDKDKAA+YL DCR+LGITVLPP Sbjct: 781 AFNKSHAAAYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAAIYLGDCRRLGITVLPP 840 Query: 841 DVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACN 900 DVNES F SVG+DIRF S++ TR KG FT FSDYL KI+++AC+ Sbjct: 841 DVNESFHAFTSVGEDIRFGMGSVRNVGEGVVASIVNTREEKGNFTSFSDYLAKIEVAACS 900 Query: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG--GSDSGA-- 956 KKVTESLIKAG FDSL HPRKGLFLVH+DA++SVL TKKAEA+GQFDLFG G + G Sbjct: 901 KKVTESLIKAGGFDSLEHPRKGLFLVHSDAIESVLSTKKAEAVGQFDLFGSMGDEGGGTE 960 Query: 957 --DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDV 1014 D VFTIKVP++EW+ KHKLALEREMLGLYVS HPL+GV H++AAQ DT IPAI++GDV Sbjct: 961 PIDDVFTIKVPDEEWDGKHKLALEREMLGLYVSAHPLDGVEHVIAAQTDTPIPAIVEGDV 1020 Query: 1015 SNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVV 1074 + QV VGGIL +VNRRVNKNG P+ASAQ+EDL+GGIEV FFP Y+ YGA++ +DAVV Sbjct: 1021 KDGTQVTVGGILQSVNRRVNKNGAPFASAQIEDLSGGIEVFFFPQAYAAYGAEVVEDAVV 1080 Query: 1075 LVNAKVAIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPG 1134 L+ A+V RDD+++LIAN++ D S +PL++++PTR CT DKV+ALKQVL RHPG Sbjct: 1081 LIKARVNFRDDKVTLIANDIAPIDLSQIGVAKPLSLTMPTRICTHDKVSALKQVLQRHPG 1140 Query: 1135 TSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCL 1178 S VH++L+SGD+ TTL LD +LRV S +LMGDLK LLGP CL Sbjct: 1141 VSDVHVKLVSGDKATTLRLDDTLRVNQSSSLMGDLKALLGPNCL 1184 >tr|D0LAQ8|D0LAQ8_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, alpha subunit;[Gordonia bronchialis] Length = 1180 Score = 1781 bits (4613), Expect = 0.0 Identities = 870/1177 (73%), Positives = 996/1177 (84%), Gaps = 5/1177 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDGAAK+ P+ AE +RL M AIGMTDHGNMFGASEFYN+A K +KP Sbjct: 4 SFVHLHNHTEYSMLDGAAKVAPLFAEAKRLGMTAIGMTDHGNMFGASEFYNTAVKNDIKP 63 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAYVAP SRF+T+R+TWG QK DDVSGSG+YTH+TMVAENATGLRNLFKLSSLA Sbjct: 64 IIGIEAYVAPASRFETKRVTWGTRDQKDDDVSGSGAYTHMTMVAENATGLRNLFKLSSLA 123 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S EGQLGKW+RMDA+++AE+AEGIIATTGCPSGEVQTRLRLGH+REALE+AAKW+EIFG Sbjct: 124 SIEGQLGKWARMDADIIAEYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEIFGK 183 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 +N++LELM+HGL IERRVR+GL+E+GRKL I PL TNDCHYVT+D A +HEALLCVQTGK Sbjct: 184 ENFYLELMEHGLEIERRVRDGLLEVGRKLGIKPLVTNDCHYVTKDHAKSHEALLCVQTGK 243 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPRDRMPI 307 TLSDP RFKFDGDGYYLKSAAEMR+LWD +PGACD+TL I ERVQSYADV+T RDRMP+ Sbjct: 244 TLSDPTRFKFDGDGYYLKSAAEMRELWDSVVPGACDNTLEIGERVQSYADVFTHRDRMPV 303 Query: 308 FPVPEGHDPASWLHHEVMAGLRRRFPSG--LGQDYIDRAEYEIKVICDKGFPSYFLIVAD 365 FPVPEG +WL EV GL R +G + ++Y +RA YE+ VI GFP+YFL+V D Sbjct: 304 FPVPEGESQQTWLRKEVAKGLAERRFAGAEVPREYQERANYELDVIIQMGFPAYFLVVGD 363 Query: 366 LINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXXX 425 LI +A+ V IRVGPGRGSAAGSLVA+A+GITNIDPIPHGLLFERFLNPER S P Sbjct: 364 LIRHAQEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDIDIDF 423 Query: 426 XXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALP 485 GEMVRYA D+WG D+VAQVITFGTIKTKAA+KDSAR+ +GQPGF+IADRITKALP Sbjct: 424 DDRRRGEMVRYATDRWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFSIADRITKALP 483 Query: 486 PPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACA 545 PPIMAKDIP+ GITDP HERF EAAEVR LIETDPDV+ IY TA GLEGLIRNAGVHACA Sbjct: 484 PPIMAKDIPVWGITDPDHERFNEAAEVRSLIETDPDVKKIYDTALGLEGLIRNAGVHACA 543 Query: 546 VIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIKA 605 VIMSSEPLT+AIP+W+R QDGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 544 VIMSSEPLTDAIPVWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIKI 603 Query: 606 NRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLALY 665 NRG DLDL+ PLDD TYELL RG+TLGVFQLDGG MR+LL+RMQPT F DIVAVLALY Sbjct: 604 NRGFDLDLDDAPLDDPKTYELLARGDTLGVFQLDGGAMRELLKRMQPTGFEDIVAVLALY 663 Query: 666 RPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVAS 725 RPGPMGMNAHNDYADRKN RQ VKPIHPEL EPL+EIL++TYGLIVYQEQIM IAQKVA Sbjct: 664 RPGPMGMNAHNDYADRKNGRQEVKPIHPELAEPLKEILADTYGLIVYQEQIMQIAQKVAG 723 Query: 726 YTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNKS 785 Y++G+AD LR+AMGKKK EVL AE++GF GM ANGFS A+KALWDTILPFAGYAFNKS Sbjct: 724 YSLGRADILRRAMGKKKAEVLAAEFEGFEAGMKANGFSGPAIKALWDTILPFAGYAFNKS 783 Query: 786 HAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNES 845 HAAGYGLVS+WTAYLKANYPAEYMAGLLTSVGDDKDKAA+YLADCRKLGITVLPPDVNES Sbjct: 784 HAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRKLGITVLPPDVNES 843 Query: 846 LVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVTE 905 NFA+VG DIRF S++ R KGKFT FSDYL KID++ACNKKVTE Sbjct: 844 QRNFAAVGTDIRFGLAAIRNVGSGVVSSILAAREEKGKFTSFSDYLGKIDVTACNKKVTE 903 Query: 906 SLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF---GGSDSGADAVFTI 962 SLIKAGAFDSL HPRKGLFLVH +AV+SVLGTKKAEA+GQFDLF GG+D VF + Sbjct: 904 SLIKAGAFDSLAHPRKGLFLVHGEAVESVLGTKKAEAIGQFDLFGDAGGADDTMAEVFAV 963 Query: 963 KVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRV 1022 KVP++EW+ KHKLA+EREMLGLYVSGHPL+GV H +AA DT+I +L+G++++ AQ+ + Sbjct: 964 KVPDEEWDTKHKLAIEREMLGLYVSGHPLSGVEHAIAAHTDTSITTLLEGNIADGAQITI 1023 Query: 1023 GGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKVAI 1082 GGI+++V RRVNK G PWA+ LED+ GG+EV FFP ++ YG DI D +VL+ A+V + Sbjct: 1024 GGIISSVTRRVNKKGEPWAAVTLEDMVGGVEVYFFPRAFAAYGMDIVADNIVLIKARVNL 1083 Query: 1083 RDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRL 1142 RDD + + AN+L VPD S+A A +P+A++L R CT D+V ALKQVL RHPG++ VH+ L Sbjct: 1084 RDDSMMISANDLAVPDLSSAGATKPVALTLSARLCTPDRVQALKQVLTRHPGSADVHVTL 1143 Query: 1143 ISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 +S +R T L L +SLRVTPS ALMGDLK LLGP CLG Sbjct: 1144 VSDERQTQLRLTESLRVTPSSALMGDLKALLGPSCLG 1180 >tr|Q8FNW4|Q8FNW4_COREF Tax_Id=152794 SubName: Full=Putative DNA polymerase III alpha subunit;[Corynebacterium efficiens] Length = 1204 Score = 1591 bits (4119), Expect = 0.0 Identities = 791/1183 (66%), Positives = 930/1183 (78%), Gaps = 11/1183 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDG AKI + EV R MPA+G+TDHGNM+G++ FY T+AGVKP Sbjct: 22 SFVHLHNHTEYSMLDGMAKIDMLADEVNRQQMPAVGITDHGNMYGSNAFYRKMTEAGVKP 81 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+ R+ WG+P QK DDVS SG+Y H TM+AENATGLRNLF LSS+A Sbjct: 82 IIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLHQTMLAENATGLRNLFYLSSMA 141 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDAE++AE AEGIIATTGCPSG+VQTRLRLG EALE+AA W++I+G Sbjct: 142 SYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQDIYGR 201 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL IE RVR L+EIGRKL++PPL TNDCHYV A HEA+LCVQTGK Sbjct: 202 DNYFLELMDHGLDIENRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 261 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--PRDRM 305 TL D +RFKFDG GYY+K+A +MR LWDD +P CD+TL IAERVQ Y ++W P DRM Sbjct: 262 TLHDEDRFKFDGSGYYIKTAEQMRSLWDDTVPDGCDNTLWIAERVQDYGEIWEEHPHDRM 321 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 P+ VPEGH P SWLHHEVMAGL RFP + Q+YI+RAEYEI VI KG+PSYFLIVA Sbjct: 322 PVADVPEGHTPTSWLHHEVMAGLEDRFPGQQVPQEYIERAEYEISVIDMKGYPSYFLIVA 381 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 ++I +ARS+ I VGPGRGSAAG+LVAYA+ ITNIDPI HGLLFERFLNPERPSAP Sbjct: 382 EIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPDIDID 441 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAAD+WG+D++AQVITFGT+KTK A+KDSAR+ +GQPG+ IADRITK L Sbjct: 442 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQFGQPGYQIADRITKVL 501 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PPPIMAKDIPLSGITDP HER+ EA EVR LIETDPDVR IY TARGLEG++R AGVHAC Sbjct: 502 PPPIMAKDIPLSGITDPEHERYNEAGEVRALIETDPDVRKIYDTARGLEGVVRQAGVHAC 561 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIMSS+PL E IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 562 AVIMSSQPLLECIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 621 Query: 605 ANR-GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 ANR G +DLE+L ++D+ TY+LL RGETLG+FQLDGG M++LL+RMQPT FNDIVA LA Sbjct: 622 ANRDGKVVDLENLSIEDEETYKLLSRGETLGIFQLDGGGMQELLKRMQPTGFNDIVAALA 681 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL EIL ETYGLIVYQEQIM I+QKV Sbjct: 682 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLAEILGETYGLIVYQEQIMKISQKV 741 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A+YT G+AD RKAMGKKK EVL E+ F GM ANGFS A+K LWDTILPFAGYAFN Sbjct: 742 ANYTAGQADGFRKAMGKKKPEVLAKEFAAFEAGMKANGFSADAIKTLWDTILPFAGYAFN 801 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK A+YLADCR LGI VL PD+N Sbjct: 802 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKTAIYLADCRHLGIRVLSPDIN 861 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES +NF VG DIR+ S+I TR KG F DFSDYL+KID CNK++ Sbjct: 862 ESALNFMPVGTDIRYGLGAIRNVGSEVVDSIIETRQSKGMFRDFSDYLDKIDTLPCNKRI 921 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD----AV 959 TESLIKAGAFDSLGH RKGL LV+ DAVDSV+ TKKA GQFDLF + A+ Sbjct: 922 TESLIKAGAFDSLGHTRKGLMLVYEDAVDSVIATKKAADKGQFDLFASFGAEAEDEVGGF 981 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F I VP+D+W+ KH+LALEREMLGLYVSGHPL+G LAAQ+DT + I+ G++ + A+ Sbjct: 982 FQIAVPDDKWDRKHELALEREMLGLYVSGHPLDGYEDALAAQIDTPLTTIIAGELRHGAE 1041 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVN 1077 V VGGI++ V+RR + K+G PWA +ED G +E++ F YS G+ I +D ++L Sbjct: 1042 VTVGGIISGVDRRFSKKDGSPWAIVTMEDHNGASVELLVFNKVYSIVGSLIVEDNIILAK 1101 Query: 1078 AKVAIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 A V+IRDDR+SL ++L VP+ + PL +++ T QCT+ ++ LKQVL + G S Sbjct: 1102 AHVSIRDDRMSLFCDDLRVPELGPGNGSGLPLRLTMRTDQCTMTNISKLKQVLVGNRGES 1161 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 V+L L+ GD T + L LRVT S +LMGDLK +GPG LG Sbjct: 1162 DVYLNLVDGDSSTVMILGDHLRVTRSASLMGDLKATMGPGILG 1204 >tr|C8NPY6|C8NPY6_COREF Tax_Id=196164 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium efficiens YS-314] Length = 1188 Score = 1591 bits (4119), Expect = 0.0 Identities = 791/1183 (66%), Positives = 930/1183 (78%), Gaps = 11/1183 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDG AKI + EV R MPA+G+TDHGNM+G++ FY T+AGVKP Sbjct: 6 SFVHLHNHTEYSMLDGMAKIDMLADEVNRQQMPAVGITDHGNMYGSNAFYRKMTEAGVKP 65 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+ R+ WG+P QK DDVS SG+Y H TM+AENATGLRNLF LSS+A Sbjct: 66 IIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLHQTMLAENATGLRNLFYLSSMA 125 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDAE++AE AEGIIATTGCPSG+VQTRLRLG EALE+AA W++I+G Sbjct: 126 SYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQDIYGR 185 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL IE RVR L+EIGRKL++PPL TNDCHYV A HEA+LCVQTGK Sbjct: 186 DNYFLELMDHGLDIENRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 245 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--PRDRM 305 TL D +RFKFDG GYY+K+A +MR LWDD +P CD+TL IAERVQ Y ++W P DRM Sbjct: 246 TLHDEDRFKFDGSGYYIKTAEQMRSLWDDTVPDGCDNTLWIAERVQDYGEIWEEHPHDRM 305 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 P+ VPEGH P SWLHHEVMAGL RFP + Q+YI+RAEYEI VI KG+PSYFLIVA Sbjct: 306 PVADVPEGHTPTSWLHHEVMAGLEDRFPGQQVPQEYIERAEYEISVIDMKGYPSYFLIVA 365 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 ++I +ARS+ I VGPGRGSAAG+LVAYA+ ITNIDPI HGLLFERFLNPERPSAP Sbjct: 366 EIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPDIDID 425 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAAD+WG+D++AQVITFGT+KTK A+KDSAR+ +GQPG+ IADRITK L Sbjct: 426 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQFGQPGYQIADRITKVL 485 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PPPIMAKDIPLSGITDP HER+ EA EVR LIETDPDVR IY TARGLEG++R AGVHAC Sbjct: 486 PPPIMAKDIPLSGITDPEHERYNEAGEVRALIETDPDVRKIYDTARGLEGVVRQAGVHAC 545 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIMSS+PL E IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 546 AVIMSSQPLLECIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 605 Query: 605 ANR-GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 ANR G +DLE+L ++D+ TY+LL RGETLG+FQLDGG M++LL+RMQPT FNDIVA LA Sbjct: 606 ANRDGKVVDLENLSIEDEETYKLLSRGETLGIFQLDGGGMQELLKRMQPTGFNDIVAALA 665 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL EIL ETYGLIVYQEQIM I+QKV Sbjct: 666 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLAEILGETYGLIVYQEQIMKISQKV 725 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A+YT G+AD RKAMGKKK EVL E+ F GM ANGFS A+K LWDTILPFAGYAFN Sbjct: 726 ANYTAGQADGFRKAMGKKKPEVLAKEFAAFEAGMKANGFSADAIKTLWDTILPFAGYAFN 785 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK A+YLADCR LGI VL PD+N Sbjct: 786 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKTAIYLADCRHLGIRVLSPDIN 845 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES +NF VG DIR+ S+I TR KG F DFSDYL+KID CNK++ Sbjct: 846 ESALNFMPVGTDIRYGLGAIRNVGSEVVDSIIETRQSKGMFRDFSDYLDKIDTLPCNKRI 905 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD----AV 959 TESLIKAGAFDSLGH RKGL LV+ DAVDSV+ TKKA GQFDLF + A+ Sbjct: 906 TESLIKAGAFDSLGHTRKGLMLVYEDAVDSVIATKKAADKGQFDLFASFGAEAEDEVGGF 965 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F I VP+D+W+ KH+LALEREMLGLYVSGHPL+G LAAQ+DT + I+ G++ + A+ Sbjct: 966 FQIAVPDDKWDRKHELALEREMLGLYVSGHPLDGYEDALAAQIDTPLTTIIAGELRHGAE 1025 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVN 1077 V VGGI++ V+RR + K+G PWA +ED G +E++ F YS G+ I +D ++L Sbjct: 1026 VTVGGIISGVDRRFSKKDGSPWAIVTMEDHNGASVELLVFNKVYSIVGSLIVEDNIILAK 1085 Query: 1078 AKVAIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 A V+IRDDR+SL ++L VP+ + PL +++ T QCT+ ++ LKQVL + G S Sbjct: 1086 AHVSIRDDRMSLFCDDLRVPELGPGNGSGLPLRLTMRTDQCTMTNISKLKQVLVGNRGES 1145 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 V+L L+ GD T + L LRVT S +LMGDLK +GPG LG Sbjct: 1146 DVYLNLVDGDSSTVMILGDHLRVTRSASLMGDLKATMGPGILG 1188 >tr|A4QFJ4|A4QFJ4_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 1194 Score = 1564 bits (4049), Expect = 0.0 Identities = 784/1184 (66%), Positives = 924/1184 (78%), Gaps = 13/1184 (1%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTE+SMLDG AKI + EV+ MPA+G+TDHGNM+G++ FY T+ G+KP Sbjct: 12 SFVHLHNHTEFSMLDGMAKIDMLADEVKAQGMPAVGITDHGNMYGSNPFYRKMTEMGIKP 71 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+E Y+AP SRF R+ WG+P QK DDVSGSG+Y H TM+AEN TGLRNLF LSS+A Sbjct: 72 IIGIETYMAPESRFKKERVRWGEPHQKSDDVSGSGAYLHQTMLAENTTGLRNLFYLSSMA 131 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDA+++AE AEGIIATTGCPSG+VQTRLRLG EALE+AA W++I+G Sbjct: 132 SYEGQLGKWPRMDADIIAERAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQDIYGR 191 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL IE RVR L+EIGRKL++PPL TNDCHYV A HEA+LCVQTGK Sbjct: 192 DNYFLELMDHGLDIETRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 251 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR--DRM 305 TL D +RFKF G GYY+KSA +MR LWDD +P CD+TL IAERVQSY ++W DRM Sbjct: 252 TLHDEDRFKFGGTGYYVKSAEQMRALWDDMVPDGCDNTLWIAERVQSYDEIWEEHSHDRM 311 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEGH P SWLHHEVMAGL+ RF + +DYI+RAEYEI VI KG+PSYFLIVA Sbjct: 312 PIADVPEGHTPTSWLHHEVMAGLKDRFSGQQVPEDYIERAEYEISVIDMKGYPSYFLIVA 371 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 +LI +ARS+ IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 372 ELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 431 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAAD+WG+D++AQVITFGT+KTK ALKDSAR+ GQPG+ IADR+ K L Sbjct: 432 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQMGQPGYQIADRVIKEL 491 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PP IMAKDIPLSGITDP H RF EA VR LIETDPDV+ IY TARGLEG++R +GVHAC Sbjct: 492 PPAIMAKDIPLSGITDPDHPRFNEAGAVRQLIETDPDVKRIYDTARGLEGVVRQSGVHAC 551 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIMSS PL + IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 552 AVIMSSVPLLDCIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 611 Query: 605 ANR-GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 ANR G LDLE+L ++D+ TY+LLGRGETLGVFQLDGG M++LL+RMQPT FNDIVA LA Sbjct: 612 ANRDGEVLDLENLAIEDEETYKLLGRGETLGVFQLDGGGMQELLKRMQPTGFNDIVAALA 671 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMG+NAH DYADRKN R+ + PIHPELEE L EIL ETYGLIVYQEQIM I+QKV Sbjct: 672 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEALEEILGETYGLIVYQEQIMRISQKV 731 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A+YT G+AD RKAMGKKK EVLE E+ F GM ANG+S+ A+K LWDTILPFAGYAFN Sbjct: 732 ANYTAGQADGFRKAMGKKKPEVLEKEFANFEGGMKANGYSDAAIKTLWDTILPFAGYAFN 791 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK+A+YL+DCR LGI VL PD+N Sbjct: 792 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKSAIYLSDCRHLGIRVLSPDIN 851 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES +NF VG DIR+ S++ TR KG F DFSDYL+KID CNK++ Sbjct: 852 ESSLNFLPVGTDIRYGLGAIRNVGAEVVDSILDTRKEKGLFKDFSDYLDKIDTLPCNKRI 911 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD----AV 959 TESLIK GAFDSLGH RKGL LV DAVDSV+ TKKA GQFDLF DS + + Sbjct: 912 TESLIKGGAFDSLGHARKGLMLVFEDAVDSVIATKKAADKGQFDLFAAFDSDNNDDVASF 971 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F I VP+DEW+ KH+LALEREMLGLYVSGHPL+G +AAQVDTA+ I+ G++ + A+ Sbjct: 972 FQITVPDDEWDRKHELALEREMLGLYVSGHPLDGYEDAIAAQVDTALTTIVAGELKHGAE 1031 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVN 1077 V VGGI++ V+RR + K+G PWA +ED G +E++ F YS G+ I +D ++L Sbjct: 1032 VTVGGIISGVDRRFSKKDGSPWAIVTIEDHNGASVELLVFNKVYSIVGSMIVEDNIILAK 1091 Query: 1078 AKVAIRDDRISLIANELVVPDF--SNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGT 1135 A ++IRDDR+SL ++L VP+ N Q PL +S+ T QCT+ + LKQVL + G Sbjct: 1092 AHISIRDDRMSLFCDDLRVPELGPGNGQG-LPLRLSMRTDQCTMSNIAKLKQVLVDNKGE 1150 Query: 1136 SQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 S V+L LI GD T + L LRV S +LMGDLK +GPG LG Sbjct: 1151 SDVYLNLIDGDNSTVMILGDHLRVNRSASLMGDLKATMGPGILG 1194 >tr|Q8NNQ8|Q8NNQ8_CORGL Tax_Id=1718 SubName: Full=DNA polymerase III alpha subunit;[Corynebacterium glutamicum] Length = 1194 Score = 1562 bits (4044), Expect = 0.0 Identities = 782/1184 (66%), Positives = 924/1184 (78%), Gaps = 13/1184 (1%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTE+SMLDG AKI + EV+ MPA+G+TDHGNM+G++ FY T+ G+KP Sbjct: 12 SFVHLHNHTEFSMLDGMAKIDMLADEVKAQGMPAVGITDHGNMYGSNPFYRKMTEMGIKP 71 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+E Y+AP SRF R+ WG+P QK DDVSGSG+Y H TM+AEN TGLRNLF LSS+A Sbjct: 72 IIGIETYMAPESRFKKERVRWGEPHQKSDDVSGSGAYLHQTMLAENTTGLRNLFYLSSMA 131 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDA+++AEHAEGIIATTGCPSG+VQTRLRLG EALE+AA W++I+G Sbjct: 132 SYEGQLGKWPRMDADIIAEHAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQDIYGR 191 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL IE RVR L+EIGRKL++PPL TNDCHYV A HEA+LCVQTGK Sbjct: 192 DNYFLELMDHGLDIETRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 251 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR--DRM 305 TL D +RFKF G GYY+KSA +MR LWDD +P CD+TL IAERVQSY ++W DRM Sbjct: 252 TLHDEDRFKFGGTGYYVKSAEQMRALWDDMVPDGCDNTLWIAERVQSYDEIWEEHSHDRM 311 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEG+ P +WLHHEVMAGL RF + +DYI+RAEYEI VI KG+PSYFLIVA Sbjct: 312 PIADVPEGYTPTTWLHHEVMAGLEDRFSGQQVPEDYIERAEYEISVIDMKGYPSYFLIVA 371 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 ++I +ARS+ IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 372 EIIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 431 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAAD+WG+D++AQVITFGT+KTK ALKDSAR+ GQPG+ IADR+ K L Sbjct: 432 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQMGQPGYQIADRVIKEL 491 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PP IMAKDIPLSGITDP H RF EA VR LIETDPDV+ IY TARGLEG++R +GVHAC Sbjct: 492 PPAIMAKDIPLSGITDPDHPRFNEAGAVRQLIETDPDVKRIYDTARGLEGVVRQSGVHAC 551 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIMSS PL + IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 552 AVIMSSVPLLDCIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 611 Query: 605 ANR-GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 ANR G LDLE+L ++D+ TY+LLGRGETLGVFQLDGG M++LL+RMQPT FNDIVA LA Sbjct: 612 ANRDGEVLDLENLAIEDEETYKLLGRGETLGVFQLDGGGMQELLKRMQPTGFNDIVAALA 671 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMG+NAH DYADRKN R+ + PIHPELEE L EIL ETYGLIVYQEQIM I+QKV Sbjct: 672 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEALEEILGETYGLIVYQEQIMRISQKV 731 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A+YT G+AD RKAMGKKK EVLE E+ F GM ANG+S+ A+K LWDTILPFAGYAFN Sbjct: 732 ANYTAGQADGFRKAMGKKKPEVLEKEFANFEGGMKANGYSDAAIKTLWDTILPFAGYAFN 791 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK+A+YL+DCR LGI VL PD+N Sbjct: 792 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKSAIYLSDCRHLGIRVLSPDIN 851 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES +NF VG DIR+ S++ TR KG F DFSDYL+KID CNK++ Sbjct: 852 ESSLNFLPVGTDIRYGLGAIRNVGAEVVDSILDTRKEKGLFKDFSDYLDKIDTLPCNKRI 911 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD----AV 959 TESLIK GAFDSLGH RKGL LV DAVDSV+ TKKA GQFDLF DS + + Sbjct: 912 TESLIKGGAFDSLGHARKGLMLVFEDAVDSVIATKKAADKGQFDLFAAFDSDNNDDVASF 971 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F I VP+DEW+ KH+LALEREMLGLYVSGHPL+G +AAQVDTA+ I+ G++ + A+ Sbjct: 972 FQITVPDDEWDRKHELALEREMLGLYVSGHPLDGYEDAIAAQVDTALTTIVAGELKHGAE 1031 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVN 1077 V VGGI++ V+RR + K+G PWA +ED G +E++ F YS G+ I +D ++L Sbjct: 1032 VTVGGIISGVDRRFSKKDGSPWAIVTIEDHNGASVELLVFNKVYSIVGSMIVEDNIILAK 1091 Query: 1078 AKVAIRDDRISLIANELVVPDF--SNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGT 1135 A ++IRDDR+SL ++L VP+ N Q PL +S+ T QCT+ + LKQVL + G Sbjct: 1092 AHISIRDDRMSLFCDDLRVPELGPGNGQG-LPLRLSMRTDQCTMSNIAKLKQVLVDNKGE 1150 Query: 1136 SQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 S V+L LI GD T + L LRV S +LMGDLK +GPG LG Sbjct: 1151 SDVYLNLIDGDNSTVMILGDHLRVNRSASLMGDLKATMGPGILG 1194 >tr|Q6M3U6|Q6M3U6_CORGL Tax_Id=1718 (dnaE1)SubName: Full=PUTATIVE DNA POLYMERASE III, ALPHA CHAIN; EC=2.7.7.7;[Corynebacterium glutamicum] Length = 1188 Score = 1562 bits (4044), Expect = 0.0 Identities = 782/1184 (66%), Positives = 924/1184 (78%), Gaps = 13/1184 (1%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTE+SMLDG AKI + EV+ MPA+G+TDHGNM+G++ FY T+ G+KP Sbjct: 6 SFVHLHNHTEFSMLDGMAKIDMLADEVKAQGMPAVGITDHGNMYGSNPFYRKMTEMGIKP 65 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+E Y+AP SRF R+ WG+P QK DDVSGSG+Y H TM+AEN TGLRNLF LSS+A Sbjct: 66 IIGIETYMAPESRFKKERVRWGEPHQKSDDVSGSGAYLHQTMLAENTTGLRNLFYLSSMA 125 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDA+++AEHAEGIIATTGCPSG+VQTRLRLG EALE+AA W++I+G Sbjct: 126 SYEGQLGKWPRMDADIIAEHAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQDIYGR 185 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL IE RVR L+EIGRKL++PPL TNDCHYV A HEA+LCVQTGK Sbjct: 186 DNYFLELMDHGLDIETRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGK 245 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR--DRM 305 TL D +RFKF G GYY+KSA +MR LWDD +P CD+TL IAERVQSY ++W DRM Sbjct: 246 TLHDEDRFKFGGTGYYVKSAEQMRALWDDMVPDGCDNTLWIAERVQSYDEIWEEHSHDRM 305 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEG+ P +WLHHEVMAGL RF + +DYI+RAEYEI VI KG+PSYFLIVA Sbjct: 306 PIADVPEGYTPTTWLHHEVMAGLEDRFSGQQVPEDYIERAEYEISVIDMKGYPSYFLIVA 365 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 ++I +ARS+ IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 366 EIIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 425 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAAD+WG+D++AQVITFGT+KTK ALKDSAR+ GQPG+ IADR+ K L Sbjct: 426 FDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQMGQPGYQIADRVIKEL 485 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PP IMAKDIPLSGITDP H RF EA VR LIETDPDV+ IY TARGLEG++R +GVHAC Sbjct: 486 PPAIMAKDIPLSGITDPDHPRFNEAGAVRQLIETDPDVKRIYDTARGLEGVVRQSGVHAC 545 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIMSS PL + IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENIK Sbjct: 546 AVIMSSVPLLDCIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIK 605 Query: 605 ANR-GIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA 663 ANR G LDLE+L ++D+ TY+LLGRGETLGVFQLDGG M++LL+RMQPT FNDIVA LA Sbjct: 606 ANRDGEVLDLENLAIEDEETYKLLGRGETLGVFQLDGGGMQELLKRMQPTGFNDIVAALA 665 Query: 664 LYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV 723 LYRPGPMG+NAH DYADRKN R+ + PIHPELEE L EIL ETYGLIVYQEQIM I+QKV Sbjct: 666 LYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEALEEILGETYGLIVYQEQIMRISQKV 725 Query: 724 ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN 783 A+YT G+AD RKAMGKKK EVLE E+ F GM ANG+S+ A+K LWDTILPFAGYAFN Sbjct: 726 ANYTAGQADGFRKAMGKKKPEVLEKEFANFEGGMKANGYSDAAIKTLWDTILPFAGYAFN 785 Query: 784 KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN 843 KSHAAGYGLVS+WTAYLKA+Y EYMA LLTSVGD+KDK+A+YL+DCR LGI VL PD+N Sbjct: 786 KSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKSAIYLSDCRHLGIRVLSPDIN 845 Query: 844 ESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKV 903 ES +NF VG DIR+ S++ TR KG F DFSDYL+KID CNK++ Sbjct: 846 ESSLNFLPVGTDIRYGLGAIRNVGAEVVDSILDTRKEKGLFKDFSDYLDKIDTLPCNKRI 905 Query: 904 TESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGAD----AV 959 TESLIK GAFDSLGH RKGL LV DAVDSV+ TKKA GQFDLF DS + + Sbjct: 906 TESLIKGGAFDSLGHARKGLMLVFEDAVDSVIATKKAADKGQFDLFAAFDSDNNDDVASF 965 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F I VP+DEW+ KH+LALEREMLGLYVSGHPL+G +AAQVDTA+ I+ G++ + A+ Sbjct: 966 FQITVPDDEWDRKHELALEREMLGLYVSGHPLDGYEDAIAAQVDTALTTIVAGELKHGAE 1025 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVN 1077 V VGGI++ V+RR + K+G PWA +ED G +E++ F YS G+ I +D ++L Sbjct: 1026 VTVGGIISGVDRRFSKKDGSPWAIVTIEDHNGASVELLVFNKVYSIVGSMIVEDNIILAK 1085 Query: 1078 AKVAIRDDRISLIANELVVPDF--SNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGT 1135 A ++IRDDR+SL ++L VP+ N Q PL +S+ T QCT+ + LKQVL + G Sbjct: 1086 AHISIRDDRMSLFCDDLRVPELGPGNGQG-LPLRLSMRTDQCTMSNIAKLKQVLVDNKGE 1144 Query: 1136 SQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 S V+L LI GD T + L LRV S +LMGDLK +GPG LG Sbjct: 1145 SDVYLNLIDGDNSTVMILGDHLRVNRSASLMGDLKATMGPGILG 1188 >tr|C7MYX4|C7MYX4_SACVD Tax_Id=471857 SubName: Full=DNA polymerase III, alpha subunit;[Saccharomonospora viridis] Length = 1193 Score = 1553 bits (4021), Expect = 0.0 Identities = 788/1190 (66%), Positives = 924/1190 (77%), Gaps = 24/1190 (2%) Query: 5 SSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAG 64 S+ SFVHLH HTEYSMLDGAAKI P+ E RL MPA+GMTDHGNM+GA +FY A KAG Sbjct: 2 SNDSFVHLHVHTEYSMLDGAAKIAPLFEEASRLGMPAVGMTDHGNMYGADDFYQQAKKAG 61 Query: 65 VKPIIGVEAYVAPGSRFDTRRITWGDPSQK-------GDDVSGSGSYTHLTMVAENATGL 117 +KPIIG+EAYVAP SRF + + WG+ Q+ G DVSG G+YTH+TM+AENATGL Sbjct: 62 IKPIIGIEAYVAPESRFHKKPVFWGNTGQRSTDEFGEGGDVSGGGAYTHMTMLAENATGL 121 Query: 118 RNLFKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALES 177 RNLF LSSLAS EG K RMD EL+AE+AEGIIATTGCPSGEVQTRLRLG EAL++ Sbjct: 122 RNLFTLSSLASMEGYYRK-PRMDRELIAEYAEGIIATTGCPSGEVQTRLRLGQKDEALQA 180 Query: 178 AAKWREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNH 237 AA +R+IFGA+N+FLELMDHGL+IER VREGL+EIG+KL + PLATND HYVT+D A +H Sbjct: 181 AADYRDIFGAENFFLELMDHGLAIERSVREGLLEIGKKLGLQPLATNDSHYVTKDQAESH 240 Query: 238 EALLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYAD 297 ALLCVQ+GKTLSDP RFKFDGDGYYLKSA EMR+ WD ++PGA DSTLLIAERVQSY + Sbjct: 241 SALLCVQSGKTLSDPTRFKFDGDGYYLKSAQEMREYWDTEVPGATDSTLLIAERVQSYEE 300 Query: 298 VWTPRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFP 357 V+ RDRMP F VPEGH SWLHHEVM GLR RFP G+ Y++RAE+E++VI KGFP Sbjct: 301 VYAHRDRMPKFEVPEGHTEESWLHHEVMRGLRWRFPDGIPDGYVERAEFELEVIAQKGFP 360 Query: 358 SYFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPS 417 SYFL+VADLINYARSV IRVGPGRGSAAGSLVAYA+GITN+DPIP LLFERFLNPER S Sbjct: 361 SYFLVVADLINYARSVGIRVGPGRGSAAGSLVAYALGITNLDPIPQNLLFERFLNPERAS 420 Query: 418 APXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIA 477 P GEMVRYA +K+G DRVAQVITFGTIKTKAA+KD+AR+H+GQPG+AIA Sbjct: 421 MPDIDIDFDDRRRGEMVRYATEKYGADRVAQVITFGTIKTKAAIKDAARVHFGQPGYAIA 480 Query: 478 DRITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIR 537 D+I+KALPPPIMAKDIPLSGI DP HER+ EAAEVR LIE DP+V+TI++TARGLEGLIR Sbjct: 481 DKISKALPPPIMAKDIPLSGIVDPEHERYPEAAEVRSLIENDPEVKTIFETARGLEGLIR 540 Query: 538 NAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIG 597 NAGVHACAVIMSSEPL IPLW+R DGAIITGWDYPSCEAIGLLKMDFLGLRNLT+IG Sbjct: 541 NAGVHACAVIMSSEPLLGTIPLWQR-DDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIG 599 Query: 598 DAIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 DAI+NI+ANRG ++DL+ L LDD Y+LLGRG+TLGVFQLDGG MRDLLRRMQPT F D Sbjct: 600 DAIDNIRANRGEEIDLDRLGLDDPEAYKLLGRGDTLGVFQLDGGAMRDLLRRMQPTGFED 659 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 I+AVLALYRPGPMGMNAHNDYADRKN RQ +KPIHPELEEPL++IL+ETYGLIVYQEQIM Sbjct: 660 IIAVLALYRPGPMGMNAHNDYADRKNGRQQIKPIHPELEEPLKDILAETYGLIVYQEQIM 719 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 IAQKVA Y+MG+AD LR+AMGKKK EVLE E++GF GM NGFS++A++ALWDTILPF Sbjct: 720 QIAQKVAGYSMGRADVLRRAMGKKKKEVLEKEFEGFRAGMKENGFSDEAIQALWDTILPF 779 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMA LLTSVGD+KDK+AVYL++CR+LGI V Sbjct: 780 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAALLTSVGDNKDKSAVYLSECRRLGIRV 839 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 LPPDVNES FA+VG DIRF S+I TR KGK+T F+D+L+ ++ Sbjct: 840 LPPDVNESGRRFAAVGDDIRFGLGAIRNVGANVVDSIIATREKKGKYTSFTDFLDSSELV 899 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGSDS 954 CNK+V ESLIKAGAFDS GH R + VH DAVD+V+ K+ EAMGQFDL FGG Sbjct: 900 VCNKRVIESLIKAGAFDSFGHTRLSMMRVHEDAVDAVVPLKRQEAMGQFDLFQGFGGGGD 959 Query: 955 GADAVFT-------IKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIP 1007 G AV T +K ++E+ K KLA EREMLGLYVS HPL+G +L I Sbjct: 960 GDTAVQTASSPLAHLKFDDEEYPRKQKLAYEREMLGLYVSAHPLDGAERILRKHAKRPIA 1019 Query: 1008 AILDGDVSNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGAD 1067 AIL D + ++ + G++ ++ RRVNK G PWA +ED+ +EV+FFP +Y+ + AD Sbjct: 1020 AIL-ADPPKEGEIEIAGLITSLERRVNKKGEPWAICTVEDMDASLEVLFFPKSYALFAAD 1078 Query: 1068 IADDAVVLVNAKVAIRDDRISLIANELVVPDFSN---AQADRPLAVSLPTRQCTIDKVTA 1124 + +D V+V +V RDD++S+ A LV D S+ + PL + + T V Sbjct: 1079 LVEDNAVVVKGRVNWRDDKMSVFAAGLVPLDLSDVALGDEEPPLTLLASAEKITKSVVIE 1138 Query: 1125 LKQVLARHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLG 1174 LKQ L H G + V L+L+ G TL VT S L+G+LK + G Sbjct: 1139 LKQTLQAHRGDTPVRLKLV-GKSSETLYALYDYPVTVSSMLLGELKSIPG 1187 >tr|C8NTP1|C8NTP1_9CORY Tax_Id=585529 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium genitalium ATCC 33030] Length = 1185 Score = 1547 bits (4006), Expect = 0.0 Identities = 772/1180 (65%), Positives = 919/1180 (77%), Gaps = 8/1180 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTE+SMLDG AK+ + EV R MPA+GMTDHGNMFG++ FY T AG+KP Sbjct: 6 SFVHLHNHTEFSMLDGMAKVDLLAEEVSRQGMPAVGMTDHGNMFGSNAFYRRMTDAGIKP 65 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+AP SRF+ +R+ WG P QKGDDVS SG+Y H TM+AENATGLRNLF+LSSLA Sbjct: 66 IIGIEAYMAPESRFNKKRVLWGTPDQKGDDVSASGAYLHQTMLAENATGLRNLFRLSSLA 125 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDAEL+AEHA+GIIATTGCPSG+VQTRLRLG +ALE+AA W++I+G Sbjct: 126 SYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQYDQALEAAAMWQDIYGK 185 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DNYFLELMDHGL+IERRVRE L+ IG LD+PPL TNDCHYV A HEA+LCVQTGK Sbjct: 186 DNYFLELMDHGLTIERRVREDLLRIGEALDLPPLVTNDCHYVLESQAPAHEAMLCVQTGK 245 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--PRDRM 305 TL DP+RFKFDG GYY+KSA +MR WDD +P CD+TL +AERV Y ++W P DRM Sbjct: 246 TLLDPDRFKFDGTGYYIKSAEQMRNDWDDMVPDGCDNTLWVAERVGDYGELWAEHPHDRM 305 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEG P +WL EV GL RF + +DY RA+YEI VI KG+PSYFLIVA Sbjct: 306 PIATVPEGETPTTWLRKEVHRGLDERFEGKEVPEDYRTRADYEIDVIDMKGYPSYFLIVA 365 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 +LI +ARS+ IRVGPGRGSAAGSLVAYA+ ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 366 ELIKHARSIGIRVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 425 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+ YAA+ WG+D++AQVITFGT+KTK A+KDSA++++GQ GF ADRI AL Sbjct: 426 FDDRRRGEMLTYAAENWGEDKIAQVITFGTVKTKQAIKDSAKVNFGQEGFQKADRINAAL 485 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PP IMAKDIPLSGITDP H+R+ EA EVR +IETDPDV IY+TARGLEG++R AGVHAC Sbjct: 486 PPAIMAKDIPLSGITDPEHDRYSEATEVRSMIETDPDVAKIYETARGLEGVVRQAGVHAC 545 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIM+S PL + IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAIENI+ Sbjct: 546 AVIMASVPLMDHIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIE 605 Query: 605 ANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL 664 NRG +DLE+L D++ YELL RG+TLGVFQLDGG M++LL+RM+PT FNDIVA LAL Sbjct: 606 KNRGETIDLEALDTDNEAVYELLSRGDTLGVFQLDGGGMQELLKRMKPTGFNDIVASLAL 665 Query: 665 YRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVA 724 YRPGPMG+NAH DYADRKN R+ + PIHPELEEPL+EIL ETYGLIVYQEQIM I+QKVA Sbjct: 666 YRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLKEILDETYGLIVYQEQIMNISQKVA 725 Query: 725 SYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNK 784 +YT G+AD RKAMGKKK EVL EY+ F +GM NG+S+ AV ALW TI PFA YAFNK Sbjct: 726 NYTAGQADGFRKAMGKKKPEVLAQEYEKFSQGMFDNGYSKAAVDALWGTIEPFASYAFNK 785 Query: 785 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE 844 SHAAGY LVSYWTAYLKANY AEYMA LLTSVGD KDK+A+YLADCR LGI+VLPPD+NE Sbjct: 786 SHAAGYALVSYWTAYLKANYAAEYMAALLTSVGDKKDKSAIYLADCRHLGISVLPPDINE 845 Query: 845 SLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVT 904 S F +V +DIR+ S++ +R KG FT+FSDYL+KID+ CNK++T Sbjct: 846 SEETFMAVDKDIRYGLAAIRNVGAEVVESIMESRRTKGAFTNFSDYLDKIDLLPCNKRIT 905 Query: 905 ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG--GSDSGADAVFTI 962 ESLIKAGAFDSL HPRKGL LV DAVDSVL TKKA GQFDLF G D A F+I Sbjct: 906 ESLIKAGAFDSLDHPRKGLLLVSDDAVDSVLTTKKAADKGQFDLFSAFGGDQEATNAFSI 965 Query: 963 KVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVRV 1022 +VP+DEWE KHKLALEREMLGLYVSGHPL+G + AQ DT +P IL+G++ + +V + Sbjct: 966 EVPDDEWEKKHKLALEREMLGLYVSGHPLDGFEEAIDAQTDTPLPKILEGEMRHGDEVTI 1025 Query: 1023 GGILAAVNRRVN-KNGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADDAVVLVNAKV 1080 GGI++ V+RR + K+G PWA LED G +EV+ F Y+ I +D ++LV A V Sbjct: 1026 GGIISGVDRRYSKKDGSPWAIVTLEDHHGAQVEVLLFNKVYALVAPQIVEDNIILVKAHV 1085 Query: 1081 AIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVH 1139 +IRDDR+SL +++ VP+ A PL ++L T QCT+D + LKQVL+ +PG S V+ Sbjct: 1086 SIRDDRMSLFGDDVKVPELGPGNGAGLPLRLTLKTEQCTMDNIRKLKQVLSNNPGDSDVY 1145 Query: 1140 LRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 L L++GD+ + L LRV S +LMGDLK +G G LG Sbjct: 1146 LNLVNGDQSQLMILGDHLRVERSGSLMGDLKAAMGAGVLG 1185 >tr|Q6NGE6|Q6NGE6_CORDI Tax_Id=1717 (dnaE)SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7;[Corynebacterium diphtheriae] Length = 1186 Score = 1546 bits (4002), Expect = 0.0 Identities = 772/1183 (65%), Positives = 916/1183 (77%), Gaps = 13/1183 (1%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDG AK+ + EV R MPA+GMTDHGNMFG+ FY + AGVKP Sbjct: 6 SFVHLHNHTEYSMLDGMAKVDMLAEEVVRQGMPAVGMTDHGNMFGSDAFYRAMKAAGVKP 65 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+APGSR R+ WG+P QK DDVS SG+Y H TM+AEN GL NLF LSS+A Sbjct: 66 IIGIEAYMAPGSRLHKERVRWGEPHQKSDDVSASGAYLHQTMLAENVEGLHNLFYLSSMA 125 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDAEL+AEHA GIIATTGCPSG+VQTRLRLG +ALE+AA W++I+G Sbjct: 126 SYEGQLGKWPRMDAELIAEHATGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQDIYGK 185 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 +NYFLELMDHGL IE RVR L+EIGRKLD+PPL TNDCHYV A HEA+LCVQTGK Sbjct: 186 ENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLCVQTGK 245 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR--DRM 305 TLSDP+RFKFDG GYY+K+A +MR+ WD +P ACD+TL IAERVQ Y ++W P DRM Sbjct: 246 TLSDPDRFKFDGSGYYIKTAEQMRETWDSLVPQACDNTLWIAERVQDYGEIWEPHPHDRM 305 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEGH P SWL HEV GLR RF G + Q+Y++RAE+EI VI KG+PSYFLIVA Sbjct: 306 PIADVPEGHTPTSWLRHEVHEGLRMRFNGGAVPQNYLERAEFEIDVIDMKGYPSYFLIVA 365 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 +LI +ARS+ IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 366 ELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDID 425 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYAA +WG+D++AQVITFGT+KTK ALKDSAR+ YGQ G+ +ADRITK L Sbjct: 426 FDDRRRGEMIRYAAQRWGEDKIAQVITFGTVKTKQALKDSARVQYGQEGYKMADRITKEL 485 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PP IMAKDIPLSGI DP H R+ EA EVR LIETDPDVR IY TARGLEG++R AGVHAC Sbjct: 486 PPAIMAKDIPLSGIMDPEHPRYGEAGEVRHLIETDPDVRKIYDTARGLEGVVRQAGVHAC 545 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIM+S PL E IP+WKR DGA+ITGW YP+CEAIGLLKMDFLGLRNLT+IGD +ENIK Sbjct: 546 AVIMASVPLLEHIPMWKRANDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDCLENIK 605 Query: 605 ANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL 664 NR +LDLE+L DD Y+LL G+TLGVFQLD G M++LL+RMQPT FNDIVA LAL Sbjct: 606 INRNEELDLEALQTDDPNVYKLLSSGDTLGVFQLDSGGMQELLKRMQPTGFNDIVASLAL 665 Query: 665 YRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVA 724 YRPGPMG+NAH DYADRKN R+ ++PIHPELEEPL+EIL ETYGLIVYQEQIM I++K+A Sbjct: 666 YRPGPMGVNAHWDYADRKNGRKPIEPIHPELEEPLKEILEETYGLIVYQEQIMEISRKLA 725 Query: 725 SYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNK 784 +YT G+AD RKAMGKKK EVL EYK F EGM +NG+S+ AV ALW TI PFA YAFNK Sbjct: 726 NYTAGEADGFRKAMGKKKPEVLAKEYKKFSEGMFSNGYSKAAVDALWGTIEPFASYAFNK 785 Query: 785 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE 844 SHAAGYGLVSYWTAYLKANY AEYMA LLTSV D KDK+A+YL++CR L I+VL PDVNE Sbjct: 786 SHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLDISVLSPDVNE 845 Query: 845 SLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVT 904 S +NF VG+DIRF ++I R KG FTDFSDYL+KIDI+ACNK+VT Sbjct: 846 SHLNFMPVGEDIRFGLGAVRNVGEDVVAAIIKAREEKGAFTDFSDYLDKIDITACNKRVT 905 Query: 905 ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADA-----V 959 ESLIKAGAFDS+ HPRKGL L+H DAVD+V TKKA GQFDLF G GADA V Sbjct: 906 ESLIKAGAFDSMDHPRKGLLLIHEDAVDAVTSTKKAADKGQFDLFAG--LGADAEEVNNV 963 Query: 960 FTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQ 1019 F +++P+ +W+ KH+LALEREMLGLYVSGHPL+G L AQ DT + IL G++ N A+ Sbjct: 964 FAVQIPDAQWDKKHQLALEREMLGLYVSGHPLDGYEEALEAQTDTPLTTILSGELRNGAE 1023 Query: 1020 VRVGGILAAVNRRVN-KNGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADDAVVLVN 1077 V +GGI++ V+RR + K+G PWA +ED G ++++ F Y+ G I +D ++L Sbjct: 1024 VTIGGIISGVDRRYSKKDGSPWAIVTVEDHHGAQVDLLVFNKIYAIVGPQIVEDNIILAK 1083 Query: 1078 AKVAIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLARHPGTS 1136 A V+IRDDR+SL ++L VP+ A PL ++L T QCT++ + LKQVL+ + G S Sbjct: 1084 AHVSIRDDRMSLFCDDLKVPELGPGNGAGLPLRLTLRTDQCTMENIAKLKQVLSNNKGDS 1143 Query: 1137 QVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 V+L ++ G+ T + L + LRV S LMGDLK +GPG LG Sbjct: 1144 DVYLNVVHGEEKTVMILGEHLRVNRSGNLMGDLKATMGPGILG 1186 >tr|C0XS28|C0XS28_9CORY Tax_Id=525263 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium lipophiloflavum DSM 44291] Length = 1186 Score = 1545 bits (4001), Expect = 0.0 Identities = 770/1185 (64%), Positives = 918/1185 (77%), Gaps = 9/1185 (0%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV R MPA+GMTDHGNMFG++ FY +A Sbjct: 2 AKNSSFVHLHNHTEFSMLDGMAKVDLLADEVIRQGMPAVGMTDHGNMFGSNAFYRRMVEA 61 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNLFKL Sbjct: 62 GVKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMLAENATGLRNLFKL 121 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 S+LAS+EGQLGKW RMDAEL+AEHA+GIIATTGCPSG+VQTRLRLG ALE+AA W++ Sbjct: 122 STLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFDAALEAAAMWQD 181 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DNYFLELMDHGL IERRVR+ L++IG L++PPL TNDCHYV A HEA+LCV Sbjct: 182 IYGKDNYFLELMDHGLHIERRVRDDLLKIGEILELPPLVTNDCHYVLESQAPAHEAMLCV 241 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--P 301 QTGKT+ D +RFKFDG GYY+KSAA+MR++WD +P CD+TL IAERV Y+++W P Sbjct: 242 QTGKTMMDQDRFKFDGTGYYIKSAAQMREIWDSTVPDGCDNTLWIAERVGDYSELWEEHP 301 Query: 302 RDRMPIFPVPEGHDPASWLHHEVMAGLRRRFP-SGLGQDYIDRAEYEIKVICDKGFPSYF 360 DRMP+ VPEG P +WL EVM GL RFP S + Q+YIDRA YE+ VI KG+PSYF Sbjct: 302 HDRMPVADVPEGETPTTWLRKEVMRGLEERFPGSEVPQEYIDRANYEVDVIDMKGYPSYF 361 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA++I +AR + IRVGPGRGSAAG+LVAYA+ ITNIDPI HGLLFERFLNPERPSAP Sbjct: 362 LIVAEIIKHAREIGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPD 421 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YAA++WG+D++AQVITFGT+KTK A+KD+A++ +GQPGF +ADRI Sbjct: 422 IDIDFDDRRRGEMITYAAERWGEDKIAQVITFGTVKTKQAIKDAAKVWFGQPGFQMADRI 481 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL GITDP HER+ EAAEVR LIETDPDV IY+TARGLEG++R AG Sbjct: 482 NSALPPAIMAKDIPLVGITDPEHERYPEAAEVRTLIETDPDVAKIYETARGLEGVVRQAG 541 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S PL E IP+WKRP DGA+ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDA+ Sbjct: 542 VHACAVIMASVPLMEHIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAM 601 Query: 601 ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA 660 NI+ NRG+ +DLE+L +D+ YELL RG+TLGVFQLD G M+DLL+RM+PT FNDIVA Sbjct: 602 ANIEKNRGVTIDLETLDIDNAAVYELLSRGDTLGVFQLDSGGMQDLLKRMKPTGFNDIVA 661 Query: 661 VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA 720 LALYRPGPMG+ AH YADRKN R+ + PIHPELEEPLREIL ETYGLIVYQEQIM I+ Sbjct: 662 SLALYRPGPMGVKAHEAYADRKNGRKPITPIHPELEEPLREILDETYGLIVYQEQIMRIS 721 Query: 721 QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY 780 QKVA+YT G+AD RKAMGKKK EVL EY F EGM +NGFS+ AV ALW TI PFA Y Sbjct: 722 QKVANYTAGEADGFRKAMGKKKPEVLAEEYSKFSEGMFSNGFSKDAVDALWGTIEPFASY 781 Query: 781 AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP 840 AFNKSHAAGY LVSYWTAYLKANY AEYMA LLTSVGD KDK+A+YLADCR LGI+VL P Sbjct: 782 AFNKSHAAGYALVSYWTAYLKANYTAEYMAALLTSVGDKKDKSAIYLADCRHLGISVLQP 841 Query: 841 DVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACN 900 D+NES NF +VG DIR+ S+ TR KG FT FSDYL+KI++ ACN Sbjct: 842 DINESEENFMAVGSDIRYGLAAVRNVGVEVVESIKETRRTKGAFTSFSDYLDKIELLACN 901 Query: 901 KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGSDSGAD 957 K++TESLIKAGAFDSLGHPRKGL LV DAVDSVL TKKA GQFDL F G D Sbjct: 902 KRITESLIKAGAFDSLGHPRKGLMLVQEDAVDSVLTTKKAADKGQFDLFASFAGEDGAEQ 961 Query: 958 AVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSND 1017 AVFTI VP+DEW+ KH LALEREMLGLYVSGHPL+G + AQ +TA+ IL G++ + Sbjct: 962 AVFTIDVPDDEWDRKHTLALEREMLGLYVSGHPLDGYEEAIDAQTNTALTDILSGEMRDG 1021 Query: 1018 AQVRVGGILAAVNRRVN-KNGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADDAVVL 1075 A+V +GG++++V+RR + K+G PWA +ED G +EV+ F YS I +D ++L Sbjct: 1022 AEVTIGGLISSVDRRFSKKDGSPWAIVTIEDHHGAQVEVLMFNKVYSLVAPQIVEDNIIL 1081 Query: 1076 VNAKVAIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLARHPG 1134 V A V+IRD+R+SL +++ VP+ A PL +++ T QCTID + LK VL+ +PG Sbjct: 1082 VKAHVSIRDERMSLFGDDVKVPELGPGNGAGLPLRLTMRTEQCTIDSIRKLKHVLSNNPG 1141 Query: 1135 TSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 S V+L L+ GD + L LRV S LM DLK LG G +G Sbjct: 1142 DSDVYLNLVHGDHSQLMVLGDHLRVERSARLMSDLKANLGAGIVG 1186 >tr|C3PHD3|C3PHD3_CORA7 Tax_Id=548476 (dnaE1)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium aurimucosum] Length = 1190 Score = 1543 bits (3994), Expect = 0.0 Identities = 771/1189 (64%), Positives = 921/1189 (77%), Gaps = 13/1189 (1%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV R MPA+GMTDHGNM+G++ FY T A Sbjct: 2 AKNSSFVHLHNHTEFSMLDGMAKVDMLADEVLRQGMPAVGMTDHGNMYGSNAFYQRMTSA 61 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AEN TGLRNLFKL Sbjct: 62 GVKPIIGIEAYLAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMLAENETGLRNLFKL 121 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS+EGQLGKW RMDAEL+AEHAEGIIATTGCPSG+VQTRLRLG EALE+AA W++ Sbjct: 122 SSLASYEGQLGKWPRMDAELIAEHAEGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD 181 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DN+FLELMDHGL IE+R R+GL+EIGRKLD+PPL TNDCHYV A +HEA+LCV Sbjct: 182 IYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPSHEAMLCV 241 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR- 302 QTGKT DP+RFKFDG GYY+KSAA+MR+LWD +P ACD+TL IAERVQ Y +W Sbjct: 242 QTGKTFMDPDRFKFDGTGYYIKSAAQMRELWDHMVPEACDNTLWIAERVQDYGAIWEEHT 301 Query: 303 -DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYF 360 DRMPI VPEG+ P SWL HEVM GL+ RF G + Q+YIDRAEYEI VI KG+PSYF Sbjct: 302 HDRMPIADVPEGYTPTSWLTHEVMEGLKDRFNGGDVPQEYIDRAEYEISVIDMKGYPSYF 361 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA+LI +ARS+ IRVGPGRGSAAG+LVAYA+ ITNIDPI HGLLFERFLNPERPSAP Sbjct: 362 LIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAPD 421 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YAA++WG+D+VAQVITFGT+KTK A+KDSA++H+GQPGF +ADRI Sbjct: 422 IDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADRI 481 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL+GI DP HER+ EA EVR +IETDPDV+ IY+TARGLEG++R AG Sbjct: 482 NGALPPAIMAKDIPLAGIMDPEHERYSEATEVRQMIETDPDVKKIYETARGLEGVVRQAG 541 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S L + IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGD + Sbjct: 542 VHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDCL 601 Query: 601 ENIKANRGIDLDLESLPLDD---KPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 ENIK NRG ++ LE L DD Y+LL RG+TLGVFQLD G M++LL+RM+PT F D Sbjct: 602 ENIKKNRGEEVHLEDLHADDPNASKVYDLLSRGDTLGVFQLDSGGMQELLKRMKPTGFKD 661 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 IVA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL+EIL ETYGLIVYQEQIM Sbjct: 662 IVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLKEILDETYGLIVYQEQIM 721 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 I+QKVA+YT G+AD RKAMGKKK EVL +Y F+ GM NG+S++A+ ALW TI PF Sbjct: 722 RISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMKDNGYSKEAMDALWGTIEPF 781 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 A YAFNKSHAAGYGLVS+WTAYLKA Y EYMA LLTSVGD KDK+A+YLADCR LGI V Sbjct: 782 ASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLADCRHLGIRV 841 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 L PDVNES+ F +VG+DIRF S++ TR KG FT FSDYL+KI+++ Sbjct: 842 LSPDVNESVETFQAVGEDIRFGMGAIRNVGGEVVDSIVKTRREKGAFTSFSDYLDKIELA 901 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDL---FGGSDS 954 AC+K+VTESLIKAGAFDSL HPRKGL L+H DAVDSV TKKA GQFDL FGG D Sbjct: 902 ACSKRVTESLIKAGAFDSLEHPRKGLMLIHEDAVDSVQTTKKAADKGQFDLFAGFGGDDQ 961 Query: 955 G-ADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1013 G + + F I +PE+ W+ KH+LALEREMLGLYVSGHPL+G L AQ DT I IL+G+ Sbjct: 962 GDSVSAFAIDIPEENWDRKHELALEREMLGLYVSGHPLDGFEEALNAQTDTPITKILNGE 1021 Query: 1014 VSNDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADD 1071 V N ++ +GGI++ V+RR +K +G PWA +ED G ++++ F YS IA+D Sbjct: 1022 VGNGQELVIGGIISGVDRRFSKRDGSPWAIVSIEDHNGAQVDILVFNQVYSLVAPQIAED 1081 Query: 1072 AVVLVNAKVAIRDDRISLIANELVVPDFSNAQ-ADRPLAVSLPTRQCTIDKVTALKQVLA 1130 ++L +V IRD+R+SL +++ VPD A PL +++ T QCT+D + LKQVL Sbjct: 1082 NIILAKVQVKIRDERMSLFCSDIRVPDLGPGNGAGLPLRLTMRTDQCTMDNIARLKQVLV 1141 Query: 1131 RHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 + G S V+L L+ G+ T + L + LRV S LMGDLK +G G LG Sbjct: 1142 NNKGESDVYLTLVDGEESTMMVLGEHLRVERSSNLMGDLKATMGAGILG 1190 >tr|C0E4Q7|C0E4Q7_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 1203 Score = 1538 bits (3983), Expect = 0.0 Identities = 764/1187 (64%), Positives = 917/1187 (77%), Gaps = 9/1187 (0%) Query: 2 SGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSAT 61 S + SFVHLHNHTEYSMLDG AKI + E RL M A+GMTDHGNMFG+ FY + T Sbjct: 17 SMAKKSSFVHLHNHTEYSMLDGMAKIDMLAEEATRLGMSAVGMTDHGNMFGSDSFYRAMT 76 Query: 62 KAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLF 121 KAG+KPIIG+EAY+APGSRFD +R WGD SQK DDVS SG+Y H TM+AE A GL NLF Sbjct: 77 KAGIKPIIGIEAYLAPGSRFDMKRQRWGDESQKSDDVSASGAYLHQTMIAETAEGLHNLF 136 Query: 122 KLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKW 181 LSS+AS+EGQLGKW RMDAEL+AEHA GII TTGCPSG++QTRLRLG +ALE+AA W Sbjct: 137 YLSSMASYEGQLGKWPRMDAELIAEHATGIIGTTGCPSGDIQTRLRLGQFDKALETAAMW 196 Query: 182 REIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALL 241 ++I+G DN+FLELMDHGL+IE RVR L+EIGR+LD+PPL TNDCHYV AH HE +L Sbjct: 197 QDIYGRDNFFLELMDHGLNIENRVRSELLEIGRRLDLPPLVTNDCHYVLESQAHAHEVML 256 Query: 242 CVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT- 300 CVQTGKT+SDP+RFKFDG GY++KSA +MR+LWDD +P ACD+TL IAERVQ Y+ +W Sbjct: 257 CVQTGKTMSDPDRFKFDGTGYFVKSAEQMRELWDDLVPDACDNTLWIAERVQDYSSIWEA 316 Query: 301 -PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPS 358 P DRMPI VPEGH P +WL H+V+ GLR RF + +YI+RAEYEI VI KG+PS Sbjct: 317 HPYDRMPIADVPEGHTPTTWLRHQVLDGLRDRFDGAEVPANYIERAEYEIGVIDMKGYPS 376 Query: 359 YFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSA 418 YFLIVA+LI +ARS+ IRVGPGRGSAAGSLVAYA+ ITNIDPI HGLLFERFLNPERPSA Sbjct: 377 YFLIVAELIKHARSIGIRVGPGRGSAAGSLVAYALTITNIDPIHHGLLFERFLNPERPSA 436 Query: 419 PXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD 478 P GEM+RYA+++WG+D++AQVITFGT+KTK A+KDSAR YGQPG+ IAD Sbjct: 437 PDIDIDFDDRRRGEMIRYASERWGEDKIAQVITFGTVKTKQAIKDSARALYGQPGYQIAD 496 Query: 479 RITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRN 538 RITK LPPPIMAKDI L+GI DP H+R+ EA EVR LIETDPDVR IY TARGLEG++R Sbjct: 497 RITKVLPPPIMAKDISLAGIMDPEHDRYTEAGEVRQLIETDPDVRQIYDTARGLEGVVRQ 556 Query: 539 AGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGD 598 AGVHACAVIM+S PL + IP+WKR DGA+ITGW YP+CEAIGLLKMDFLGLRNLT+IGD Sbjct: 557 AGVHACAVIMASVPLLDCIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGD 616 Query: 599 AIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDI 658 A+ENIK NR +DLE+L + D Y+LL RG+TLGVFQLD G M++LLRRMQPTEFNDI Sbjct: 617 ALENIKINRDETIDLENLAITDPNVYKLLARGDTLGVFQLDSGGMQELLRRMQPTEFNDI 676 Query: 659 VAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMF 718 VA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEE L++IL ETYGLIVYQEQIM Sbjct: 677 VAALALYRPGPMGVNAHLDYADRKNGRKPITPIHPELEEALKDILDETYGLIVYQEQIME 736 Query: 719 IAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFA 778 I+++VA+YT G+AD RKAMGKKK EVL AEY+ F GM +NG+S+ AV ALW TI PFA Sbjct: 737 ISRRVANYTAGEADGFRKAMGKKKPEVLAAEYEKFSAGMFSNGYSKDAVDALWGTIEPFA 796 Query: 779 GYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVL 838 YAFNKSHAAGYGLVSYWTAYLKANY AEYMA LLTSV D KDK+A+YLA+CR LGI VL Sbjct: 797 SYAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVSDKKDKSAIYLANCRHLGIAVL 856 Query: 839 PPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISA 898 PDVNES NF VGQDIRF S++ R KG + DF+DYL KID++A Sbjct: 857 SPDVNESAYNFLPVGQDIRFGLGAVRNVGEDVVASIVRERKAKGLYKDFTDYLEKIDLTA 916 Query: 899 CNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF---GGSDSG 955 CNK+VTESLIKAGAFDS+G+ RKGL +V DAVD+ +G KKA GQFDLF GG Sbjct: 917 CNKRVTESLIKAGAFDSMGYSRKGLMMVFEDAVDAAIGPKKAMDKGQFDLFSALGGESEV 976 Query: 956 ADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVS 1015 + VF+I VP+D W+ KH+LALER+MLGLYVSGHPL+G L AQVDT++ + ++ Sbjct: 977 TENVFSISVPDDTWDRKHQLALERDMLGLYVSGHPLDGFEEALDAQVDTSLSVVASEELK 1036 Query: 1016 NDAQVRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAV 1073 N A+V++GGI++AV+RRV+ K+G PWA +ED G +E++ F Y+ G I +D + Sbjct: 1037 NGAEVQIGGIISAVDRRVSKKDGSPWAIVTIEDQHGVQVEMLVFNKVYALVGPQIVEDNI 1096 Query: 1074 VLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLARH 1132 V+ A V+IRDDR + +++ VP+ A PL ++L T QCT+ ++ LKQVL + Sbjct: 1097 VVAKAHVSIRDDRFGVFCDDMKVPELGPGGGAGLPLRLTLRTDQCTMGNISRLKQVLVAN 1156 Query: 1133 PGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 G S V+L ++ G + L + LRV S +LMGDLK +GPG LG Sbjct: 1157 KGDSDVYLNVVCGTESKMMILGEHLRVNRSASLMGDLKATMGPGILG 1203 >tr|C5VD53|C5VD53_9CORY Tax_Id=553207 SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium matruchotii ATCC 14266] Length = 1186 Score = 1538 bits (3982), Expect = 0.0 Identities = 763/1181 (64%), Positives = 915/1181 (77%), Gaps = 9/1181 (0%) Query: 8 SFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAGVKP 67 SFVHLHNHTEYSMLDG AKI + E RL M A+GMTDHGNMFG+ FY + TKAG+KP Sbjct: 6 SFVHLHNHTEYSMLDGMAKIDMLAEEATRLGMSAVGMTDHGNMFGSDSFYRAMTKAGIKP 65 Query: 68 IIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLSSLA 127 IIG+EAY+APGSRFD +R WGD SQK DDVS SG+Y H TM+AE A GL NLF LSS+A Sbjct: 66 IIGIEAYLAPGSRFDMKRQRWGDESQKSDDVSASGAYLHQTMIAETAEGLHNLFYLSSMA 125 Query: 128 SFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREIFGA 187 S+EGQLGKW RMDAEL+AEHA GII TTGCPSG++QTRLRLG +ALE+AA W++I+G Sbjct: 126 SYEGQLGKWPRMDAELIAEHATGIIGTTGCPSGDIQTRLRLGQFDKALETAAMWQDIYGR 185 Query: 188 DNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQTGK 247 DN+FLELMDHGL+IE RVR L+EIGRKLD+PPL TNDCHYV AH HE +LCVQTGK Sbjct: 186 DNFFLELMDHGLNIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAHAHEVMLCVQTGK 245 Query: 248 TLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--PRDRM 305 T+SDP+RFKFDG GY++KSA +MR+LWDD +P ACD+TL IAERVQ Y+ +W P DRM Sbjct: 246 TMSDPDRFKFDGTGYFVKSAEQMRELWDDLVPDACDNTLWIAERVQDYSSIWEAHPYDRM 305 Query: 306 PIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYFLIVA 364 PI VPEGH P +WL H+V+ GLR RF + +YI+RAEYEI VI KG+PSYFLIVA Sbjct: 306 PIADVPEGHTPTTWLRHQVLDGLRDRFDGAEVPANYIERAEYEIGVIDMKGYPSYFLIVA 365 Query: 365 DLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXXXXX 424 +LI +ARS+ IRVGPGRGSAAGSLVAYA+ ITNIDPI HGLLFERFLNPERPSAP Sbjct: 366 ELIKHARSIGIRVGPGRGSAAGSLVAYALTITNIDPIHHGLLFERFLNPERPSAPDIDID 425 Query: 425 XXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL 484 GEM+RYA+++WG+D++AQVITFGT+KTK A+KDSAR YGQPG+ IADRITK L Sbjct: 426 FDDRRRGEMIRYASERWGEDKIAQVITFGTVKTKQAIKDSARALYGQPGYQIADRITKVL 485 Query: 485 PPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHAC 544 PPPIMAKDI L+GI DP H+R+ EA EVR LIETDPDVR IY TARGLEG++R AGVHAC Sbjct: 486 PPPIMAKDISLAGIMDPEHDRYTEAGEVRQLIETDPDVRQIYDTARGLEGVVRQAGVHAC 545 Query: 545 AVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENIK 604 AVIM+S PL + IP+WKR DGA+ITGW YP+CEAIGLLKMDFLGLRNLT+IGDA+ENIK Sbjct: 546 AVIMASVPLLDCIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDALENIK 605 Query: 605 ANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL 664 NR +DLE+L + D Y+LL RG+TLGVFQLD G M++LL+RMQPTEFNDIVA LAL Sbjct: 606 INRDETIDLENLAITDPNVYKLLARGDTLGVFQLDSGGMQELLKRMQPTEFNDIVAALAL 665 Query: 665 YRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKVA 724 YRPGPMG+NAH DYADRKN R+ + PIHPELEE L++IL ETYGLIVYQEQIM I+++VA Sbjct: 666 YRPGPMGVNAHLDYADRKNGRKPITPIHPELEEALKDILDETYGLIVYQEQIMEISRRVA 725 Query: 725 SYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFNK 784 +YT G+AD RKAMGKKK EVL AEY+ F GM +NG+S+ AV ALW TI PFA YAFNK Sbjct: 726 NYTAGEADGFRKAMGKKKPEVLAAEYEKFSAGMFSNGYSKDAVDALWGTIEPFASYAFNK 785 Query: 785 SHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE 844 SHAAGYGLVSYWTAYLKANY AEYMA LLTSV D KDK+A+YLA+CR LGI VL PDVNE Sbjct: 786 SHAAGYGLVSYWTAYLKANYTAEYMAALLTSVSDKKDKSAIYLANCRHLGIAVLSPDVNE 845 Query: 845 SLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNKKVT 904 S NF VGQDIRF S++ R KG + DF+DYL KID++ACNK+VT Sbjct: 846 SAYNFLPVGQDIRFGLGAVRNVGEDVVASIVRERKAKGLYKDFTDYLEKIDLTACNKRVT 905 Query: 905 ESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF---GGSDSGADAVFT 961 ESLIKAGAFDS+G+ RKGL +V DAVD+ +G KKA GQFDLF GG + VF+ Sbjct: 906 ESLIKAGAFDSMGYSRKGLMMVFEDAVDAAIGPKKAMDKGQFDLFSALGGESEVTENVFS 965 Query: 962 IKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQVR 1021 I VP+D W+ KH+LALER+MLGLYVSGHPL+G L AQVDT++ + ++ N A+V+ Sbjct: 966 ISVPDDTWDRKHQLALERDMLGLYVSGHPLDGFEEALDAQVDTSLSVVASEELKNGAEVQ 1025 Query: 1022 VGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAVVLVNAK 1079 +GGI++AV+RRV+ K+G PWA +ED G +E++ F Y+ G I +D +V+ A Sbjct: 1026 IGGIISAVDRRVSKKDGSPWAIVTIEDQHGVQVEMLVFNKVYALVGPQIVEDNIVVAKAH 1085 Query: 1080 VAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQV 1138 V+IRDDR + +++ VP+ A PL ++L T QCT+ ++ LKQVL + G S V Sbjct: 1086 VSIRDDRFGVFCDDMKVPELGPGGGAGLPLRLTLRTDQCTMGNISRLKQVLVANKGDSDV 1145 Query: 1139 HLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 +L ++ G + L + LRV S +LMGDLK +GPG LG Sbjct: 1146 YLNVVCGTESKMMILGEHLRVNRSASLMGDLKATMGPGILG 1186 >tr|C2CNK6|C2CNK6_CORST Tax_Id=525268 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium striatum ATCC 6940] Length = 1190 Score = 1538 bits (3982), Expect = 0.0 Identities = 763/1189 (64%), Positives = 918/1189 (77%), Gaps = 13/1189 (1%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV R +MPA+GMTDHGNM+G++ FY T A Sbjct: 2 AKNSSFVHLHNHTEFSMLDGMAKVDMLADEVVRQEMPAVGMTDHGNMYGSNAFYKKMTSA 61 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGL+NLFKL Sbjct: 62 GVKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMLAENATGLKNLFKL 121 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS+EGQLGKW RMDAEL+AEHAEGIIATTGCPSG+VQTRLRLG EALE+AA W++ Sbjct: 122 SSLASYEGQLGKWPRMDAELIAEHAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQD 181 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DN+FLELMDHGL IE+R R+GL+EIGRKLD+PPL TNDCHYV A +HEA+LCV Sbjct: 182 IYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPSHEAMLCV 241 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR- 302 QTGKT DP+RFKFDG GYY+KSAA+MR++WDD IP CD+TL IAERVQ Y ++W Sbjct: 242 QTGKTFMDPDRFKFDGTGYYIKSAAQMREIWDDMIPDGCDNTLWIAERVQDYGEIWEEHT 301 Query: 303 -DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVICDKGFPSYF 360 DRMPI VPEGH P SWL HEVM GL+ RFP + ++Y+ RAEYEI VI KG+PSYF Sbjct: 302 HDRMPIADVPEGHTPTSWLTHEVMEGLQDRFPGKEVPEEYVKRAEYEISVIDMKGYPSYF 361 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA+LI +ARSV IRVGPGRGSAAG+LVAYA+ ITNIDPI H LLFERFLNPERPSAP Sbjct: 362 LIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPIEHDLLFERFLNPERPSAPD 421 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM++YAAD+WG+D+VAQVITFGT+KTK A+KDSA++H+GQPGF +ADRI Sbjct: 422 IDIDFDDRRRGEMIQYAADRWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADRI 481 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL+GI DP HER+ EA EVR +IETDPDV+ IY+TARGLEG++R AG Sbjct: 482 NGALPPAIMAKDIPLAGIMDPEHERYSEATEVRQMIETDPDVKKIYETARGLEGVVRQAG 541 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S L + IP+W+RP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGD + Sbjct: 542 VHACAVIMASVRLMDHIPMWQRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDCL 601 Query: 601 ENIKANRGIDLDLESLPLDD---KPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 ENIK NRG ++ LE + DD YELL RGETLGVFQLD G M++LL+RM+PT F D Sbjct: 602 ENIKKNRGEEIHLEEIHADDPNVSKVYELLSRGETLGVFQLDSGGMQELLKRMKPTGFKD 661 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 IVA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEEPLREIL ETYGLIVYQEQIM Sbjct: 662 IVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLREILDETYGLIVYQEQIM 721 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 I+QKVA+YT G+AD RKAMGKKK EVL +Y F+ GM NG+S+ A+ ALW TI PF Sbjct: 722 RISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMQENGYSKDAMDALWGTIEPF 781 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 A YAFNKSHAAGYGLVS+WTAYLKA Y EYMA LLTSVGD KDK+A+YL+DCR LGI V Sbjct: 782 ASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGIHV 841 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 L PDVNES+ NF +VG+DIRF S++ TR KG +T FSDYL+KI+++ Sbjct: 842 LSPDVNESVENFQAVGEDIRFGMGAIRNVGSEVVESIVKTRKEKGAYTSFSDYLDKIELT 901 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGG----SD 953 AC K+VTESLIKAGAFDS+ HPRKGL L+H DAVD+V TKKA GQFDLF G Sbjct: 902 ACTKRVTESLIKAGAFDSMEHPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGFGGEEQ 961 Query: 954 SGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1013 + + F I +P++ W+ KH+LALEREMLGLYVSGHPL+G L AQ DT +P IL G+ Sbjct: 962 AEVASAFAIDIPDENWDRKHELALEREMLGLYVSGHPLDGFEEALEAQTDTPLPKILSGE 1021 Query: 1014 VSNDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADD 1071 V N ++ +GGI++ V+RR +K +G PWA +ED G ++++ F YS IA+D Sbjct: 1022 VYNGQELVIGGIISGVDRRFSKRDGSPWAIVNMEDHNGAQVDILVFNQVYSLVAPQIAED 1081 Query: 1072 AVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLA 1130 ++L +V IRD+R+SL +++ VPD A PL +++ T QCT++ + LKQVL Sbjct: 1082 NIILAKVQVKIRDERMSLFCSDIRVPDLGPGGGAGLPLRLTMRTDQCTMENIAKLKQVLV 1141 Query: 1131 RHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 + G S V+L L+ G T + L + LRV S LMGDLK +G G LG Sbjct: 1142 NNKGESDVYLTLVDGAESTMMVLGEHLRVERSGNLMGDLKATMGAGILG 1190 >tr|C0WKC4|C0WKC4_9CORY Tax_Id=525260 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium accolens ATCC 49725] Length = 1190 Score = 1536 bits (3976), Expect = 0.0 Identities = 763/1189 (64%), Positives = 917/1189 (77%), Gaps = 13/1189 (1%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV + +MPA+GMTDHGNM+G+ FY T A Sbjct: 2 AKNSSFVHLHNHTEFSMLDGMAKVDMLADEVVKQNMPAVGMTDHGNMYGSDAFYKRMTSA 61 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNLF L Sbjct: 62 GVKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMIAENATGLRNLFTL 121 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS+EGQLGKW RMDAEL+AEHA+GIIATTGCPSG+VQTRLRLG EALE+AA W++ Sbjct: 122 SSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD 181 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DN+FLELMDHGL IE+R R+GL+EIGRKLD+PPL TNDCHYV A HEA+LCV Sbjct: 182 IYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLCV 241 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT--P 301 QTGKT DP+RFKF G GYY+KSAA+MR WDD IP CD+TL IAERVQ Y++VW P Sbjct: 242 QTGKTFMDPDRFKFGGTGYYIKSAAQMRDTWDDLIPDGCDNTLWIAERVQDYSEVWEEHP 301 Query: 302 RDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPS-GLGQDYIDRAEYEIKVICDKGFPSYF 360 DRMPI VPEGH P SWL HEVM GL++RFP + ++YI+RA+YEI VI KG+PSYF Sbjct: 302 HDRMPIADVPEGHTPTSWLTHEVMEGLQQRFPGRDVPEEYIERAKYEISVIEMKGYPSYF 361 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA+LI YARSV IRVGPGRGSAAG+LVAYA+ ITNIDP+ H LLFERFLNPERPSAP Sbjct: 362 LIVAELIKYARSVGIRVGPGRGSAAGALVAYALTITNIDPLEHDLLFERFLNPERPSAPD 421 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YAA++WG+D+VAQVITFGT+KTK A+KDSA++H+GQPGF +ADRI Sbjct: 422 IDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADRI 481 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL GITDP HER+ EAAEVR ++ETDPDV+ IY TARGLEG++R AG Sbjct: 482 NGALPPAIMAKDIPLRGITDPDHERYSEAAEVRQMVETDPDVKKIYDTARGLEGVVRQAG 541 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S L + IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI Sbjct: 542 VHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAI 601 Query: 601 ENIKANRGIDLDLESLPLDD---KPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 ENIK NRG ++ LE L DD Y+LL RG+TLGVFQLD G M++LL+RM+PT F D Sbjct: 602 ENIKRNRGEEVQLEQLHADDPKVSKVYDLLSRGDTLGVFQLDSGGMQELLKRMKPTGFKD 661 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 IVA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL+EIL ETYGLIVYQEQIM Sbjct: 662 IVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLKEILDETYGLIVYQEQIM 721 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 I+QKVA+YT G+AD RKAMGKKK EVL +Y F+ GM NG+S+ A+ ALW TI PF Sbjct: 722 RISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMQENGYSKSAMDALWGTIEPF 781 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 A YAFNKSHAAGYGLVS+WTAYLKA Y EYMA LLTSVGD KDK+A+YL+DCR LGI V Sbjct: 782 ASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGINV 841 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 LPP VNES +F +VG+DIRF S+I +R KG FT FSDYL+KID++ Sbjct: 842 LPPSVNESEEDFQAVGEDIRFGMGAIRNVGSEVVESIIASRKAKGAFTSFSDYLDKIDLA 901 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF----GGSD 953 AC+K+VTE+LIKAGAFD PRKGL L+H DAVD+V TKKA GQFDLF GG D Sbjct: 902 ACSKRVTEALIKAGAFDDFQQPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGFGGGDD 961 Query: 954 SGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1013 + ++ F I VP+D W+ KH+LALEREMLGLYVSGHPL+G LAAQ +T + IL+ + Sbjct: 962 ASSEGAFAIDVPDDSWDRKHELALEREMLGLYVSGHPLDGFEEALAAQTNTPLTKILNDE 1021 Query: 1014 VSNDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADD 1071 V N ++ +GGI++ V+RR +K +G PWA +ED G +E++ F YS I +D Sbjct: 1022 VHNGQELIIGGIISGVDRRFSKRDGSPWAIVTVEDHNGAQVEILVFNKVYSLAAPHIVED 1081 Query: 1072 AVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLA 1130 ++L V +RD+R SL +++ VP+ A PL +++ T QCT++ + LKQVL Sbjct: 1082 NIILARVNVKVRDERRSLFCSDIRVPELGPGGGASLPLRLTMRTDQCTMENIARLKQVLV 1141 Query: 1131 RHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ++ G S V+L L+ GD+ TT+ L + LRV S LMGDLK +G G LG Sbjct: 1142 KNHGDSDVYLELVEGDQTTTMVLGEHLRVQRSGNLMGDLKATMGAGILG 1190 >tr|C2GKN1|C2GKN1_9CORY Tax_Id=548478 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium glucuronolyticum ATCC 51866] Length = 1188 Score = 1535 bits (3975), Expect = 0.0 Identities = 758/1187 (63%), Positives = 920/1187 (77%), Gaps = 12/1187 (1%) Query: 5 SSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAG 64 S+ SFVHLHNHTEYSMLDG AK+ + EV+R MPA+GMTDHGNMFG+ FY T G Sbjct: 2 SNSSFVHLHNHTEYSMLDGMAKVDLLAEEVKRQGMPAVGMTDHGNMFGSDAFYRKMTAEG 61 Query: 65 VKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLS 124 +KPIIG+E Y+AP SRF+ +R+ WG+P QK DDVS SG+Y H TM+AEN TGL+NLF LS Sbjct: 62 IKPIIGIETYMAPDSRFNKKRVLWGEPHQKRDDVSASGAYLHQTMIAENVTGLKNLFHLS 121 Query: 125 SLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREI 184 S+AS+EGQLGKW RMDAEL++EHAEGIIATTGCPSG+VQTRLRLG EAL +AA+W++I Sbjct: 122 SMASYEGQLGKWPRMDAELISEHAEGIIATTGCPSGDVQTRLRLGQFDEALAAAARWQDI 181 Query: 185 FGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQ 244 +G DN+FLELMDHGL IERRVR+ L+EIG++L++PPL TNDCHYV + +H+HEA+LCVQ Sbjct: 182 YGKDNFFLELMDHGLDIERRVRDQLLEIGKRLNLPPLVTNDCHYVLQSQSHDHEAMLCVQ 241 Query: 245 TGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR-- 302 TGKTL DP+RFKF GDGYY+K+AA+MR WD+ +PGACD+TL IAERV Y+++W P Sbjct: 242 TGKTLQDPDRFKFGGDGYYIKTAAQMRDTWDNMVPGACDNTLWIAERVGDYSEIWEPHTH 301 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFP-SGLGQDYIDRAEYEIKVICDKGFPSYFL 361 DRMPI VPEG P SWL HEVM GL+RRFP S + Q+YIDRA+YEI+VI KG+PSYFL Sbjct: 302 DRMPIADVPEGETPTSWLTHEVMEGLKRRFPDSEVPQEYIDRAKYEIEVIDFKGYPSYFL 361 Query: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXX 421 IVA+LI +ARSV IRVGPGRGSAAGSLVAYAM ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 362 IVAELIKHARSVGIRVGPGRGSAAGSLVAYAMTITNIDPMEHGLLFERFLNPERPSAPDI 421 Query: 422 XXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 EM+ YAA++WG D++AQVITFGT+KTK ALKDSAR+ +GQPG+ IADR+T Sbjct: 422 DIDFDDRRRSEMITYAAERWGADKIAQVITFGTVKTKQALKDSARVQFGQPGYQIADRVT 481 Query: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 K LPP IM KDI L GI DP +R+ EA EVR LIETDPDVR I++TARGLEG++R AGV Sbjct: 482 KLLPPAIMGKDITLKGIVDPNDKRYNEAGEVRQLIETDPDVRKIFETARGLEGVVRQAGV 541 Query: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 HACAVIM+ PL E IP+WKR QDGAIITGW YP+CEAIGLLKMDFLGLRNLT++ DA+E Sbjct: 542 HACAVIMACVPLMEHIPMWKRAQDGAIITGWPYPACEAIGLLKMDFLGLRNLTVLNDALE 601 Query: 602 NIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 NIK NRG + LE L D Y+LLGRG+TLGVFQLDGG MR+LLRRM+PT F+DIVA Sbjct: 602 NIKENRGETVVLEDLTYDAPEVYDLLGRGDTLGVFQLDGGGMRELLRRMKPTGFDDIVAA 661 Query: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 LALYRPGPMGMNAH DYADRKN ++ ++PIHPEL EPL EIL +TYGLIVYQEQIM I+Q Sbjct: 662 LALYRPGPMGMNAHMDYADRKNGKKPIEPIHPELAEPLEEILHDTYGLIVYQEQIMKISQ 721 Query: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 KVA+Y+ G+AD RKAMGKKK EVL+ +Y F GM NG+S+ A+ ALW TI PFA YA Sbjct: 722 KVANYSAGEADTFRKAMGKKKPEVLKKQYAKFSGGMKDNGYSQDAIDALWGTIEPFASYA 781 Query: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 FNKSHAAGY +VSYWTAY+K Y EYMA LLTSVGD+KDK+A+YLADCR LGI VLPPD Sbjct: 782 FNKSHAAGYSVVSYWTAYMKTFYTQEYMAALLTSVGDNKDKSAIYLADCRHLGIKVLPPD 841 Query: 842 VNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 VN SL NF +VG D+RF S++ TR KG FT FSDYL+KI+ CNK Sbjct: 842 VNASLQNFQAVGDDVRFGLGAVRNVGADVVDSIVKTRKEKGDFTSFSDYLDKIETLPCNK 901 Query: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF---GGSDSGA-- 956 +VTESLIKAGAFDSLGHPRKGL L+H DAVDSV+ TKKA GQFDLF GG DS Sbjct: 902 RVTESLIKAGAFDSLGHPRKGLALIHEDAVDSVISTKKAADKGQFDLFAGLGGGDSAGGV 961 Query: 957 -DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVS 1015 +VF ++VP++EW+ KHKLALEREMLGLYVSGHPL+G LAAQ DT + IL G++ Sbjct: 962 EPSVFDVQVPDEEWDRKHKLALEREMLGLYVSGHPLDGYEAALAAQTDTELTTILGGELK 1021 Query: 1016 NDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAV 1073 + +V++GGI+++V+RRV+K +G PWA +ED G +E++ F YS + +D + Sbjct: 1022 HGREVKIGGIISSVDRRVSKRDGSPWAIVTIEDHNGASVELLVFNKVYSIVAPQVVEDNI 1081 Query: 1074 VLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLARH 1132 +L A ++IRDDR+S+ ++L D + PL +++ T QCT++ + LK VL + Sbjct: 1082 ILAKAHISIRDDRMSVFCDDLRAADLGPGSGTGVPLRLTMTTEQCTLENIHRLKNVLVSN 1141 Query: 1133 PGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 G + V+L L+ G+ T + L ++LRV S LMGDLK +G G LG Sbjct: 1142 AGQTDVYLNLVDGNESTLMVLGENLRVDRSANLMGDLKATMGAGILG 1188 >tr|C0VV59|C0VV59_9CORY Tax_Id=548477 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium glucuronolyticum ATCC 51867] Length = 1188 Score = 1535 bits (3975), Expect = 0.0 Identities = 758/1187 (63%), Positives = 920/1187 (77%), Gaps = 12/1187 (1%) Query: 5 SSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKAG 64 S+ SFVHLHNHTEYSMLDG AK+ + EV+R MPA+GMTDHGNMFG+ FY T G Sbjct: 2 SNSSFVHLHNHTEYSMLDGMAKVDLLAEEVKRQGMPAVGMTDHGNMFGSDAFYRKMTAEG 61 Query: 65 VKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKLS 124 +KPIIG+E Y+AP SRF+ +R+ WG+P QK DDVS SG+Y H TM+AEN TGL+NLF LS Sbjct: 62 IKPIIGIETYMAPDSRFNKKRVLWGEPHQKRDDVSASGAYLHQTMIAENVTGLKNLFHLS 121 Query: 125 SLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWREI 184 S+AS+EGQLGKW RMDAEL++EHAEGIIATTGCPSG+VQTRLRLG EAL +AA+W++I Sbjct: 122 SMASYEGQLGKWPRMDAELISEHAEGIIATTGCPSGDVQTRLRLGQFDEALAAAARWQDI 181 Query: 185 FGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCVQ 244 +G DN+FLELMDHGL IERRVR+ L+EIG++L++PPL TNDCHYV + +H+HEA+LCVQ Sbjct: 182 YGKDNFFLELMDHGLDIERRVRDQLLEIGKRLNLPPLVTNDCHYVLQSQSHDHEAMLCVQ 241 Query: 245 TGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR-- 302 TGKTL DP+RFKF GDGYY+K+AA+MR WD+ +PGACD+TL IAERV Y+++W P Sbjct: 242 TGKTLQDPDRFKFGGDGYYIKTAAQMRDTWDNMVPGACDNTLWIAERVGDYSEIWEPHTH 301 Query: 303 DRMPIFPVPEGHDPASWLHHEVMAGLRRRFP-SGLGQDYIDRAEYEIKVICDKGFPSYFL 361 DRMPI VPEG P SWL HEVM GL+RRFP S + Q+YIDRA+YEI+VI KG+PSYFL Sbjct: 302 DRMPIADVPEGETPTSWLTHEVMEGLKRRFPDSEVPQEYIDRAKYEIEVIDFKGYPSYFL 361 Query: 362 IVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPXX 421 IVA+LI +ARSV IRVGPGRGSAAGSLVAYAM ITNIDP+ HGLLFERFLNPERPSAP Sbjct: 362 IVAELIKHARSVGIRVGPGRGSAAGSLVAYAMTITNIDPMEHGLLFERFLNPERPSAPDI 421 Query: 422 XXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRIT 481 EM+ YAA++WG D++AQVITFGT+KTK ALKDSAR+ +GQPG+ IADR+T Sbjct: 422 DIDFDDRRRSEMITYAAERWGADKIAQVITFGTVKTKQALKDSARVQFGQPGYQIADRVT 481 Query: 482 KALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGV 541 K LPP IM KDI L GI DP +R+ EA EVR LIETDPDVR I++TARGLEG++R AGV Sbjct: 482 KLLPPAIMGKDITLKGIVDPNDKRYNEAGEVRQLIETDPDVRKIFETARGLEGVVRQAGV 541 Query: 542 HACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIE 601 HACAVIM+ PL E IP+WKR QDGAIITGW YP+CEAIGLLKMDFLGLRNLT++ DA+E Sbjct: 542 HACAVIMACVPLMEHIPMWKRAQDGAIITGWPYPACEAIGLLKMDFLGLRNLTVLNDALE 601 Query: 602 NIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVAV 661 NIK NRG + LE L D Y+LLGRG+TLGVFQLDGG MR+LLRRM+PT F+DIVA Sbjct: 602 NIKENRGETVVLEDLTYDAPEVYDLLGRGDTLGVFQLDGGGMRELLRRMKPTGFDDIVAA 661 Query: 662 LALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIAQ 721 LALYRPGPMGMNAH DYADRKN ++ ++PIHPEL EPL EIL +TYGLIVYQEQIM I+Q Sbjct: 662 LALYRPGPMGMNAHMDYADRKNGKKPIEPIHPELAEPLEEILHDTYGLIVYQEQIMKISQ 721 Query: 722 KVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYA 781 KVA+Y+ G+AD RKAMGKKK EVL+ +Y F GM NG+S+ A+ ALW TI PFA YA Sbjct: 722 KVANYSAGEADTFRKAMGKKKPEVLKKQYAKFSGGMKDNGYSQDAIDALWGTIEPFASYA 781 Query: 782 FNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPD 841 FNKSHAAGY +VSYWTAY+K Y EYMA LLTSVGD+KDK+A+YLADCR LGI VLPPD Sbjct: 782 FNKSHAAGYSVVSYWTAYMKTFYTQEYMAALLTSVGDNKDKSAIYLADCRHLGIKVLPPD 841 Query: 842 VNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDISACNK 901 VN SL NF +VG D+RF S++ TR KG FT FSDYL+KI+ CNK Sbjct: 842 VNASLQNFQAVGDDVRFGLGAVRNVGADVVDSIVKTRKEKGDFTSFSDYLDKIETLPCNK 901 Query: 902 KVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF---GGSDSGA-- 956 +VTESLIKAGAFDSLGHPRKGL L+H DAVDSV+ TKKA GQFDLF GG DS Sbjct: 902 RVTESLIKAGAFDSLGHPRKGLALIHEDAVDSVISTKKAADKGQFDLFAGLGGGDSAGGV 961 Query: 957 -DAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVS 1015 +VF ++VP++EW+ KHKLALEREMLGLYVSGHPL+G LAAQ DT + IL G++ Sbjct: 962 EPSVFDVQVPDEEWDRKHKLALEREMLGLYVSGHPLDGYEAALAAQTDTELTTILGGELK 1021 Query: 1016 NDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTG-GIEVMFFPHTYSNYGADIADDAV 1073 + +V++GGI+++V+RRV+K +G PWA +ED G +E++ F YS + +D + Sbjct: 1022 HGREVKIGGIISSVDRRVSKRDGSPWAIVTIEDHNGASVELLVFNKVYSIVAPQVVEDNI 1081 Query: 1074 VLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLARH 1132 +L A ++IRDDR+S+ ++L D + PL +++ T QCT++ + LK VL + Sbjct: 1082 ILAKAHISIRDDRMSVFCDDLRAADLGPGSGTGVPLRLTMTTEQCTLENIHRLKNVLVSN 1141 Query: 1133 PGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 G + V+L L+ G+ T + L ++LRV S LMGDLK +G G LG Sbjct: 1142 AGQTDVYLNLVDGNESTLMVLGENLRVDRSANLMGDLKATMGAGILG 1188 >tr|C4LI70|C4LI70_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium kroppenstedtii] Length = 1199 Score = 1535 bits (3973), Expect = 0.0 Identities = 765/1192 (64%), Positives = 914/1192 (76%), Gaps = 16/1192 (1%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 ++ ++ SFVHLHNHTEYSMLDG AK+ ++ EV+R +MPA+GMTDHGNMFG+ FY + Sbjct: 5 IANMANSSFVHLHNHTEYSMLDGMAKVDLLVDEVKRQNMPAVGMTDHGNMFGSDAFYRAM 64 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 T +KPIIGVE Y+AP SRF+ +R+ WG+ QK DDVS SG+Y H TM+AENATGL+NL Sbjct: 65 TANDIKPIIGVECYMAPDSRFNKKRVRWGEAHQKRDDVSASGAYLHQTMIAENATGLKNL 124 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 F LSS+AS+EGQLGKW RMDAEL+AEH+EGIIATT CPSGEVQTRLRLG EAL++AAK Sbjct: 125 FYLSSMASYEGQLGKWPRMDAELIAEHSEGIIATTACPSGEVQTRLRLGQFDEALKAAAK 184 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 W++I+G DNYFLELMDHG+ IE+RVR L+EIGRKL+IPPL TNDCHYVT+D A +HE + Sbjct: 185 WQDIYGKDNYFLELMDHGIEIEQRVRNELLEIGRKLNIPPLVTNDCHYVTKDQARSHEVM 244 Query: 241 LCVQTGKTLSDP------NRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQS 294 LCVQTG T+++P NRF F+GDGYYLKSA EMR WDD +PG CD+TLLIAERV Sbjct: 245 LCVQTGSTMNEPTLDQGGNRFAFNGDGYYLKSAREMRDTWDDMVPGGCDNTLLIAERVGD 304 Query: 295 YADVWTPR--DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVI 351 Y+++W P DRMP + VPEG+ P SWL HEV GL++RF + Q+Y DRA+YEI VI Sbjct: 305 YSEIWEPHTHDRMPKYDVPEGYTPTSWLTHEVEQGLKKRFEGQPVPQEYTDRAKYEIGVI 364 Query: 352 CDKGFPSYFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFL 411 KG+PSYFL+VADLI +AR V IRVGPGRGSAAGSLVAYA+ ITNIDP+ HGLLFERFL Sbjct: 365 DFKGYPSYFLVVADLIKHARRVGIRVGPGRGSAAGSLVAYALTITNIDPLQHGLLFERFL 424 Query: 412 NPERPSAPXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQ 471 NPERPSAP GEM+RYAAD WG+D+VAQVITFGT+KTK ALKDSAR H+GQ Sbjct: 425 NPERPSAPDIDIDFDDRRRGEMIRYAADNWGEDKVAQVITFGTVKTKQALKDSARAHFGQ 484 Query: 472 PGFAIADRITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARG 531 PGF +A+RITKALP PIMAKDIPLSGI DP H R+ EAAEVR LIETDPDV+ I+ TARG Sbjct: 485 PGFQMAERITKALPAPIMAKDIPLSGIVDPEHPRYSEAAEVRQLIETDPDVKKIFDTARG 544 Query: 532 LEGLIRNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLR 591 LEG++R AGVHACAVIM+S PL + IP+WKR QDGAIITGW YP+CEAIGLLKMDFLGLR Sbjct: 545 LEGVVRQAGVHACAVIMASVPLLDHIPMWKRAQDGAIITGWPYPACEAIGLLKMDFLGLR 604 Query: 592 NLTIIGDAIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQ 651 NLT+IGD IENIK NRG DLDLE L + D+PTYELL RG+TLGVFQLD G MR+LL+RM Sbjct: 605 NLTVIGDCIENIKENRGEDLDLEGLSVVDEPTYELLSRGDTLGVFQLDSGGMRELLKRMG 664 Query: 652 PTEFNDIVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIV 711 PTEF+DIVA LALYRPGPMG AH YADRKN R+ + PIHPELEEPLR+IL+ETYGLIV Sbjct: 665 PTEFSDIVAALALYRPGPMGEGAHWSYADRKNGREKITPIHPELEEPLRDILAETYGLIV 724 Query: 712 YQEQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALW 771 YQEQIM I+QKVA+Y+ G+AD+ RKAMGKKK EVL E F GM NG+S+ A+ LW Sbjct: 725 YQEQIMKISQKVANYSAGQADSFRKAMGKKKPEVLAKERVSFEAGMKENGYSDDAINTLW 784 Query: 772 DTILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR 831 ILPFAGYAFNKSHAAGYGLVS+WTAYLKANY AEYMA LLTSV D KDK+A+YL+DCR Sbjct: 785 KVILPFAGYAFNKSHAAGYGLVSFWTAYLKANYTAEYMAALLTSVSDKKDKSAIYLSDCR 844 Query: 832 KLGITVLPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYL 891 LGI VL PDVN S F SVG+DIRF S++ TR KG F DF+DYL Sbjct: 845 HLGIDVLSPDVNSSKYTFQSVGKDIRFGLGAVRNVGEDVVESIVSTRREKGAFKDFTDYL 904 Query: 892 NKIDISACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF-- 949 NKID ACN++VTESLIKAGAFDS+GHPRKGL+L+H DAVDSV+ TKKA GQFDLF Sbjct: 905 NKIDTIACNRRVTESLIKAGAFDSMGHPRKGLYLIHEDAVDSVISTKKAADKGQFDLFAG 964 Query: 950 -GGSDSGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPA 1008 GG D+ F+I+VP+ EW+ KHKLALEREMLGLYVS HPL+G LAAQ DT + Sbjct: 965 LGGEAEEEDSAFSIEVPDQEWDRKHKLALEREMLGLYVSEHPLDGYEETLAAQTDTPLTT 1024 Query: 1009 ILDGDVSNDAQVRVGGILAAVNRRVN-KNGMPWASAQLEDLTG-GIEVMFFPHTYSNYGA 1066 +L G++ + + +GGI++AV+RR + K+G PWA +ED G ++++ F Y+ Sbjct: 1025 VLSGELKDKQDIVIGGIISAVDRRFSKKDGSPWAIVTIEDHNGASVDILVFNKLYALVAP 1084 Query: 1067 DIADDAVVLVNAKVAIRDDRISLIANELVVPDFS--NAQADRPLAVSLPTRQCTIDKVTA 1124 I +D ++ A + RDDR+S+ ++L D S PL + + T QCT + + Sbjct: 1085 LIVEDTIIKAKAHIKYRDDRMSVFCDDLTQADLSLNGGGKGSPLKLKMRTDQCTKENIAR 1144 Query: 1125 LKQVLARHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPG 1176 LK+VL + G S V+L L+ G T + L LRV S +LMGDLK LG G Sbjct: 1145 LKKVLVENKGDSDVYLTLVDGANSTMMVLGNHLRVDRSSSLMGDLKATLGAG 1196 >tr|C6RAU2|C6RAU2_9CORY Tax_Id=553206 SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium tuberculostearicum SK141] Length = 1190 Score = 1530 bits (3961), Expect = 0.0 Identities = 761/1189 (64%), Positives = 912/1189 (76%), Gaps = 13/1189 (1%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV R +MPA+GMTDHGNM+G+ FY T A Sbjct: 2 AKNSSFVHLHNHTEFSMLDGMAKVDMLADEVVRQEMPAVGMTDHGNMYGSDAFYRRMTGA 61 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNLF L Sbjct: 62 GVKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMIAENATGLRNLFTL 121 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS+EGQLGKW RMDAEL+AEHA+GIIATTGCPSG+VQTRLRLG EALE+AA W++ Sbjct: 122 SSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD 181 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DN+FLELMDHGL IE+R R+GL+EIGRKLD+PPL TNDCHYV A HEA+LCV Sbjct: 182 IYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLCV 241 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR- 302 QTGKT DP+RFKF G GYY+KSAA+MR+ WDD IP CD+TL IAERVQ Y ++W Sbjct: 242 QTGKTFMDPDRFKFGGTGYYIKSAAQMRETWDDMIPDGCDNTLWIAERVQDYGEIWEEHT 301 Query: 303 -DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPS-GLGQDYIDRAEYEIKVICDKGFPSYF 360 DRMPI VPEGH P SWL HEVM GL++RFP + ++YI+RA+YEI VI KG+PSYF Sbjct: 302 HDRMPIADVPEGHTPTSWLTHEVMEGLQKRFPGQDVPEEYIERAKYEISVIEMKGYPSYF 361 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA+LI +ARSV IRVGPGRGSAAG+LVAYA+ ITNIDP+ H LLFERFLNPERPSAP Sbjct: 362 LIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPLEHDLLFERFLNPERPSAPD 421 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YAA++WG+D+VAQVITFGT+KTK A+KDSA++H+GQPGF +ADRI Sbjct: 422 IDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADRI 481 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL GITDP HER+ EAAEVR ++E+DPDV+ IY TARGLEG++R AG Sbjct: 482 NGALPPAIMAKDIPLKGITDPDHERYSEAAEVRQMVESDPDVKKIYDTARGLEGVVRQAG 541 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S L + IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI Sbjct: 542 VHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAI 601 Query: 601 ENIKANRGIDLDLESLPLDD---KPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 ENIK NRG ++ LE L DD Y+LL RG+TLGVFQLD G M++LL+RM+PT F D Sbjct: 602 ENIKRNRGEEIHLEQLHADDPKVSKVYDLLSRGDTLGVFQLDSGGMQELLKRMKPTGFKD 661 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 IVA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL+EIL ETYGLIVYQEQIM Sbjct: 662 IVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLKEILDETYGLIVYQEQIM 721 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 I+QKVA+YT G+AD RKAMGKKK EVL +Y F+ GM NG+S+ A+ ALW TI PF Sbjct: 722 RISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMQENGYSKSAMDALWGTIEPF 781 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 A YAFNKSHAAGYGLVS+WTAYLKA Y EYMA LLTSVGD KDK+A+YL+DCR LGI V Sbjct: 782 ASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGIKV 841 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 LPP VNES +F +VG+DIRF S+I +R KG FT FSDYL+KI+++ Sbjct: 842 LPPSVNESEEDFQAVGEDIRFGMGAIRNVGSEVVESIIKSRHDKGAFTSFSDYLDKIELA 901 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF----GGSD 953 AC K+VTE+LIKAGAFD L HPRKGL L+H DAVD+V TKKA GQFDLF GG D Sbjct: 902 ACTKRVTEALIKAGAFDDLNHPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGIGGGED 961 Query: 954 SGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1013 A F + +PED W+ KH+LALEREMLGLYVSGHPL+G LAAQ DT + IL+ + Sbjct: 962 DAASNAFALDIPEDNWDRKHELALEREMLGLYVSGHPLDGFEEALAAQTDTPLTKILNDE 1021 Query: 1014 VSNDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADD 1071 V N ++ +GGI++ V+RR +K +G PWA +ED G +E++ F YS I +D Sbjct: 1022 VHNGQELIIGGIISGVDRRFSKRDGSPWAIVTVEDHNGAQVEILVFNKVYSLVAPQIVED 1081 Query: 1072 AVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLA 1130 ++L V +RD+R SL +++ VP+ A PL +++ T QCT++ + LKQVL Sbjct: 1082 NIILARVNVKVRDERRSLFCSDIRVPELGPGGGAGLPLRLTMRTDQCTMENIARLKQVLL 1141 Query: 1131 RHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ++ G S V+L L+ G TT+ L LRV S LMGDLK +G G LG Sbjct: 1142 KNQGESDVYLELVDGSESTTMILGDHLRVERSGNLMGDLKATMGAGILG 1190 >tr|C2BNL7|C2BNL7_9CORY Tax_Id=525264 (dnaE)SubName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7;[Corynebacterium pseudogenitalium ATCC 33035] Length = 1194 Score = 1530 bits (3961), Expect = 0.0 Identities = 761/1189 (64%), Positives = 912/1189 (76%), Gaps = 13/1189 (1%) Query: 4 SSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSATKA 63 + + SFVHLHNHTE+SMLDG AK+ + EV R +MPA+GMTDHGNM+G+ FY T A Sbjct: 6 AKNSSFVHLHNHTEFSMLDGMAKVDMLADEVVRQEMPAVGMTDHGNMYGSDAFYRRMTGA 65 Query: 64 GVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL 123 GVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNLF L Sbjct: 66 GVKPIIGIEAYMAPESRFNKKRVLWGTPDQKRDDVSASGAYLHQTMIAENATGLRNLFTL 125 Query: 124 SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE 183 SSLAS+EGQLGKW RMDAEL+AEHA+GIIATTGCPSG+VQTRLRLG EALE+AA W++ Sbjct: 126 SSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFNEALEAAAMWQD 185 Query: 184 IFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEALLCV 243 I+G DN+FLELMDHGL IE+R R+GL+EIGRKLD+PPL TNDCHYV A HEA+LCV Sbjct: 186 IYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLCV 245 Query: 244 QTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWTPR- 302 QTGKT DP+RFKF G GYY+KSAA+MR+ WDD IP CD+TL IAERVQ Y ++W Sbjct: 246 QTGKTFMDPDRFKFGGTGYYIKSAAQMRETWDDMIPDGCDNTLWIAERVQDYGEIWEEHT 305 Query: 303 -DRMPIFPVPEGHDPASWLHHEVMAGLRRRFPS-GLGQDYIDRAEYEIKVICDKGFPSYF 360 DRMPI VPEGH P SWL HEVM GL++RFP + ++YI+RA+YEI VI KG+PSYF Sbjct: 306 HDRMPIADVPEGHTPTSWLTHEVMEGLQKRFPGQDVPEEYIERAKYEISVIEMKGYPSYF 365 Query: 361 LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPX 420 LIVA+LI +ARSV IRVGPGRGSAAG+LVAYA+ ITNIDP+ H LLFERFLNPERPSAP Sbjct: 366 LIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPLEHDLLFERFLNPERPSAPD 425 Query: 421 XXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI 480 GEM+ YAA++WG+D+VAQVITFGT+KTK A+KDSA++H+GQPGF +ADRI Sbjct: 426 IDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADRI 485 Query: 481 TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG 540 ALPP IMAKDIPL GITDP HER+ EAAEVR ++E+DPDV+ IY TARGLEG++R AG Sbjct: 486 NGALPPAIMAKDIPLKGITDPDHERYSEAAEVRQMVESDPDVKKIYDTARGLEGVVRQAG 545 Query: 541 VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI 600 VHACAVIM+S L + IP+WKRP DGA ITGWDYP+CEAIGLLKMDFLGLRNLT+IGDAI Sbjct: 546 VHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAIGLLKMDFLGLRNLTVIGDAI 605 Query: 601 ENIKANRGIDLDLESLPLDD---KPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFND 657 ENIK NRG ++ LE L DD Y+LL RG+TLGVFQLD G M++LL+RM+PT F D Sbjct: 606 ENIKRNRGEEIHLEQLHADDPKVSKVYDLLSRGDTLGVFQLDSGGMQELLKRMKPTGFKD 665 Query: 658 IVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIM 717 IVA LALYRPGPMG+NAH DYADRKN R+ + PIHPELEEPL+EIL ETYGLIVYQEQIM Sbjct: 666 IVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEEPLKEILDETYGLIVYQEQIM 725 Query: 718 FIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPF 777 I+QKVA+YT G+AD RKAMGKKK EVL +Y F+ GM NG+S+ A+ ALW TI PF Sbjct: 726 RISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGMQENGYSKSAMDALWGTIEPF 785 Query: 778 AGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITV 837 A YAFNKSHAAGYGLVS+WTAYLKA Y EYMA LLTSVGD KDK+A+YL+DCR LGI V Sbjct: 786 ASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLSDCRHLGIKV 845 Query: 838 LPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYLNKIDIS 897 LPP VNES +F +VG+DIRF S+I +R KG FT FSDYL+KI+++ Sbjct: 846 LPPSVNESEEDFQAVGEDIRFGMGAIRNVGSEVVESIIKSRHDKGAFTSFSDYLDKIELA 905 Query: 898 ACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLF----GGSD 953 AC K+VTE+LIKAGAFD L HPRKGL L+H DAVD+V TKKA GQFDLF GG D Sbjct: 906 ACTKRVTEALIKAGAFDDLNHPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGIGGGED 965 Query: 954 SGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGD 1013 A F + +PED W+ KH+LALEREMLGLYVSGHPL+G LAAQ DT + IL+ + Sbjct: 966 DAASNAFALDIPEDNWDRKHELALEREMLGLYVSGHPLDGFEEALAAQTDTPLTKILNDE 1025 Query: 1014 VSNDAQVRVGGILAAVNRRVNK-NGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADIADD 1071 V N ++ +GGI++ V+RR +K +G PWA +ED G +E++ F YS I +D Sbjct: 1026 VHNGQELIIGGIISGVDRRFSKRDGSPWAIVTVEDHNGAQVEILVFNKVYSLVAPQIVED 1085 Query: 1072 AVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQVLA 1130 ++L V +RD+R SL +++ VP+ A PL +++ T QCT++ + LKQVL Sbjct: 1086 NIILARVNVKVRDERRSLFCSDIRVPELGPGGGAGLPLRLTMRTDQCTMENIARLKQVLL 1145 Query: 1131 RHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLG 1179 ++ G S V+L L+ G TT+ L LRV S LMGDLK +G G LG Sbjct: 1146 KNQGESDVYLELVDGSESTTMILGDHLRVERSGNLMGDLKATMGAGILG 1194 >tr|Q4JW74|Q4JW74_CORJK Tax_Id=306537 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium jeikeium] Length = 1189 Score = 1528 bits (3957), Expect = 0.0 Identities = 767/1183 (64%), Positives = 908/1183 (76%), Gaps = 16/1183 (1%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 MSGSS FVHLHNHTEYSMLDG AK+ + EV R MPA+GMTDHGNM+GA FY + Sbjct: 1 MSGSS---FVHLHNHTEYSMLDGMAKVDLLAKEVVRQGMPAVGMTDHGNMYGADAFYRAM 57 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 T AGVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNL Sbjct: 58 TAAGVKPIIGIEAYIAPESRFNQQRVRWGKPEQKSDDVSASGAYLHQTMIAENATGLRNL 117 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 F LSS+AS+EGQLGKW RMDAEL+A+H+EGIIATTGCPSG+VQTRLRLG +ALE+A Sbjct: 118 FYLSSMASYEGQLGKWPRMDAELIAQHSEGIIATTGCPSGDVQTRLRLGQFDKALEAAGM 177 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 W++I+G DN+FLELMDHGL IE+RVR+ L+EIGRKL++PPL TNDCHYV A HE + Sbjct: 178 WQDIYGKDNFFLELMDHGLEIEKRVRDDLLEIGRKLELPPLVTNDCHYVLEQQAPAHEVM 237 Query: 241 LCVQTGKTLSDPN------RFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQS 294 LCVQTG TL +P RF F G GYY++SA ++R WD ++P CD+TL +AERVQ Sbjct: 238 LCVQTGSTLDEPTLDQGGKRFAFSGTGYYVRSAEDIRAQWDKEVPKGCDNTLWVAERVQD 297 Query: 295 YADVWT--PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVI 351 Y++VW P DRMPI VPEGH P +WL HEVM GL RFP + +YIDRA+YEI VI Sbjct: 298 YSEVWEEHPHDRMPIADVPEGHTPTTWLTHEVMKGLEERFPGKEVPAEYIDRAKYEISVI 357 Query: 352 CDKGFPSYFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFL 411 KG+PSYFLIVA+LI +ARSV IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFL Sbjct: 358 DMKGYPSYFLIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFL 417 Query: 412 NPERPSAPXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQ 471 NPERPSAP GEM+RYAAD+WG+D++AQVITFGT+KTK A+KDSAR HYGQ Sbjct: 418 NPERPSAPDIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARAHYGQ 477 Query: 472 PGFAIADRITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARG 531 GF +ADRITKALPP IMAKDIPL GITDP HER+ EAAEVR LIETDPDV IY+ A G Sbjct: 478 AGFQMADRITKALPPAIMAKDIPLHGITDPEHERYPEAAEVRQLIETDPDVAKIYKDALG 537 Query: 532 LEGLIRNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLR 591 LEG+IR AGVHACAVIMSS PL + IP+WKR QDGA+ITGW YP+CEAIGLLKMDFLGLR Sbjct: 538 LEGVIRQAGVHACAVIMSSVPLLDCIPMWKRKQDGALITGWPYPACEAIGLLKMDFLGLR 597 Query: 592 NLTIIGDAIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQ 651 NLT+IGDA+ENIKANR DLDLE+L D PTYELL RGETLGVFQLD M+ LL+RM+ Sbjct: 598 NLTVIGDALENIKANRDFDLDLENLDTVDDPTYELLARGETLGVFQLDSAGMQKLLKRMK 657 Query: 652 PTEFNDIVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIV 711 PT FNDIVA LALYRPGPMG++AH +YADRKN R+ + PIHPELEE L EIL ETYGLIV Sbjct: 658 PTGFNDIVAALALYRPGPMGVDAHWEYADRKNGRKPIVPIHPELEEALHEILEETYGLIV 717 Query: 712 YQEQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALW 771 YQEQIM I+QKVA+YT G+AD RKAMGKKK EVLE E+ F GM +NG+S A+K LW Sbjct: 718 YQEQIMKISQKVANYTAGQADGFRKAMGKKKPEVLEKEFVTFESGMKSNGYSADAIKTLW 777 Query: 772 DTILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR 831 DTILPFAGYAFNKSHAAGYGLVS+WTAYLKANY EYMA LLTSV D KDK+A+YLADCR Sbjct: 778 DTILPFAGYAFNKSHAAGYGLVSFWTAYLKANYAPEYMAALLTSVADKKDKSAIYLADCR 837 Query: 832 KLGITVLPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYL 891 LGI VL PDVN+S F SVG+DIRF S+I +R KG FTDFSDYL Sbjct: 838 HLGIRVLSPDVNDSRYTFQSVGKDIRFGLGAVRNVGEDVVNSIIASREEKGAFTDFSDYL 897 Query: 892 NKIDISACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG- 950 +KID+ A NK+VTESLIKAGAFDSLGHPRKG+ LVH DAVD+V TKKA A GQFDLF Sbjct: 898 DKIDLVAANKRVTESLIKAGAFDSLGHPRKGMVLVHEDAVDAVTATKKAAAKGQFDLFAG 957 Query: 951 -GSDSGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAI 1009 G D A VF ++VP+ EWE KH+LALER+MLGLYVSGHPL+G L AQVDT + + Sbjct: 958 LGGDDDAGDVFRVEVPDQEWERKHQLALERDMLGLYVSGHPLDGFEDALDAQVDTPLTTV 1017 Query: 1010 LDGDVSNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADI 1068 L G++ N+ +++GGI++AV RR+++NG PWA A LED G +E++ FP TY I Sbjct: 1018 LSGELPNNKDLKIGGIISAVERRIDRNGNPWAIATLEDQHGAQVELLVFPKTYQMVAPQI 1077 Query: 1069 ADDAVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQ 1127 +D +VL AK+ R+D + L ++ + + A + PL +++ Q T + L++ Sbjct: 1078 VEDNIVLAKAKINYREDDMRLFCQDIKSAELTVGAGSGVPLRLNIRVDQATPGNMANLRR 1137 Query: 1128 VLARHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLK 1170 VL+++ G S V+L LI G+ L +RV SP+LMG LK Sbjct: 1138 VLSQNKGDSDVYLTLIDGEEEVQFLLAPEMRVNKSPSLMGALK 1180 >tr|C8RRB2|C8RRB2_CORJE Tax_Id=525262 (dnaE)SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734] Length = 1189 Score = 1528 bits (3957), Expect = 0.0 Identities = 767/1183 (64%), Positives = 908/1183 (76%), Gaps = 16/1183 (1%) Query: 1 MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA 60 MSGSS FVHLHNHTEYSMLDG AK+ + EV R MPA+GMTDHGNM+GA FY + Sbjct: 1 MSGSS---FVHLHNHTEYSMLDGMAKVDLLAKEVVRQGMPAVGMTDHGNMYGADAFYRAM 57 Query: 61 TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL 120 T AGVKPIIG+EAY+AP SRF+ +R+ WG P QK DDVS SG+Y H TM+AENATGLRNL Sbjct: 58 TAAGVKPIIGIEAYIAPESRFNQQRVRWGKPEQKSDDVSASGAYLHQTMIAENATGLRNL 117 Query: 121 FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK 180 F LSS+AS+EGQLGKW RMDAEL+A+H+EGIIATTGCPSG+VQTRLRLG +ALE+A Sbjct: 118 FYLSSMASYEGQLGKWPRMDAELIAQHSEGIIATTGCPSGDVQTRLRLGQFDKALEAAGM 177 Query: 181 WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL 240 W++I+G DN+FLELMDHGL IE+RVR+ L+EIGRKL++PPL TNDCHYV A HE + Sbjct: 178 WQDIYGKDNFFLELMDHGLEIEKRVRDDLLEIGRKLELPPLVTNDCHYVLEQQAPAHEVM 237 Query: 241 LCVQTGKTLSDPN------RFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQS 294 LCVQTG TL +P RF F G GYY++SA ++R WD ++P CD+TL +AERVQ Sbjct: 238 LCVQTGSTLDEPTLDQGGKRFAFSGTGYYVRSAEDIRAQWDKEVPKGCDNTLWVAERVQD 297 Query: 295 YADVWT--PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSG-LGQDYIDRAEYEIKVI 351 Y++VW P DRMPI VPEGH P +WL HEVM GL RFP + +YIDRA+YEI VI Sbjct: 298 YSEVWEEHPHDRMPIADVPEGHTPTTWLTHEVMKGLEERFPGKEVPAEYIDRAKYEISVI 357 Query: 352 CDKGFPSYFLIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFL 411 KG+PSYFLIVA+LI +ARSV IRVGPGRGSAAG+LVAYA+ ITNIDP+ HGLLFERFL Sbjct: 358 DMKGYPSYFLIVAELIKHARSVGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFL 417 Query: 412 NPERPSAPXXXXXXXXXXXGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQ 471 NPERPSAP GEM+RYAAD+WG+D++AQVITFGT+KTK A+KDSAR HYGQ Sbjct: 418 NPERPSAPDIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARAHYGQ 477 Query: 472 PGFAIADRITKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARG 531 GF +ADRITKALPP IMAKDIPL GITDP HER+ EAAEVR LIETDPDV IY+ A G Sbjct: 478 AGFQMADRITKALPPAIMAKDIPLHGITDPEHERYPEAAEVRQLIETDPDVAKIYKDALG 537 Query: 532 LEGLIRNAGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLR 591 LEG+IR AGVHACAVIMSS PL + IP+WKR QDGA+ITGW YP+CEAIGLLKMDFLGLR Sbjct: 538 LEGVIRQAGVHACAVIMSSVPLLDCIPMWKRKQDGALITGWPYPACEAIGLLKMDFLGLR 597 Query: 592 NLTIIGDAIENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQ 651 NLT+IGDA+ENIKANR DLDLE+L D PTYELL RGETLGVFQLD M+ LL+RM+ Sbjct: 598 NLTVIGDALENIKANRDFDLDLENLDTVDDPTYELLARGETLGVFQLDSAGMQKLLKRMK 657 Query: 652 PTEFNDIVAVLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIV 711 PT FNDIVA LALYRPGPMG++AH +YADRKN R+ + PIHPELEE L EIL ETYGLIV Sbjct: 658 PTGFNDIVAALALYRPGPMGVDAHWEYADRKNGRKPIVPIHPELEEALHEILEETYGLIV 717 Query: 712 YQEQIMFIAQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALW 771 YQEQIM I+QKVA+YT G+AD RKAMGKKK EVLE E+ F GM +NG+S A+K LW Sbjct: 718 YQEQIMKISQKVANYTAGQADGFRKAMGKKKPEVLEKEFVTFESGMKSNGYSADAIKTLW 777 Query: 772 DTILPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCR 831 DTILPFAGYAFNKSHAAGYGLVS+WTAYLKANY EYMA LLTSV D KDK+A+YLADCR Sbjct: 778 DTILPFAGYAFNKSHAAGYGLVSFWTAYLKANYAPEYMAALLTSVADKKDKSAIYLADCR 837 Query: 832 KLGITVLPPDVNESLVNFASVGQDIRFXXXXXXXXXXXXXXSLIGTRSGKGKFTDFSDYL 891 LGI VL PDVN+S F SVG+DIRF S+I +R KG FTDFSDYL Sbjct: 838 HLGIRVLSPDVNDSRYTFQSVGKDIRFGLGAVRNVGEDVVNSIIASREEKGAFTDFSDYL 897 Query: 892 NKIDISACNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFG- 950 +KID+ A NK+VTESLIKAGAFDSLGHPRKG+ LVH DAVD+V TKKA A GQFDLF Sbjct: 898 DKIDLVAANKRVTESLIKAGAFDSLGHPRKGMVLVHEDAVDAVTATKKAAAKGQFDLFAG 957 Query: 951 -GSDSGADAVFTIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAI 1009 G D A VF ++VP+ EWE KH+LALER+MLGLYVSGHPL+G L AQVDT + + Sbjct: 958 LGGDDDAGDVFRVEVPDQEWERKHQLALERDMLGLYVSGHPLDGFEDALDAQVDTPLTTV 1017 Query: 1010 LDGDVSNDAQVRVGGILAAVNRRVNKNGMPWASAQLEDLTGG-IEVMFFPHTYSNYGADI 1068 L G++ N+ +++GGI++AV RR+++NG PWA A LED G +E++ FP TY I Sbjct: 1018 LSGELPNNKDLKIGGIISAVERRIDRNGNPWAIATLEDQHGAQVELLVFPKTYQMVAPQI 1077 Query: 1069 ADDAVVLVNAKVAIRDDRISLIANELVVPDFS-NAQADRPLAVSLPTRQCTIDKVTALKQ 1127 +D +VL AK+ R+D + L ++ + + A + PL +++ Q T + L++ Sbjct: 1078 VEDNIVLAKAKINYREDDMRLFCQDIKSAELTVGAGSGVPLRLNIRVDQATPGNMANLRR 1137 Query: 1128 VLARHPGTSQVHLRLISGDRITTLELDQSLRVTPSPALMGDLK 1170 VL+++ G S V+L LI G+ L +RV SP+LMG LK Sbjct: 1138 VLSQNKGDSDVYLTLIDGEEEVQFLLAPEMRVNKSPSLMGALK 1180 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.137 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 8,879,618,809 Number of extensions: 386035307 Number of successful extensions: 877119 Number of sequences better than 10.0: 3211 Number of HSP's gapped: 857593 Number of HSP's successfully gapped: 4483 Length of query: 1180 Length of database: 3,846,993,858 Length adjustment: 149 Effective length of query: 1031 Effective length of database: 2,166,988,611 Effective search space: 2234165257941 Effective search space used: 2234165257941 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 86 (37.7 bits)