BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_2455
         (260 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HR19|B2HR19_MYCMM Tax_Id=216594 SubName: Full=Transmembrane...   337   6e-91
tr|A0PP65|A0PP65_MYCUA Tax_Id=362242 SubName: Full=Transmembrane...   334   5e-90
tr|Q7VEV5|Q7VEV5_MYCBO Tax_Id=1765 SubName: Full=Probable transm...   223   1e-56
tr|P94983|P94983_MYCTU Tax_Id=1773 SubName: Full=Probable transm...   223   1e-56
tr|C6DS23|C6DS23_MYCTK Tax_Id=478434 SubName: Full=Transmembrane...   223   1e-56
tr|C1ANS1|C1ANS1_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   223   1e-56
tr|A5U305|A5U305_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   223   1e-56
tr|A1KJ65|A1KJ65_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   223   1e-56
tr|A5WMW9|A5WMW9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   223   1e-56
tr|A4KHH1|A4KHH1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   223   1e-56
tr|A2VID6|A2VID6_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   223   1e-56
tr|Q740J2|Q740J2_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   211   6e-53
tr|A0QHB7|A0QHB7_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...   206   2e-51
tr|A0Q9R4|A0Q9R4_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...   125   5e-27
tr|Q744K4|Q744K4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   125   6e-27
tr|B1MAZ1|B1MAZ1_MYCA9 Tax_Id=561007 SubName: Full=Conserved hyp...   120   2e-25
tr|B5GRJ3|B5GRJ3_STRCL Tax_Id=443255 SubName: Full=Putative unch...    55   6e-06
tr|Q0RYN5|Q0RYN5_RHOSR Tax_Id=101510 SubName: Full=Putative unch...    49   4e-04
tr|B5HLN3|B5HLN3_9ACTO Tax_Id=463191 SubName: Full=Putative unch...    49   7e-04
tr|B4V9R2|B4V9R2_9ACTO Tax_Id=465541 SubName: Full=Putative unch...    48   0.001
tr|Q0SC01|Q0SC01_RHOSR Tax_Id=101510 SubName: Full=Putative unch...    47   0.002
tr|C3JM40|C3JM40_RHOER Tax_Id=596309 SubName: Full=Putative unch...    47   0.003
tr|C0ZY90|C0ZY90_RHOE4 Tax_Id=234621 SubName: Full=Conserved hyp...    46   0.004
tr|Q7TWI5|Q7TWI5_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE CONSER...    41   0.11 
tr|O06251|O06251_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE CONSER...    41   0.15 
tr|C6DLV5|C6DLV5_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...    41   0.15 
tr|C1AHP3|C1AHP3_MYCBT Tax_Id=561275 SubName: Full=Putative tran...    41   0.15 
tr|A5U8B0|A5U8B0_MYCTA Tax_Id=419947 SubName: Full=Putative cons...    41   0.15 
tr|A1KPC1|A1KPC1_MYCBP Tax_Id=410289 SubName: Full=Possible cons...    41   0.15 
tr|A4KLW1|A4KLW1_MYCTU Tax_Id=395095 SubName: Full=Conserved tra...    41   0.15 
tr|A2VPL6|A2VPL6_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    41   0.15 
tr|B2GH12|B2GH12_KOCRD Tax_Id=378753 SubName: Full=Hypothetical ...    38   0.97 
tr|A5WT07|A5WT07_MYCTF Tax_Id=336982 SubName: Full=Conserved tra...    36   4.8  

>tr|B2HR19|B2HR19_MYCMM Tax_Id=216594 SubName: Full=Transmembrane
           protein;[Mycobacterium marinum]
          Length = 260

 Score =  337 bits (865), Expect = 6e-91
 Identities = 178/260 (68%), Positives = 178/260 (68%)

Query: 1   MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG 60
           MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG
Sbjct: 1   MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG 60

Query: 61  RLATLWNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXX 120
           RLATLWNSAFVIDEGPLYFW                     VAFFVGH            
Sbjct: 61  RLATLWNSAFVIDEGPLYFWLPCLACLLALAELHLRTARLTVAFFVGHLGATLLVAATLA 120

Query: 121 XXXEFGWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXD 180
              EFGWLPVSIAHVSDVGMSY            ISRRWRPAWI               D
Sbjct: 121 GAVEFGWLPVSIAHVSDVGMSYGALAVLGALTAAISRRWRPAWIGWWVALGLAAAVAGGD 180

Query: 181 FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXX 240
           FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWT         
Sbjct: 181 FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTSASGVALGA 240

Query: 241 XXXXXXXXXXRWTTMRVAPA 260
                     RWTTMRVAPA
Sbjct: 241 VGALVAYGLARWTTMRVAPA 260


>tr|A0PP65|A0PP65_MYCUA Tax_Id=362242 SubName: Full=Transmembrane
           protein;[Mycobacterium ulcerans]
          Length = 260

 Score =  334 bits (857), Expect = 5e-90
 Identities = 177/260 (68%), Positives = 177/260 (68%)

Query: 1   MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG 60
           MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG
Sbjct: 1   MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHG 60

Query: 61  RLATLWNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXX 120
           RLATLWNSAFVIDEGPLYFW                     VAFFVGH            
Sbjct: 61  RLATLWNSAFVIDEGPLYFWLPCLACLLALAELHLRTARLTVAFFVGHLGATLLVAATLA 120

Query: 121 XXXEFGWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXD 180
              EFGWLPVSIAHVSDVGMSY            ISRRWRPAWI               D
Sbjct: 121 GAVEFGWLPVSIAHVSDVGMSYGALAVLGALTAAISRRWRPAWIGWWVALGLAAAIAGGD 180

Query: 181 FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXX 240
           FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWT         
Sbjct: 181 FTDSGHAVSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTSANGVALGA 240

Query: 241 XXXXXXXXXXRWTTMRVAPA 260
                     RWTTMRVA A
Sbjct: 241 VGALVACGLARWTTMRVASA 260


>tr|Q7VEV5|Q7VEV5_MYCBO Tax_Id=1765 SubName: Full=Probable
           transmembrane protein;[Mycobacterium bovis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|P94983|P94983_MYCTU Tax_Id=1773 SubName: Full=Probable
           transmembrane protein; SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|C6DS23|C6DS23_MYCTK Tax_Id=478434 SubName: Full=Transmembrane
           protein;[Mycobacterium tuberculosis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|C1ANS1|C1ANS1_MYCBT Tax_Id=561275 SubName: Full=Putative
           transmembrane protein;[Mycobacterium bovis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|A5U305|A5U305_MYCTA Tax_Id=419947 SubName: Full=Putative
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|A1KJ65|A1KJ65_MYCBP Tax_Id=410289 SubName: Full=Probable
           transmembrane protein;[Mycobacterium bovis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|A5WMW9|A5WMW9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|A4KHH1|A4KHH1_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transmembrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|A2VID6|A2VID6_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 122/249 (48%), Positives = 135/249 (54%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I+ + C LAR+RFTV Y+AALASVS  +LM GPQ H +VIRHASTNLHNLAHG L TLWN
Sbjct: 2   IYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWN 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SAFVIDEGPLYFW                     VAF VGH               E GW
Sbjct: 62  SAFVIDEGPLYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LP SI+ VSDVGMSY            I  RWRPAWI                FTD+GH 
Sbjct: 122 LPWSISRVSDVGMSYGALAALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAHTRWTXXXXXXXXXXXXXXXX 247
           V+LLLGMLVTA F  P RWT  R ALL V+SGF  +LLAH+ W+                
Sbjct: 182 VALLLGMLVTACFTRPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAA 241

Query: 248 XXXRWTTMR 256
              RWT  R
Sbjct: 242 GFARWTRAR 250


>tr|Q740J2|Q740J2_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 272

 Score =  211 bits (537), Expect = 6e-53
 Identities = 109/220 (49%), Positives = 128/220 (58%)

Query: 8   IFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWN 67
           I  IV RLARV+FTV Y A L ++S A+LMLGPQAH+ +++ ASTNLHNL+HG L TL  
Sbjct: 2   IGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLLG 61

Query: 68  SAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGW 127
           SA V+D GPLYFW                     VAF VGH               EFGW
Sbjct: 62  SALVVDAGPLYFWLPFLTCLLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFGW 121

Query: 128 LPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHA 187
           LPVSI   SDVGMSY            I  RWR AW+               DFTD+GH 
Sbjct: 122 LPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGWWVAAGIASAIVGGDFTDAGHT 181

Query: 188 VSLLLGMLVTARFRHPIRWTPARYALLMVSSGFGFLLLAH 227
           V+++LG+LV+ARFR PI WTPARY +L  SSGFGFL+LAH
Sbjct: 182 VAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAH 221


>tr|A0QHB7|A0QHB7_MYCA1 Tax_Id=243243 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51
 Identities = 105/214 (49%), Positives = 125/214 (58%)

Query: 14  RLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVID 73
           RLARV+FTV Y A L ++S A+L+LGPQAH+ +++ ASTNLHNL+HG L TL  SA V+D
Sbjct: 3   RLARVQFTVGYAALLLAISCAILVLGPQAHDVIVQRASTNLHNLSHGHLGTLLGSALVVD 62

Query: 74  EGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIA 133
            GPLYFW                     VAF VGH               EFGWLPVSI 
Sbjct: 63  AGPLYFWLPFLTCLLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFGWLPVSIT 122

Query: 134 HVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLG 193
             SDVGMSY            I  RWR AW+               DFTD+GH V+++LG
Sbjct: 123 RASDVGMSYGALAVLGAMTAVIPARWRAAWVGWWVAAGIASAIVGGDFTDAGHTVAVILG 182

Query: 194 MLVTARFRHPIRWTPARYALLMVSSGFGFLLLAH 227
           +LV+ARFR PI WTPARY +L  SSGFGFL+LAH
Sbjct: 183 VLVSARFRQPIHWTPARYLMLAASSGFGFLMLAH 216


>tr|A0Q9R4|A0Q9R4_MYCA1 Tax_Id=243243 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium avium]
          Length = 351

 Score =  125 bits (314), Expect = 5e-27
 Identities = 77/209 (36%), Positives = 94/209 (44%), Gaps = 1/209 (0%)

Query: 18  VRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPL 77
           VR T +Y AAL  V + +  LGP A +  +   STN+HNL  G+L TL  SAFV D G L
Sbjct: 102 VRVTAAYAAALLVVYLVLAALGPHARQVAVSRMSTNVHNLGRGQLGTLIGSAFVDDGGQL 161

Query: 78  YFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSD 137
           +FW                     V F VGH               E G LP S+A  SD
Sbjct: 162 FFWLPGLVCLLALGELLWRGKGLLVTFAVGHIGATMIVAVGLVAAIESGMLPASVARASD 221

Query: 138 VGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGMLVT 197
           VG+SY            +  RWR  W                DFT  GH V+LLLG+ ++
Sbjct: 222 VGISYGAMCVLGAITAALPVRWRGVW-AGWWLGTAVVATVGADFTAVGHVVALLLGIGLS 280

Query: 198 ARFRHPIRWTPARYALLMVSSGFGFLLLA 226
            R R    WTP   ALL V + FG+LLLA
Sbjct: 281 FRLRSTASWTPVHLALLCVGATFGYLLLA 309


>tr|Q744K4|Q744K4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 331

 Score =  125 bits (313), Expect = 6e-27
 Identities = 77/209 (36%), Positives = 94/209 (44%), Gaps = 1/209 (0%)

Query: 18  VRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPL 77
           VR T +Y AAL  V + +  LGP A +  +   STN+HNL  G+L TL  SAFV D G L
Sbjct: 97  VRVTAAYAAALLVVYLVLAALGPHARQVAVSRMSTNVHNLGRGQLGTLIGSAFVDDGGEL 156

Query: 78  YFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSD 137
           +FW                     V F VGH               E G LP S+A  SD
Sbjct: 157 FFWLPGLVCLLALGELLWRGKGLLVTFAVGHIGATMIVAVGLVAAIESGMLPASVARASD 216

Query: 138 VGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGMLVT 197
           VG+SY            +  RWR  W                DFT  GH V+LLLG+ ++
Sbjct: 217 VGISYGAMCVLGAITAAMPVRWRGVW-AGWWLGTAVVATVGADFTAVGHVVALLLGIGLS 275

Query: 198 ARFRHPIRWTPARYALLMVSSGFGFLLLA 226
            R R    WTP   ALL V + FG+LLLA
Sbjct: 276 FRLRSTASWTPVHLALLCVGATFGYLLLA 304


>tr|B1MAZ1|B1MAZ1_MYCA9 Tax_Id=561007 SubName: Full=Conserved
           hypothetical transmembrane protein;[Mycobacterium
           abscessus]
          Length = 256

 Score =  120 bits (300), Expect = 2e-25
 Identities = 73/214 (34%), Positives = 95/214 (44%), Gaps = 3/214 (1%)

Query: 15  LARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDE 74
           L R+R T+ Y  AL +V++ +++ GP+  +RV+ HASTNLHNL  G L TL  SAFV D 
Sbjct: 8   LVRLRVTIGYAVALVAVAVVLVIEGPRMQDRVVAHASTNLHNLHQGHLGTLIGSAFVTDA 67

Query: 75  GPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAH 134
           GP+Y W                     + F +GH                  W PVSIA 
Sbjct: 68  GPIYLWLPGLMSILALAELQWRSGRLALTFVLGHIGATLIVGLGLAFAVWLHWAPVSIAR 127

Query: 135 VSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGM 194
            SDVGMSY            I  RWR +W                 FT+ GH  +LLLGM
Sbjct: 128 ASDVGMSYGTAAVLGALTFSIPPRWRTSWGWGWITIGLVAIVCNQTFTEVGHLTALLLGM 187

Query: 195 LVTARF--RHPIRWTPARYALLMVSSGFGFLLLA 226
           L  AR    +   W+  R +LL     F  +L +
Sbjct: 188 L-GARLTPSYAPHWSALRLSLLACGCLFALMLFS 220


>tr|B5GRJ3|B5GRJ3_STRCL Tax_Id=443255 SubName: Full=Putative
           uncharacterized protein;[Streptomyces clavuligerus ATCC
           27064]
          Length = 245

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 50/208 (24%), Positives = 71/208 (34%), Gaps = 2/208 (0%)

Query: 4   AIQWIFAIVCRLAR-VRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRL 62
           AI+  FA V    R    T  +LA L   ++ M  + P+  E  +R  STN+  L+   +
Sbjct: 26  AIRTAFARVLAYVRGAPGTYIWLAILFVTTVLMHHMSPEFEEDFLRRRSTNIQQLSTDPV 85

Query: 63  ATLWNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXX 122
             L +SA  ID G   F+                         + H              
Sbjct: 86  RVLISSALWIDGGSWLFYAVLYTVFHASAEHWLGTLRWLTVAVLAHVLATFISEGALLWA 145

Query: 123 XEFGWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFT 182
              G  P S  H  D+G+SY            I+  WR  ++                FT
Sbjct: 146 IRHGLAPESAMHTLDIGVSYALAGVVAVLTYRIASPWRYVYLAGVLLVYGLPLVSGRTFT 205

Query: 183 DSGHAVSLLLGMLVTARFRH-PIRWTPA 209
           D GH  S+L+G+      RH    W PA
Sbjct: 206 DLGHFTSVLIGLACYPLTRHRGPAWNPA 233


>tr|Q0RYN5|Q0RYN5_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 233

 Score = 49.3 bits (116), Expect = 4e-04
 Identities = 44/189 (23%), Positives = 63/189 (33%), Gaps = 1/189 (0%)

Query: 21  TVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPLYFW 80
           T  +LA L   S+ M  L P+   RV+   STNLH+LA   +  L +SAF +  G    +
Sbjct: 31  TYIWLAILLVTSVVMRNLPPEVLARVLGDRSTNLHHLAEDPVRVLISSAFWLAGGGWITY 90

Query: 81  XXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGM 140
                                    + H                 G  P S     D+G+
Sbjct: 91  FISFNIFHVPAERWLGTLRWLGVVVIAHVGATYISEGALYWAIRHGHAPASAVDTLDIGV 150

Query: 141 SYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGMLVTARF 200
           SY            I+  WR  ++               +FT  GH  + LLG+      
Sbjct: 151 SYGLAGVIAVLTYRIAPPWRYLYVTAVLAFFAVPLFVDLNFTAIGHFTAALLGLGCYPLV 210

Query: 201 R-HPIRWTP 208
           R H   W+P
Sbjct: 211 RSHRSTWSP 219


>tr|B5HLN3|B5HLN3_9ACTO Tax_Id=463191 SubName: Full=Putative
           uncharacterized protein;[Streptomyces sviceus ATCC
           29083]
          Length = 232

 Score = 48.5 bits (114), Expect = 7e-04
 Identities = 39/173 (22%), Positives = 55/173 (31%)

Query: 21  TVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPLYFW 80
           T  +LA L   ++A+  + P+  E  +R  STN+H L+   L  L +SA  ID G    +
Sbjct: 35  TYVWLAVLFVTTVALHHMSPEFEEEFLRQRSTNIHELSSNPLRVLVSSAMWIDSGHWLPY 94

Query: 81  XXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGM 140
                                      H                 G  P S  +  D+G+
Sbjct: 95  VVLYSLFHAPAERWLGTARWLAVCAAAHVLATLISEGALLWGIRHGMAPASAVNTLDIGV 154

Query: 141 SYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLG 193
           SY            I   WR  +                 FTD GH  S L+G
Sbjct: 155 SYALAGVVGVLVYRIPAPWRYVYGFVVLVVYAVPLVTGRTFTDLGHFTSALIG 207


>tr|B4V9R2|B4V9R2_9ACTO Tax_Id=465541 SubName: Full=Putative
           uncharacterized protein;[Streptomyces sp. Mg1]
          Length = 215

 Score = 48.1 bits (113), Expect = 0.001
 Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 1/188 (0%)

Query: 24  YLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDE-GPLYFWXX 82
           +L  +A  S+ +++   Q    ++   S+NLH L    + +L +SAF I+    L  +  
Sbjct: 26  WLLIIALTSVIVVIAPDQLDHVLLHRNSSNLHELTRHPIRSLISSAFWIENPASLALYAV 85

Query: 83  XXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGMSY 142
                              V     H                    P S+ HV D+G+SY
Sbjct: 86  LFEFFHAPVERWLGTLRWFVIVATAHITATLVSQRVVLSAIRDHRAPRSMVHVVDIGVSY 145

Query: 143 XXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGMLVTARFRH 202
                       +   WR  ++               +FTD GHA++L +G+L     RH
Sbjct: 146 GLAAAIGVLTYRLPHPWRWFYLAGVVAFFGIPLLTGANFTDLGHAIALAVGLLAWPLTRH 205

Query: 203 PIRWTPAR 210
           P   T +R
Sbjct: 206 PQPTTVSR 213


>tr|Q0SC01|Q0SC01_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 228

 Score = 47.4 bits (111), Expect = 0.002
 Identities = 44/189 (23%), Positives = 62/189 (32%), Gaps = 1/189 (0%)

Query: 21  TVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPLYFW 80
           T  +LA L   S+ M  L P    RV+   STNLH+LA   +  L +SAF +  G    +
Sbjct: 26  TYIWLAILLVTSVVMKNLLPDDLARVLGDRSTNLHHLAEDPVRVLISSAFWLAGGGWITY 85

Query: 81  XXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGM 140
                                    + H                 G  P S     D+G+
Sbjct: 86  FISFNIFHVPAERWLGTLRWLCVVVIAHVGATYISEGVLYWAIRHGHAPASAVDTLDIGV 145

Query: 141 SYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGMLVTARF 200
           SY            I+  WR  ++               +FT  GH  + LLG+      
Sbjct: 146 SYGLAGVIAVLTYRIASPWRYLYVAAVLAFFAVPLFIDLNFTAIGHFTAALLGLGCYPLV 205

Query: 201 R-HPIRWTP 208
           R H   W+P
Sbjct: 206 RSHRGTWSP 214


>tr|C3JM40|C3JM40_RHOER Tax_Id=596309 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus erythropolis SK121]
          Length = 219

 Score = 46.6 bits (109), Expect = 0.003
 Identities = 39/174 (22%), Positives = 60/174 (34%)

Query: 21  TVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPLYFW 80
           T  +L AL   ++ +  L     ER +   STNLH+LA   L  L++SAF ++ G    +
Sbjct: 18  TYVWLLALLFTTLFLRHLPDNVEERFLGKRSTNLHHLAEDPLRVLFSSAFWLEGGGWLGY 77

Query: 81  XXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGM 140
                                    + H                 G++  S  +  DVG+
Sbjct: 78  LVLFTIFHATAERWLGTWRWLCVVVIAHVGATYISEGVLYEGIRHGYVAESAVNTLDVGV 137

Query: 141 SYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGM 194
           SY            I   WR  ++               +FT  GH  +LLLG+
Sbjct: 138 SYGLAGVMGILVYRIVDPWRYVYLAGLLLFYGVPLIFATNFTAIGHMSALLLGL 191


>tr|C0ZY90|C0ZY90_RHOE4 Tax_Id=234621 SubName: Full=Conserved
           hypothetical membrane protein;[Rhodococcus erythropolis]
          Length = 221

 Score = 46.2 bits (108), Expect = 0.004
 Identities = 39/174 (22%), Positives = 60/174 (34%)

Query: 21  TVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVIDEGPLYFW 80
           T  +L AL   ++ +  L     ER +   STNLH+LA   L  L++SAF ++ G    +
Sbjct: 20  TYVWLLALLFTTLFLRHLPDNVEERFLGKRSTNLHHLAEDPLRVLFSSAFWLEGGGWLGY 79

Query: 81  XXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIAHVSDVGM 140
                                    + H                 G++  S  +  DVG+
Sbjct: 80  LVLFTIFHATAERWLGTWRWLCVVVIAHVGATYISEGVLYEGIRHGYVAESAVNTLDVGV 139

Query: 141 SYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLGM 194
           SY            I   WR  ++               +FT  GH  +LLLG+
Sbjct: 140 SYGLAGIMGILVYRIVDPWRFVYLAGLLLFYGVPLIFATNFTAIGHMSALLLGL 193


>tr|Q7TWI5|Q7TWI5_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE CONSERVED
           TRANSMEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 237

 Score = 41.2 bits (95), Expect = 0.11
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TTVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|O06251|O06251_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE CONSERVED
           TRANSMEMBRANE PROTEIN; SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|C6DLV5|C6DLV5_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|C1AHP3|C1AHP3_MYCBT Tax_Id=561275 SubName: Full=Putative
           transmembrane protein;[Mycobacterium bovis]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|A5U8B0|A5U8B0_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved transmembrane protein;[Mycobacterium
           tuberculosis]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|A1KPC1|A1KPC1_MYCBP Tax_Id=410289 SubName: Full=Possible
           conserved transmembrane protein;[Mycobacterium bovis]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|A4KLW1|A4KLW1_MYCTU Tax_Id=395095 SubName: Full=Conserved
           transmembrane protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|A2VPL6|A2VPL6_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.15
 Identities = 49/220 (22%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 7   WIFAIVCRLARVRFTVSYLAALASVSIAMLML-GPQAHERVIRHASTNLHNLAHGRLATL 65
           W  A+   ++    T ++L  L   +I    L G Q H  V+ H STN+  L    L  L
Sbjct: 13  WALAVWHFVSNAPLTYAWLVVLVITTIIQNNLTGSQLHF-VLLHRSTNIAELGRDPLEVL 71

Query: 66  WNSAFVIDEGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEF 125
           ++S   ID   L  +                           H               + 
Sbjct: 72  FSSLLWIDGRNLEPYLLLFTLFLAPAEHWLGHLRWLTVGLTAHIGATYLSEGLLYLAIQH 131

Query: 126 GWLPVSIAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DF 181
                 + H  D+G+SY            I++ WR  ++                   DF
Sbjct: 132 RDASERMVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDF 191

Query: 182 TDSGHAVSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
           T  GH  S+L+G+L    AR R    W PAR   L+   G
Sbjct: 192 TAVGHFASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 231


>tr|B2GH12|B2GH12_KOCRD Tax_Id=378753 SubName: Full=Hypothetical
           membrane protein;[Kocuria rhizophila]
          Length = 249

 Score = 38.1 bits (87), Expect = 0.97
 Identities = 36/182 (19%), Positives = 51/182 (28%)

Query: 14  RLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHASTNLHNLAHGRLATLWNSAFVID 73
           R+     T  YL  L   +  +        +  +   STNLH L+   +  L  SA  + 
Sbjct: 41  RVRHAPLTYLYLVLLTFTTWLLANTSEPLRKAFLAEQSTNLHELSTNPVTVLVRSAMYVS 100

Query: 74  EGPLYFWXXXXXXXXXXXXXXXXXXXXXVAFFVGHXXXXXXXXXXXXXXXEFGWLPVSIA 133
              L  W                       F +GH                   LPV   
Sbjct: 101 PAELLIWWVGFSLVVAPMERRFGWQRVLAGFVLGHVGATVAVAYLQVWLFRTAELPVPSP 160

Query: 134 HVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXXDFTDSGHAVSLLLG 193
            + DVG SY               R R  W                D++  GH V+ +LG
Sbjct: 161 VLIDVGASYGFCALAALATYRGPLRRRLLWAGGLVGLLAAGLLLDLDWSSIGHCVAAVLG 220

Query: 194 ML 195
            +
Sbjct: 221 FV 222


>tr|A5WT07|A5WT07_MYCTF Tax_Id=336982 SubName: Full=Conserved
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 162

 Score = 35.8 bits (81), Expect = 4.8
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 132 IAHVSDVGMSYXXXXXXXXXXXXISRRWRPAWIXXXXXXXXXXXXXXX----DFTDSGHA 187
           + H  D+G+SY            I++ WR  ++                   DFT  GH 
Sbjct: 63  MVHARDIGVSYFLVGVMAVLTYHIAKPWRWGYLGVLLVIFGFPLIAMDKAELDFTAVGHF 122

Query: 188 VSLLLGMLV--TARFRHPIRWTPARYALLMVSSG 219
            S+L+G+L    AR R    W PAR   L+   G
Sbjct: 123 ASILIGLLFYPMARERDGRLWNPARIKSLLHRRG 156


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.331    0.138    0.469 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,219,030,767
Number of extensions: 31595212
Number of successful extensions: 72547
Number of sequences better than 10.0: 33
Number of HSP's gapped: 72628
Number of HSP's successfully gapped: 33
Length of query: 260
Length of database: 3,846,993,858
Length adjustment: 135
Effective length of query: 125
Effective length of database: 2,324,841,453
Effective search space: 290605181625
Effective search space used: 290605181625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 79 (35.0 bits)