BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2506 (313 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integra... 522 e-146 tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integra... 519 e-145 tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 477 e-133 tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosin... 477 e-133 sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine re... 475 e-132 sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine re... 475 e-132 tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[My... 475 e-132 tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-sp... 475 e-132 tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosin... 475 e-132 tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable inte... 475 e-132 tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 475 e-132 tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 475 e-132 tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 475 e-132 sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine re... 463 e-128 tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/rec... 463 e-128 tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine reco... 459 e-127 tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine reco... 459 e-127 tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine reco... 457 e-127 tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine reco... 452 e-125 tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosin... 451 e-125 tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine reco... 441 e-122 tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine reco... 404 e-111 tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine reco... 389 e-106 tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosin... 376 e-102 tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosin... 374 e-101 tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative... 349 3e-94 tr|C2AQV6|C2AQV6_TSUPA Tax_Id=521096 SubName: Full=Tyrosine reco... 347 1e-93 tr|D0L944|D0L944_GORB4 Tax_Id=526226 SubName: Full=Tyrosine reco... 332 5e-89 tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine reco... 330 1e-88 tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integra... 328 5e-88 tr|C0TZK1|C0TZK1_9ACTO Tax_Id=526225 SubName: Full=Tyrosine reco... 320 2e-85 tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine reco... 319 3e-85 tr|C1WQW3|C1WQW3_9ACTO Tax_Id=479435 SubName: Full=Tyrosine reco... 313 1e-83 tr|Q47QN0|Q47QN0_THEFY Tax_Id=269800 SubName: Full=Tyrosine reco... 312 4e-83 tr|C1RJR5|C1RJR5_9CELL Tax_Id=446466 SubName: Full=Tyrosine reco... 308 7e-82 tr|A4X686|A4X686_SALTO Tax_Id=369723 SubName: Full=Tyrosine reco... 306 2e-81 tr|A8LYT7|A8LYT7_SALAI Tax_Id=391037 SubName: Full=Tyrosine reco... 304 8e-81 tr|A1SJK8|A1SJK8_NOCSJ Tax_Id=196162 SubName: Full=Tyrosine reco... 304 8e-81 tr|C8XHP9|C8XHP9_NAKMY Tax_Id=479431 SubName: Full=Tyrosine reco... 303 2e-80 tr|C4RHX9|C4RHX9_9ACTO Tax_Id=219305 SubName: Full=Tyrosine reco... 301 7e-80 tr|A3TKV3|A3TKV3_9MICO Tax_Id=313589 SubName: Full=Tyrosine reco... 300 1e-79 tr|A0LUA3|A0LUA3_ACIC1 Tax_Id=351607 SubName: Full=Tyrosine reco... 299 2e-79 tr|A0JV45|A0JV45_ARTS2 Tax_Id=290399 SubName: Full=Tyrosine reco... 299 3e-79 tr|B8HGE6|B8HGE6_ARTCA Tax_Id=452863 SubName: Full=Tyrosine reco... 295 6e-78 tr|A1R5A8|A1R5A8_ARTAT Tax_Id=290340 (xerD)SubName: Full=Tyrosin... 294 1e-77 tr|C0W3E4|C0W3E4_9ACTO Tax_Id=525246 SubName: Full=Tyrosine reco... 290 2e-76 tr|D1BS98|D1BS98_9MICO Tax_Id=446471 SubName: Full=Tyrosine reco... 289 3e-76 tr|A9WQJ1|A9WQJ1_RENSM Tax_Id=288705 SubName: Full=Integrase/rec... 284 8e-75 tr|A8LE61|A8LE61_FRASN Tax_Id=298653 SubName: Full=Integrase fam... 283 2e-74 tr|C5CAL4|C5CAL4_MICLC Tax_Id=465515 SubName: Full=Tyrosine reco... 281 7e-74 >tr|B2HR71|B2HR71_MYCMM Tax_Id=216594 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium marinum] Length = 313 Score = 522 bits (1344), Expect = e-146 Identities = 274/313 (87%), Positives = 275/313 (87%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 +STLTLDTQLQGYLDHLAIERGVAANT KHLEDRGITDLAKVGEDDVSE Sbjct: 1 MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLTIDEVLALLEGAGGDNPADGP YSTGSRISEAVGLDVDDIDTQART Sbjct: 121 KSLTIDEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA Sbjct: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 Query: 301 LREVWAGAHPRAT 313 LREVWAGAHPRAT Sbjct: 301 LREVWAGAHPRAT 313 >tr|A0PPB0|A0PPB0_MYCUA Tax_Id=362242 (xerD)SubName: Full=Integrase/recombinase, XerD;[Mycobacterium ulcerans] Length = 313 Score = 519 bits (1337), Expect = e-145 Identities = 273/313 (87%), Positives = 274/313 (87%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 +STLTLDTQLQGYLDHLAIERGVAANT KHLEDRGITDLAKVGEDDVSE Sbjct: 1 MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFAAAEGLAALDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLTIDEVLALLEGAGGDNPADGP YSTGSRISEAVGLDVDDIDTQART Sbjct: 121 KSLTIDEVLALLEGAGGDNPADGPLTLRNRALLELLYSTGSRISEAVGLDVDDIDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 VLQDAAERA ITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA Sbjct: 241 VLQDAAERADITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 Query: 301 LREVWAGAHPRAT 313 LREVWAGAHPRAT Sbjct: 301 LREVWAGAHPRAT 313 >tr|Q740E3|Q740E3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 313 Score = 477 bits (1228), Expect = e-133 Identities = 247/312 (79%), Positives = 263/312 (84%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 ++T+ L+TQLQGYLDHL IERGVAANT KHL DRGI+DLAKVGEDDVSE Sbjct: 1 MTTVALETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSE 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDP++G LSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLTID+VLALLE AGG++PADGP YSTG+RISEAVGLDVDD+DTQAR+ Sbjct: 121 KSLTIDQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARS 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR ELARRGRGTPAIFLN RGGRLSRQSAWQ Sbjct: 181 VLLRGKGGKQRLVPIGRPAVAALDAYLVRGRWELARRGRGTPAIFLNVRGGRLSRQSAWQ 240 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYT+VTVHA Sbjct: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVHA 300 Query: 301 LREVWAGAHPRA 312 LREVWA AHPRA Sbjct: 301 LREVWAEAHPRA 312 >tr|A0QH66|A0QH66_MYCA1 Tax_Id=243243 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium avium] Length = 313 Score = 477 bits (1228), Expect = e-133 Identities = 246/312 (78%), Positives = 263/312 (84%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 ++T+ L+TQLQGYLDHL IERGVAANT KHL DRGI+DLAKVGEDDVS+ Sbjct: 1 MTTVALETQLQGYLDHLTIERGVAANTLSSYRRDLRRYTKHLSDRGISDLAKVGEDDVSD 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDP++G LSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPDTGAAALSAVSAARALIAVRGLHRFLAAEGLAELDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLTID+VLALLE AGG++PADGP YSTG+RISEAVGLDVDD+DTQAR+ Sbjct: 121 KSLTIDQVLALLEAAGGESPADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARS 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 VLL+GKGGKQRLVP+GRPAV ALDAYLVRGR ELARRGRGTPAIFLN RGGRLSRQSAWQ Sbjct: 181 VLLRGKGGKQRLVPIGRPAVAALDAYLVRGRSELARRGRGTPAIFLNVRGGRLSRQSAWQ 240 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYT+VTVHA Sbjct: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVHA 300 Query: 301 LREVWAGAHPRA 312 LREVWA AHPRA Sbjct: 301 LREVWAEAHPRA 312 >sp|P67636|XERD_MYCTU Tax_Id=1773 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >sp|P67637|XERD_MYCBO Tax_Id=1765 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|C6DRX2|C6DRX2_MYCTK Tax_Id=478434 SubName: Full=Integrase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|C1ANX3|C1ANX3_MYCBT Tax_Id=561275 (xerD)SubName: Full=Site-specific tyrosine recombinase;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|A5U359|A5U359_MYCTA Tax_Id=419947 (xerD)SubName: Full=Tyrosine recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|A1KJB7|A1KJB7_MYCBP Tax_Id=410289 SubName: Full=Probable integrase/recombinase;[Mycobacterium bovis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|A5WN20|A5WN20_MYCTF Tax_Id=336982 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|A4KHL4|A4KHL4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical integrase/recombinase;[Mycobacterium tuberculosis str. Haarlem] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >tr|A2VII4|A2VII4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 311 Score = 475 bits (1222), Expect = e-132 Identities = 248/308 (80%), Positives = 258/308 (83%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 TL QLQGYLDHL IERGVAANT KHLE+RGITDLAKVGE DVSEFLVA Sbjct: 3 TLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLVA 62 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LRRGDP+SG LSAVSAARALIAVRGLHRF VRPPTP RRLPKSLT Sbjct: 63 LRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSLT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 IDEVL+LLEGAGGD P+DGP YSTG+RISEAVGLD+DDIDT AR+VLL+ Sbjct: 123 IDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLLR 182 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGGKQRLVPVGRPAV ALDAYLVRGRP+LARRGRGT AIFLNARGGRLSRQSAWQVLQD Sbjct: 183 GKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQD 242 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERAGIT+GVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV Sbjct: 243 AAERAGITAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 302 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 303 WAGAHPRA 310 >sp|Q49890|XERD_MYCLE Tax_Id=1769 (xerD)RecName: Full=Tyrosine recombinase xerD;[Mycobacterium leprae] Length = 316 Score = 463 bits (1192), Expect = e-128 Identities = 245/315 (77%), Positives = 257/315 (81%), Gaps = 3/315 (0%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 ++T L TQLQGYLD+L IER +AANT KHL DRGI DLAKVGE DVSE Sbjct: 1 MTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDP+SGV LSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLT+DEVLALLE GG++ ADGP YSTGSRISEAVGLDVDD+DTQART Sbjct: 121 KSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGRLSRQS 237 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGR +LARRG G TPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 Query: 238 AWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVT 297 AWQVLQDAAE AGITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVT Sbjct: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 Query: 298 VHALREVWAGAHPRA 312 V ALREVWAGAHPRA Sbjct: 301 VQALREVWAGAHPRA 315 >tr|B8ZRH7|B8ZRH7_MYCLB Tax_Id=561304 SubName: Full=Integrase/recombinase;[Mycobacterium leprae] Length = 316 Score = 463 bits (1192), Expect = e-128 Identities = 245/315 (77%), Positives = 257/315 (81%), Gaps = 3/315 (0%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 ++T L TQLQGYLD+L IER +AANT KHL DRGI DLAKVGE DVSE Sbjct: 1 MTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDLAKVGEHDVSE 60 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLVALRRGDP+SGV LSAVSAARALIAVRGLHRF VRPPTPGRRLP Sbjct: 61 FLVALRRGDPDSGVAALSAVSAARALIAVRGLHRFAVAEGLVDLDVARAVRPPTPGRRLP 120 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSLT+DEVLALLE GG++ ADGP YSTGSRISEAVGLDVDD+DTQART Sbjct: 121 KSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQART 180 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGRLSRQS 237 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGR +LARRG G TPAIFLNARGGRLSRQS Sbjct: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQS 240 Query: 238 AWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVT 297 AWQVLQDAAE AGITSGVSPHMLRHSFATHLLEGGAD+RVVQEL+GHASVTTTQIYTLVT Sbjct: 241 AWQVLQDAAEHAGITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLVT 300 Query: 298 VHALREVWAGAHPRA 312 V ALREVWAGAHPRA Sbjct: 301 VQALREVWAGAHPRA 315 >tr|Q1B7T5|Q1B7T5_MYCSS Tax_Id=164756 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 459 bits (1180), Expect = e-127 Identities = 236/307 (76%), Positives = 254/307 (82%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD QLQGYLDHL IERGVAANT +HL RG+ DLAKV E DVS+FLVAL Sbjct: 11 LDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSDFLVAL 70 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 RRGDP++G LSAVSAARALIAVRGLHRF V+PPTPGRRLPKSL+I Sbjct: 71 RRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLPKSLSI 130 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 DEVLALL+GAGGD+ ADGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 131 DEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARSVLLRG 190 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQDA Sbjct: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 250 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 AERAGITS VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVHALREVW Sbjct: 251 AERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHALREVW 310 Query: 306 AGAHPRA 312 AGAHPRA Sbjct: 311 AGAHPRA 317 >tr|A1UH72|A1UH72_MYCSK Tax_Id=189918 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 459 bits (1180), Expect = e-127 Identities = 236/307 (76%), Positives = 254/307 (82%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD QLQGYLDHL IERGVAANT +HL RG+ DLAKV E DVS+FLVAL Sbjct: 11 LDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSDFLVAL 70 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 RRGDP++G LSAVSAARALIAVRGLHRF V+PPTPGRRLPKSL+I Sbjct: 71 RRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLPKSLSI 130 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 DEVLALL+GAGGD+ ADGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 131 DEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARSVLLRG 190 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQDA Sbjct: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 250 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 AERAGITS VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVHALREVW Sbjct: 251 AERAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHALREVW 310 Query: 306 AGAHPRA 312 AGAHPRA Sbjct: 311 AGAHPRA 317 >tr|A3Q0Q9|A3Q0Q9_MYCSJ Tax_Id=164757 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium sp.] Length = 318 Score = 457 bits (1177), Expect = e-127 Identities = 235/307 (76%), Positives = 254/307 (82%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD QLQGYLDHL IERGVAANT +HL RG+ DLAKV E DVS+FLVAL Sbjct: 11 LDDQLQGYLDHLTIERGVAANTLSSYRRDLRRYSEHLTGRGVEDLAKVTESDVSDFLVAL 70 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 RRGDP++G LSAVSAARALIAVRGLHRF V+PPTPGRRLPKSL+I Sbjct: 71 RRGDPDTGAQALSAVSAARALIAVRGLHRFATAEGLTDVDVARAVKPPTPGRRLPKSLSI 130 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 DEVLALL+GAGGD+ ADGP YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 131 DEVLALLDGAGGDSEADGPLTLRNRALLELLYSTGARISEAVGLDIDDVDTHARSVLLRG 190 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQDA Sbjct: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 250 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 A+RAGITS VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVHALREVW Sbjct: 251 ADRAGITSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHALREVW 310 Query: 306 AGAHPRA 312 AGAHPRA Sbjct: 311 AGAHPRA 317 >tr|A1TA79|A1TA79_MYCVP Tax_Id=350058 SubName: Full=Tyrosine recombinase XerD subunit;[Mycobacterium vanbaalenii] Length = 317 Score = 452 bits (1163), Expect = e-125 Identities = 234/312 (75%), Positives = 255/312 (81%) Query: 1 VSTLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSE 60 V LD Q QGYLDHLAIERGVAANT +HL RG+TDLA V E DVSE Sbjct: 5 VDPAALDDQFQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLASRGVTDLAGVAEADVSE 64 Query: 61 FLVALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLP 120 FLV+LRRGDP++GV+ LSAVSAARA+IAVRGLHRF V+PPTPGRRLP Sbjct: 65 FLVSLRRGDPDNGVVPLSAVSAARAVIAVRGLHRFAAAEGITTVDVAREVKPPTPGRRLP 124 Query: 121 KSLTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART 180 KSL+IDEVLALLE AGGD ADGP YSTG+RISEAVGLDVDD+DT+AR+ Sbjct: 125 KSLSIDEVLALLEAAGGDGEADGPLTLRNRALLELLYSTGARISEAVGLDVDDVDTEARS 184 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 VLL+GKGGKQRL+P+GRPAV ALD YLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQ Sbjct: 185 VLLRGKGGKQRLIPIGRPAVSALDNYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQ 244 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 VLQDAAERAGIT+ VSPH+LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTV A Sbjct: 245 VLQDAAERAGITATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVTA 304 Query: 301 LREVWAGAHPRA 312 LREVWAGAHPRA Sbjct: 305 LREVWAGAHPRA 316 >tr|A0QYQ5|A0QYQ5_MYCS2 Tax_Id=246196 (xerD)SubName: Full=Tyrosine recombinase XerD;[Mycobacterium smegmatis] Length = 318 Score = 451 bits (1160), Expect = e-125 Identities = 231/307 (75%), Positives = 250/307 (81%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD Q+QGYLDHL IERGVAANT +HL RGI DLA+V E DVS+FLVAL Sbjct: 11 LDEQVQGYLDHLTIERGVAANTLSSYRRDLRRYAEHLRQRGIDDLARVAESDVSDFLVAL 70 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 RRGDP++GV LSAVSAARA++AVRGLHRF V+PPTP RRLPKSLT+ Sbjct: 71 RRGDPDAGVTALSAVSAARAVVAVRGLHRFAAAEGLTENDVARAVKPPTPSRRLPKSLTL 130 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 DEVLALLE AGGD+ AD P YSTG+RISEAVGLDVDD+DTQAR+VLL G Sbjct: 131 DEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDVDDVDTQARSVLLHG 190 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQRLVP+GRPAV ALDAYLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQD+ Sbjct: 191 KGGKQRLVPIGRPAVSALDAYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDS 250 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 AERAGI S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTVH LREVW Sbjct: 251 AERAGIASAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVHTLREVW 310 Query: 306 AGAHPRA 312 AGAHPRA Sbjct: 311 AGAHPRA 317 >tr|A4T9Z2|A4T9Z2_MYCGI Tax_Id=350054 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium gilvum] Length = 314 Score = 441 bits (1133), Expect = e-122 Identities = 228/307 (74%), Positives = 251/307 (81%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD QLQGYLDHLAIERGVAANT +HL+ RG+ DLA V E DVSEFLVAL Sbjct: 7 LDGQLQGYLDHLAIERGVAANTLSSYRRDLRRYAEHLKARGVGDLAAVTETDVSEFLVAL 66 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R GDP+ GV+ LSAVSAARALIAVRGLHRF V+PPTP RRLPKSL+I Sbjct: 67 RLGDPDGGVVPLSAVSAARALIAVRGLHRFAAAEGIAAIDVARDVKPPTPSRRLPKSLSI 126 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 DEVLALLE AGGD+ AD P YSTG+RISEAVGLD+DD+DT AR+VLL+G Sbjct: 127 DEVLALLEAAGGDSEADSPLTLRNRALLELLYSTGARISEAVGLDIDDVDTSARSVLLRG 186 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQRL+P+GRPAV AL+ YLVRGRP+LARRGRGTPAIFLNARGGRLSRQSAWQVLQDA Sbjct: 187 KGGKQRLIPIGRPAVTALETYLVRGRPDLARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 246 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 A RAG+T+ VSPH+LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYT+VTV+ALREVW Sbjct: 247 AGRAGVTATVSPHVLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTMVTVNALREVW 306 Query: 306 AGAHPRA 312 AGAHPRA Sbjct: 307 AGAHPRA 313 >tr|B1MB26|B1MB26_MYCA9 Tax_Id=561007 SubName: Full=Tyrosine recombinase XerD;[Mycobacterium abscessus] Length = 315 Score = 404 bits (1037), Expect = e-111 Identities = 217/308 (70%), Positives = 239/308 (77%), Gaps = 2/308 (0%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD ++Q YLDHL +ERGVAANT +HL DR I LA+V E DVS+F+V L Sbjct: 8 LDGEIQSYLDHLDVERGVAANTLSSYRRDLRRYQQHLADRKIDRLAEVCETDVSDFVVTL 67 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 RRGDP +GV LSA SAARALIAVRGLHRF V+PPTP RRLPKSLT+ Sbjct: 68 RRGDPANGVPELSASSAARALIAVRGLHRFAAIEGLAPTDVARAVKPPTPNRRLPKSLTV 127 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 ++V ALL AGG +DGP YSTG+RISEAVGLDVDD+D QAR+VLL G Sbjct: 128 EQVEALLNAAGGGG-SDGPLDLRNRALLELLYSTGARISEAVGLDVDDVDVQARSVLLWG 186 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRG-TPAIFLNARGGRLSRQSAWQVLQD 244 KGGKQRLVPVGRPAV+AL AYLVRGRP+LARRGRG PA+FLN+RGGRLSRQSAWQVL D Sbjct: 187 KGGKQRLVPVGRPAVEALQAYLVRGRPDLARRGRGGVPALFLNSRGGRLSRQSAWQVLAD 246 Query: 245 AAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREV 304 AAERA I++ VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTV ALREV Sbjct: 247 AAERAKISAAVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVSALREV 306 Query: 305 WAGAHPRA 312 WAGAHPRA Sbjct: 307 WAGAHPRA 314 >tr|Q0SI76|Q0SI76_RHOSR Tax_Id=101510 SubName: Full=Tyrosine recombinase;[Rhodococcus sp.] Length = 308 Score = 389 bits (998), Expect = e-106 Identities = 201/309 (65%), Positives = 233/309 (75%), Gaps = 2/309 (0%) Query: 4 LTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLV 63 + + Q+ YLDHLA+ERG A NT + L DR +TD+ ++ E DVS+F++ Sbjct: 1 MVIARQVDSYLDHLAVERGAARNTLGSYRRDLERYTQFLADRELTDIDRIREQDVSDFVI 60 Query: 64 ALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSL 123 ALR GDP + L+A SAARALIAVRG HRF VRPP+P +RLPKSL Sbjct: 61 ALRSGDPNRELPPLAASSAARALIAVRGFHRFAAAEGMTAVDVARDVRPPSPAKRLPKSL 120 Query: 124 TIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLL 183 ++EVLALLE GG PADGP YSTG+RISEAVGLDVDD+DT+ R+VLL Sbjct: 121 PVNEVLALLEAVGGSGPADGPRAVRDRALLELLYSTGARISEAVGLDVDDVDTETRSVLL 180 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQ 243 +GKGGKQR+VPVGRPAV++LDAYL+RGRP LA RGTPA+FLN RGGRLSRQSAW+VLQ Sbjct: 181 RGKGGKQRVVPVGRPAVESLDAYLIRGRPALA--SRGTPALFLNVRGGRLSRQSAWKVLQ 238 Query: 244 DAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALRE 303 AA+ AGI+S VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTLVTV ALRE Sbjct: 239 AAADAAGISSAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVGALRE 298 Query: 304 VWAGAHPRA 312 VWAGAHPRA Sbjct: 299 VWAGAHPRA 307 >tr|C1A033|C1A033_RHOE4 Tax_Id=234621 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis] Length = 307 Score = 376 bits (966), Expect = e-102 Identities = 196/307 (63%), Positives = 230/307 (74%), Gaps = 2/307 (0%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L Q+ YLDHLA+ERG A NT ++L+ RGI D+A V E+DV+EF+ L Sbjct: 2 LARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLDGRGIDDVAGVTENDVTEFVTHL 61 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R GD ++GVL L+A SAAR LIAVRG H+F V+PPTPGR+LPK+L + Sbjct: 62 RLGDKDAGVLPLAASSAARTLIAVRGFHKFSAAEGLVGVDVARTVKPPTPGRKLPKALPL 121 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 D+V+ALL+ +GG DGP YSTG+RI+EA+ LDVDDIDT+ R+VLL+G Sbjct: 122 DDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLKG 181 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQR+VPVGRPA+ A+DAYLVRGRP LA RG PA+FLNARGGRLSRQSAWQ+LQDA Sbjct: 182 KGGKQRIVPVGRPAIAAVDAYLVRGRPSLAT--RGVPALFLNARGGRLSRQSAWQILQDA 239 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 A AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTLVTV ALREVW Sbjct: 240 AASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTALREVW 299 Query: 306 AGAHPRA 312 A AHPRA Sbjct: 300 AQAHPRA 306 >tr|C3JWI6|C3JWI6_RHOER Tax_Id=596309 (xerD)SubName: Full=Tyrosine recombinase XerD;[Rhodococcus erythropolis SK121] Length = 307 Score = 374 bits (959), Expect = e-101 Identities = 194/307 (63%), Positives = 229/307 (74%), Gaps = 2/307 (0%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L Q+ YLDHLA+ERG A NT ++L RGI D+A V E+DV+EF+ L Sbjct: 2 LARQVDSYLDHLAVERGSARNTLLSYRRDLNRYAEYLNGRGIDDVAGVTENDVTEFVTHL 61 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R GD ++GV+ L+A SAAR LIAVRG H+F V+PPTPGR+LPK+L + Sbjct: 62 RLGDKDAGVVPLAASSAARTLIAVRGFHKFSAAEGLVSVDVARTVKPPTPGRKLPKALPL 121 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 D+V+ALL+ +GG DGP YSTG+RI+EA+ LDVDDIDT+ R+VLL+G Sbjct: 122 DDVIALLDASGGGAAGDGPRDLRDRALLELLYSTGARITEAIDLDVDDIDTETRSVLLKG 181 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQR+VPVGRPA+ A+DAYLVRGRP LA RG PA+FLNARGGRLSRQSAWQ+LQDA Sbjct: 182 KGGKQRIVPVGRPAIAAVDAYLVRGRPSLAT--RGVPALFLNARGGRLSRQSAWQILQDA 239 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 A AGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTLVTV A+REVW Sbjct: 240 AASAGIKADVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVTAMREVW 299 Query: 306 AGAHPRA 312 A AHPRA Sbjct: 300 AQAHPRA 306 >tr|Q5YY88|Q5YY88_NOCFA Tax_Id=37329 (xerD)SubName: Full=Putative recombinase;[Nocardia farcinica] Length = 316 Score = 349 bits (895), Expect = 3e-94 Identities = 195/316 (61%), Positives = 218/316 (68%), Gaps = 11/316 (3%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L ++ YLDHLA+ERG A NT L +RGI L +V E DV+ F VAL Sbjct: 2 LAREIDAYLDHLAVERGAARNTLGAYRRDLGRYRDFLTERGIGGLEQVREADVAAFTVAL 61 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R G + L S+V ARALIAVRGLHRF V+PPTPGRRLPK+L Sbjct: 62 RSGGGDHPPLAASSV--ARALIAVRGLHRFAAAEGMTSTDVAHAVKPPTPGRRLPKALPY 119 Query: 126 DEVLALLEGAGGDNPADG--------PXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQ 177 D+VL LLE AGG DG P YSTG+RISE VGLDVDD+DT Sbjct: 120 DQVLRLLEAAGGGPAEDGDTAAADGGPRGLRDRALLELLYSTGARISEMVGLDVDDLDTT 179 Query: 178 ARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTP-AIFLNARGGRLSRQ 236 R V+L+GKGGKQR+VP+GRPA+ A+DAYLVRGRP LA G+GT A+FLN RGGRLSRQ Sbjct: 180 ERAVVLRGKGGKQRIVPIGRPALAAVDAYLVRGRPVLAAAGKGTGGALFLNVRGGRLSRQ 239 Query: 237 SAWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLV 296 SAWQVLQ AAERAGI + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQIYTLV Sbjct: 240 SAWQVLQTAAERAGIGAAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLV 299 Query: 297 TVHALREVWAGAHPRA 312 TV LREVWA AHPRA Sbjct: 300 TVSTLREVWATAHPRA 315 >tr|C2AQV6|C2AQV6_TSUPA Tax_Id=521096 SubName: Full=Tyrosine recombinase XerD subunit;[Tsukamurella paurometabola DSM 20162] Length = 324 Score = 347 bits (890), Expect = 1e-93 Identities = 191/310 (61%), Positives = 218/310 (70%), Gaps = 7/310 (2%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 LD L+ YLDHL +ERG AANT ++L + GI DLA V VS FLVAL Sbjct: 17 LDEALRAYLDHLTVERGAAANTLSSYRRDLDRYREYLVELGIDDLASVTSTQVSGFLVAL 76 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R G G L+A SAAR+LIAVRGLHRF VRPP P +RLPK+L+I Sbjct: 77 REGS--DGRPPLAASSAARSLIAVRGLHRFAAAEGLTASDVAREVRPPAPAKRLPKALSI 134 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 D V+ALLE AGGD +D P YS G+RISE LDVDDID Q+R+V+L G Sbjct: 135 DTVIALLEAAGGDGESDTPSRLRDRALLELLYSCGARISEVTALDVDDIDVQSRSVVLMG 194 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGGKQR+VP+GRPA+ A++AYLVRGRP L + + PA+FLN RGGRLSRQSAWQVL A Sbjct: 195 KGGKQRVVPIGRPALAAIEAYLVRGRPSLVK--KSNPALFLNVRGGRLSRQSAWQVLATA 252 Query: 246 AERAGITSG---VSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 302 AERAGI + VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVTV ALR Sbjct: 253 AERAGIDTDAVHVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVQALR 312 Query: 303 EVWAGAHPRA 312 EV+A AHPRA Sbjct: 313 EVYAQAHPRA 322 >tr|D0L944|D0L944_GORB4 Tax_Id=526226 SubName: Full=Tyrosine recombinase XerD;[Gordonia bronchialis] Length = 313 Score = 332 bits (850), Expect = 5e-89 Identities = 181/300 (60%), Positives = 206/300 (68%), Gaps = 5/300 (1%) Query: 13 YLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGDPES 72 YLDHL +ERG A NT +L RGI+ LA+V E D+ EFLVALRRGD + Sbjct: 18 YLDHLTVERGAAHNTVTSYRRDLERYQNYLIARGISGLAEVTESDIREFLVALRRGDEAT 77 Query: 73 GVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVLALL 132 G L+ S AR L+A R H F VRPP P RRLPKSL +DEVLA+L Sbjct: 78 GSRPLADSSIARTLVATRRFHGFAVDEGVVSTDVAHAVRPPRPARRLPKSLPVDEVLAIL 137 Query: 133 EGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGGKQRL 192 E + + D P YS G+RISEA LDVDD+DT AR V L+GKGGK+R+ Sbjct: 138 EAS---STGDHPRALRDRALLELLYSCGARISEATSLDVDDLDTAARAVRLRGKGGKERI 194 Query: 193 VPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAERAGIT 252 VPVG PA A+DAYLVRGRP LA R PA+FLNARGGRLSRQSAWQVL AAERAG+ Sbjct: 195 VPVGGPAADAIDAYLVRGRPVLATRS--APALFLNARGGRLSRQSAWQVLVSAAERAGLD 252 Query: 253 SGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGAHPRA 312 VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV+ +REV+A AHPRA Sbjct: 253 KAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVNTMREVYATAHPRA 312 >tr|C7MZG5|C7MZG5_SACVD Tax_Id=471857 SubName: Full=Tyrosine recombinase XerD subunit;[Saccharomonospora viridis] Length = 311 Score = 330 bits (846), Expect = 1e-88 Identities = 181/300 (60%), Positives = 207/300 (69%), Gaps = 6/300 (2%) Query: 13 YLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGDPES 72 Y+DHL +ERG A NT HL D G+TDL +V D V F +LR G+ + Sbjct: 16 YVDHLTVERGTARNTVDGYARDLRRYLAHLADAGVTDLRQVARDHVVGFAASLRHGEGDR 75 Query: 73 GVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVLALL 132 L S SAARAL AVRGLHRF VRPP RRLPK+L + +VL LL Sbjct: 76 PPLAPS--SAARALSAVRGLHRFAHAEGWTEEDPARDVRPPPLTRRLPKALPVADVLRLL 133 Query: 133 EGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGGKQRL 192 GD+ YSTG+RISEA GLDVDD+D RTV+L GKGG+QRL Sbjct: 134 NTPTGDDARS----LRDRALLELLYSTGARISEATGLDVDDVDRAERTVVLDGKGGRQRL 189 Query: 193 VPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAERAGIT 252 VPVGRPA++ALDAYL+R RP LA +GRGT A+FLNARGGRLSRQ AWQVL+ AAERAGI+ Sbjct: 190 VPVGRPALEALDAYLIRARPALAAKGRGTGAVFLNARGGRLSRQGAWQVLKVAAERAGIS 249 Query: 253 SGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGAHPRA 312 + VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVTV+ LREV+A HPRA Sbjct: 250 TPVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVNTLREVYATTHPRA 309 >tr|A4FKA7|A4FKA7_SACEN Tax_Id=405948 (xerD)SubName: Full=Integrase/recombinase;[Saccharopolyspora erythraea] Length = 313 Score = 328 bits (841), Expect = 5e-88 Identities = 178/307 (57%), Positives = 210/307 (68%), Gaps = 6/307 (1%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L + GYL+HLA+ERG A +T HL + G+ L +V +S FL L Sbjct: 11 LSSVFSGYLNHLAVERGTARSTLDSYARDLRRYADHLLESGVRALGEVRSTHLSAFLAEL 70 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R G PE L S SAARALIA RGLHRF + PP+P +RLPK+L + Sbjct: 71 REGGPERPALAQS--SAARALIAARGLHRFAHADGIVEVDVAREISPPSPPKRLPKALPV 128 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQG 185 +VL LL+ GG++ YS+G+RISEAVGLDVDD+D RT+LL G Sbjct: 129 SDVLRLLDNTGGEDVRG----LRDRALLELLYSSGARISEAVGLDVDDVDEAERTILLDG 184 Query: 186 KGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDA 245 KGG+QRLVPVGRPA+ AL AY+VR RP LA RGRG+ A+FLN+RG RLSRQSAW L+ A Sbjct: 185 KGGRQRLVPVGRPALAALGAYMVRARPVLAGRGRGSSAVFLNSRGTRLSRQSAWNALKSA 244 Query: 246 AERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVW 305 AERAGI SGVSPH+LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTL+TV+ LREV Sbjct: 245 AERAGIGSGVSPHVLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLITVNTLREVH 304 Query: 306 AGAHPRA 312 A AHPRA Sbjct: 305 ATAHPRA 311 >tr|C0TZK1|C0TZK1_9ACTO Tax_Id=526225 SubName: Full=Tyrosine recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 304 Score = 320 bits (819), Expect = 2e-85 Identities = 175/304 (57%), Positives = 210/304 (69%), Gaps = 8/304 (2%) Query: 12 GYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGDPE 71 GYLDHL +ERG+AANT + L+ G+ L +V E DV+ FL ALR+GD + Sbjct: 4 GYLDHLTVERGLAANTISSYRRDLRRYTEFLDAAGVRGLGEVAESDVAGFLAALRQGDDD 63 Query: 72 SGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVLAL 131 L SA SAARA++AVRGLHRF VRPP+P RRLPK++ ++ V+AL Sbjct: 64 HPPL--SATSAARAVVAVRGLHRFALLDGLVPDDVAHEVRPPSPARRLPKAIPVESVVAL 121 Query: 132 LEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGGKQR 191 +E AG +GP Y TG+RISEAVGL VDD+D V L GKGGKQR Sbjct: 122 IEAAGA---LEGPRGLRDRALLELLYGTGARISEAVGLAVDDLDRGQSVVRLAGKGGKQR 178 Query: 192 LVPVGRPAVQALDAYLVRGRPELARRGRGTP---AIFLNARGGRLSRQSAWQVLQDAAER 248 +VPVG A++A++ YLVR RP LA GRG A+FLNARGG LSRQSAW +L+ AAER Sbjct: 179 IVPVGSYALRAVEDYLVRARPALAAAGRGGVRGGALFLNARGGSLSRQSAWAILRTAAER 238 Query: 249 AGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 308 AG+T+ VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV LREV+A + Sbjct: 239 AGLTAEVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDRLREVYASS 298 Query: 309 HPRA 312 HPRA Sbjct: 299 HPRA 302 >tr|C6WA61|C6WA61_ACTMD Tax_Id=446462 SubName: Full=Tyrosine recombinase XerD;[Actinosynnema mirum] Length = 299 Score = 319 bits (817), Expect = 3e-85 Identities = 181/301 (60%), Positives = 204/301 (67%), Gaps = 15/301 (4%) Query: 13 YLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGDPES 72 YLDHLA+ERG A NT HLE G+ L V E V +FL LR Sbjct: 13 YLDHLAVERGAARNTLDSYARDLRRYLAHLESAGL-GLDAVTEAVVGDFLAGLRES---- 67 Query: 73 GVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVLALL 132 GL+A SAAR L+AVRGLHRF V+PP RRLPK+L + +VL LL Sbjct: 68 ---GLAASSAARTLVAVRGLHRFAHREGLTAADPAKDVQPPAAPRRLPKALPVADVLRLL 124 Query: 133 EGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGGKQRL 192 + AG D P YSTG+RISE VGLDVDD+D RT LL GKGGKQR+ Sbjct: 125 DTAG-----DTPAALRDRALLELLYSTGARISEVVGLDVDDVDAAERTALLDGKGGKQRV 179 Query: 193 VPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAERAGIT 252 VPVGRPA+ A++AYLVR RP LA+RG PA+FLNARGGRLSRQSAWQVL+ AAERAG+ Sbjct: 180 VPVGRPALAAVEAYLVRARPVLAKRGG--PALFLNARGGRLSRQSAWQVLKTAAERAGVA 237 Query: 253 SGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGAHPRA 312 + VSPH LRHSFATHLLE GADVRVVQELLGHASVTTTQ+YTLVTV LREV+A AHPRA Sbjct: 238 AEVSPHTLRHSFATHLLEAGADVRVVQELLGHASVTTTQVYTLVTVTTLREVYATAHPRA 297 Query: 313 T 313 T Sbjct: 298 T 298 >tr|C1WQW3|C1WQW3_9ACTO Tax_Id=479435 SubName: Full=Tyrosine recombinase XerD subunit;[Kribbella flavida DSM 17836] Length = 313 Score = 313 bits (803), Expect = 1e-83 Identities = 168/303 (55%), Positives = 206/303 (67%), Gaps = 2/303 (0%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 + YLDHL +ERG+AANT ++L GI+ L +V E V +FL+ LR GD Sbjct: 8 VSAYLDHLTVERGLAANTLASYRRDLRRYDEYLAGAGISALGRVTEAVVGDFLMRLREGD 67 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 L +A SA R ++AVRG H+F V+PP P +RLPK+L++DEV Sbjct: 68 EHHPPL--TASSAGRTVVAVRGFHKFCLREGLTVIDPAAAVKPPVPPQRLPKALSVDEVT 125 Query: 130 ALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGGK 189 +L A G + Y TG+RISEAVGLDVDD+D ++ VLL+GKG K Sbjct: 126 RILAAAAGADAEPAVLATRDAALLEFLYGTGARISEAVGLDVDDVDLESGQVLLRGKGSK 185 Query: 190 QRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAERA 249 +R+VPVG A +AL AY VRGRP+L RGRGT A+FLNARGGRLSRQSAW VL+ AA+RA Sbjct: 186 ERVVPVGSYAREALSAYQVRGRPDLVARGRGTHALFLNARGGRLSRQSAWTVLRRAAQRA 245 Query: 250 GITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGAH 309 GI+ +SPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV LREV+A +H Sbjct: 246 GISKEISPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDKLREVYATSH 305 Query: 310 PRA 312 PRA Sbjct: 306 PRA 308 >tr|Q47QN0|Q47QN0_THEFY Tax_Id=269800 SubName: Full=Tyrosine recombinase XerD;[Thermobifida fusca] Length = 321 Score = 312 bits (799), Expect = 4e-83 Identities = 180/316 (56%), Positives = 206/316 (65%), Gaps = 15/316 (4%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L T ++GYLDHL +ERG+AANT L RGITDL V DDV+ FL L Sbjct: 8 LHTAVRGYLDHLTVERGLAANTLQSYRRDLNRYLDFLTARGITDLRDVRADDVASFLRTL 67 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R GD LG A SA RA+IAVRGLHRF VRPP RRLPK++T+ Sbjct: 68 REGDAHHRPLG--ANSAGRAVIAVRGLHRFALREGLTAHDPAHEVRPPALQRRLPKAITV 125 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDI---------DT 176 +V ALL A + GP Y TG+RISE VGLDVDD+ DT Sbjct: 126 AQVEALLAAA---DIGGGPRALRDRALIELLYGTGARISEVVGLDVDDVTRLRPDPHADT 182 Query: 177 QARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQ 236 + V +GKGGK+R+VPVGR A A+DAYLVR RP LA GRG+ A+FLNARGGRL+RQ Sbjct: 183 EVAAVRFRGKGGKERIVPVGRYARTAVDAYLVRARPGLAAAGRGSSALFLNARGGRLTRQ 242 Query: 237 SAWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLV 296 AW VL AAERAG+ VSPH LRHSFATHL++GGADVRVVQELLGHASVTTTQ+YTLV Sbjct: 243 GAWAVLHAAAERAGLRD-VSPHTLRHSFATHLIDGGADVRVVQELLGHASVTTTQVYTLV 301 Query: 297 TVHALREVWAGAHPRA 312 TV LREV+A AHPRA Sbjct: 302 TVDRLREVYAAAHPRA 317 >tr|C1RJR5|C1RJR5_9CELL Tax_Id=446466 SubName: Full=Tyrosine recombinase XerD;[Cellulomonas flavigena DSM 20109] Length = 310 Score = 308 bits (788), Expect = 7e-82 Identities = 173/310 (55%), Positives = 206/310 (66%), Gaps = 8/310 (2%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L L+GYL HLA+ERG+AA+T HL RG T+ A++ E D ++++ L Sbjct: 5 LTAALEGYLAHLAVERGLAAHTLAAYRRDLTRYVAHLHARGRTEPAEITERDAEDYVLVL 64 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R G VL S SAAR+++A+RG HRF +RPP RRLPK++ + Sbjct: 65 RTGSDGRAVL--SPASAARSVVALRGWHRFLALDGLAPTDAAAELRPPAQPRRLPKAIGV 122 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDT--QARTVLL 183 D+V LL+ AG DGP YSTG+RISEAVGLDVDD+D V L Sbjct: 123 DDVARLLDAAG---LGDGPVPLRDRALLELVYSTGARISEAVGLDVDDLDLTPDRGAVRL 179 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQ 243 GKGGK+R+VPVG A QA+DAYLVRGRP LA GRGTPAIFLN RG RLSRQSAW VL+ Sbjct: 180 LGKGGKERVVPVGSYAAQAVDAYLVRGRPALAAAGRGTPAIFLNTRGARLSRQSAWAVLR 239 Query: 244 DAAERAGITSG-VSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 302 AAERAG+ + +SPH LRHSFATHLL GGADVRVVQELLGHASV TTQIYTLVT +R Sbjct: 240 TAAERAGLAADHLSPHTLRHSFATHLLAGGADVRVVQELLGHASVATTQIYTLVTPDTMR 299 Query: 303 EVWAGAHPRA 312 EV+A +HPRA Sbjct: 300 EVYAASHPRA 309 >tr|A4X686|A4X686_SALTO Tax_Id=369723 SubName: Full=Tyrosine recombinase XerD;[Salinispora tropica] Length = 325 Score = 306 bits (784), Expect = 2e-81 Identities = 173/309 (55%), Positives = 203/309 (65%), Gaps = 8/309 (2%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 ++GYLDHLA+ERG+AANT L G+TDLA V V L LR G+ Sbjct: 17 VRGYLDHLAVERGLAANTLASYRRDLAHYLDTLASIGVTDLASVAPGQVEAHLARLRVGN 76 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 G L+A SAARA+ AVRGLHRF VRPP P RRLP++L +D+V+ Sbjct: 77 --EGRRPLAASSAARAVSAVRGLHRFALREGLTGADPSRDVRPPAPPRRLPRALPVDDVI 134 Query: 130 ALLEGAGGDNPADG--PXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKG 187 LLE G + A G P Y TG+RISEAVG VDD+D A VLL+GKG Sbjct: 135 RLLEAVGPVSAAGGQAPLGLRDRALLEFLYGTGARISEAVGAAVDDLDLDAGAVLLRGKG 194 Query: 188 GKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAE 247 G+ RLVP+G AV AL AYLVR RP LA G GTP +FLN+RGG LSRQ AW +L++AA Sbjct: 195 GRNRLVPIGGYAVAALHAYLVRARPGLAAAGGGTPRVFLNSRGGPLSRQGAWTILRNAAR 254 Query: 248 RAGIT----SGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALRE 303 RAG++ VSPH LRHS+ATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV LRE Sbjct: 255 RAGLSDVGPQAVSPHTLRHSYATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVERLRE 314 Query: 304 VWAGAHPRA 312 V+A AHPRA Sbjct: 315 VYATAHPRA 323 >tr|A8LYT7|A8LYT7_SALAI Tax_Id=391037 SubName: Full=Tyrosine recombinase XerD;[Salinispora arenicola] Length = 345 Score = 304 bits (779), Expect = 8e-81 Identities = 175/313 (55%), Positives = 202/313 (64%), Gaps = 8/313 (2%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L ++GYLDHLA+ERG+AANT L G+T+LA V V L L Sbjct: 33 LQHAVRGYLDHLAVERGLAANTLASYRRDLGRYLDTLASVGVTELASVDPGQVEVHLARL 92 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R GD G L+A SAARA AVRGLHRF +RP P RRLP++L + Sbjct: 93 RAGD--DGHPPLAASSAARAASAVRGLHRFALREGLAGVDPSRDLRPAAPPRRLPRALPV 150 Query: 126 DEVLALLEGAGG-DNPADG-PXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLL 183 D+VL LLE AG DG P Y TG+RISEAVG+ VDD+DT VLL Sbjct: 151 DDVLKLLEAAGSVAATGDGAPLALRDRALLEFLYGTGARISEAVGVAVDDLDTDTGAVLL 210 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQ 243 +GKGG+ RLVP+G AV AL YLVR RP LA GRGTPA+FLNARGG LSRQ AW +L+ Sbjct: 211 RGKGGRNRLVPIGGYAVAALRGYLVRARPGLAAAGRGTPAVFLNARGGPLSRQGAWAILR 270 Query: 244 DAAERAGI----TSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVH 299 AA RAG+ VSPH LRHS+ATHLL+GGADVRVVQELLGHASVTTTQ+YT+VTV Sbjct: 271 GAARRAGLPGVGAEAVSPHTLRHSYATHLLDGGADVRVVQELLGHASVTTTQVYTMVTVQ 330 Query: 300 ALREVWAGAHPRA 312 LREV+A AHPRA Sbjct: 331 RLREVYATAHPRA 343 >tr|A1SJK8|A1SJK8_NOCSJ Tax_Id=196162 SubName: Full=Tyrosine recombinase XerD;[Nocardioides sp.] Length = 318 Score = 304 bits (779), Expect = 8e-81 Identities = 178/306 (58%), Positives = 205/306 (66%), Gaps = 11/306 (3%) Query: 13 YLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGDPES 72 YLDHL +ERG+A NT ++L + G+ LA V E V+ FLV LR GD + Sbjct: 16 YLDHLTVERGLATNTLTSYRRDLRRYQEYLAECGVEHLADVTEGTVAAFLVRLREGDRDH 75 Query: 73 GVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVLALL 132 L SA SAAR ++AVRG HRF V+PPTP +RLPK+L + +V A+L Sbjct: 76 PAL--SATSAARTVVAVRGFHRFAVADGLAATDPASAVKPPTPAKRLPKALPLADVEAIL 133 Query: 133 EGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQAR----TVLLQGKGG 188 E AG Y TG+RISEAVGLDVDD+D TVLL+GKGG Sbjct: 134 EAAGAPGTT---LALRDRALLEVLYGTGARISEAVGLDVDDLDWGESGVEGTVLLRGKGG 190 Query: 189 KQRLVPVGRPAVQALDAYLVRGRPEL-ARRGRGTP-AIFLNARGGRLSRQSAWQVLQDAA 246 K+RLVPVG A +A+DAYLVRGRPEL A R T A+FLNARGGRLSRQSAW VL AA Sbjct: 191 KERLVPVGSYAREAVDAYLVRGRPELVAASARVTGGALFLNARGGRLSRQSAWAVLVRAA 250 Query: 247 ERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWA 306 ERAG+T VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV LREV+A Sbjct: 251 ERAGVTRDVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVDNLREVFA 310 Query: 307 GAHPRA 312 AHPRA Sbjct: 311 TAHPRA 316 >tr|C8XHP9|C8XHP9_NAKMY Tax_Id=479431 SubName: Full=Tyrosine recombinase XerD;[Nakamurella multipartita] Length = 353 Score = 303 bits (776), Expect = 2e-80 Identities = 183/332 (55%), Positives = 206/332 (62%), Gaps = 32/332 (9%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 L+GYLDHL +ERGVA NT + L G T +A V DVS+FLV LR G Sbjct: 24 LRGYLDHLVVERGVARNTVLSYRRDLNRYLQFLAAAGRTRVADVTAADVSDFLVCLRTG- 82 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 G L+A SAARA++A RG HRF V PPTP RRLPK+L ++ + Sbjct: 83 -ADGRPPLAASSAARAVVAARGWHRFLLNEGTAEADPSRDVHPPTPARRLPKALPVEAIG 141 Query: 130 ALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQ------------ 177 LL+ AG +P DGP Y+TG+RISE VGLDVDDID Sbjct: 142 RLLDAAGSADP-DGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPGRLAGRSSTDP 200 Query: 178 ------------ARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTP--- 222 V L GKG K+RLVPVG A++AL+AYLVRGRP LA GRG Sbjct: 201 TDPTDPQVAPPITSVVRLHGKGAKERLVPVGSFALRALEAYLVRGRPVLAAAGRGAGPAR 260 Query: 223 -AIFLNARGGRLSRQSAWQVLQDAAERAGI-TSGVSPHMLRHSFATHLLEGGADVRVVQE 280 A+FLN RGGRLSRQSAWQVL DAA RAG+ SGVSPH LRHSFATHLLEGGADVR VQE Sbjct: 261 GALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHSFATHLLEGGADVRSVQE 320 Query: 281 LLGHASVTTTQIYTLVTVHALREVWAGAHPRA 312 LLGHASVTTTQIYTLVTV ALREV+ AHPRA Sbjct: 321 LLGHASVTTTQIYTLVTVDALREVYVTAHPRA 352 >tr|C4RHX9|C4RHX9_9ACTO Tax_Id=219305 SubName: Full=Tyrosine recombinase xerD;[Micromonospora sp. ATCC 39149] Length = 336 Score = 301 bits (771), Expect = 7e-80 Identities = 175/312 (56%), Positives = 203/312 (65%), Gaps = 11/312 (3%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 ++GYLDHL +ERG++ANT L D GI DLA V V L LR GD Sbjct: 25 VRGYLDHLTVERGLSANTLASYRRDLERYLATLTDAGIGDLASVAAGVVEAHLARLRAGD 84 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 L +S SAARA AVRGLHRF VRPP P RRLP++L +D+V+ Sbjct: 85 DGHPPLAVS--SAARAASAVRGLHRFALREGLAGADPSRDVRPPAPPRRLPRALAVDQVV 142 Query: 130 ALLEGAGGDNPA-DG-PXXXXXXXXXXXXYSTGSRISEAVGLDVDDID---TQARTVLLQ 184 LLE AG A DG P Y TG+RISEAVG +DD+D T TVLL+ Sbjct: 143 RLLETAGPVTAAGDGAPLALRDRALLEFLYGTGARISEAVGAAIDDLDGLDTGEATVLLR 202 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQD 244 GKGG+ RLVPVG A +AL A+LVRGRP L GRGTPA+F+N RGG L+RQ AW +L+ Sbjct: 203 GKGGRSRLVPVGGYAAEALRAWLVRGRPALVAAGRGTPAVFVNVRGGTLTRQGAWTILRR 262 Query: 245 AAERAGI----TSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 AAERAG+ + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ+YTLVTV Sbjct: 263 AAERAGLPVDGANAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVER 322 Query: 301 LREVWAGAHPRA 312 LREV+A AHPRA Sbjct: 323 LREVYATAHPRA 334 >tr|A3TKV3|A3TKV3_9MICO Tax_Id=313589 SubName: Full=Tyrosine recombinase;[Janibacter sp. HTCC2649] Length = 299 Score = 300 bits (768), Expect = 1e-79 Identities = 169/304 (55%), Positives = 201/304 (66%), Gaps = 7/304 (2%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 ++ +L HL +ERG++ANT +L GI D AKV E VSEFL LR GD Sbjct: 1 MRSWLTHLDVERGLSANTLKAYRRDLGRWTAYLSVVGIDDPAKVTERHVSEFLARLREGD 60 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 + L +A SAAR L++VRGLH+F V PP P RLPK++++ EV Sbjct: 61 EDHPAL--AANSAARTLVSVRGLHKFLALEGEVDADPAAAVSPPPPPSRLPKAISVSEVE 118 Query: 130 ALLEGAG-GDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQGKGG 188 LL A GD PA Y TG+RISEAVGLD+DD+D A V L+GKGG Sbjct: 119 RLLNAAAVGDTPAS----LRDKALLELLYGTGARISEAVGLDIDDVDMDAGIVRLEGKGG 174 Query: 189 KQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQDAAER 248 KQRLVP+G A AL AYLVRGR + +G+GTPAIFLN RG RLSRQSAW +L+ AA R Sbjct: 175 KQRLVPLGSYARTALTAYLVRGRGTFSTKGKGTPAIFLNQRGSRLSRQSAWSILRAAAAR 234 Query: 249 AGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALREVWAGA 308 A ++ +SPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVTV LREV+A + Sbjct: 235 ADLSGHLSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTVQQLREVYAQS 294 Query: 309 HPRA 312 HPRA Sbjct: 295 HPRA 298 >tr|A0LUA3|A0LUA3_ACIC1 Tax_Id=351607 SubName: Full=Tyrosine recombinase XerD;[Acidothermus cellulolyticus] Length = 311 Score = 299 bits (766), Expect = 2e-79 Identities = 170/311 (54%), Positives = 203/311 (65%), Gaps = 9/311 (2%) Query: 5 TLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVA 64 T+ ++ YL H+A+E+G+A NT + LE RG TD V E+ ++ FL A Sbjct: 5 TVGDLVEAYLAHVAVEKGLAKNTVAGYRRDLRRYQEFLEQRGTTDPRAVTEEHITAFLAA 64 Query: 65 LRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLT 124 LR GD + L +S S+ARA++AVRGLHRF VRPPTPGRRLPK++T Sbjct: 65 LRTGDADHPPLAVS--SSARAVVAVRGLHRFAAMDGITADDPSRDVRPPTPGRRLPKAIT 122 Query: 125 IDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLLQ 184 + EV LL G P + Y TG+RISEAVGL +DD+D A V L+ Sbjct: 123 VAEVERLLAAVDGHAPRE----LRDRALLEVLYGTGARISEAVGLAIDDLDLDAGLVRLR 178 Query: 185 GKGGKQRLVPVGRPAVQALDAYLVRGRPEL---ARRGRGTPAIFLNARGGRLSRQSAWQV 241 GKG KQR+VP+G A AL YL GRP L AR G A+FLNARGGRLSRQSAW V Sbjct: 179 GKGSKQRVVPLGGYARSALREYLTAGRPALLAAARSGSARGAVFLNARGGRLSRQSAWTV 238 Query: 242 LQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHAL 301 L+ AA RAG+ + +SPH LRHSFATHLLEGGAD+RVVQELLGHASVTTTQIYTLVTV L Sbjct: 239 LRRAALRAGLATVISPHTLRHSFATHLLEGGADIRVVQELLGHASVTTTQIYTLVTVDTL 298 Query: 302 REVWAGAHPRA 312 REV+A AHPRA Sbjct: 299 REVYAMAHPRA 309 >tr|A0JV45|A0JV45_ARTS2 Tax_Id=290399 SubName: Full=Tyrosine recombinase XerD;[Arthrobacter sp.] Length = 346 Score = 299 bits (765), Expect = 3e-79 Identities = 167/312 (53%), Positives = 201/312 (64%), Gaps = 11/312 (3%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 +D + YL H+ +ERG+AANT +L G + V V+ F+ AL Sbjct: 39 IDRAVNDYLQHMGVERGLAANTLSAYRRDLARYANYLAACGPSRPGDVTRRHVTGFVQAL 98 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 G LG+ SAAR ++AVRGLH+F V PP PG+RLPK++++ Sbjct: 99 SDGSDGGTALGVR--SAARTVVAVRGLHKFWALEGITTADPASDVHPPMPGKRLPKAISV 156 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQA-----RT 180 DEV +LE AG D YSTG+RISEAVGLDVDDI QA Sbjct: 157 DEVTRILEAAGTDTATG----LRDRALLEFLYSTGARISEAVGLDVDDISLQADQAGPAI 212 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 V L GKG K+RLVP+G +ALDAYLVRGRP LA +G+GTPA+FLNARGGR+SRQSAW Sbjct: 213 VRLFGKGSKERLVPLGSYGARALDAYLVRGRPLLAAKGKGTPALFLNARGGRISRQSAWT 272 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 +L+ AA++A IT VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVT Sbjct: 273 ILKAAADKANITKDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTADT 332 Query: 301 LREVWAGAHPRA 312 LRE++A AHPRA Sbjct: 333 LREIYAAAHPRA 344 >tr|B8HGE6|B8HGE6_ARTCA Tax_Id=452863 SubName: Full=Tyrosine recombinase XerD;[Arthrobacter chlorophenolicus] Length = 362 Score = 295 bits (754), Expect = 6e-78 Identities = 165/314 (52%), Positives = 202/314 (64%), Gaps = 13/314 (4%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 +D + YL H+ +ERG+AANT ++L G + V+ F+ AL Sbjct: 53 IDRGVTDYLQHMGVERGLAANTLAAYRRDLARYSRYLAGTGCQQPGDITRHHVTGFVRAL 112 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 G LG+ SAAR ++AVRGLH+F V PP G+RLPK++T+ Sbjct: 113 SDGSDGGTALGVR--SAARTVVAVRGLHKFWALEGHTASDPASEVHPPMAGKRLPKAITV 170 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDI-----DTQART 180 DEV +LE AG D YSTG+RISEAVGLDVDDI DT+ Sbjct: 171 DEVTRILEAAGTDTATG----LRDRALLEFLYSTGARISEAVGLDVDDISLAGDDTEQGP 226 Query: 181 VLLQ--GKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSA 238 +++ GKG K+RLVP+G +AL+AYLVRGRP LA +G+GTPA+FLNARGGR+SRQSA Sbjct: 227 AIVRLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKGKGTPALFLNARGGRISRQSA 286 Query: 239 WQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTV 298 W +L+ AAE+A IT VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVT Sbjct: 287 WTILKVAAEKANITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTA 346 Query: 299 HALREVWAGAHPRA 312 LREV+A AHPRA Sbjct: 347 DTLREVYAAAHPRA 360 >tr|A1R5A8|A1R5A8_ARTAT Tax_Id=290340 (xerD)SubName: Full=Tyrosine recombinase XerD;[Arthrobacter aurescens] Length = 319 Score = 294 bits (752), Expect = 1e-77 Identities = 161/312 (51%), Positives = 199/312 (63%), Gaps = 11/312 (3%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 +D + YL H+ +ERG+AANT L +G+ + V+ F+ AL Sbjct: 12 VDRAITDYLQHVGVERGLAANTLSAYRRDLARYSNFLAAQGVEQPGSITRHHVTAFVQAL 71 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 G + LG+ SAAR ++AVRGLH+F V PP PG+RLPK++++ Sbjct: 72 SDGSDGAAALGVR--SAARTVVAVRGLHKFWALEGTTTADPASDVHPPMPGKRLPKAISV 129 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQ-----ART 180 EV +LE AG D YSTG+RISEAVGLDVDD+ + Sbjct: 130 GEVTRILEAAGSDTATG----LRDRALLEFLYSTGARISEAVGLDVDDVSLEDTGGDPAI 185 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 V L GKG K+RLVP+G +A+ AY+VRGRP LA +G+GTPA+FLNARGGR+SRQSAW Sbjct: 186 VRLFGKGSKERLVPLGSFGARAVGAYVVRGRPLLASKGKGTPALFLNARGGRISRQSAWT 245 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 +L+ AAE+A IT VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVT Sbjct: 246 ILKTAAEKANITKDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTADT 305 Query: 301 LREVWAGAHPRA 312 LREV+A AHPRA Sbjct: 306 LREVYAAAHPRA 317 >tr|C0W3E4|C0W3E4_9ACTO Tax_Id=525246 SubName: Full=Tyrosine recombinase;[Actinomyces urogenitalis DSM 15434] Length = 316 Score = 290 bits (742), Expect = 2e-76 Identities = 165/311 (53%), Positives = 203/311 (65%), Gaps = 7/311 (2%) Query: 4 LTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLV 63 + L+ +GYL HL +ERG++ NT + L RG+ DLA V E DV+ FL Sbjct: 9 VALERARRGYLAHLRVERGLSPNTLAAYERDLTRYCRFLLARGVQDLAAVTEADVAAFLE 68 Query: 64 ALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSL 123 A+R GD G L+A SA+R + AVRG H+F V PP GRRLPK+L Sbjct: 69 AIRTGD--DGGRALAASSASRTVTAVRGWHKFLLDEGNTDVDPSAAVHPPQVGRRLPKAL 126 Query: 124 TIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQARTVLL 183 +++EV ALLE A D D P Y+TG+RISEAVGL +DD+D ++ + L Sbjct: 127 SVEEVQALLEAASTD---DSPRSLRDRALLELLYATGARISEAVGLVIDDLDRESGCIRL 183 Query: 184 QGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQVLQ 243 GKG K+R+VPVG+ A ALDAYLV+ RP LA +GRG P +FLN G LSRQSAW VL+ Sbjct: 184 FGKGRKERIVPVGQYAWDALDAYLVQARPVLAAKGRGVPEVFLNTLGRPLSRQSAWGVLR 243 Query: 244 DAAERAGITSG--VSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHAL 301 A+ RAG+ + VSPH LRHSFATHLL GGADVRVVQE+LGHASVTTTQIYT VTV L Sbjct: 244 QASARAGLGADKHVSPHTLRHSFATHLLAGGADVRVVQEMLGHASVTTTQIYTKVTVEHL 303 Query: 302 REVWAGAHPRA 312 REV+A +HPRA Sbjct: 304 REVYATSHPRA 314 >tr|D1BS98|D1BS98_9MICO Tax_Id=446471 SubName: Full=Tyrosine recombinase XerD;[Xylanimonas cellulosilytica DSM 15894] Length = 331 Score = 289 bits (739), Expect = 3e-76 Identities = 173/321 (53%), Positives = 195/321 (60%), Gaps = 20/321 (6%) Query: 6 LDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVAL 65 L+ L YL HL +ERG++ NT +HLE G T L V EDDV+ F+ A+ Sbjct: 16 LEAALDDYLAHLRVERGLSHNTTAAYRRDLARYVRHLERLGRTSLGAVREDDVTGFVTAV 75 Query: 66 RRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTI 125 R G G LSA S ARAL AVRG HRF VR PT RRLP +L++ Sbjct: 76 REG--ADGGARLSASSTARALAAVRGWHRFAHAEGLATQDPAAEVRAPTQLRRLPHALSV 133 Query: 126 DEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDI----------- 174 D V LL+ AG DGP YSTG RISE VGLDVD + Sbjct: 134 DAVTRLLDAAG---VGDGPVPLRDRALLELLYSTGGRISEVVGLDVDALGWLGAGSAPGD 190 Query: 175 ---DTQARTVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGG 231 D V L GKG KQR+VPVG A+ ALDAYLVR RP LA G GTPA+FLN RG Sbjct: 191 GAGDDGPAVVRLHGKGDKQRIVPVGSYAIAALDAYLVRARPALAAAGSGTPALFLNTRGR 250 Query: 232 RLSRQSAWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQ 291 LSRQSAW VLQ A+ RAG+ + VSPH LRHSFATHLL+GGADVRVVQELLGHASVTTTQ Sbjct: 251 PLSRQSAWAVLQAASARAGLEN-VSPHTLRHSFATHLLQGGADVRVVQELLGHASVTTTQ 309 Query: 292 IYTLVTVHALREVWAGAHPRA 312 IYT+VT LREV+A HPRA Sbjct: 310 IYTMVTPDTLREVYAATHPRA 330 >tr|A9WQJ1|A9WQJ1_RENSM Tax_Id=288705 SubName: Full=Integrase/recombinase (XerD/RipX family);[Renibacterium salmoninarum] Length = 312 Score = 284 bits (727), Expect = 8e-75 Identities = 156/312 (50%), Positives = 198/312 (63%), Gaps = 15/312 (4%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 L+ YL HLA+ERG+AANT L +G+ ++ +V++F AL G Sbjct: 5 LREYLQHLAVERGLAANTLAAYRRDLTRYTNFLASQGVRTPEQISRKNVTDFAQALSTGS 64 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 + LG+ SAAR ++A+RG+H+F V PP GRRLPK++++ EV Sbjct: 65 DGATALGVR--SAARCIVALRGMHKFWALEATTTADPASEVHPPMAGRRLPKAISVAEVT 122 Query: 130 ALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDI---------DTQART 180 +LE +G D YSTG+RISEA+GLDVDD+ + Sbjct: 123 KILEASGSDTATG----LRDRALLEFLYSTGARISEAIGLDVDDVVGANSVGNDQSGPAV 178 Query: 181 VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAWQ 240 V L GKG K+R+VP+G +A++AYLVRGRP L+ G+ TPA+FLN RGGRLSRQSAW Sbjct: 179 VRLFGKGSKERIVPLGSYGARAIEAYLVRGRPLLSATGKATPALFLNVRGGRLSRQSAWA 238 Query: 241 VLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHA 300 +L+ AAE+A I+ VSPH LRHSFATHLLEGGADVRVVQELLGHASVTTTQ+YTLVT Sbjct: 239 ILKTAAEKAEISKVVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVTADT 298 Query: 301 LREVWAGAHPRA 312 LREV+A AHPRA Sbjct: 299 LREVYASAHPRA 310 >tr|A8LE61|A8LE61_FRASN Tax_Id=298653 SubName: Full=Integrase family protein;[Frankia sp.] Length = 383 Score = 283 bits (723), Expect = 2e-74 Identities = 161/313 (51%), Positives = 198/313 (63%), Gaps = 14/313 (4%) Query: 10 LQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFLVALRRGD 69 ++ YLDH+ ERG+A N+ +HL GIT LA VGE ++EF ALR GD Sbjct: 26 IERYLDHVDGERGLARNSVLAYRRDLRRYREHLAAGGITSLAAVGEAQIAEFAAALREGD 85 Query: 70 PESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKSLTIDEVL 129 L + S AR L+AVR LHRF VRPP P RRLP++LT+D+V Sbjct: 86 ETHPPL--APASVARMLVAVRSLHRFAAQEGDVSEDVARPVRPPVPPRRLPRALTVDQVS 143 Query: 130 ALLEGA----------GGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQAR 179 A++ A G +PA+ Y TG+RISEAVGLD+DD+D Sbjct: 144 AVIAAAVAGGPEYAEVSGGDPAELARRLRSAALLELLYGTGARISEAVGLDLDDLDLDRS 203 Query: 180 TVLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPELARRGRGTPAIFLNARGGRLSRQSAW 239 V L+GKGG+ R+VP+GR AV AL+ YL RGRP L GT A+F++ RG RLSRQSAW Sbjct: 204 AVRLRGKGGRDRVVPLGRYAVTALERYLRRGRPHLVTECSGT-AVFVSRRGNRLSRQSAW 262 Query: 240 QVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVH 299 L+ AA AG+ G SPH+LRHSFATHLL+GGADVRVVQELLGHASV+TTQIYTLVT+ Sbjct: 263 SALRAAANAAGVP-GASPHVLRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVTMD 321 Query: 300 ALREVWAGAHPRA 312 LREV+A +HPRA Sbjct: 322 HLREVYASSHPRA 334 >tr|C5CAL4|C5CAL4_MICLC Tax_Id=465515 SubName: Full=Tyrosine recombinase XerD;[Micrococcus luteus] Length = 321 Score = 281 bits (719), Expect = 7e-74 Identities = 166/319 (52%), Positives = 198/319 (62%), Gaps = 15/319 (4%) Query: 3 TLTLDTQLQGYLDHLAIERGVAANTXXXXXXXXXXXXKHLEDRGITDLAKVGEDDVSEFL 62 T L + +LDHLA+ERG+A NT + LE G+ V V+ F+ Sbjct: 8 TSALAAPFRRHLDHLAVERGLAENTLAAYRRDLARYRRWLEAAGVRAPGDVDPGHVAGFV 67 Query: 63 VALRRGDPESGVLGLSAVSAARALIAVRGLHRFXXXXXXXXXXXXXXVRPPTPGRRLPKS 122 AL GD G L+ SAAR L AVRGLHRF V PP PG RLP++ Sbjct: 68 QALATGD--DGGRPLAVRSAARVLAAVRGLHRFWALEGLAETDPARDVHPPKPGTRLPRA 125 Query: 123 LTIDEVLALLEGAGGDNPADGPXXXXXXXXXXXXYSTGSRISEAVGLDVDDIDTQART-- 180 L +++V ALL+ P D P Y TG+RISE VGLDVDD+ A+T Sbjct: 126 LPVEQVSALLDAV----PTDTPAGLRDRALLEFLYGTGARISEVVGLDVDDVVGLAQTGD 181 Query: 181 ------VLLQGKGGKQRLVPVGRPAVQALDAYLVRGRPEL-ARRGRGTPAIFLNARGGRL 233 V L GKG K+R+VP+G A ALDA+LVRGRP + A R TPA+F+NA GGRL Sbjct: 182 DGGQPVVRLFGKGSKERVVPIGSYAAAALDAWLVRGRPTIMAGAARSTPALFVNACGGRL 241 Query: 234 SRQSAWQVLQDAAERAGITSGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIY 293 SRQSAW VL+ AAERAG+ + VSPH LRH FATHLL GGADVRVVQELLGHASVTTTQ+Y Sbjct: 242 SRQSAWAVLKRAAERAGLEADVSPHTLRHCFATHLLAGGADVRVVQELLGHASVTTTQVY 301 Query: 294 TLVTVHALREVWAGAHPRA 312 TLVTV +LREV++ AHPRA Sbjct: 302 TLVTVDSLREVYSAAHPRA 320 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,050,553,681 Number of extensions: 76907409 Number of successful extensions: 196347 Number of sequences better than 10.0: 10449 Number of HSP's gapped: 188219 Number of HSP's successfully gapped: 10550 Length of query: 313 Length of database: 3,846,993,858 Length adjustment: 137 Effective length of query: 176 Effective length of database: 2,302,291,047 Effective search space: 405203224272 Effective search space used: 405203224272 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 80 (35.4 bits)